AlfalfaGEDB | MS.gene014243

M. sativa cultivar XinJiangDaYe / MS.gene014243

KEGG: -
GO: GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005575 GO:0005634 GO:0006355 GO:0008150 GO:0008270 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0045893 GO:0045935 GO:0046872 GO:0046914 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0110165 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141
PFAM: PF00320.30

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene014243.t1	AES74247.2	93.7	301	15	1	1	297	15	315	1.00E-142	516.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene014243.t1	Q9FH57	38.1	315	148	7	8	278	5	316	1.4e-39	164.9

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene014243.t1	G7J7S1	93.7	301	15	1	1	297	15	315	7.5e-143	516.2

TFs/TRs:

Gene ID	Type	Classification
MS.gene014243.t1	TF	C2C2-GATA

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene014243.t1	MTR_3g117380	94.020	301	14	1	1	297	15	315	0.0	537
MS.gene014243.t1	MTR_4g071590	56.051	314	101	8	1	296	1	295	1.15e-101	300
MS.gene014243.t1	MTR_4g471590	56.051	314	101	8	1	296	1	295	1.15e-101	300
MS.gene014243.t1	MTR_8g076340	41.135	282	136	8	21	287	25	291	6.17e-54	177
MS.gene014243.t1	MTR_3g109760	40.824	267	127	8	36	281	21	277	2.57e-46	158
MS.gene014243.t1	MTR_8g013950	37.868	272	130	7	39	280	33	295	2.67e-46	159
MS.gene014243.t1	MTR_5g021340	39.198	324	152	9	1	282	51	371	9.43e-46	159
MS.gene014243.t1	MTR_1g006650	34.653	303	153	8	18	281	8	304	3.29e-42	148
MS.gene014243.t1	MTR_1g046680	62.637	91	34	0	190	280	151	241	3.75e-34	125
MS.gene014243.t1	MTR_1g094930	76.923	65	15	0	211	275	147	211	2.66e-33	122
MS.gene014243.t1	MTR_1g116010	35.714	224	97	6	93	275	11	228	3.70e-33	122
MS.gene014243.t1	MTR_1g094930	76.923	65	15	0	211	275	242	306	1.09e-32	123
MS.gene014243.t1	MTR_6g032830	37.004	227	81	9	107	275	34	256	2.05e-32	120
MS.gene014243.t1	MTR_2g094600	68.493	73	23	0	203	275	208	280	4.62e-32	121
MS.gene014243.t1	MTR_7g085410	38.017	242	95	10	80	275	20	252	7.84e-32	119
MS.gene014243.t1	MTR_4g058910	73.134	67	18	0	211	277	314	380	9.07e-31	119
MS.gene014243.t1	MTR_5g007600	63.636	77	28	0	202	278	250	326	2.74e-29	114
MS.gene014243.t1	MTR_5g007600	33.333	249	132	6	42	282	6	228	2.18e-27	108
MS.gene014243.t1	MTR_7g446110	58.730	63	26	0	210	272	186	248	3.12e-21	90.9
MS.gene014243.t1	MTR_7g445950	32.386	176	92	6	100	272	30	181	1.43e-19	84.7
MS.gene014243.t1	MTR_7g445980	56.923	65	27	1	209	272	31	95	1.50e-19	82.0
MS.gene014243.t1	MTR_7g446070	31.844	179	107	6	100	276	30	195	2.45e-19	84.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene014243.t1	AT4G36240	43.426	251	101	7	40	278	10	231	7.14e-53	173
MS.gene014243.t1	AT5G66320	39.683	315	143	9	8	278	5	316	1.60e-49	167
MS.gene014243.t1	AT5G66320	39.683	315	143	9	8	278	5	316	1.60e-49	167
MS.gene014243.t1	AT4G32890	40.426	282	129	14	21	280	2	266	6.01e-47	160
MS.gene014243.t1	AT4G34680	42.123	292	114	11	6	286	7	254	1.61e-46	157
MS.gene014243.t1	AT4G34680	42.123	292	114	11	6	286	7	254	1.61e-46	157
MS.gene014243.t1	AT5G25830	38.596	285	122	13	40	280	13	288	4.40e-42	148
MS.gene014243.t1	AT3G60530	45.745	188	74	5	94	278	63	225	1.20e-41	144
MS.gene014243.t1	AT2G45050	40.000	210	93	5	87	281	58	249	6.96e-39	137
MS.gene014243.t1	AT3G51080	70.000	90	23	2	211	296	221	310	1.83e-36	132
MS.gene014243.t1	AT3G54810	73.529	68	18	0	211	278	229	296	4.59e-32	121
MS.gene014243.t1	AT3G54810	73.529	68	18	0	211	278	229	296	4.59e-32	121
MS.gene014243.t1	AT3G24050	65.476	84	28	1	194	277	178	260	4.99e-32	120
MS.gene014243.t1	AT1G08010	63.636	77	28	0	201	277	210	286	4.20e-31	118
MS.gene014243.t1	AT1G08010	63.636	77	28	0	201	277	210	286	4.20e-31	118
MS.gene014243.t1	AT1G08010	63.636	77	28	0	201	277	210	286	4.20e-31	118
MS.gene014243.t1	AT1G08000	56.383	94	34	1	191	277	191	284	1.17e-29	114
MS.gene014243.t1	AT1G08000	56.383	94	34	1	191	277	191	284	1.17e-29	114
MS.gene014243.t1	AT3G45170	55.422	83	37	0	196	278	100	182	2.17e-27	106
MS.gene014243.t1	AT2G28340	61.538	65	25	0	213	277	193	257	5.94e-25	101

