Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014526.t1 | XP_013462112.1 | 94 | 284 | 16 | 1 | 1 | 284 | 1 | 283 | 2.00E-119 | 438.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014526.t1 | Q9ZU65 | 63.9 | 61 | 22 | 0 | 204 | 264 | 231 | 291 | 4.4e-14 | 80.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014526.t1 | A0A072V2Q5 | 94.0 | 284 | 16 | 1 | 1 | 284 | 1 | 283 | 1.5e-119 | 438.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene014526.t1 | TF | OFP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014526.t1 | MTR_3g111780 | 94.718 | 284 | 14 | 1 | 1 | 284 | 1 | 283 | 0.0 | 501 |
| MS.gene014526.t1 | MTR_8g103520 | 50.000 | 72 | 36 | 0 | 193 | 264 | 218 | 289 | 5.16e-20 | 87.8 |
| MS.gene014526.t1 | MTR_0907s0020 | 52.941 | 68 | 32 | 0 | 197 | 264 | 100 | 167 | 8.28e-20 | 85.1 |
| MS.gene014526.t1 | MTR_5g075210 | 58.462 | 65 | 27 | 0 | 199 | 263 | 280 | 344 | 6.43e-19 | 85.9 |
| MS.gene014526.t1 | MTR_7g105790 | 53.623 | 69 | 32 | 0 | 202 | 270 | 113 | 181 | 5.47e-18 | 80.5 |
| MS.gene014526.t1 | MTR_7g072875 | 32.468 | 154 | 80 | 2 | 129 | 260 | 129 | 280 | 5.60e-18 | 82.4 |
| MS.gene014526.t1 | MTR_4g052040 | 53.846 | 65 | 30 | 0 | 200 | 264 | 100 | 164 | 1.82e-17 | 78.6 |
| MS.gene014526.t1 | MTR_5g079710 | 50.725 | 69 | 34 | 0 | 196 | 264 | 88 | 156 | 9.95e-17 | 78.2 |
| MS.gene014526.t1 | MTR_7g072630 | 26.829 | 287 | 155 | 8 | 27 | 260 | 58 | 342 | 1.09e-16 | 79.3 |
| MS.gene014526.t1 | MTR_8g087530 | 47.692 | 65 | 34 | 0 | 199 | 263 | 258 | 322 | 6.48e-16 | 77.0 |
| MS.gene014526.t1 | MTR_2g018030 | 46.774 | 62 | 33 | 0 | 199 | 260 | 277 | 338 | 9.80e-16 | 76.6 |
| MS.gene014526.t1 | MTR_4g028930 | 50.820 | 61 | 30 | 0 | 200 | 260 | 315 | 375 | 6.36e-15 | 74.3 |
| MS.gene014526.t1 | MTR_4g052060 | 51.667 | 60 | 29 | 0 | 205 | 264 | 99 | 158 | 1.91e-13 | 67.8 |
| MS.gene014526.t1 | MTR_1g111640 | 45.161 | 62 | 34 | 0 | 198 | 259 | 136 | 197 | 3.67e-11 | 62.4 |
| MS.gene014526.t1 | MTR_4g132740 | 37.500 | 88 | 44 | 1 | 178 | 265 | 71 | 147 | 5.82e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014526.t1 | AT5G19650 | 62.121 | 66 | 25 | 0 | 199 | 264 | 154 | 219 | 7.03e-23 | 94.4 |
| MS.gene014526.t1 | AT2G18500 | 61.538 | 65 | 25 | 0 | 199 | 263 | 226 | 290 | 2.81e-20 | 89.0 |
| MS.gene014526.t1 | AT3G52525 | 55.385 | 65 | 29 | 0 | 197 | 261 | 64 | 128 | 2.10e-18 | 80.5 |
| MS.gene014526.t1 | AT2G30400 | 52.308 | 65 | 31 | 0 | 199 | 263 | 252 | 316 | 3.14e-18 | 83.6 |
