Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene014272.t1 | XP_013462329.1 | 85.1 | 410 | 46 | 4 | 1 | 407 | 1 | 398 | 5.90E-181 | 643.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene014272.t1 | Q9CAA9 | 50.0 | 214 | 81 | 7 | 194 | 406 | 297 | 485 | 8.4e-43 | 176.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene014272.t1 | A0A072V302 | 85.1 | 410 | 46 | 4 | 1 | 407 | 1 | 398 | 4.3e-181 | 643.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene014272.t1 | TF | bHLH |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene014272.t1 | MTR_3g116770 | 90.732 | 410 | 23 | 4 | 1 | 407 | 1 | 398 | 0.0 | 761 |
MS.gene014272.t1 | MTR_3g116770 | 90.488 | 410 | 23 | 5 | 1 | 407 | 1 | 397 | 0.0 | 755 |
MS.gene014272.t1 | MTR_4g070320 | 52.745 | 419 | 111 | 20 | 1 | 407 | 1 | 344 | 1.80e-120 | 353 |
MS.gene014272.t1 | MTR_5g048860 | 43.003 | 293 | 134 | 9 | 118 | 407 | 296 | 558 | 3.84e-58 | 199 |
MS.gene014272.t1 | MTR_7g053410 | 43.643 | 291 | 142 | 8 | 114 | 396 | 235 | 511 | 8.85e-52 | 181 |
MS.gene014272.t1 | MTR_7g053410 | 43.643 | 291 | 142 | 8 | 114 | 396 | 235 | 511 | 1.47e-51 | 181 |
MS.gene014272.t1 | MTR_8g012290 | 42.581 | 310 | 140 | 11 | 114 | 407 | 211 | 498 | 9.20e-51 | 178 |
MS.gene014272.t1 | MTR_8g012290 | 41.935 | 310 | 141 | 11 | 114 | 407 | 211 | 497 | 4.89e-50 | 176 |
MS.gene014272.t1 | MTR_8g065740 | 54.491 | 167 | 61 | 2 | 132 | 287 | 230 | 392 | 1.54e-49 | 174 |
MS.gene014272.t1 | MTR_1g017350 | 44.589 | 231 | 91 | 6 | 150 | 380 | 215 | 408 | 7.53e-49 | 171 |
MS.gene014272.t1 | MTR_1g017350 | 44.589 | 231 | 91 | 6 | 150 | 380 | 215 | 408 | 7.95e-49 | 171 |
MS.gene014272.t1 | MTR_1g017350 | 45.022 | 231 | 87 | 6 | 150 | 380 | 215 | 405 | 1.28e-48 | 171 |
MS.gene014272.t1 | MTR_1g017350 | 45.022 | 231 | 87 | 6 | 150 | 380 | 215 | 405 | 1.42e-48 | 170 |
MS.gene014272.t1 | MTR_8g062240 | 70.755 | 106 | 24 | 2 | 197 | 301 | 148 | 247 | 1.60e-41 | 148 |
MS.gene014272.t1 | MTR_5g037250 | 58.273 | 139 | 41 | 3 | 150 | 288 | 73 | 194 | 2.36e-41 | 146 |
MS.gene014272.t1 | MTR_3g498825 | 80.899 | 89 | 17 | 0 | 184 | 272 | 131 | 219 | 4.90e-41 | 148 |
MS.gene014272.t1 | MTR_7g092510 | 61.017 | 118 | 38 | 1 | 176 | 293 | 157 | 266 | 7.04e-41 | 148 |
MS.gene014272.t1 | MTR_8g099880 | 82.558 | 86 | 14 | 1 | 195 | 279 | 140 | 225 | 1.50e-40 | 147 |
MS.gene014272.t1 | MTR_1g059270 | 65.347 | 101 | 35 | 0 | 193 | 293 | 153 | 253 | 9.49e-40 | 144 |
MS.gene014272.t1 | MTR_1g059270 | 67.010 | 97 | 32 | 0 | 193 | 289 | 153 | 249 | 9.82e-40 | 142 |
MS.gene014272.t1 | MTR_6g084120 | 60.227 | 88 | 24 | 2 | 196 | 281 | 151 | 229 | 6.69e-25 | 103 |
MS.gene014272.t1 | MTR_4g131160 | 72.727 | 66 | 17 | 1 | 200 | 265 | 199 | 263 | 2.49e-22 | 98.2 |
MS.gene014272.t1 | MTR_4g131160 | 72.727 | 66 | 17 | 1 | 200 | 265 | 196 | 260 | 2.51e-22 | 98.2 |
MS.gene014272.t1 | MTR_1g080890 | 69.697 | 66 | 19 | 1 | 200 | 265 | 193 | 257 | 3.69e-21 | 94.4 |
MS.gene014272.t1 | MTR_2g098310 | 55.224 | 67 | 30 | 0 | 198 | 264 | 330 | 396 | 1.68e-15 | 78.2 |
MS.gene014272.t1 | MTR_4g065870 | 58.462 | 65 | 27 | 0 | 200 | 264 | 355 | 419 | 1.79e-15 | 78.2 |
MS.gene014272.t1 | MTR_4g033295 | 55.385 | 65 | 29 | 0 | 200 | 264 | 118 | 182 | 3.35e-15 | 73.9 |
MS.gene014272.t1 | MTR_2g098310 | 56.061 | 66 | 29 | 0 | 198 | 263 | 330 | 395 | 4.45e-15 | 77.0 |
MS.gene014272.t1 | MTR_1g084980 | 33.600 | 125 | 76 | 3 | 153 | 274 | 415 | 535 | 6.06e-15 | 77.4 |
MS.gene014272.t1 | MTR_4g033295 | 53.731 | 67 | 30 | 1 | 200 | 265 | 118 | 184 | 6.13e-15 | 73.2 |
MS.gene014272.t1 | MTR_1g069155 | 52.174 | 69 | 32 | 1 | 202 | 270 | 319 | 386 | 6.35e-15 | 77.0 |
MS.gene014272.t1 | MTR_4g065870 | 58.065 | 62 | 26 | 0 | 200 | 261 | 355 | 416 | 9.13e-15 | 75.9 |
MS.gene014272.t1 | MTR_1g052470 | 53.623 | 69 | 32 | 0 | 200 | 268 | 298 | 366 | 1.54e-14 | 75.1 |
MS.gene014272.t1 | MTR_7g092540 | 50.000 | 74 | 37 | 0 | 200 | 273 | 243 | 316 | 2.20e-14 | 73.9 |
MS.gene014272.t1 | MTR_1g070870 | 65.152 | 66 | 22 | 1 | 200 | 265 | 120 | 184 | 2.62e-14 | 73.2 |
MS.gene014272.t1 | MTR_1g070870 | 65.152 | 66 | 22 | 1 | 200 | 265 | 123 | 187 | 2.77e-14 | 73.2 |
MS.gene014272.t1 | MTR_7g092540 | 34.483 | 145 | 82 | 5 | 131 | 263 | 163 | 306 | 8.86e-14 | 72.0 |
MS.gene014272.t1 | MTR_7g099540 | 50.000 | 68 | 33 | 1 | 203 | 270 | 255 | 321 | 2.47e-13 | 71.6 |
MS.gene014272.t1 | MTR_3g028520 | 46.753 | 77 | 41 | 0 | 188 | 264 | 310 | 386 | 5.13e-13 | 70.5 |