Find 83 sgRNAs with CRISPR-Local

Find 112 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GTTGTAACTGACCCTCTTCT+TGG	0.222887	3.3:-95334137	None:intergenic
GAGTAATTCGGTTGAGAAAA+TGG	0.282779	3.3:-95333723	None:intergenic
TTCTCATCTCCAACACTTTA+CGG	0.294944	3.3:-95334332	None:intergenic
CAACACTTTACGGTGGCTAT+TGG	0.312622	3.3:-95334322	None:intergenic
CTCAGCAAGTGGTAACCATT+TGG	0.349550	3.3:-95334401	None:intergenic
GAAAACCCAACCCTCGCGTT+TGG	0.352223	3.3:+95334025	MS.gene014243:CDS
ACCGCCAACACGGTGGTTGC+CGG	0.362678	3.3:+95333539	MS.gene014243:CDS
TTCTTGGGCCTCAAGAGCCT+CGG	0.380431	3.3:-95334121	None:intergenic
GGATGATGACGTGGCAGGTC+TGG	0.383333	3.3:+95333831	MS.gene014243:intron
TGGACCGGAACCCGGTTTAC+CGG	0.387691	3.3:+95334371	MS.gene014243:CDS
TTGGGTCTGAGCCGGTAAAC+CGG	0.389320	3.3:-95334382	None:intergenic
TGAGCCCAAACGCGAGGGTT+GGG	0.405637	3.3:-95334030	None:intergenic
AAAACCCAACCCTCGCGTTT+GGG	0.407277	3.3:+95334026	MS.gene014243:CDS
GTGTTGGTTTGAATTTGAAC+CGG	0.408949	3.3:-95333907	None:intergenic
TGAATTTCACTGCTGAAAGT+TGG	0.418828	3.3:-95334297	None:intergenic
TTGTAACTGACCCTCTTCTT+GGG	0.419497	3.3:-95334136	None:intergenic
GGGTAGAGAAGAGATAGTTC+TGG	0.431245	3.3:-95333886	None:intergenic
TCAGCAAGTGGTAACCATTT+GGG	0.434470	3.3:-95334400	None:intergenic
GAATTTCACTGCTGAAAGTT+GGG	0.435175	3.3:-95334296	None:intergenic
ACTGCTGAAAGTTGGGCTAC+AGG	0.440191	3.3:-95334289	None:intergenic
TGCGGGGTTCGTTATAAATC+AGG	0.450021	3.3:+95334240	MS.gene014243:CDS
ACTCACGGGAACGAGTAATT+CGG	0.455413	3.3:-95333735	None:intergenic
CTGAGCCCAAACGCGAGGGT+TGG	0.457925	3.3:-95334031	None:intergenic
TGAGCCGGTAAACCGGGTTC+CGG	0.459738	3.3:-95334375	None:intergenic
CAGTGGAGAACCGGTCCGTT+GGG	0.465140	3.3:+95334195	MS.gene014243:CDS
AAGACGCCGCAGTGGAGAAC+CGG	0.467079	3.3:+95334186	MS.gene014243:CDS
CTTTGAAACCGAGTTTAAGA+AGG	0.468143	3.3:+95333471	MS.gene014243:CDS
AAACCCTTTGTAACGCGTGC+GGG	0.468327	3.3:+95334223	MS.gene014243:CDS
ACCGGCAACCACCGTGTTGG+CGG	0.469757	3.3:-95333540	None:intergenic
CTTCACGGTTCTGGTCTTCG+TGG	0.473101	3.3:-95333998	None:intergenic
TCTTGGGCCTCAAGAGCCTC+GGG	0.483424	3.3:-95334120	None:intergenic
GGTAGAGAAGAGATAGTTCT+GGG	0.490371	3.3:-95333885	None:intergenic
TTCTTCTGTTTCTTCGCTGG+TGG	0.490862	3.3:-95334093	None:intergenic
ACTGCGGCGTCTTCTGCACC+TGG	0.496651	3.3:-95334176	None:intergenic
GCAGTGGAGAACCGGTCCGT+TGG	0.505231	3.3:+95334194	MS.gene014243:CDS
CTCCTTGACTTCTCTAACGG+CGG	0.512576	3.3:+95333584	MS.gene014243:CDS