| MS.gene014526.t1 | AT5G58360 | 53.846 | 65 | 30 | 0 | 199 | 263 | 224 | 288 | 3.68e-17 | 80.1 |
| MS.gene014526.t1 | AT2G36026 | 55.000 | 60 | 27 | 0 | 205 | 264 | 92 | 151 | 4.75e-17 | 77.8 |
| MS.gene014526.t1 | AT1G06920 | 33.010 | 103 | 64 | 1 | 167 | 264 | 206 | 308 | 3.53e-16 | 77.8 |
| MS.gene014526.t1 | AT5G01840 | 48.529 | 68 | 35 | 0 | 203 | 270 | 202 | 269 | 3.71e-15 | 73.9 |
| MS.gene014526.t1 | AT5G22240 | 44.118 | 68 | 38 | 0 | 196 | 263 | 93 | 160 | 4.25e-13 | 67.0 |
| MS.gene014526.t1 | AT4G18830 | 45.902 | 61 | 33 | 0 | 199 | 259 | 282 | 342 | 7.42e-12 | 65.5 |
Find 67 sgRNAs with CRISPR-Local
Find 71 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGGCAGGGCCTGGATTCC+CGG | 0.272464 | 3.1:+89251814 | None:intergenic |
| CTCAAATTATAGTGATAAAA+AGG | 0.274257 | 3.1:-89251510 | MS.gene014526:CDS |
| GGTCCATTCTTCTAGTACTA+TGG | 0.311039 | 3.1:-89251555 | MS.gene014526:CDS |
| TGCGAGCTTTCATGGAGATT+TGG | 0.332540 | 3.1:-89251133 | MS.gene014526:CDS |
| AGTAATTGTGCGAGCTTTCA+TGG | 0.344864 | 3.1:-89251141 | MS.gene014526:CDS |
| GACACGTTGCATTGGTGTTC+CGG | 0.349518 | 3.1:+89251725 | None:intergenic |
| CACCGGAGAAAGACGGTATA+TGG | 0.359937 | 3.1:+89251796 | None:intergenic |
| TCCTCTTTCCCCGGGAATCC+AGG | 0.367021 | 3.1:-89251824 | MS.gene014526:CDS |
| TTTGGCAACAAATGTTCGTT+TGG | 0.381425 | 3.1:-89251115 | MS.gene014526:CDS |
| GGCGACGAAGCAGGAAGGTT+TGG | 0.382600 | 3.1:+89251746 | None:intergenic |
| TTATCACTATAATTTGAGAT+AGG | 0.385663 | 3.1:+89251515 | None:intergenic |
| ATACCCTATGTCATATGCTT+TGG | 0.387292 | 3.1:+89251769 | None:intergenic |
| GGCAAAAGAAAGCTTTGCTT+TGG | 0.397965 | 3.1:-89251303 | MS.gene014526:CDS |
| AGTGAGGTTTCAAAGTATTA+CGG | 0.405418 | 3.1:-89251426 | MS.gene014526:CDS |
| ATTTAACTAGCTCGAATAGA+AGG | 0.424510 | 3.1:-89251478 | MS.gene014526:CDS |
| AATGACCTTTCCTCTTTCCC+CGG | 0.427656 | 3.1:-89251833 | MS.gene014526:CDS |
| ACTTGACATAACCTTCGTTT+CGG | 0.428668 | 3.1:+89251340 | None:intergenic |
| GATGTCCGAGGCCAAGGACT+TGG | 0.437700 | 3.1:-89251213 | MS.gene014526:CDS |
| ATGGCAGGGCCTGGATTCCC+GGG | 0.439698 | 3.1:+89251815 | None:intergenic |
| GTTAGAGATGATAGAAGAGA+TGG | 0.441612 | 3.1:-89251237 | MS.gene014526:CDS |
| TTCTTGCTTAGCAAGATTCT+CGG | 0.449560 | 3.1:-89251588 | MS.gene014526:CDS |
| GAAGGTTATGTCAAGTAGAA+TGG | 0.463702 | 3.1:-89251333 | MS.gene014526:CDS |
| GAAGGTTATGTCAAGTAGAA+TGG | 0.463702 | 3.1:-89251381 | MS.gene014526:CDS |
| CTATGGATAGTACTAAAGTT+AGG | 0.470027 | 3.1:-89251538 | MS.gene014526:CDS |
| TGAAGAAGGTTGAGAGAGTG+AGG | 0.472397 | 3.1:-89251442 | MS.gene014526:CDS |