MS.gene014272.t1 | MTR_3g027650 | 46.753 | 77 | 41 | 0 | 188 | 264 | 310 | 386 | 5.13e-13 | 70.5 |
MS.gene014272.t1 | MTR_7g110810 | 26.639 | 244 | 143 | 8 | 33 | 276 | 70 | 277 | 2.09e-12 | 68.6 |
MS.gene014272.t1 | MTR_8g036235 | 49.231 | 65 | 33 | 0 | 200 | 264 | 316 | 380 | 2.39e-12 | 68.6 |
MS.gene014272.t1 | MTR_3g027650 | 47.297 | 74 | 39 | 0 | 188 | 261 | 310 | 383 | 2.72e-12 | 68.2 |
MS.gene014272.t1 | MTR_4g107320 | 47.368 | 76 | 38 | 2 | 218 | 291 | 60 | 135 | 2.80e-12 | 64.3 |
MS.gene014272.t1 | MTR_1g019240 | 47.692 | 65 | 33 | 1 | 202 | 266 | 87 | 150 | 3.04e-12 | 67.0 |
MS.gene014272.t1 | MTR_1g018090 | 44.828 | 87 | 45 | 2 | 178 | 264 | 254 | 337 | 4.72e-12 | 67.4 |
MS.gene014272.t1 | MTR_3g449770 | 50.000 | 64 | 31 | 1 | 202 | 265 | 311 | 373 | 1.68e-11 | 66.2 |
MS.gene014272.t1 | MTR_7g099540 | 49.206 | 63 | 31 | 1 | 203 | 265 | 255 | 316 | 1.74e-11 | 65.9 |
MS.gene014272.t1 | MTR_3g103030 | 37.121 | 132 | 72 | 3 | 133 | 264 | 172 | 292 | 2.12e-11 | 65.1 |
MS.gene014272.t1 | MTR_7g111320 | 39.806 | 103 | 57 | 3 | 167 | 265 | 395 | 496 | 2.45e-11 | 65.9 |
MS.gene014272.t1 | MTR_5g017040 | 53.571 | 56 | 25 | 1 | 211 | 266 | 116 | 170 | 7.53e-11 | 63.5 |
MS.gene014272.t1 | MTR_5g005110 | 50.000 | 64 | 31 | 1 | 201 | 264 | 225 | 287 | 8.55e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene014272.t1 | AT4G34530 | 38.544 | 371 | 156 | 12 | 22 | 375 | 15 | 330 | 4.52e-57 | 191 |
MS.gene014272.t1 | AT1G68920 | 47.162 | 229 | 97 | 6 | 161 | 388 | 264 | 469 | 3.43e-53 | 184 |
MS.gene014272.t1 | AT1G68920 | 47.162 | 229 | 97 | 6 | 161 | 388 | 264 | 469 | 3.43e-53 | 184 |
MS.gene014272.t1 | AT1G68920 | 47.162 | 229 | 97 | 6 | 161 | 388 | 264 | 469 | 3.43e-53 | 184 |
MS.gene014272.t1 | AT1G68920 | 47.162 | 229 | 97 | 6 | 161 | 388 | 263 | 468 | 3.58e-53 | 184 |
MS.gene014272.t1 | AT3G07340 | 44.358 | 257 | 127 | 7 | 130 | 383 | 193 | 436 | 1.34e-51 | 179 |
MS.gene014272.t1 | AT2G18300 | 52.970 | 202 | 75 | 7 | 90 | 289 | 91 | 274 | 2.65e-51 | 175 |
MS.gene014272.t1 | AT3G07340 | 56.790 | 162 | 65 | 3 | 130 | 291 | 193 | 349 | 3.34e-51 | 178 |
MS.gene014272.t1 | AT2G18300 | 53.535 | 198 | 72 | 7 | 90 | 285 | 91 | 270 | 1.42e-50 | 174 |
MS.gene014272.t1 | AT2G18300 | 53.535 | 198 | 72 | 7 | 90 | 285 | 91 | 270 | 3.25e-50 | 173 |
MS.gene014272.t1 | AT4G36540 | 42.857 | 280 | 97 | 12 | 22 | 289 | 2 | 230 | 3.69e-50 | 171 |
MS.gene014272.t1 | AT4G36540 | 43.116 | 276 | 94 | 12 | 22 | 285 | 2 | 226 | 2.35e-49 | 169 |
MS.gene014272.t1 | AT1G10120 | 50.000 | 196 | 59 | 5 | 184 | 379 | 190 | 346 | 1.83e-48 | 169 |
MS.gene014272.t1 | AT1G10120 | 50.000 | 196 | 59 | 5 | 184 | 379 | 190 | 346 | 1.83e-48 | 169 |
MS.gene014272.t1 | AT3G23690 | 61.268 | 142 | 50 | 3 | 148 | 287 | 140 | 278 | 1.42e-47 | 167 |
MS.gene014272.t1 | AT5G48560 | 68.595 | 121 | 36 | 2 | 196 | 315 | 297 | 416 | 2.39e-46 | 166 |
MS.gene014272.t1 | AT5G48560 | 68.595 | 121 | 36 | 2 | 196 | 315 | 297 | 416 | 4.51e-46 | 166 |
MS.gene014272.t1 | AT1G26260 | 76.531 | 98 | 23 | 0 | 190 | 287 | 162 | 259 | 8.97e-46 | 161 |
MS.gene014272.t1 | AT1G26260 | 76.531 | 98 | 23 | 0 | 190 | 287 | 191 | 288 | 2.00e-45 | 161 |
MS.gene014272.t1 | AT1G26260 | 76.531 | 98 | 23 | 0 | 190 | 287 | 213 | 310 | 3.33e-45 | 160 |
MS.gene014272.t1 | AT1G26260 | 76.531 | 98 | 23 | 0 | 190 | 287 | 213 | 310 | 3.33e-45 | 160 |
MS.gene014272.t1 | AT1G26260 | 76.531 | 98 | 23 | 0 | 190 | 287 | 213 | 310 | 3.33e-45 | 160 |
MS.gene014272.t1 | AT1G26260 | 76.531 | 98 | 23 | 0 | 190 | 287 | 213 | 310 | 3.33e-45 | 160 |
MS.gene014272.t1 | AT1G59640 | 52.222 | 180 | 62 | 5 | 139 | 316 | 79 | 236 | 1.32e-43 | 153 |
MS.gene014272.t1 | AT5G50915 | 61.832 | 131 | 43 | 3 | 154 | 279 | 88 | 216 | 1.38e-43 | 153 |
MS.gene014272.t1 | AT5G50915 | 61.832 | 131 | 43 | 3 | 154 | 279 | 88 | 216 | 1.38e-43 | 153 |
MS.gene014272.t1 | AT5G50915 | 61.832 | 131 | 43 | 3 | 154 | 279 | 88 | 216 | 4.81e-43 | 152 |
MS.gene014272.t1 | AT5G50915 | 61.832 | 131 | 43 | 3 | 154 | 279 | 88 | 216 | 4.81e-43 | 152 |
MS.gene014272.t1 | AT1G59640 | 55.000 | 160 | 64 | 2 | 139 | 296 | 79 | 232 | 2.18e-42 | 152 |
MS.gene014272.t1 | AT3G57800 | 55.634 | 142 | 55 | 2 | 193 | 327 | 197 | 337 | 1.20e-41 | 151 |
MS.gene014272.t1 | AT2G42300 | 70.968 | 93 | 27 | 0 | 194 | 286 | 179 | 271 | 1.75e-41 | 148 |
MS.gene014272.t1 | AT2G42300 | 63.810 | 105 | 38 | 0 | 194 | 298 | 179 | 283 | 4.12e-40 | 145 |
MS.gene014272.t1 | AT5G62610 | 81.579 | 76 | 14 | 0 | 196 | 271 | 149 | 224 | 4.37e-37 | 136 |