ATGACGTGGCAGGTCTGGAA+TGG	0.521490	3.3:+95333836	MS.gene014243:CDS
AACCCCGCACGCGTTACAAA+GGG	0.526943	3.3:-95334226	None:intergenic
TGAGAAAATGGAAGAATCAA+AGG	0.527539	3.3:-95333711	None:intergenic
AAGTGTTGGAGATGAGAAAG+AGG	0.539631	3.3:+95334337	MS.gene014243:CDS
ACGACGGTGTAGTCATTGCC+AGG	0.543797	3.3:+95334158	MS.gene014243:CDS
CTGAAAGTTGGGCTACAGGC+CGG	0.545068	3.3:-95334285	None:intergenic
TGGGTCTGAGCCGGTAAACC+GGG	0.551116	3.3:-95334381	None:intergenic
GGAATGGTTGGACCGGAACC+CGG	0.552734	3.3:+95334363	MS.gene014243:CDS
GAGGAAAGGAATGGTTGGAC+CGG	0.555733	3.3:+95334356	MS.gene014243:CDS
AACCCTTTGTAACGCGTGCG+GGG	0.556096	3.3:+95334224	MS.gene014243:CDS
CAATAGCCACCGTAAAGTGT+TGG	0.557110	3.3:+95334323	MS.gene014243:CDS
AGAAAGAGGAAAGGAATGGT+TGG	0.560194	3.3:+95334351	MS.gene014243:CDS
ACAAACTCCCTTCTTAAACT+CGG	0.560314	3.3:-95333479	None:intergenic
GAACCCCGCACGCGTTACAA+AGG	0.560484	3.3:-95334227	None:intergenic
TTACAGGATGATGACGTGGC+AGG	0.560919	3.3:+95333826	MS.gene014243:intron
GCTCTTGAGGCCCAAGAAGA+GGG	0.561687	3.3:+95334126	MS.gene014243:CDS
GTAACCATTTGGGTCTGAGC+CGG	0.562666	3.3:-95334390	None:intergenic
TTGGAGATGAGAAAGAGGAA+AGG	0.563009	3.3:+95334342	MS.gene014243:CDS
GGGCGCTGAGCCCAAACGCG+AGG	0.563588	3.3:-95334036	None:intergenic
TTTGAAACCGAGTTTAAGAA+GGG	0.567414	3.3:+95333472	MS.gene014243:CDS
GGCTCTTGAGGCCCAAGAAG+AGG	0.567428	3.3:+95334125	MS.gene014243:CDS
GAAGTCAAGGAGGTCGTCAA+CGG	0.569324	3.3:-95333573	None:intergenic
CACCGCCGTTAGAGAAGTCA+AGG	0.571693	3.3:-95333586	None:intergenic
ATCTTCTGAGAGTGATTGAG+AGG	0.572536	3.3:-95333663	None:intergenic
TTTACCGGCTCAGACCCAAA+TGG	0.575540	3.3:+95334386	MS.gene014243:CDS
TGTTGGTTTGAATTTGAACC+GGG	0.578403	3.3:-95333906	None:intergenic
GATGAGAAAGAGGAAAGGAA+TGG	0.578460	3.3:+95334347	MS.gene014243:CDS
TGACGTGGCAGGTCTGGAAT+GGG	0.589105	3.3:+95333837	MS.gene014243:CDS
TCTCTTCTTCATCTCCGTCG+TGG	0.602523	3.3:-95333619	None:intergenic
AGAATCAAAGGAAGCGTCGG+TGG	0.602647	3.3:-95333699	None:intergenic
GGCGCTGAGCCCAAACGCGA+GGG	0.608307	3.3:-95334035	None:intergenic
GGAAGAATCAAAGGAAGCGT+CGG	0.616525	3.3:-95333702	None:intergenic
TTCACCGGCAACCACCGTGT+TGG	0.618211	3.3:-95333543	None:intergenic
CAATTTACAGGATGATGACG+TGG	0.618285	3.3:+95333822	MS.gene014243:intron
CTAATGAATGACTCAGCAAG+TGG	0.621278	3.3:-95334412	None:intergenic
AGGTGCAGAAGACGCCGCAG+TGG	0.632590	3.3:+95334178	MS.gene014243:CDS
AGAACTATCTCTTCTCTACC+CGG	0.632934	3.3:+95333888	MS.gene014243:CDS
GGGTTCGTTATAAATCAGGT+CGG	0.635663	3.3:+95334244	MS.gene014243:CDS
