AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene01459

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene01459.t1 MTR_2g014260 92.273 660 30 5 14 661 238 888 0.0 1206
MS.gene01459.t1 MTR_2g014260 92.273 660 30 5 14 661 237 887 0.0 1206
MS.gene01459.t1 MTR_3g095960 43.182 88 50 0 574 661 902 989 7.73e-16 82.0
MS.gene01459.t1 MTR_3g095960 43.182 88 50 0 574 661 933 1020 8.63e-16 82.0
MS.gene01459.t1 MTR_8g093480 31.579 133 84 2 534 662 647 776 9.56e-14 75.1
MS.gene01459.t1 MTR_8g093480 31.579 133 84 2 534 662 604 733 1.13e-13 75.1
MS.gene01459.t1 MTR_2g060650 38.372 86 53 0 579 664 1362 1447 6.12e-13 72.8
MS.gene01459.t1 MTR_8g093480 32.031 128 80 2 534 657 647 771 6.22e-13 72.8
MS.gene01459.t1 MTR_8g093480 32.031 128 80 2 534 657 604 728 7.85e-13 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene01459.t1 AT2G33835 29.594 517 266 19 214 661 96 583 3.56e-39 153
MS.gene01459.t1 AT3G18640 42.169 83 48 0 579 661 590 672 5.11e-15 79.3
MS.gene01459.t1 AT3G18640 42.169 83 48 0 579 661 590 672 5.11e-15 79.3
MS.gene01459.t1 AT3G18640 42.169 83 48 0 579 661 590 672 5.11e-15 79.3
MS.gene01459.t1 AT3G26850 40.476 84 50 0 581 664 181 264 8.03e-14 72.8
MS.gene01459.t1 AT3G26850 40.476 84 50 0 581 664 181 264 8.03e-14 72.8
MS.gene01459.t1 AT2G10553 41.026 78 46 0 584 661 1 78 1.03e-13 67.4

Find 132 sgRNAs with CRISPR-Local

Find 293 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACTGAAAACCCGTTCTAAT+TGG 0.146947 2.2:+68609669 MS.gene01459:CDS
AACGTTGATGTTGAAAATTC+TGG 0.195896 2.2:+68608496 MS.gene01459:CDS
AGAGACCCATCTCCAATATT+TGG 0.208217 2.2:-68609791 None:intergenic
AAGAGTTGCTAAAACCATTT+TGG 0.214650 2.2:+68610287 MS.gene01459:CDS
CTGAAGAGAAAGAGGATTTA+TGG 0.227339 2.2:-68609586 None:intergenic
TAATGTGATGGCCGTACTTC+AGG 0.259079 2.2:-68608310 None:intergenic
CCACACCTATGTCACCATTT+TGG 0.265214 2.2:-68610045 None:intergenic
ACCTTTAGGTGCAAGTGCTT+TGG 0.308934 2.2:+68609553 MS.gene01459:CDS
TATCTTCAGTGGTCGGAATT+TGG 0.312793 2.2:-68610393 None:intergenic
AGAGAATTGGAATTGGAAAA+AGG 0.326337 2.2:+68609115 MS.gene01459:CDS
TCCTGATGTTATCTCTGCTT+TGG 0.335129 2.2:-68610008 None:intergenic
TCTGCATCGGGCAGAGAATC+TGG 0.335633 2.2:-68607086 None:intergenic
AGTACGGCCATCACATTATA+TGG 0.337928 2.2:+68608315 MS.gene01459:CDS
TTAAATGCAGATTTATTCTC+TGG 0.353007 2.2:-68609410 None:intergenic
AAAGCTTCCCTTCTAATTAG+AGG 0.355973 2.2:+68609815 MS.gene01459:CDS
AATTAGAGGGTCATCCGTTC+AGG 0.358517 2.2:+68609829 MS.gene01459:CDS
AGACGACCCTCATGCCAAAA+TGG 0.368470 2.2:-68610301 None:intergenic
CCATGAGATGGATGCCAACT+TGG 0.370434 2.2:-68609353 None:intergenic
ATGCCTTTGGTGTTGAAGAT+AGG 0.370980 2.2:+68610074 MS.gene01459:CDS