MS.gene014272.t1 | AT5G62610 | 81.579 | 76 | 14 | 0 | 196 | 271 | 149 | 224 | 4.37e-37 | 136 |
MS.gene014272.t1 | AT1G73830 | 49.306 | 144 | 62 | 1 | 134 | 277 | 92 | 224 | 2.96e-35 | 131 |
MS.gene014272.t1 | AT1G73830 | 49.306 | 144 | 62 | 1 | 134 | 277 | 92 | 224 | 3.20e-35 | 130 |
MS.gene014272.t1 | AT1G18400 | 75.000 | 80 | 20 | 0 | 198 | 277 | 143 | 222 | 7.45e-35 | 129 |
MS.gene014272.t1 | AT1G18400 | 75.000 | 80 | 20 | 0 | 198 | 277 | 143 | 222 | 1.67e-34 | 129 |
MS.gene014272.t1 | AT1G25330 | 65.217 | 92 | 32 | 0 | 196 | 287 | 100 | 191 | 1.94e-33 | 125 |
MS.gene014272.t1 | AT3G57800 | 41.799 | 189 | 55 | 3 | 193 | 327 | 197 | 384 | 9.97e-33 | 128 |
MS.gene014272.t1 | AT5G58010 | 64.198 | 81 | 24 | 2 | 199 | 275 | 98 | 177 | 2.58e-23 | 99.4 |
MS.gene014272.t1 | AT2G24260 | 71.212 | 66 | 18 | 1 | 200 | 265 | 35 | 99 | 8.24e-23 | 97.1 |
MS.gene014272.t1 | AT4G30980 | 72.727 | 66 | 17 | 1 | 200 | 265 | 130 | 194 | 1.66e-22 | 97.4 |
MS.gene014272.t1 | AT4G30980 | 72.727 | 66 | 17 | 1 | 200 | 265 | 178 | 242 | 2.77e-22 | 97.8 |
MS.gene014272.t1 | AT2G24260 | 71.212 | 66 | 18 | 1 | 200 | 265 | 138 | 202 | 5.34e-22 | 96.7 |
MS.gene014272.t1 | AT2G42300 | 76.087 | 46 | 11 | 0 | 194 | 239 | 179 | 224 | 5.74e-18 | 82.8 |
MS.gene014272.t1 | AT2G42300 | 76.087 | 46 | 11 | 0 | 194 | 239 | 179 | 224 | 5.74e-18 | 82.8 |
MS.gene014272.t1 | AT2G42300 | 76.087 | 46 | 11 | 0 | 194 | 239 | 179 | 224 | 7.14e-18 | 82.8 |
MS.gene014272.t1 | AT4G28790 | 28.063 | 253 | 116 | 9 | 87 | 335 | 195 | 385 | 1.28e-15 | 78.6 |
MS.gene014272.t1 | AT2G42280 | 37.405 | 131 | 58 | 4 | 144 | 263 | 227 | 344 | 1.64e-15 | 77.8 |
MS.gene014272.t1 | AT2G20180 | 39.806 | 103 | 56 | 2 | 163 | 265 | 175 | 271 | 1.71e-15 | 78.2 |
MS.gene014272.t1 | AT2G20180 | 39.806 | 103 | 56 | 2 | 163 | 265 | 175 | 271 | 1.71e-15 | 78.2 |
MS.gene014272.t1 | AT2G20180 | 39.806 | 103 | 56 | 2 | 163 | 265 | 175 | 271 | 1.71e-15 | 78.2 |
MS.gene014272.t1 | AT2G42280 | 36.434 | 129 | 60 | 3 | 144 | 263 | 227 | 342 | 1.77e-15 | 77.8 |
MS.gene014272.t1 | AT2G20180 | 39.806 | 103 | 56 | 2 | 163 | 265 | 246 | 342 | 2.43e-15 | 78.2 |
MS.gene014272.t1 | AT2G20180 | 39.806 | 103 | 56 | 2 | 163 | 265 | 246 | 342 | 2.43e-15 | 78.2 |
MS.gene014272.t1 | AT2G20180 | 39.806 | 103 | 56 | 2 | 163 | 265 | 246 | 342 | 2.43e-15 | 78.2 |
MS.gene014272.t1 | AT2G20180 | 39.806 | 103 | 56 | 2 | 163 | 265 | 246 | 342 | 2.43e-15 | 78.2 |
MS.gene014272.t1 | AT1G09530 | 39.216 | 102 | 57 | 3 | 165 | 265 | 304 | 401 | 1.13e-14 | 76.3 |
MS.gene014272.t1 | AT1G09530 | 39.216 | 102 | 57 | 3 | 165 | 265 | 304 | 401 | 1.13e-14 | 76.3 |
MS.gene014272.t1 | AT1G09530 | 39.216 | 102 | 57 | 3 | 165 | 265 | 304 | 401 | 1.13e-14 | 76.3 |
MS.gene014272.t1 | AT1G09530 | 39.216 | 102 | 57 | 3 | 165 | 265 | 304 | 401 | 1.13e-14 | 76.3 |
MS.gene014272.t1 | AT1G09530 | 39.216 | 102 | 57 | 3 | 165 | 265 | 304 | 401 | 1.13e-14 | 76.3 |
MS.gene014272.t1 | AT1G09530 | 39.216 | 102 | 57 | 3 | 165 | 265 | 304 | 401 | 1.13e-14 | 76.3 |
MS.gene014272.t1 | AT1G51140 | 50.633 | 79 | 35 | 2 | 189 | 263 | 289 | 367 | 2.85e-14 | 74.3 |
MS.gene014272.t1 | AT4G09180 | 50.746 | 67 | 33 | 0 | 198 | 264 | 182 | 248 | 4.81e-14 | 72.0 |
MS.gene014272.t1 | AT1G03040 | 60.274 | 73 | 28 | 1 | 193 | 265 | 132 | 203 | 5.13e-14 | 72.8 |
MS.gene014272.t1 | AT1G03040 | 60.274 | 73 | 28 | 1 | 193 | 265 | 137 | 208 | 6.15e-14 | 72.4 |
MS.gene014272.t1 | AT4G28800 | 33.803 | 142 | 69 | 3 | 203 | 344 | 252 | 368 | 7.52e-14 | 73.2 |
MS.gene014272.t1 | AT1G35460 | 52.308 | 65 | 31 | 0 | 200 | 264 | 181 | 245 | 7.70e-14 | 71.6 |
MS.gene014272.t1 | AT2G20180 | 41.758 | 91 | 47 | 2 | 172 | 262 | 255 | 339 | 8.13e-14 | 72.4 |
MS.gene014272.t1 | AT4G02590 | 63.636 | 66 | 23 | 1 | 200 | 265 | 83 | 147 | 8.68e-14 | 71.2 |
MS.gene014272.t1 | AT4G28815 | 56.897 | 58 | 24 | 1 | 203 | 260 | 71 | 127 | 1.14e-13 | 70.5 |
MS.gene014272.t1 | AT1G03040 | 60.274 | 73 | 28 | 1 | 193 | 265 | 137 | 208 | 1.15e-13 | 72.0 |
MS.gene014272.t1 | AT4G02590 | 63.636 | 66 | 23 | 1 | 200 | 265 | 146 | 210 | 1.30e-13 | 71.6 |
MS.gene014272.t1 | AT4G02590 | 63.636 | 66 | 23 | 1 | 200 | 265 | 146 | 210 | 1.30e-13 | 71.6 |
MS.gene014272.t1 | AT4G28815 | 56.897 | 58 | 24 | 1 | 203 | 260 | 147 | 203 | 4.14e-13 | 70.1 |
MS.gene014272.t1 | AT1G27740 | 36.134 | 119 | 71 | 2 | 146 | 264 | 117 | 230 | 6.77e-13 | 68.9 |
MS.gene014272.t1 | AT4G28790 | 29.670 | 182 | 90 | 4 | 86 | 267 | 194 | 337 | 7.00e-13 | 69.7 |