GTCAACGGAGAAATCTTCAC+CGG	0.637583	3.3:-95333558	None:intergenic
GACCTCCTTGACTTCTCTAA+CGG	0.644071	3.3:+95333581	MS.gene014243:CDS
AAAACCCTTTGTAACGCGTG+CGG	0.650760	3.3:+95334222	MS.gene014243:CDS
TCATCTCCAACACTTTACGG+TGG	0.668782	3.3:-95334329	None:intergenic
AACGGACCGGTTCTCCACTG+CGG	0.699688	3.3:-95334192	None:intergenic
TAGCTTCACCGCCAACACGG+TGG	0.733444	3.3:+95333532	MS.gene014243:CDS
CGCCGTTAGAGAAGTCAAGG+AGG	0.737377	3.3:-95333583	None:intergenic
AAGAGGGTCAGTTACAACGA+CGG	0.739560	3.3:+95334142	MS.gene014243:CDS
GGTGATATTCTTCACCACGA+CGG	0.777931	3.3:+95333605	MS.gene014243:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TAGTAATTGAAATTGAAATT+GGG	+	chr3.3:95333795-95333814	MS.gene014243:intron	15.0%
!!	TTAGTAATTGAAATTGAAAT+TGG	+	chr3.3:95333794-95333813	MS.gene014243:intron	15.0%
!!	TTTCAATTACTAATACAAAA+CGG	-	chr3.3:95333787-95333806	None:intergenic	15.0%
!!	AGTAATTGAAATTGAAATTG+GGG	+	chr3.3:95333796-95333815	MS.gene014243:intron	20.0%
!	GTAATTGAAATTGAAATTGG+GGG	+	chr3.3:95333797-95333816	MS.gene014243:intron	25.0%
	TGAGAAAATGGAAGAATCAA+AGG	-	chr3.3:95333714-95333733	None:intergenic	30.0%
!	TTTGAAACCGAGTTTAAGAA+GGG	+	chr3.3:95333472-95333491	MS.gene014243:CDS	30.0%
!!	TTTGTTTTTCAGCAAACTCT+CGG	+	chr3.3:95333497-95333516	MS.gene014243:CDS	30.0%
	AAATTGGGGGTTCAATTTAC+AGG	+	chr3.3:95333810-95333829	MS.gene014243:intron	35.0%
	AACGAAGAGAGAAAAACTCA+CGG	-	chr3.3:95333753-95333772	None:intergenic	35.0%
	ACAAACTCCCTTCTTAAACT+CGG	-	chr3.3:95333482-95333501	None:intergenic	35.0%
	CAAAAACATGAAACTCAGCA+TGG	+	chr3.3:95333937-95333956	MS.gene014243:CDS	35.0%
	GAATTTCACTGCTGAAAGTT+GGG	-	chr3.3:95334299-95334318	None:intergenic	35.0%
	GAGTAATTCGGTTGAGAAAA+TGG	-	chr3.3:95333726-95333745	None:intergenic	35.0%
	TGAATTTCACTGCTGAAAGT+TGG	-	chr3.3:95334300-95334319	None:intergenic	35.0%
	TTCTCATCTCCAACACTTTA+CGG	-	chr3.3:95334335-95334354	None:intergenic	35.0%
!	GTTGGGTTTTCTATTCTTCA+CGG	-	chr3.3:95334016-95334035	None:intergenic	35.0%
!	TTTTCTATTCTTCACGGTTC+TGG	-	chr3.3:95334010-95334029	None:intergenic	35.0%
!!	CTTTGAAACCGAGTTTAAGA+AGG	+	chr3.3:95333471-95333490	MS.gene014243:CDS	35.0%
!!	GTGTTGGTTTGAATTTGAAC+CGG	-	chr3.3:95333910-95333929	None:intergenic	35.0%
!!	TGCTGAGTTTCATGTTTTTG+AGG	-	chr3.3:95333937-95333956	None:intergenic	35.0%
!!	TGTTGGTTTGAATTTGAACC+GGG	-	chr3.3:95333909-95333928	None:intergenic	35.0%
!!	TTTTTCTTCTGTTTCTTCGC+TGG	-	chr3.3:95334099-95334118	None:intergenic	35.0%