AGCATTGAGATACCAAATAT+TGG 0.373167 2.2:+68609779 MS.gene01459:CDS
GGATAATAAATTTCATGAAA+TGG 0.373961 2.2:+68610180 MS.gene01459:CDS
TGGCCGTACTTCAGGGTTCT+CGG 0.379969 2.2:-68608302 None:intergenic
AGCTTCTTTATCTGATGTTA+AGG 0.382480 2.2:+68608573 MS.gene01459:CDS
ACGGGAAAAGATGTGGTTAC+TGG 0.386220 2.2:+68608619 MS.gene01459:CDS
TCAGAAGAGAGAATTGGAAT+TGG 0.391834 2.2:+68609108 MS.gene01459:CDS
CGAGGAACAGAACTTCTGTT+TGG 0.394825 2.2:-68609965 None:intergenic
CGGATGACCCTCTAATTAGA+AGG 0.396020 2.2:-68609823 None:intergenic
GAAGCTTTGCTATTGCAATC+TGG 0.406483 2.2:-68608556 None:intergenic
TGAAGAGAAAGAGGATTTAT+GGG 0.410865 2.2:-68609585 None:intergenic
AAGAGGGTCATAAAGATCTC+TGG 0.414544 2.2:-68609750 None:intergenic
ACTGAAAACCCGTTCTAATT+GGG 0.418464 2.2:+68609670 MS.gene01459:CDS
AGTTGTGCAAACTACCAAAA+TGG 0.421565 2.2:+68610031 MS.gene01459:CDS
CTACCATGACCAGACCTTGA+TGG 0.426349 2.2:-68608748 None:intergenic
TTTCCCTGTAACAGGTGTTA+AGG 0.435675 2.2:+68609205 MS.gene01459:intron
AACTTGATTTCTGCTGAAGA+TGG 0.439277 2.2:+68608457 MS.gene01459:CDS
TGTAGATTCAAGCCAACATA+TGG 0.439592 2.2:+68608234 MS.gene01459:intron
TCCATCTTTAATCTCAGCAC+TGG 0.439675 2.2:-68608948 None:intergenic
AGGGTTGCACCACATGCTAA+TGG 0.439793 2.2:+68609641 MS.gene01459:CDS
TGCACATCAGAAGAGAGAAT+TGG 0.443524 2.2:+68609102 MS.gene01459:CDS
ATCCTCTTTCTCTTCAGATC+GGG 0.443545 2.2:+68609592 MS.gene01459:CDS
AGCAATATGTTTCTTTATGT+CGG 0.448405 2.2:+68610422 MS.gene01459:CDS
TTCATCTAGTTGGTTCATCT+AGG 0.451325 2.2:+68609621 MS.gene01459:CDS
TCATCTAGTTGGTTCATCTA+GGG 0.454338 2.2:+68609622 MS.gene01459:CDS
TGATTGCATAACTTTCTCCT+TGG 0.455572 2.2:-68608692 None:intergenic
TTGCTACGTTTATCTGCATC+GGG 0.457556 2.2:-68607098 None:intergenic
GGCCGTACTTCAGGGTTCTC+GGG 0.459568 2.2:-68608301 None:intergenic
AGAAGGTTCCCAATTAGAAC+GGG 0.465289 2.2:-68609678 None:intergenic
CACCAAGTCATCTAGTGATA+CGG 0.475093 2.2:+68608600 MS.gene01459:CDS
TGATGTGAAAGAGGAGAACT+TGG 0.477135 2.2:+68608261 MS.gene01459:CDS
CCCAGTGCTGAGATTAAAGA+TGG 0.477210 2.2:+68608947 MS.gene01459:CDS
CTCTGCACGGGATGAATATG+AGG 0.483485 2.2:-68609465 None:intergenic
TTTGCTACGTTTATCTGCAT+CGG 0.483721 2.2:-68607099 None:intergenic
GAGATACCAAATATTGGAGA+TGG 0.486987 2.2:+68609785 MS.gene01459:CDS
ACTTGATTTCTGCTGAAGAT+GGG 0.490752 2.2:+68608458 MS.gene01459:CDS
AATGTGATGGCCGTACTTCA+GGG 0.491889 2.2:-68608309 None:intergenic
TGGTTCACTGCATCCTTCAG+TGG 0.492124 2.2:-68608536 None:intergenic
TTCCCGATCTGAAGAGAAAG+AGG 0.494946 2.2:-68609594 None:intergenic
CCAAGTTGGCATCCATCTCA+TGG 0.499349 2.2:+68609353 MS.gene01459:CDS
TCCCGTATCACTAGATGACT+TGG 0.504697 2.2:-68608602 None:intergenic