MS.gene014272.t1 | AT4G28800 | 52.459 | 61 | 28 | 1 | 203 | 263 | 264 | 323 | 4.79e-12 | 67.8 |
MS.gene014272.t1 | AT2G46970 | 40.000 | 100 | 53 | 3 | 178 | 272 | 197 | 294 | 5.02e-12 | 67.8 |
MS.gene014272.t1 | AT2G46970 | 40.000 | 100 | 53 | 3 | 178 | 272 | 166 | 263 | 5.21e-12 | 67.4 |
MS.gene014272.t1 | AT2G46970 | 40.000 | 100 | 53 | 3 | 178 | 272 | 175 | 272 | 5.21e-12 | 67.4 |
MS.gene014272.t1 | AT4G33880 | 41.935 | 93 | 51 | 2 | 174 | 264 | 238 | 329 | 5.61e-12 | 67.0 |
MS.gene014272.t1 | AT4G00050 | 50.769 | 65 | 31 | 1 | 200 | 264 | 105 | 168 | 1.87e-11 | 65.1 |
MS.gene014272.t1 | AT2G43140 | 50.000 | 64 | 32 | 0 | 200 | 263 | 134 | 197 | 2.69e-11 | 63.2 |
MS.gene014272.t1 | AT4G00050 | 50.769 | 65 | 31 | 1 | 200 | 264 | 207 | 270 | 3.67e-11 | 64.7 |
MS.gene014272.t1 | AT2G43140 | 50.000 | 64 | 32 | 0 | 200 | 263 | 231 | 294 | 3.84e-11 | 64.3 |
MS.gene014272.t1 | AT4G00050 | 50.769 | 65 | 31 | 1 | 200 | 264 | 207 | 270 | 3.98e-11 | 64.7 |
MS.gene014272.t1 | AT4G36930 | 50.820 | 61 | 29 | 1 | 206 | 266 | 197 | 256 | 4.85e-11 | 64.3 |
Find 70 sgRNAs with CRISPR-Local
Find 159 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCACCTTCCCATGTTGTATT+AGG | 0.244216 | 3.3:-94973464 | None:intergenic |
CCACAGCAATTTGTTCCTTA+TGG | 0.249421 | 3.3:+94973225 | MS.gene014272:CDS |
AATTGAAGTTGTATAGGTTT+TGG | 0.253509 | 3.3:-94973490 | None:intergenic |
TCTCAATCTCAGTTATTTAC+AGG | 0.262036 | 3.3:+94973542 | MS.gene014272:CDS |
CTCATTCACTCTTCAATTGC+TGG | 0.307759 | 3.3:+94972145 | MS.gene014272:CDS |
TGGAATGAACCCTACTGATA+TGG | 0.311726 | 3.3:+94973260 | MS.gene014272:CDS |
AATTGAAGAGTGAATGAGTT+TGG | 0.318103 | 3.3:-94972140 | None:intergenic |
AAAGTTTGAGGAATGGATAT+AGG | 0.336253 | 3.3:-94973306 | None:intergenic |
GATCAAAATTGAAGTTGTAT+AGG | 0.339897 | 3.3:-94973496 | None:intergenic |
ATTGGGATTCCCGGTGATCT+TGG | 0.342453 | 3.3:-94972412 | None:intergenic |
AAGTTTGAGGAATGGATATA+GGG | 0.345771 | 3.3:-94973305 | None:intergenic |
ATTGAAGAGTGAATGAGTTT+GGG | 0.357408 | 3.3:-94972139 | None:intergenic |
TTGAATACTACGACTAGTTC+CGG | 0.373329 | 3.3:+94971842 | MS.gene014272:CDS |
CCAGGATGCAACAAAATTAC+AGG | 0.386637 | 3.3:+94972735 | MS.gene014272:CDS |
AAAGACAAGAGGATCAAAAT+AGG | 0.388939 | 3.3:+94972372 | MS.gene014272:CDS |
TATGTATGATGCAGGTTAGA+AGG | 0.402202 | 3.3:+94972670 | MS.gene014272:intron |
TTGCTTGTTGTTTAGGCTGT+TGG | 0.409201 | 3.3:+94972336 | MS.gene014272:intron |
AGCTATGGCTGTCGGTGGCT+TGG | 0.431984 | 3.3:-94972560 | None:intergenic |
AAATGCAAACTTTCAAGCTA+TGG | 0.441658 | 3.3:+94973152 | MS.gene014272:CDS |
ACTCTCAGTTGCTAAATTCC+CGG | 0.447140 | 3.3:-94971861 | None:intergenic |
CACGCACACACCTTGAGCTT+AGG | 0.457558 | 3.3:-94972223 | None:intergenic |
TGCTCGAACATGAATGTAAT+CGG | 0.461397 | 3.3:-94972529 | None:intergenic |
GAAGAATCAATAAAAGTTTG+AGG | 0.465715 | 3.3:-94973318 | None:intergenic |
AGAGTTGGCATTTGAAGAGT+TGG | 0.474811 | 3.3:-94972058 | None:intergenic |
TGAATACTACGACTAGTTCC+GGG | 0.477955 | 3.3:+94971843 | MS.gene014272:CDS |
ATCAATAAAAGTTTGAGGAA+TGG | 0.483827 | 3.3:-94973313 | None:intergenic |
CTTCTAAGTCCCATATCAGT+AGG | 0.485186 | 3.3:-94973270 | None:intergenic |
AACAAAATTACAGGAAAAGC+TGG | 0.485342 | 3.3:+94972744 | MS.gene014272:CDS |
GAGTGAATGAGTTTGGGGTC+TGG | 0.491043 | 3.3:-94972133 | None:intergenic |
ATGTATGATGCAGGTTAGAA+GGG | 0.501649 | 3.3:+94972671 | MS.gene014272:intron |
GGAATGAACCCTACTGATAT+GGG | 0.502117 | 3.3:+94973261 | MS.gene014272:CDS |
TTTGCATTTGCATCACAAGT+AGG | 0.509857 | 3.3:-94973138 | None:intergenic |
TCATTCACTCTTCAATTGCT+GGG | 0.512372 | 3.3:+94972146 | MS.gene014272:CDS |
TCAATATTGAAATCAAGCCT+TGG | 0.519925 | 3.3:-94972964 | None:intergenic |
CCAGCATCTAATCCACCATA+AGG | 0.520595 | 3.3:-94973240 | None:intergenic |
AATGCAAACTTTCAAGCTAT+GGG | 0.521255 | 3.3:+94973153 | MS.gene014272:CDS |
GAAGTAGTAACATCAAGAGT+TGG | 0.521259 | 3.3:-94972073 | None:intergenic |
AACAGTGTTTGAAAGACAAA+GGG | 0.521570 | 3.3:+94971898 | MS.gene014272:CDS |
CAGCAATTTGTTCCTTATGG+TGG | 0.522613 | 3.3:+94973228 | MS.gene014272:CDS |
TTACTCTTTCAGCTAAGCTA+TGG | 0.530789 | 3.3:-94972575 | None:intergenic |
AGAAGATACTTCAAACTCAA+AGG | 0.553682 | 3.3:+94972476 | MS.gene014272:CDS |
TTCAGCTAAGCTATGGCTGT+CGG | 0.556309 | 3.3:-94972568 | None:intergenic |
TAACAGTGTTTGAAAGACAA+AGG | 0.558772 | 3.3:+94971897 | MS.gene014272:CDS |
CCTTATGGTGGATTAGATGC+TGG | 0.561668 | 3.3:+94973240 | MS.gene014272:CDS |
CTACTGATATGGGACTTAGA+AGG | 0.561670 | 3.3:+94973271 | MS.gene014272:CDS |