!!!	TAAATCAGGTCGGCTTTTTT+CGG	+	chr3.3:95334254-95334273	MS.gene014243:CDS	35.0%
	ACGAAGAGAGAAAAACTCAC+GGG	-	chr3.3:95333752-95333771	None:intergenic	40.0%
	AGAAAGAGGAAAGGAATGGT+TGG	+	chr3.3:95334351-95334370	MS.gene014243:CDS	40.0%
	AGAACTATCTCTTCTCTACC+CGG	+	chr3.3:95333888-95333907	MS.gene014243:CDS	40.0%
	GATGAGAAAGAGGAAAGGAA+TGG	+	chr3.3:95334347-95334366	MS.gene014243:CDS	40.0%
	GGGTTCGTTATAAATCAGGT+CGG	+	chr3.3:95334244-95334263	MS.gene014243:CDS	40.0%
	GGTAGAGAAGAGATAGTTCT+GGG	-	chr3.3:95333888-95333907	None:intergenic	40.0%
	TCAGCAAGTGGTAACCATTT+GGG	-	chr3.3:95334403-95334422	None:intergenic	40.0%
	TTGGAGATGAGAAAGAGGAA+AGG	+	chr3.3:95334342-95334361	MS.gene014243:CDS	40.0%
	TTGTAACTGACCCTCTTCTT+GGG	-	chr3.3:95334139-95334158	None:intergenic	40.0%
!	ATCTTCTGAGAGTGATTGAG+AGG	-	chr3.3:95333666-95333685	None:intergenic	40.0%
!	CAATTTACAGGATGATGACG+TGG	+	chr3.3:95333822-95333841	MS.gene014243:intron	40.0%
!!	AAGTGTTGGAGATGAGAAAG+AGG	+	chr3.3:95334337-95334356	MS.gene014243:CDS	40.0%
!!	ATGTTTTTGAGGACACGTGT+TGG	-	chr3.3:95333926-95333945	None:intergenic	40.0%
!!!	GCTTTTTTCGGAGTATAGAC+CGG	+	chr3.3:95334266-95334285	MS.gene014243:CDS	40.0%
	AAAACCCTTTGTAACGCGTG+CGG	+	chr3.3:95334222-95334241	MS.gene014243:CDS	45.0%
	AAGAGGGTCAGTTACAACGA+CGG	+	chr3.3:95334142-95334161	MS.gene014243:CDS	45.0%
	ACAGACGGTGACCGAAAAAA+CGG	-	chr3.3:95334060-95334079	None:intergenic	45.0%
	ACTCACGGGAACGAGTAATT+CGG	-	chr3.3:95333738-95333757	None:intergenic	45.0%
	CAACACTTTACGGTGGCTAT+TGG	-	chr3.3:95334325-95334344	None:intergenic	45.0%
	CAATAGCCACCGTAAAGTGT+TGG	+	chr3.3:95334323-95334342	MS.gene014243:CDS	45.0%
	GAAACAGAAGAAAAAGCCCG+AGG	+	chr3.3:95334104-95334123	MS.gene014243:CDS	45.0%
	GACCTCCTTGACTTCTCTAA+CGG	+	chr3.3:95333581-95333600	MS.gene014243:CDS	45.0%
	GGGTAGAGAAGAGATAGTTC+TGG	-	chr3.3:95333889-95333908	None:intergenic	45.0%
	GGTGATATTCTTCACCACGA+CGG	+	chr3.3:95333605-95333624	MS.gene014243:CDS	45.0%
	GTCAACGGAGAAATCTTCAC+CGG	-	chr3.3:95333561-95333580	None:intergenic	45.0%
	GTTGTAACTGACCCTCTTCT+TGG	-	chr3.3:95334140-95334159	None:intergenic	45.0%
	TCATCTCCAACACTTTACGG+TGG	-	chr3.3:95334332-95334351	None:intergenic	45.0%
	TGCGGGGTTCGTTATAAATC+AGG	+	chr3.3:95334240-95334259	MS.gene014243:CDS	45.0%
!	GGAAGAATCAAAGGAAGCGT+CGG	-	chr3.3:95333705-95333724	None:intergenic	45.0%
!	TTCTTCTGTTTCTTCGCTGG+TGG	-	chr3.3:95334096-95334115	None:intergenic	45.0%
!!	CAAAGGGTTTTAGCACCCAA+CGG	-	chr3.3:95334213-95334232	None:intergenic	45.0%