| CAATAGTTGCTCCAAGTCCT+TGG | 0.478606 | 3.1:+89251202 | None:intergenic |
| TCAAACAAATGTTCAAACTA+AGG | 0.481359 | 3.1:-89251069 | MS.gene014526:CDS |
| GGGGAAAGAGGAAAGGTCAT+TGG | 0.484366 | 3.1:+89251835 | None:intergenic |
| AGACGGTATATGGCAGGGCC+TGG | 0.484707 | 3.1:+89251806 | None:intergenic |
| ACTAGAAGAATGGACCTTCT+CGG | 0.488884 | 3.1:+89251562 | None:intergenic |
| GCCTGGATTCCCGGGGAAAG+AGG | 0.494617 | 3.1:+89251823 | None:intergenic |
| TATCCATAGTACTAGAAGAA+TGG | 0.495158 | 3.1:+89251552 | None:intergenic |
| AGAAACTCACTTCTTCTTGA+GGG | 0.501729 | 3.1:+89251650 | None:intergenic |
| TGGTGTTCCGGCGACGAAGC+AGG | 0.502249 | 3.1:+89251737 | None:intergenic |
| GACGATAAGTCGTGTGAAGA+AGG | 0.503045 | 3.1:-89251456 | MS.gene014526:CDS |
| GATGGAGATGTCCGAGGCCA+AGG | 0.503048 | 3.1:-89251219 | MS.gene014526:CDS |
| TGCCATATACCGTCTTTCTC+CGG | 0.503136 | 3.1:-89251798 | MS.gene014526:CDS |
| GAGCGACACATTTGAAAAGA+AGG | 0.503682 | 3.1:+89251857 | None:intergenic |
| AAACCTTCCTGCTTCGTCGC+CGG | 0.514759 | 3.1:-89251744 | MS.gene014526:CDS |
| TTGCTCCAAGTCCTTGGCCT+CGG | 0.515968 | 3.1:+89251208 | None:intergenic |
| AGCGACACATTTGAAAAGAA+GGG | 0.522344 | 3.1:+89251858 | None:intergenic |
| ATGACCTTTCCTCTTTCCCC+GGG | 0.522963 | 3.1:-89251832 | MS.gene014526:CDS |
| GGAGAAAGACGGTATATGGC+AGG | 0.531009 | 3.1:+89251800 | None:intergenic |
| TAGAAACTCACTTCTTCTTG+AGG | 0.531127 | 3.1:+89251649 | None:intergenic |
| TCATATGCTTTGGAGTTCAC+CGG | 0.541099 | 3.1:+89251779 | None:intergenic |
| CTAAATTCTAGAGATTATCA+TGG | 0.544872 | 3.1:-89251164 | MS.gene014526:CDS |
| GTCAAGTAGAATGGAGGAGA+AGG | 0.546067 | 3.1:-89251324 | MS.gene014526:CDS |
| GATTTCTTGAAGTCTTCGTA+AGG | 0.562850 | 3.1:+89251263 | None:intergenic |
| AATTGATAAAATCAATGAAG+AGG | 0.573253 | 3.1:-89251627 | MS.gene014526:CDS |
| AAGATTCTCGGAAGCCGAGA+AGG | 0.578226 | 3.1:-89251576 | MS.gene014526:CDS |
| AACTCCAAAGCATATGACAT+AGG | 0.582440 | 3.1:-89251773 | MS.gene014526:CDS |
| TCTTTGATGACACGTTGCAT+TGG | 0.597146 | 3.1:+89251717 | None:intergenic |
| TCTTCTTGAGGGAACGTCGG+AGG | 0.601171 | 3.1:+89251661 | None:intergenic |
| ACTCCAAAGCATATGACATA+GGG | 0.601832 | 3.1:-89251772 | MS.gene014526:CDS |
| TCGAAGAGGAACCGAAACGA+AGG | 0.602284 | 3.1:-89251351 | MS.gene014526:CDS |
| ATTAAGAAAGTGAAATCCAA+AGG | 0.608408 | 3.1:-89251695 | MS.gene014526:CDS |
| TGGAGTTCACCGGAGAAAGA+CGG | 0.608559 | 3.1:+89251789 | None:intergenic |
| GTTCCGGCGACGAAGCAGGA+AGG | 0.630275 | 3.1:+89251741 | None:intergenic |