TATCTGCAAGATTTAGTACC+AGG | 0.562856 | 3.3:+94972717 | MS.gene014272:CDS |
GACGGCGAATCCAAGATCAC+CGG | 0.574848 | 3.3:+94972402 | MS.gene014272:CDS |
AGTTTGGGGTCTGGAAGAAG+AGG | 0.575334 | 3.3:-94972124 | None:intergenic |
TTCTAAGTCCCATATCAGTA+GGG | 0.581586 | 3.3:-94973269 | None:intergenic |
TCATCATAATCCTAAGCTCA+AGG | 0.584084 | 3.3:+94972213 | MS.gene014272:CDS |
GTAAATAACTGAGATTGAGA+AGG | 0.584711 | 3.3:-94973539 | None:intergenic |
TAAATCAGCAGCAAGTGAAG+AGG | 0.586756 | 3.3:-94972032 | None:intergenic |
TTCAAACACTGTTATGTCAG+AGG | 0.587410 | 3.3:-94971888 | None:intergenic |
GGTGAATTGAACTGAAGATA+AGG | 0.590017 | 3.3:-94973204 | None:intergenic |
TTGGGGTCTGGAAGAAGAGG+TGG | 0.593623 | 3.3:-94972121 | None:intergenic |
CTACCTAATACAACATGGGA+AGG | 0.593979 | 3.3:+94973461 | MS.gene014272:CDS |
AGCTAAGCTATGGCTGTCGG+TGG | 0.605688 | 3.3:-94972565 | None:intergenic |
AATTAGCTACTGTTAATCCA+AGG | 0.613412 | 3.3:+94972947 | MS.gene014272:CDS |
AAATTCTACCTAATACAACA+TGG | 0.624191 | 3.3:+94973456 | MS.gene014272:CDS |
ACGGCGAATCCAAGATCACC+GGG | 0.628691 | 3.3:+94972403 | MS.gene014272:CDS |
ATCAAAATAGGTGCTGAGGA+CGG | 0.629527 | 3.3:+94972384 | MS.gene014272:CDS |
TTGAAGAGTGAATGAGTTTG+GGG | 0.630480 | 3.3:-94972138 | None:intergenic |
GACAAAGGGAAAGAATGAAG+TGG | 0.633675 | 3.3:+94971912 | MS.gene014272:CDS |
GAGGATCAAAATAGGTGCTG+AGG | 0.635802 | 3.3:+94972380 | MS.gene014272:CDS |
AGTTTGAGGAATGGATATAG+GGG | 0.638076 | 3.3:-94973304 | None:intergenic |
AAGTTGAGAACAAAGACAAG+AGG | 0.638388 | 3.3:+94972361 | MS.gene014272:CDS |
ATTCATGTTCGAGCACGTCG+TGG | 0.642577 | 3.3:+94972537 | MS.gene014272:CDS |
TTGAGCTTAGGATTATGATG+AGG | 0.647091 | 3.3:-94972211 | None:intergenic |
AATTCTACCTAATACAACAT+GGG | 0.654432 | 3.3:+94973457 | MS.gene014272:CDS |
CCATAAGGAACAAATTGCTG+TGG | 0.664587 | 3.3:-94973225 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATAAATAAAGTGAATTAAT+TGG | + | chr3.3:94972280-94972299 | MS.gene014272:intron | 10.0% |
!! | TTCACAAAATATAATTAATT+TGG | - | chr3.3:94974288-94974307 | None:intergenic | 10.0% |
!!! | CTAAAGATTTTTTTTTTAAA+TGG | + | chr3.3:94973734-94973753 | MS.gene014272:intron | 10.0% |
!!! | TTATATTTTGTGAAATAAAT+TGG | + | chr3.3:94974294-94974313 | MS.gene014272:intron | 10.0% |
!! | TAAGTAGTAATAATATACTT+TGG | + | chr3.3:94972595-94972614 | MS.gene014272:intron | 15.0% |
!! | TGAGAAAATAAAAAAGATTT+GGG | + | chr3.3:94974086-94974105 | MS.gene014272:intron | 15.0% |
!! | TTGAGAAAATAAAAAAGATT+TGG | + | chr3.3:94974085-94974104 | MS.gene014272:intron | 15.0% |
!!! | TAACATAAACAAATTTGTTA+TGG | - | chr3.3:94972901-94972920 | None:intergenic | 15.0% |
!! | AAAATTAAAACACTAGTAAC+GGG | - | chr3.3:94973385-94973404 | None:intergenic | 20.0% |
!! | AATATTTCCATATTTAGTGT+TGG | - | chr3.3:94974676-94974695 | None:intergenic | 20.0% |
!! | AGAAAATTACAATTGCAAAA+AGG | - | chr3.3:94974342-94974361 | None:intergenic | 20.0% |
!! | ATTAAGCTAAAATACAGATT+AGG | - | chr3.3:94973048-94973067 | None:intergenic | 20.0% |
!! | CAAAATTAAAACACTAGTAA+CGG | - | chr3.3:94973386-94973405 | None:intergenic | 20.0% |
!! | GAAAATTACAATTGCAAAAA+GGG | - | chr3.3:94974341-94974360 | None:intergenic | 20.0% |
!! | GTTCATTATTGAAAAACAAA+AGG | - | chr3.3:94973715-94973734 | None:intergenic | 20.0% |
!! | TAATTATATATGTATGATGC+AGG | + | chr3.3:94972662-94972681 | MS.gene014272:intron | 20.0% |
!!! | AAAAAAATGCATAAGTTGAA+TGG | + | chr3.3:94974237-94974256 | MS.gene014272:intron | 20.0% |
!!! | ATAAACAAATTTGTTATGGA+TGG | - | chr3.3:94972897-94972916 | None:intergenic | 20.0% |
!!! | CAATGACATTTTAGAATTAA+AGG | - | chr3.3:94974164-94974183 | None:intergenic | 20.0% |
!!! | CAATTTTCAACAACTTTTTA+GGG | + | chr3.3:94973870-94973889 | MS.gene014272:intron | 20.0% |
!!! | GTGTTTTAATTTTGTTGTAT+TGG | + | chr3.3:94973392-94973411 | MS.gene014272:intron | 20.0% |
!!! | TTTTGTGAAATAAATTGGAT+AGG | + | chr3.3:94974299-94974318 | MS.gene014272:intron | 20.0% |
! | AAAAATATTAACAGAGAGAG+TGG | - | chr3.3:94973360-94973379 | None:intergenic | 25.0% |
! | AAATTCTACCTAATACAACA+TGG | + | chr3.3:94973456-94973475 | MS.gene014272:CDS | 25.0% |
! | AATTCTACCTAATACAACAT+GGG | + | chr3.3:94973457-94973476 | MS.gene014272:CDS | 25.0% |
! | AGTGATATGATTTGAAAGAT+AGG | + | chr3.3:94974599-94974618 | MS.gene014272:intron | 25.0% |
! | ATAGAAAAGAAAGAGAGAAA+GGG | + | chr3.3:94974553-94974572 | MS.gene014272:intron | 25.0% |
! | ATCAATAAAAGTTTGAGGAA+TGG | - | chr3.3:94973316-94973335 | None:intergenic | 25.0% |