CCATCTTTAATCTCAGCACT+GGG 0.507231 2.2:-68608947 None:intergenic
TATATCCTCTGTACATATGT+TGG 0.511338 2.2:-68609508 None:intergenic
AGAGGGTCATAAAGATCTCT+GGG 0.511884 2.2:-68609749 None:intergenic
TCCAAAGCACTTGCACCTAA+AGG 0.515626 2.2:-68609554 None:intergenic
AATCCTCTTTCTCTTCAGAT+CGG 0.517995 2.2:+68609591 MS.gene01459:CDS
AGCAATAGATATGGAAGTGG+AGG 0.529583 2.2:+68607013 None:intergenic
TCCTCAACAAAATTATCTCT+CGG 0.531272 2.2:-68608649 None:intergenic
TCACATCAAGCTCCATATGT+TGG 0.531391 2.2:-68608246 None:intergenic
ATGTGAAACAAAAGCCATCA+AGG 0.533118 2.2:+68608734 MS.gene01459:CDS
ACCAAGTCATCTAGTGATAC+GGG 0.535354 2.2:+68608601 MS.gene01459:CDS
ACCAAAGCAGAGATAACATC+AGG 0.539299 2.2:+68610007 MS.gene01459:CDS
TATGGAGCTTGATGTGAAAG+AGG 0.541245 2.2:+68608252 MS.gene01459:CDS
TGCCCGAGAACCCTGAAGTA+CGG 0.541918 2.2:+68608299 MS.gene01459:CDS
AGCAATCATTTCCTCTGCAC+GGG 0.546220 2.2:-68609477 None:intergenic
AGAACAAGAAACAGTTGTAG+AGG 0.548644 2.2:+68607037 MS.gene01459:CDS
GGAAACAAGCTGTCCCTCAT+CGG 0.553716 2.2:-68609389 None:intergenic
TATGATGATTCTGCTGCAGT+TGG 0.555386 2.2:+68609872 MS.gene01459:CDS
AAGCTTCCCTTCTAATTAGA+GGG 0.556317 2.2:+68609816 MS.gene01459:CDS
TTCTCTTCCATATAATGTGA+TGG 0.556995 2.2:-68608322 None:intergenic
CGTATCACTAGATGACTTGG+TGG 0.557776 2.2:-68608599 None:intergenic
TAGCAATCATTTCCTCTGCA+CGG 0.558599 2.2:-68609478 None:intergenic
GGTGTGGGACAATATGCCTT+TGG 0.558890 2.2:+68610061 MS.gene01459:CDS
GAGGTTGACTTTCAGACAGA+TGG 0.560149 2.2:+68610202 MS.gene01459:CDS
TAATAAATTTCATGAAATGG+AGG 0.564842 2.2:+68610183 MS.gene01459:CDS
CAGAAGGTTCCCAATTAGAA+CGG 0.565372 2.2:-68609679 None:intergenic
AGATGCTTTACTCATGCTCA+TGG 0.570346 2.2:-68608350 None:intergenic
CTCATATTCATCCCGTGCAG+AGG 0.570912 2.2:+68609466 MS.gene01459:CDS
AGAAGCAATAGATATGGAAG+TGG 0.572851 2.2:+68607010 None:intergenic
GATGGTCGAAATGGAACAGA+AGG 0.573242 2.2:-68609695 None:intergenic
AACTACCAAAATGGTGACAT+AGG 0.578382 2.2:+68610040 MS.gene01459:CDS
TATCCTATCTTCAACACCAA+AGG 0.584215 2.2:-68610077 None:intergenic
AATGTCAATTCCTCATGCAA+CGG 0.586889 2.2:-68608376 None:intergenic
AAAAGAGAAGTTTCCGATGA+GGG 0.587730 2.2:+68609376 MS.gene01459:CDS
AAAATTCTGGACATCTTCAG+AGG 0.589780 2.2:+68608509 MS.gene01459:CDS
CAAGATCAACAAGGACTGCA+TGG 0.589786 2.2:-68610261 None:intergenic
AGATACCAAATATTGGAGAT+GGG 0.592018 2.2:+68609786 MS.gene01459:CDS
GTGTTAAGGAAAATGTTGAC+AGG 0.595611 2.2:+68609219 MS.gene01459:CDS
ATGATGATTCTGCTGCAGTT+GGG 0.600513 2.2:+68609873 MS.gene01459:CDS
TGGAAGAAGCAAGTCCAAGT+TGG 0.600753 2.2:+68609339 MS.gene01459:CDS
CCAAAATGGTGACATAGGTG+TGG 0.606094 2.2:+68610045 MS.gene01459:CDS
TTAGCAGTATCTTCAGTGGT+CGG 0.606678 2.2:-68610400 None:intergenic