| GATTCCCGGGGAAAGAGGAA+AGG | 0.637825 | 3.1:+89251828 | None:intergenic |
| GAGAAAGACGGTATATGGCA+GGG | 0.639308 | 3.1:+89251801 | None:intergenic |
| ACTTCTTCTTGAGGGAACGT+CGG | 0.649804 | 3.1:+89251658 | None:intergenic |
| AGTATTACGGAGAATCAAAG+AGG | 0.650942 | 3.1:-89251413 | MS.gene014526:CDS |
| TGGCAGGGCCTGGATTCCCG+GGG | 0.653477 | 3.1:+89251816 | None:intergenic |
| GGTTATGTCAAGTAGAATGG+AGG | 0.656874 | 3.1:-89251330 | MS.gene014526:CDS |
| AGAATGGAAGAGAATCGAAG+AGG | 0.657497 | 3.1:-89251365 | MS.gene014526:CDS |
| TCAAAGAGGAAAAGAAACGA+AGG | 0.672215 | 3.1:-89251399 | MS.gene014526:CDS |
| AGAAGAGATGGAGATGTCCG+AGG | 0.675634 | 3.1:-89251225 | MS.gene014526:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTGATAAAATCAATGAAG+AGG | - | chr3.1:89251318-89251337 | MS.gene014526:CDS | 20.0% |
| !! | CTCAAATTATAGTGATAAAA+AGG | - | chr3.1:89251435-89251454 | MS.gene014526:CDS | 20.0% |
| !!! | TTATCACTATAATTTGAGAT+AGG | + | chr3.1:89251433-89251452 | None:intergenic | 20.0% |
| ! | ATTAAGAAAGTGAAATCCAA+AGG | - | chr3.1:89251250-89251269 | MS.gene014526:CDS | 25.0% |
| ! | TCAAACAAATGTTCAAACTA+AGG | - | chr3.1:89251876-89251895 | MS.gene014526:CDS | 25.0% |
| !! | CTAAATTCTAGAGATTATCA+TGG | - | chr3.1:89251781-89251800 | MS.gene014526:CDS | 25.0% |
| !!! | TGAAGATTTTTTACTGACTT+AGG | + | chr3.1:89251859-89251878 | None:intergenic | 25.0% |
| ATTTAACTAGCTCGAATAGA+AGG | - | chr3.1:89251467-89251486 | MS.gene014526:CDS | 30.0% | |
| CTATGGATAGTACTAAAGTT+AGG | - | chr3.1:89251407-89251426 | MS.gene014526:CDS | 30.0% | |
| TATCCATAGTACTAGAAGAA+TGG | + | chr3.1:89251396-89251415 | None:intergenic | 30.0% | |
| ! | AGTGAGGTTTCAAAGTATTA+CGG | - | chr3.1:89251519-89251538 | MS.gene014526:CDS | 30.0% |
| AACTCCAAAGCATATGACAT+AGG | - | chr3.1:89251172-89251191 | MS.gene014526:CDS | 35.0% | |
| ACTCCAAAGCATATGACATA+GGG | - | chr3.1:89251173-89251192 | MS.gene014526:CDS | 35.0% | |
| ACTTGACATAACCTTCGTTT+CGG | + | chr3.1:89251560-89251579 | None:intergenic | 35.0% | |
| AGAAACTCACTTCTTCTTGA+GGG | + | chr3.1:89251298-89251317 | None:intergenic | 35.0% | |
| AGCGACACATTTGAAAAGAA+GGG | + | chr3.1:89251090-89251109 | None:intergenic | 35.0% | |
| AGTATTACGGAGAATCAAAG+AGG | - | chr3.1:89251532-89251551 | MS.gene014526:CDS | 35.0% | |
| ATACCCTATGTCATATGCTT+TGG | + | chr3.1:89251179-89251198 | None:intergenic | 35.0% | |
| GAAGGTTATGTCAAGTAGAA+TGG | - | chr3.1:89251564-89251583 | MS.gene014526:CDS | 35.0% | |
| GATTTCTTGAAGTCTTCGTA+AGG | + | chr3.1:89251685-89251704 | None:intergenic | 35.0% | |