!!!	GGTCACCGTCTGTTGTTTTT+GGG	+	chr3.3:95334067-95334086	MS.gene014243:CDS	45.0%
!!!	GTCACCGTCTGTTGTTTTTG+GGG	+	chr3.3:95334068-95334087	MS.gene014243:CDS	45.0%
!!!	TCACCGTCTGTTGTTTTTGG+GGG	+	chr3.3:95334069-95334088	MS.gene014243:CDS	45.0%
!!!	TTTTAGCTTCACCGCCAACA+CGG	+	chr3.3:95333529-95333548	MS.gene014243:CDS	45.0%
	AAAACCCAACCCTCGCGTTT+GGG	+	chr3.3:95334026-95334045	MS.gene014243:CDS	50.0%
	AAACCCTTTGTAACGCGTGC+GGG	+	chr3.3:95334223-95334242	MS.gene014243:CDS	50.0%
	ACTGCTGAAAGTTGGGCTAC+AGG	-	chr3.3:95334292-95334311	None:intergenic	50.0%
	CAGACGGTGACCGAAAAAAC+GGG	-	chr3.3:95334059-95334078	None:intergenic	50.0%
	CTCCTTGACTTCTCTAACGG+CGG	+	chr3.3:95333584-95333603	MS.gene014243:CDS	50.0%
	GAAGTCAAGGAGGTCGTCAA+CGG	-	chr3.3:95333576-95333595	None:intergenic	50.0%
	GAGGAAAGGAATGGTTGGAC+CGG	+	chr3.3:95334356-95334375	MS.gene014243:CDS	50.0%
	GGTCCCCCAAAAACAACAGA+CGG	-	chr3.3:95334075-95334094	None:intergenic	50.0%
	GTAACCATTTGGGTCTGAGC+CGG	-	chr3.3:95334393-95334412	None:intergenic	50.0%
	TCTCTTCTTCATCTCCGTCG+TGG	-	chr3.3:95333622-95333641	None:intergenic	50.0%
!	TTACAGGATGATGACGTGGC+AGG	+	chr3.3:95333826-95333845	MS.gene014243:intron	50.0%
!	TTTTCAGCAAACTCTCGGCG+AGG	+	chr3.3:95333502-95333521	MS.gene014243:CDS	50.0%
!!	AGAATCAAAGGAAGCGTCGG+TGG	-	chr3.3:95333702-95333721	None:intergenic	50.0%
!!	TTTACCGGCTCAGACCCAAA+TGG	+	chr3.3:95334386-95334405	MS.gene014243:CDS	50.0%
!!!	CGGTCACCGTCTGTTGTTTT+TGG	+	chr3.3:95334066-95334085	MS.gene014243:CDS	50.0%
	AACCCCGCACGCGTTACAAA+GGG	-	chr3.3:95334229-95334248	None:intergenic	55.0%
	AACCCTTTGTAACGCGTGCG+GGG	+	chr3.3:95334224-95334243	MS.gene014243:CDS	55.0%
	ACGACGGTGTAGTCATTGCC+AGG	+	chr3.3:95334158-95334177	MS.gene014243:CDS	55.0%
	ATGACGTGGCAGGTCTGGAA+TGG	+	chr3.3:95333836-95333855	MS.gene014243:CDS	55.0%
	CACCGCCGTTAGAGAAGTCA+AGG	-	chr3.3:95333589-95333608	None:intergenic	55.0%
	CGCCGTTAGAGAAGTCAAGG+AGG	-	chr3.3:95333586-95333605	None:intergenic	55.0%
	CTGAAAGTTGGGCTACAGGC+CGG	-	chr3.3:95334288-95334307	None:intergenic	55.0%
	GAAAAAGCCCGAGGCTCTTG+AGG	+	chr3.3:95334113-95334132	MS.gene014243:CDS	55.0%
	GAAAACCCAACCCTCGCGTT+TGG	+	chr3.3:95334025-95334044	MS.gene014243:CDS	55.0%
	GCTCTTGAGGCCCAAGAAGA+GGG	+	chr3.3:95334126-95334145	MS.gene014243:CDS	55.0%
	TTCTTGGGCCTCAAGAGCCT+CGG	-	chr3.3:95334124-95334143	None:intergenic	55.0%
	TTGGGTCTGAGCCGGTAAAC+CGG	-	chr3.3:95334385-95334404	None:intergenic	55.0%
!	CTTCACGGTTCTGGTCTTCG+TGG	-	chr3.3:95334001-95334020	None:intergenic	55.0%