AACTTGTGATGAAGCCTGAA+CGG 0.612804 2.2:-68609843 None:intergenic
TAGTGTGAATAATACCGACC+AGG 0.615469 2.2:+68609057 MS.gene01459:CDS
AACGGACTGAGCATGATGCT+AGG 0.615927 2.2:+68610113 MS.gene01459:CDS
CTTCAGAGGAAAACCACTGA+AGG 0.618372 2.2:+68608523 MS.gene01459:CDS
GGATGACCCTCTAATTAGAA+GGG 0.619254 2.2:-68609822 None:intergenic
AAATGTTGACAGGTCAAGAA+CGG 0.621080 2.2:+68609229 MS.gene01459:CDS
GATGTGAAAGAGGAGAACTT+GGG 0.624477 2.2:+68608262 MS.gene01459:CDS
GCTAAAGGTTGGTGCATCCG+AGG 0.627168 2.2:+68609004 MS.gene01459:CDS
AGCATCTGTTCCGTTGCATG+AGG 0.628622 2.2:+68608366 MS.gene01459:CDS
TAGTGATACGGGAAAAGATG+TGG 0.628779 2.2:+68608612 MS.gene01459:CDS
AGTGTGAATAATACCGACCA+GGG 0.630924 2.2:+68609058 MS.gene01459:CDS
ATCTCAATGCTATCACGAAG+AGG 0.632520 2.2:-68609767 None:intergenic
AGTGTATATCCATTAGCATG+TGG 0.634510 2.2:-68609650 None:intergenic
TTGCTTAGCAGTATCTTCAG+TGG 0.635718 2.2:-68610404 None:intergenic
GATGCAGATAAACGTAGCAA+AGG 0.640040 2.2:+68607101 MS.gene01459:CDS
GAAAAGAGAAGTTTCCGATG+AGG 0.640988 2.2:+68609375 MS.gene01459:CDS
TCTCAATGCTATCACGAAGA+GGG 0.642743 2.2:-68609766 None:intergenic
GCATGAGGGTCGTCTCAGCA+AGG 0.648486 2.2:+68610309 MS.gene01459:CDS
TCAGTGGTCGGAATTTGGCG+TGG 0.649706 2.2:-68610388 None:intergenic
GGAAGCTACAAGAACTACCT+CGG 0.649982 2.2:-68609021 None:intergenic
ATGTGAAAGAGGAGAACTTG+GGG 0.650828 2.2:+68608263 MS.gene01459:CDS
CAAAATGGTGACATAGGTGT+GGG 0.653939 2.2:+68610046 MS.gene01459:CDS
TTTGTTGAGGATGCTGATGG+TGG 0.658081 2.2:+68608661 MS.gene01459:CDS
TGATGGTGGTCAGAACTCCA+AGG 0.667489 2.2:+68608675 MS.gene01459:CDS
AACAGAAGTTCTGTTCCTCG+CGG 0.678826 2.2:+68609968 MS.gene01459:CDS
CGAAACCAACATATGTACAG+AGG 0.688687 2.2:+68609503 MS.gene01459:CDS
AGGGTCATAAAGATCTCTGG+GGG 0.694830 2.2:-68609747 None:intergenic
AATTGCTAAACTCTACAGCA+CGG 0.702986 2.2:-68611047 None:intergenic
TGTGAATAATACCGACCAGG+GGG 0.710305 2.2:+68609060 MS.gene01459:CDS
GTGTGAATAATACCGACCAG+GGG 0.716425 2.2:+68609059 MS.gene01459:CDS
ACTCTTTCACAAGATCAACA+AGG 0.723096 2.2:-68610270 None:intergenic
GAGGGTCATAAAGATCTCTG+GGG 0.728908 2.2:-68609748 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGATAAACTATAAAAATAT+TGG - chr2.2:68608119-68608138 None:intergenic 10.0%
!!! ATTTTCATAAAACTTATGAT+GGG - chr2.2:68609942-68609961 None:intergenic 15.0%
!! ACATCACAATTAAAAAATGA+TGG - chr2.2:68607866-68607885 None:intergenic 20.0%
!! ATTCATAGAAGTGATAAAAA+AGG - chr2.2:68609720-68609739 None:intergenic 20.0%
!! GGATAATAAATTTCATGAAA+TGG + chr2.2:68610180-68610199 MS.gene01459:CDS 20.0%
!! TAATAAATTTCATGAAATGG+AGG + chr2.2:68610183-68610202 MS.gene01459:CDS 20.0%
!! TATGAAATGATTTAAAGAAG+AGG + chr2.2:68608171-68608190 MS.gene01459:intron 20.0%