| GTTAGAGATGATAGAAGAGA+TGG | - | chr3.1:89251708-89251727 | MS.gene014526:CDS | 35.0% | |
| TAGAAACTCACTTCTTCTTG+AGG | + | chr3.1:89251299-89251318 | None:intergenic | 35.0% | |
| TCAAAGAGGAAAAGAAACGA+AGG | - | chr3.1:89251546-89251565 | MS.gene014526:CDS | 35.0% | |
| TGCTTTGGTGAAAAAGTCAA+AGG | - | chr3.1:89251657-89251676 | MS.gene014526:CDS | 35.0% | |
| TTCTTGCTTAGCAAGATTCT+CGG | - | chr3.1:89251357-89251376 | MS.gene014526:CDS | 35.0% | |
| TTTGGCAACAAATGTTCGTT+TGG | - | chr3.1:89251830-89251849 | MS.gene014526:CDS | 35.0% | |
| !!! | GCAACTATTGCAGTGTTTTT+TGG | - | chr3.1:89251756-89251775 | MS.gene014526:CDS | 35.0% |
| ACTAGAAGAATGGACCTTCT+CGG | + | chr3.1:89251386-89251405 | None:intergenic | 40.0% | |
| AGAATGGAAGAGAATCGAAG+AGG | - | chr3.1:89251580-89251599 | MS.gene014526:CDS | 40.0% | |
| AGTAATTGTGCGAGCTTTCA+TGG | - | chr3.1:89251804-89251823 | MS.gene014526:CDS | 40.0% | |
| GAGCGACACATTTGAAAAGA+AGG | + | chr3.1:89251091-89251110 | None:intergenic | 40.0% | |
| GGCAAAAGAAAGCTTTGCTT+TGG | - | chr3.1:89251642-89251661 | MS.gene014526:CDS | 40.0% | |
| GGTCCATTCTTCTAGTACTA+TGG | - | chr3.1:89251390-89251409 | MS.gene014526:CDS | 40.0% | |
| GGTTATGTCAAGTAGAATGG+AGG | - | chr3.1:89251567-89251586 | MS.gene014526:CDS | 40.0% | |
| ! | TCTTTGATGACACGTTGCAT+TGG | + | chr3.1:89251231-89251250 | None:intergenic | 40.0% |
| !! | TCATATGCTTTGGAGTTCAC+CGG | + | chr3.1:89251169-89251188 | None:intergenic | 40.0% |
| AATGACCTTTCCTCTTTCCC+CGG | - | chr3.1:89251112-89251131 | MS.gene014526:CDS | 45.0% | |
| ACTTCTTCTTGAGGGAACGT+CGG | + | chr3.1:89251290-89251309 | None:intergenic | 45.0% | |
| CAATAGTTGCTCCAAGTCCT+TGG | + | chr3.1:89251746-89251765 | None:intergenic | 45.0% | |
| GACGATAAGTCGTGTGAAGA+AGG | - | chr3.1:89251489-89251508 | MS.gene014526:CDS | 45.0% | |
| GAGAAAGACGGTATATGGCA+GGG | + | chr3.1:89251147-89251166 | None:intergenic | 45.0% | |
| GTCAAGTAGAATGGAGGAGA+AGG | - | chr3.1:89251621-89251640 | MS.gene014526:CDS | 45.0% | |
| TGAAGAAGGTTGAGAGAGTG+AGG | - | chr3.1:89251503-89251522 | MS.gene014526:CDS | 45.0% | |
| TGCCATATACCGTCTTTCTC+CGG | - | chr3.1:89251147-89251166 | MS.gene014526:CDS | 45.0% | |
| TGCGAGCTTTCATGGAGATT+TGG | - | chr3.1:89251812-89251831 | MS.gene014526:CDS | 45.0% | |
| AAGATTCTCGGAAGCCGAGA+AGG | - | chr3.1:89251369-89251388 | MS.gene014526:CDS | 50.0% | |
| AGAAGAGATGGAGATGTCCG+AGG | - | chr3.1:89251720-89251739 | MS.gene014526:CDS | 50.0% | |
| ATGACCTTTCCTCTTTCCCC+GGG | - | chr3.1:89251113-89251132 | MS.gene014526:CDS | 50.0% | |