!	TGACGTGGCAGGTCTGGAAT+GGG	+	chr3.3:95333837-95333856	MS.gene014243:CDS	55.0%
!!	GGTTTTAGCACCCAACGGAC+CGG	-	chr3.3:95334208-95334227	None:intergenic	55.0%
	AAGACGCCGCAGTGGAGAAC+CGG	+	chr3.3:95334186-95334205	MS.gene014243:CDS	60.0%
	CAGTGGAGAACCGGTCCGTT+GGG	+	chr3.3:95334195-95334214	MS.gene014243:CDS	60.0%
	GAACCCCGCACGCGTTACAA+AGG	-	chr3.3:95334230-95334249	None:intergenic	60.0%
	GGAATGGTTGGACCGGAACC+CGG	+	chr3.3:95334363-95334382	MS.gene014243:CDS	60.0%
	GGCTCTTGAGGCCCAAGAAG+AGG	+	chr3.3:95334125-95334144	MS.gene014243:CDS	60.0%
	TAGCTTCACCGCCAACACGG+TGG	+	chr3.3:95333532-95333551	MS.gene014243:CDS	60.0%
	TCTTGGGCCTCAAGAGCCTC+GGG	-	chr3.3:95334123-95334142	None:intergenic	60.0%
	TGAGCCCAAACGCGAGGGTT+GGG	-	chr3.3:95334033-95334052	None:intergenic	60.0%
	TGAGCCGGTAAACCGGGTTC+CGG	-	chr3.3:95334378-95334397	None:intergenic	60.0%
	TGGACCGGAACCCGGTTTAC+CGG	+	chr3.3:95334371-95334390	MS.gene014243:CDS	60.0%
	TGGGTCTGAGCCGGTAAACC+GGG	-	chr3.3:95334384-95334403	None:intergenic	60.0%
	TTCACCGGCAACCACCGTGT+TGG	-	chr3.3:95333546-95333565	None:intergenic	60.0%
!	AACGGACCGGTTCTCCACTG+CGG	-	chr3.3:95334195-95334214	None:intergenic	60.0%
!	GGATGATGACGTGGCAGGTC+TGG	+	chr3.3:95333831-95333850	MS.gene014243:intron	60.0%
!!!	GGGCTCAGCGCCCGTTTTTT+CGG	+	chr3.3:95334046-95334065	MS.gene014243:CDS	60.0%
	ACCGCCAACACGGTGGTTGC+CGG	+	chr3.3:95333539-95333558	MS.gene014243:CDS	65.0%
	ACCGGCAACCACCGTGTTGG+CGG	-	chr3.3:95333543-95333562	None:intergenic	65.0%
	ACTGCGGCGTCTTCTGCACC+TGG	-	chr3.3:95334179-95334198	None:intergenic	65.0%
	AGGTGCAGAAGACGCCGCAG+TGG	+	chr3.3:95334178-95334197	MS.gene014243:CDS	65.0%
	CTGAGCCCAAACGCGAGGGT+TGG	-	chr3.3:95334034-95334053	None:intergenic	65.0%
	GCAGTGGAGAACCGGTCCGT+TGG	+	chr3.3:95334194-95334213	MS.gene014243:CDS	65.0%
!	GGCGCTGAGCCCAAACGCGA+GGG	-	chr3.3:95334038-95334057	None:intergenic	70.0%
!!	GGGCGCTGAGCCCAAACGCG+AGG	-	chr3.3:95334039-95334058	None:intergenic	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.3	gene	95333449	95334422	95333449	ID=MS.gene014243
chr3.3	mRNA	95333449	95334422	95333449	ID=MS.gene014243.t1;Parent=MS.gene014243
chr3.3	exon	95333449	95333751	95333449	ID=MS.gene014243.t1.exon1;Parent=MS.gene014243.t1
chr3.3	CDS	95333449	95333751	95333449	ID=cds.MS.gene014243.t1;Parent=MS.gene014243.t1
chr3.3	exon	95333832	95334422	95333832	ID=MS.gene014243.t1.exon2;Parent=MS.gene014243.t1
chr3.3	CDS	95333832	95334422	95333832	ID=cds.MS.gene014243.t1;Parent=MS.gene014243.t1