!! TCAAAATTACTAAACATTGA+GGG - chr2.2:68607750-68607769 None:intergenic 20.0%
!! TCAATACTATGAACAATAAA+GGG - chr2.2:68607283-68607302 None:intergenic 20.0%
!! TTATTAGAAATATGCACAAA+GGG - chr2.2:68609180-68609199 None:intergenic 20.0%
!! TTCAATACTATGAACAATAA+AGG - chr2.2:68607284-68607303 None:intergenic 20.0%
!! TTTATTAGAAATATGCACAA+AGG - chr2.2:68609181-68609200 None:intergenic 20.0%
!!! ATGCAGTGTAAATTAAATTT+TGG - chr2.2:68608809-68608828 None:intergenic 20.0%
!!! CATTTTCATAAAACTTATGA+TGG - chr2.2:68609943-68609962 None:intergenic 20.0%
!!! GGTATATCAAATAATTTGTT+TGG + chr2.2:68609136-68609155 MS.gene01459:intron 20.0%
!!! TCATAGTATTGAATATTGAT+AGG + chr2.2:68607291-68607310 MS.gene01459:intron 20.0%
!!! TCATTTTTTAATTGTGATGT+TGG + chr2.2:68607866-68607885 MS.gene01459:intron 20.0%
!!! TTTGTGCATATTTCTAATAA+AGG + chr2.2:68609180-68609199 MS.gene01459:intron 20.0%
! AAAATCATAAAGCACAAGAT+AGG - chr2.2:68607841-68607860 None:intergenic 25.0%
! AAATTTATGAGTGAAGTCTA+TGG + chr2.2:68608039-68608058 MS.gene01459:intron 25.0%
! AACAAAAACTGTGCAAAAAA+AGG - chr2.2:68610480-68610499 None:intergenic 25.0%
! AGCAATATGTTTCTTTATGT+CGG + chr2.2:68610422-68610441 MS.gene01459:CDS 25.0%
! AGTTAAAAAATCAGTTGACA+AGG + chr2.2:68610348-68610367 MS.gene01459:CDS 25.0%
! ATAGAAGTGATAAAAAAGGA+TGG - chr2.2:68609716-68609735 None:intergenic 25.0%
! ATCTATTCTGTCAAATCAAA+CGG - chr2.2:68610542-68610561 None:intergenic 25.0%
! CAAAAAAAATAGAGTAGCAA+AGG + chr2.2:68610159-68610178 MS.gene01459:CDS 25.0%
! CAATACTATGAACAATAAAG+GGG - chr2.2:68607282-68607301 None:intergenic 25.0%
! CATTTATTATGAGAACTATG+TGG - chr2.2:68607581-68607600 None:intergenic 25.0%
! CTTCGTAATAAAGTAAATCA+CGG - chr2.2:68607911-68607930 None:intergenic 25.0%
! GAAAGATAAAGAGAAAAATG+AGG + chr2.2:68607061-68607080 MS.gene01459:CDS 25.0%
! GTCAAAATTACTAAACATTG+AGG - chr2.2:68607751-68607770 None:intergenic 25.0%
! GTTACTTGTTTAGCAATATT+TGG + chr2.2:68610894-68610913 MS.gene01459:intron 25.0%
! TATTAGAAATATGCACAAAG+GGG - chr2.2:68609179-68609198 None:intergenic 25.0%
! TTAAATGCAGATTTATTCTC+TGG - chr2.2:68609413-68609432 None:intergenic 25.0%
! TTTATAGTTTATCTTGTGAG+AGG + chr2.2:68608124-68608143 MS.gene01459:intron 25.0%
! TTTCATGCATATGAAAAATC+TGG + chr2.2:68610988-68611007 MS.gene01459:intron 25.0%
!! AAAAAAGCACATATAATTGC+AGG - chr2.2:68608983-68609002 None:intergenic 25.0%
!! AATTTTCAACATCAACGTTT+AGG - chr2.2:68608495-68608514 None:intergenic 25.0%
!! AGACTTCACTCATAAATTTT+TGG - chr2.2:68608038-68608057 None:intergenic 25.0%
!! GACTTCACTCATAAATTTTT+GGG - chr2.2:68608037-68608056 None:intergenic 25.0%