! | ATTACATAGCATTAAAGTAG+TGG | - | chr3.3:94973821-94973840 | None:intergenic | 25.0% |
! | CCTAAAAAGTTGTTGAAAAT+TGG | - | chr3.3:94973872-94973891 | None:intergenic | 25.0% |
! | GAAGAATCAATAAAAGTTTG+AGG | - | chr3.3:94973321-94973340 | None:intergenic | 25.0% |
! | GATCAAAATTGAAGTTGTAT+AGG | - | chr3.3:94973499-94973518 | None:intergenic | 25.0% |
! | TCACAAAAGTTGTTGAAAAT+TGG | + | chr3.3:94973989-94974008 | MS.gene014272:intron | 25.0% |
! | TGATGATCTATTTGAAAAAG+AGG | + | chr3.3:94972984-94973003 | MS.gene014272:CDS | 25.0% |
! | TGTAAGTGTTTGTATTGTAT+CGG | + | chr3.3:94974113-94974132 | MS.gene014272:intron | 25.0% |
! | TTACATAGCATTAAAGTAGT+GGG | - | chr3.3:94973820-94973839 | None:intergenic | 25.0% |
! | TTATGCTTGATCAAAATGAA+GGG | - | chr3.3:94973681-94973700 | None:intergenic | 25.0% |
! | TTCTCAAATTATTACAGTGT+CGG | - | chr3.3:94974072-94974091 | None:intergenic | 25.0% |
! | TTTATGCTTGATCAAAATGA+AGG | - | chr3.3:94973682-94973701 | None:intergenic | 25.0% |
!! | AATTGAAGTTGTATAGGTTT+TGG | - | chr3.3:94973493-94973512 | None:intergenic | 25.0% |
!! | ATTGTAATTTTCTTGCAACT+TGG | + | chr3.3:94974349-94974368 | MS.gene014272:intron | 25.0% |
!! | CCAATTTTCAACAACTTTTT+AGG | + | chr3.3:94973869-94973888 | MS.gene014272:intron | 25.0% |
!! | TATTGAAAAACAAAAGGTAC+TGG | - | chr3.3:94973709-94973728 | None:intergenic | 25.0% |
!! | TCATTTTCTCTGATTTTAAG+TGG | - | chr3.3:94974487-94974506 | None:intergenic | 25.0% |
!! | TTTAAAGGTTTATAGCTTTG+AGG | + | chr3.3:94974373-94974392 | MS.gene014272:intron | 25.0% |
!!! | ATAAAGTGGATTACAACTTA+GGG | + | chr3.3:94974421-94974440 | MS.gene014272:intron | 25.0% |
!!! | ATCTTTAAAGTAGAAAGTAG+AGG | + | chr3.3:94973614-94973633 | MS.gene014272:intron | 25.0% |
!!! | ATTTTAAGTGGTCTCTAAAA+TGG | - | chr3.3:94974475-94974494 | None:intergenic | 25.0% |
!!! | TAATTTGTTGCTTGTTGTTT+AGG | + | chr3.3:94972329-94972348 | MS.gene014272:intron | 25.0% |
!!! | TTGTTGTTCTTTTTGGTATT+GGG | - | chr3.3:94972432-94972451 | None:intergenic | 25.0% |
!!! | TTTTAAGTGGTCTCTAAAAT+GGG | - | chr3.3:94974474-94974493 | None:intergenic | 25.0% |
AAAGACAAGAGGATCAAAAT+AGG | + | chr3.3:94972372-94972391 | MS.gene014272:CDS | 30.0% | |
AAAGTTTGAGGAATGGATAT+AGG | - | chr3.3:94973309-94973328 | None:intergenic | 30.0% | |
AAATGCAAACTTTCAAGCTA+TGG | + | chr3.3:94973152-94973171 | MS.gene014272:CDS | 30.0% | |
AACAAAATTACAGGAAAAGC+TGG | + | chr3.3:94972744-94972763 | MS.gene014272:CDS | 30.0% | |
AACAGTGTTTGAAAGACAAA+GGG | + | chr3.3:94971898-94971917 | MS.gene014272:CDS | 30.0% | |
AAGTTTGAGGAATGGATATA+GGG | - | chr3.3:94973308-94973327 | None:intergenic | 30.0% | |
AATGCAAACTTTCAAGCTAT+GGG | + | chr3.3:94973153-94973172 | MS.gene014272:CDS | 30.0% | |
AATTAGCTACTGTTAATCCA+AGG | + | chr3.3:94972947-94972966 | MS.gene014272:CDS | 30.0% | |
AATTGAAGAGTGAATGAGTT+TGG | - | chr3.3:94972143-94972162 | None:intergenic | 30.0% | |
ACATATACTATGCTAGGAAT+AGG | + | chr3.3:94974576-94974595 | MS.gene014272:intron | 30.0% | |
ACTAATACTTTGTTCAGCTT+AGG | + | chr3.3:94974198-94974217 | MS.gene014272:intron | 30.0% | |
AGAAGATACTTCAAACTCAA+AGG | + | chr3.3:94972476-94972495 | MS.gene014272:CDS | 30.0% | |
ATTCAATTCAATTATGCAGC+TGG | + | chr3.3:94973769-94973788 | MS.gene014272:intron | 30.0% | |
ATTGAAGAGTGAATGAGTTT+GGG | - | chr3.3:94972142-94972161 | None:intergenic | 30.0% | |
CATAGATAGATCAATGTGAT+AGG | - | chr3.3:94972872-94972891 | None:intergenic | 30.0% | |
GAATGTTCCAACACTAAATA+TGG | + | chr3.3:94974666-94974685 | MS.gene014272:intron | 30.0% | |
GAGAAAATGATAGTTTCACA+AGG | + | chr3.3:94974497-94974516 | MS.gene014272:intron | 30.0% | |
GATAGAAAAGAAAGAGAGAA+AGG | + | chr3.3:94974552-94974571 | MS.gene014272:intron | 30.0% | |
GGTAATAAAGAATATGCAGA+TGG | + | chr3.3:94973005-94973024 | MS.gene014272:intron | 30.0% | |
GTAAATAACTGAGATTGAGA+AGG | - | chr3.3:94973542-94973561 | None:intergenic | 30.0% | |
TAAAATGGGAGATTGTGAAA+TGG | - | chr3.3:94974460-94974479 | None:intergenic | 30.0% | |
TAACAGTGTTTGAAAGACAA+AGG | + | chr3.3:94971897-94971916 | MS.gene014272:CDS | 30.0% | |
TATGCTTGATCAAAATGAAG+GGG | - | chr3.3:94973680-94973699 | None:intergenic | 30.0% | |
TCAATATTGAAATCAAGCCT+TGG | - | chr3.3:94972967-94972986 | None:intergenic | 30.0% | |
TCTCAATCTCAGTTATTTAC+AGG | + | chr3.3:94973542-94973561 | MS.gene014272:CDS | 30.0% | |
TGCTATGTAATAAGATAACG+AGG | + | chr3.3:94973830-94973849 | MS.gene014272:intron | 30.0% | |