Gene Sequence

>MS.gene014243

ATGGAGTTTGCAGTAGCAAAAGCTTTGAAACCGAGTTTAAGAAGGGAGTTTGTTTTTCAGCAAACTCTCGGCGAGGAACTTTTTAGCTTCACCGCCAACACGGTGGTTGCCGGTGAAGATTTCTCCGTTGACGACCTCCTTGACTTCTCTAACGGCGGTGATATTCTTCACCACGACGGAGATGAAGAAGAGAAAGATAGCAGTTTATCTCTTTCCTCTCAATCACTCTCAGAAGATAACAACTCAAATTCCACCGACGCTTCCTTTGATTCTTCCATTTTCTCAACCGAATTACTCGTTCCCGTGAGTTTTTCTCTCTTCGTTTCTTTTTCTCTCCGTTTTGTATTAGTAATTGAAATTGAAATTGGGGGTTCAATTTACAGGATGATGACGTGGCAGGTCTGGAATGGGTTTCACACTTTGTAGATGATTCTCTCCCAGAACTATCTCTTCTCTACCCGGTTCAAATTCAAACCAACACGTGTCCTCAAAAACATGAAACTCAGCATGGAAAAACTTTACGTTTTTCAACTGAAAAAATGAAAATTACCACGAAGACCAGAACCGTGAAGAATAGAAAACCCAACCCTCGCGTTTGGGCTCAGCGCCCGTTTTTTCGGTCACCGTCTGTTGTTTTTGGGGGACCACCAGCGAAGAAACAGAAGAAAAAGCCCGAGGCTCTTGAGGCCCAAGAAGAGGGTCAGTTACAACGACGGTGTAGTCATTGCCAGGTGCAGAAGACGCCGCAGTGGAGAACCGGTCCGTTGGGTGCTAAAACCCTTTGTAACGCGTGCGGGGTTCGTTATAAATCAGGTCGGCTTTTTTCGGAGTATAGACCGGCCTGTAGCCCAACTTTCAGCAGTGAAATTCATTCCAATAGCCACCGTAAAGTGTTGGAGATGAGAAAGAGGAAAGGAATGGTTGGACCGGAACCCGGTTTACCGGCTCAGACCCAAATGGTTACCACTTGCTGA

Protein sequence

>MS.gene014243.t1

MEFAVAKALKPSLRREFVFQQTLGEELFSFTANTVVAGEDFSVDDLLDFSNGGDILHHDGDEEEKDSSLSLSSQSLSEDNNSNSTDASFDSSIFSTELLVPDDDVAGLEWVSHFVDDSLPELSLLYPVQIQTNTCPQKHETQHGKTLRFSTEKMKITTKTRTVKNRKPNPRVWAQRPFFRSPSVVFGGPPAKKQKKKPEALEAQEEGQLQRRCSHCQVQKTPQWRTGPLGAKTLCNACGVRYKSGRLFSEYRPACSPTFSSEIHSNSHRKVLEMRKRKGMVGPEPGLPAQTQMVTTC