| CACCGGAGAAAGACGGTATA+TGG | + | chr3.1:89251152-89251171 | None:intergenic | 50.0% | |
| GGAGAAAGACGGTATATGGC+AGG | + | chr3.1:89251148-89251167 | None:intergenic | 50.0% | |
| GGGGAAAGAGGAAAGGTCAT+TGG | + | chr3.1:89251113-89251132 | None:intergenic | 50.0% | |
| TCGAAGAGGAACCGAAACGA+AGG | - | chr3.1:89251594-89251613 | MS.gene014526:CDS | 50.0% | |
| TGGAGTTCACCGGAGAAAGA+CGG | + | chr3.1:89251159-89251178 | None:intergenic | 50.0% | |
| ! | GACACGTTGCATTGGTGTTC+CGG | + | chr3.1:89251223-89251242 | None:intergenic | 50.0% |
| AAACCTTCCTGCTTCGTCGC+CGG | - | chr3.1:89251201-89251220 | MS.gene014526:CDS | 55.0% | |
| GATTCCCGGGGAAAGAGGAA+AGG | + | chr3.1:89251120-89251139 | None:intergenic | 55.0% | |
| TCTTCTTGAGGGAACGTCGG+AGG | + | chr3.1:89251287-89251306 | None:intergenic | 55.0% | |
| TTGCTCCAAGTCCTTGGCCT+CGG | + | chr3.1:89251740-89251759 | None:intergenic | 55.0% | |
| !!! | GAACGTCGGAGGTGCTTTTG+CGG | + | chr3.1:89251276-89251295 | None:intergenic | 55.0% |
| AGACGGTATATGGCAGGGCC+TGG | + | chr3.1:89251142-89251161 | None:intergenic | 60.0% | |
| GATGGAGATGTCCGAGGCCA+AGG | - | chr3.1:89251726-89251745 | MS.gene014526:CDS | 60.0% | |
| GATGTCCGAGGCCAAGGACT+TGG | - | chr3.1:89251732-89251751 | MS.gene014526:CDS | 60.0% | |
| GGCGACGAAGCAGGAAGGTT+TGG | + | chr3.1:89251202-89251221 | None:intergenic | 60.0% | |
| TATGGCAGGGCCTGGATTCC+CGG | + | chr3.1:89251134-89251153 | None:intergenic | 60.0% | |
| TCCTCTTTCCCCGGGAATCC+AGG | - | chr3.1:89251121-89251140 | MS.gene014526:CDS | 60.0% | |
| !!! | GGAGGTGCTTTTGCGGCCTT+TGG | + | chr3.1:89251269-89251288 | None:intergenic | 60.0% |
| ATGGCAGGGCCTGGATTCCC+GGG | + | chr3.1:89251133-89251152 | None:intergenic | 65.0% | |
| GCCTGGATTCCCGGGGAAAG+AGG | + | chr3.1:89251125-89251144 | None:intergenic | 65.0% | |
| GTTCCGGCGACGAAGCAGGA+AGG | + | chr3.1:89251207-89251226 | None:intergenic | 65.0% | |
| TGGTGTTCCGGCGACGAAGC+AGG | + | chr3.1:89251211-89251230 | None:intergenic | 65.0% | |
| TGGCAGGGCCTGGATTCCCG+GGG | + | chr3.1:89251132-89251151 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 89251055 | 89251912 | 89251055 | ID=MS.gene014526 |
| chr3.1 | mRNA | 89251055 | 89251912 | 89251055 | ID=MS.gene014526.t1;Parent=MS.gene014526 |
| chr3.1 | exon | 89251055 | 89251912 | 89251055 | ID=MS.gene014526.t1.exon1;Parent=MS.gene014526.t1 |
| chr3.1 | CDS | 89251055 | 89251912 | 89251055 | ID=cds.MS.gene014526.t1;Parent=MS.gene014526.t1 |
| Gene Sequence |
| Protein sequence |