TGTGAAATAAATTGGATAGG+AGG | + | chr3.3:94974302-94974321 | MS.gene014272:intron | 30.0% | |
TTCTTGCAACTTGGATTTAA+AGG | + | chr3.3:94974358-94974377 | MS.gene014272:intron | 30.0% | |
TTGTCATTGTCCAATAAGAA+TGG | - | chr3.3:94973910-94973929 | None:intergenic | 30.0% | |
! | CGTCAATCATTTTCATAAAG+TGG | + | chr3.3:94974407-94974426 | MS.gene014272:intron | 30.0% |
!! | CATAAAGTGGATTACAACTT+AGG | + | chr3.3:94974420-94974439 | MS.gene014272:intron | 30.0% |
!! | GTTGTTGTTCTTTTTGGTAT+TGG | - | chr3.3:94972433-94972452 | None:intergenic | 30.0% |
!! | TCTAAAAGTGTTGTTTGACA+TGG | + | chr3.3:94974724-94974743 | MS.gene014272:intron | 30.0% |
!! | TTTGTGTTGATTCCTTACAT+AGG | + | chr3.3:94973110-94973129 | MS.gene014272:intron | 30.0% |
AAAATGATTGACGCTATTGC+TGG | - | chr3.3:94974400-94974419 | None:intergenic | 35.0% | |
AAAGGGACATATACTATGCT+AGG | + | chr3.3:94974570-94974589 | MS.gene014272:intron | 35.0% | |
AAGTAGGAAACACCTATGTA+AGG | - | chr3.3:94973125-94973144 | None:intergenic | 35.0% | |
AAGTTGAGAACAAAGACAAG+AGG | + | chr3.3:94972361-94972380 | MS.gene014272:CDS | 35.0% | |
AGTTTGAGGAATGGATATAG+GGG | - | chr3.3:94973307-94973326 | None:intergenic | 35.0% | |
ATGTATGATGCAGGTTAGAA+GGG | + | chr3.3:94972671-94972690 | MS.gene014272:intron | 35.0% | |
ATGTCACATGGTTATCTTAG+AGG | - | chr3.3:94974031-94974050 | None:intergenic | 35.0% | |
CAACAACAACAACAACAACA+AGG | + | chr3.3:94971935-94971954 | MS.gene014272:CDS | 35.0% | |
CCAATAAGAATGGAGGAAAA+AGG | - | chr3.3:94973900-94973919 | None:intergenic | 35.0% | |
GAAGTAGTAACATCAAGAGT+TGG | - | chr3.3:94972076-94972095 | None:intergenic | 35.0% | |
GGTGAATTGAACTGAAGATA+AGG | - | chr3.3:94973207-94973226 | None:intergenic | 35.0% | |
GTCTCTTCAAAAACAAGTTG+AGG | + | chr3.3:94972797-94972816 | MS.gene014272:CDS | 35.0% | |
TATCTGCAAGATTTAGTACC+AGG | + | chr3.3:94972717-94972736 | MS.gene014272:CDS | 35.0% | |
TATGTATGATGCAGGTTAGA+AGG | + | chr3.3:94972670-94972689 | MS.gene014272:intron | 35.0% | |
TCATCATAATCCTAAGCTCA+AGG | + | chr3.3:94972213-94972232 | MS.gene014272:CDS | 35.0% | |
TCATTCACTCTTCAATTGCT+GGG | + | chr3.3:94972146-94972165 | MS.gene014272:CDS | 35.0% | |
TCATTGTCCAATAAGAATGG+AGG | - | chr3.3:94973907-94973926 | None:intergenic | 35.0% | |
TGCTCGAACATGAATGTAAT+CGG | - | chr3.3:94972532-94972551 | None:intergenic | 35.0% | |
TGTCATTGTATGATGTCACA+TGG | - | chr3.3:94974043-94974062 | None:intergenic | 35.0% | |
TTACTCTTTCAGCTAAGCTA+TGG | - | chr3.3:94972578-94972597 | None:intergenic | 35.0% | |
TTCAAACACTGTTATGTCAG+AGG | - | chr3.3:94971891-94971910 | None:intergenic | 35.0% | |
TTCTAAGTCCCATATCAGTA+GGG | - | chr3.3:94973272-94973291 | None:intergenic | 35.0% | |
TTGAAGAGTGAATGAGTTTG+GGG | - | chr3.3:94972141-94972160 | None:intergenic | 35.0% | |
TTGAGCTTAGGATTATGATG+AGG | - | chr3.3:94972214-94972233 | None:intergenic | 35.0% | |
TTTGCATTTGCATCACAAGT+AGG | - | chr3.3:94973141-94973160 | None:intergenic | 35.0% | |
! | CCTTTTTCCTCCATTCTTAT+TGG | + | chr3.3:94973897-94973916 | MS.gene014272:intron | 35.0% |
! | GATTCTTCTTGTTTCTCTGT+AGG | + | chr3.3:94973333-94973352 | MS.gene014272:intron | 35.0% |
! | GGATTATGATGAGGTTTTTC+AGG | - | chr3.3:94972205-94972224 | None:intergenic | 35.0% |
! | TGAGTGGGTTTAATAGATGA+TGG | + | chr3.3:94973643-94973662 | MS.gene014272:intron | 35.0% |
! | TGCTACACAGTTTTCTTTGT+TGG | - | chr3.3:94972457-94972476 | None:intergenic | 35.0% |
! | TTACAACTTAGGGTTGTTTC+TGG | + | chr3.3:94974431-94974450 | MS.gene014272:intron | 35.0% |
! | TTGAATACTACGACTAGTTC+CGG | + | chr3.3:94971842-94971861 | MS.gene014272:CDS | 35.0% |
!!! | GTTGGTGTTGTTGTTCTTTT+TGG | - | chr3.3:94972439-94972458 | None:intergenic | 35.0% |
AAAGTAGAGGCAAAAGTGAG+TGG | + | chr3.3:94973627-94973646 | MS.gene014272:intron | 40.0% | |
AAGTAGAGGCAAAAGTGAGT+GGG | + | chr3.3:94973628-94973647 | MS.gene014272:intron | 40.0% | |
ACTCTCAGTTGCTAAATTCC+CGG | - | chr3.3:94971864-94971883 | None:intergenic | 40.0% | |
AGAGTTGGCATTTGAAGAGT+TGG | - | chr3.3:94972061-94972080 | None:intergenic | 40.0% | |
CCAGGATGCAACAAAATTAC+AGG | + | chr3.3:94972735-94972754 | MS.gene014272:CDS | 40.0% | |
CCATAAGGAACAAATTGCTG+TGG | - | chr3.3:94973228-94973247 | None:intergenic | 40.0% | |
CTACCTAATACAACATGGGA+AGG | + | chr3.3:94973461-94973480 | MS.gene014272:CDS | 40.0% | |
CTACTGATATGGGACTTAGA+AGG | + | chr3.3:94973271-94973290 | MS.gene014272:CDS | 40.0% | |
CTCATTCACTCTTCAATTGC+TGG | + | chr3.3:94972145-94972164 | MS.gene014272:CDS | 40.0% | |
CTTCTAAGTCCCATATCAGT+AGG | - | chr3.3:94973273-94973292 | None:intergenic | 40.0% | |
GACAAAGGGAAAGAATGAAG+TGG | + | chr3.3:94971912-94971931 | MS.gene014272:CDS | 40.0% | |
GGAATGAACCCTACTGATAT+GGG | + | chr3.3:94973261-94973280 | MS.gene014272:CDS | 40.0% | |
TAAATCAGCAGCAAGTGAAG+AGG | - | chr3.3:94972035-94972054 | None:intergenic | 40.0% | |
TCACCTTCCCATGTTGTATT+AGG | - | chr3.3:94973467-94973486 | None:intergenic | 40.0% | |
TGGAATGAACCCTACTGATA+TGG | + | chr3.3:94973260-94973279 | MS.gene014272:CDS | 40.0% | |
TTCACAAGGCTTACGCTTAT+GGG | + | chr3.3:94974511-94974530 | MS.gene014272:intron | 40.0% | |
TTTCACAAGGCTTACGCTTA+TGG | + | chr3.3:94974510-94974529 | MS.gene014272:intron | 40.0% | |
! | CAGCAATTTGTTCCTTATGG+TGG | + | chr3.3:94973228-94973247 | MS.gene014272:CDS | 40.0% |
! | CCACAGCAATTTGTTCCTTA+TGG | + | chr3.3:94973225-94973244 | MS.gene014272:CDS | 40.0% |
! | CCTGTAATTTTGTTGCATCC+TGG | - | chr3.3:94972738-94972757 | None:intergenic | 40.0% |
! | GCATTAAAGTAGTGGGAAAG+TGG | - | chr3.3:94973813-94973832 | None:intergenic | 40.0% |
! | TGAATACTACGACTAGTTCC+GGG | + | chr3.3:94971843-94971862 | MS.gene014272:CDS | 40.0% |
!! | ATCAAAATAGGTGCTGAGGA+CGG | + | chr3.3:94972384-94972403 | MS.gene014272:CDS | 40.0% |
!! | CTTTTTGGTATTGGGATTCC+CGG | - | chr3.3:94972424-94972443 | None:intergenic | 40.0% |
!! | TTGCTTGTTGTTTAGGCTGT+TGG | + | chr3.3:94972336-94972355 | MS.gene014272:intron | 40.0% |
CCAGCATCTAATCCACCATA+AGG | - | chr3.3:94973243-94973262 | None:intergenic | 45.0% | |
TTCAGCTAAGCTATGGCTGT+CGG | - | chr3.3:94972571-94972590 | None:intergenic | 45.0% | |
! | GAGGATCAAAATAGGTGCTG+AGG | + | chr3.3:94972380-94972399 | MS.gene014272:CDS | 45.0% |
!! | CCTTATGGTGGATTAGATGC+TGG | + | chr3.3:94973240-94973259 | MS.gene014272:CDS | 45.0% |
!! | GTGTTGTTTGACATGGATGC+AGG | + | chr3.3:94974731-94974750 | MS.gene014272:intron | 45.0% |
ATTCATGTTCGAGCACGTCG+TGG | + | chr3.3:94972537-94972556 | MS.gene014272:CDS | 50.0% | |
ATTGGGATTCCCGGTGATCT+TGG | - | chr3.3:94972415-94972434 | None:intergenic | 50.0% | |
GCGTGTTCGACGACACATAT+CGG | - | chr3.3:94974142-94974161 | None:intergenic | 50.0% | |
! | AGTTTGGGGTCTGGAAGAAG+AGG | - | chr3.3:94972127-94972146 | None:intergenic | 50.0% |
! | GAGTGAATGAGTTTGGGGTC+TGG | - | chr3.3:94972136-94972155 | None:intergenic | 50.0% |
ACGGCGAATCCAAGATCACC+GGG | + | chr3.3:94972403-94972422 | MS.gene014272:CDS | 55.0% | |
AGCTAAGCTATGGCTGTCGG+TGG | - | chr3.3:94972568-94972587 | None:intergenic | 55.0% | |
CACGCACACACCTTGAGCTT+AGG | - | chr3.3:94972226-94972245 | None:intergenic | 55.0% | |
GACGGCGAATCCAAGATCAC+CGG | + | chr3.3:94972402-94972421 | MS.gene014272:CDS | 55.0% | |
TTGGGGTCTGGAAGAAGAGG+TGG | - | chr3.3:94972124-94972143 | None:intergenic | 55.0% | |
AGCTATGGCTGTCGGTGGCT+TGG | - | chr3.3:94972563-94972582 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.3 | gene | 94971830 | 94974790 | 94971830 | ID=MS.gene014272 |
chr3.3 | mRNA | 94971830 | 94974790 | 94971830 | ID=MS.gene014272.t1;Parent=MS.gene014272 |
chr3.3 | exon | 94971830 | 94972234 | 94971830 | ID=MS.gene014272.t1.exon1;Parent=MS.gene014272.t1 |
chr3.3 | CDS | 94971830 | 94972234 | 94971830 | ID=cds.MS.gene014272.t1;Parent=MS.gene014272.t1 |
chr3.3 | exon | 94972351 | 94972593 | 94972351 | ID=MS.gene014272.t1.exon2;Parent=MS.gene014272.t1 |
chr3.3 | CDS | 94972351 | 94972593 | 94972351 | ID=cds.MS.gene014272.t1;Parent=MS.gene014272.t1 |
chr3.3 | exon | 94972684 | 94972818 | 94972684 | ID=MS.gene014272.t1.exon3;Parent=MS.gene014272.t1 |
chr3.3 | CDS | 94972684 | 94972818 | 94972684 | ID=cds.MS.gene014272.t1;Parent=MS.gene014272.t1 |
chr3.3 | exon | 94972934 | 94973005 | 94972934 | ID=MS.gene014272.t1.exon4;Parent=MS.gene014272.t1 |
chr3.3 | CDS | 94972934 | 94973005 | 94972934 | ID=cds.MS.gene014272.t1;Parent=MS.gene014272.t1 |
chr3.3 | exon | 94973132 | 94973350 | 94973132 | ID=MS.gene014272.t1.exon5;Parent=MS.gene014272.t1 |
chr3.3 | CDS | 94973132 | 94973350 | 94973132 | ID=cds.MS.gene014272.t1;Parent=MS.gene014272.t1 |
chr3.3 | exon | 94973452 | 94973563 | 94973452 | ID=MS.gene014272.t1.exon6;Parent=MS.gene014272.t1 |
chr3.3 | CDS | 94973452 | 94973563 | 94973452 | ID=cds.MS.gene014272.t1;Parent=MS.gene014272.t1 |
chr3.3 | exon | 94974753 | 94974790 | 94974753 | ID=MS.gene014272.t1.exon7;Parent=MS.gene014272.t1 |
chr3.3 | CDS | 94974753 | 94974790 | 94974753 | ID=cds.MS.gene014272.t1;Parent=MS.gene014272.t1 |
Gene Sequence |
Protein sequence |