!!! AAAGATTTTAGTTCACCTTT+AGG + chr2.2:68609539-68609558 MS.gene01459:CDS 25.0%
!!! ACTAGAAACTTTTTGTTTCA+GGG - chr2.2:68608419-68608438 None:intergenic 25.0%
!!! AGATATATATTTTTGTGTGC+AGG + chr2.2:68610558-68610577 MS.gene01459:intron 25.0%
!!! ATATGTGCTTTTTTTGCTAA+AGG + chr2.2:68608989-68609008 MS.gene01459:CDS 25.0%
!!! CAGTTTTTGTTATTTGTCAA+TGG + chr2.2:68610489-68610508 MS.gene01459:intron 25.0%
!!! GATATATATTTTTGTGTGCA+GGG + chr2.2:68610559-68610578 MS.gene01459:intron 25.0%
!!! TGTACAAAAAAGAGGTATTT+GGG - chr2.2:68610621-68610640 None:intergenic 25.0%
!!! TTTTTTGTACAGTTTCTGTT+TGG + chr2.2:68610630-68610649 MS.gene01459:intron 25.0%
AAAAAAAAGATAGCCTCAGA+CGG - chr2.2:68610679-68610698 None:intergenic 30.0%
AACGTTGATGTTGAAAATTC+TGG + chr2.2:68608496-68608515 MS.gene01459:CDS 30.0%
ACAGAAACTGTACAAAAAAG+AGG - chr2.2:68610629-68610648 None:intergenic 30.0%
AGAGAATTGGAATTGGAAAA+AGG + chr2.2:68609115-68609134 MS.gene01459:CDS 30.0%
AGATACCAAATATTGGAGAT+GGG + chr2.2:68609786-68609805 MS.gene01459:CDS 30.0%
AGCTTCTTTATCTGATGTTA+AGG + chr2.2:68608573-68608592 MS.gene01459:CDS 30.0%
ATAAAAAAGGATGGTCGAAA+TGG - chr2.2:68609707-68609726 None:intergenic 30.0%
ATAATGATAGAGACTATGTG+TGG - chr2.2:68608881-68608900 None:intergenic 30.0%
ATTACTAAACATTGAGGGAT+TGG - chr2.2:68607745-68607764 None:intergenic 30.0%
CATTTCATACAGACAATAGA+CGG - chr2.2:68608160-68608179 None:intergenic 30.0%
CTTCTATGAAAAGCAGTAAA+TGG - chr2.2:68609269-68609288 None:intergenic 30.0%
CTTGAATTGCATGGTTTATA+AGG + chr2.2:68610841-68610860 MS.gene01459:intron 30.0%
GAAAATAAATGTGCCAGTAA+AGG - chr2.2:68607183-68607202 None:intergenic 30.0%
GGACTAATTTATGTTGTTAG+AGG - chr2.2:68608860-68608879 None:intergenic 30.0%
GGATAGAAACACTGAAAAAA+CGG + chr2.2:68610095-68610114 MS.gene01459:CDS 30.0%
TATATCCTCTGTACATATGT+TGG - chr2.2:68609511-68609530 None:intergenic 30.0%
TCCTCAACAAAATTATCTCT+CGG - chr2.2:68608652-68608671 None:intergenic 30.0%
TCTAGCATTCAACTTTGTAA+AGG + chr2.2:68607526-68607545 MS.gene01459:intron 30.0%
TGAAGAGAAAGAGGATTTAT+GGG - chr2.2:68609588-68609607 None:intergenic 30.0%
TTCTCTTCCATATAATGTGA+TGG - chr2.2:68608325-68608344 None:intergenic 30.0%
TTGAATGCTAGATACATCTA+TGG - chr2.2:68607518-68607537 None:intergenic 30.0%
! AAGAGTTGCTAAAACCATTT+TGG + chr2.2:68610287-68610306 MS.gene01459:CDS 30.0%
! AAGTTTGAAATGAACCTGAT+AGG + chr2.2:68607640-68607659 MS.gene01459:intron 30.0%
! AGCATTGAGATACCAAATAT+TGG + chr2.2:68609779-68609798 MS.gene01459:CDS 30.0%
! ATCAAGTTTTCACTTGGTTT+TGG - chr2.2:68608445-68608464 None:intergenic 30.0%
! TATTTGTCAATGGAAGTACA+TGG + chr2.2:68610499-68610518 MS.gene01459:intron 30.0%
! TCACACTATCTTTTACATGA+AGG - chr2.2:68609045-68609064 None:intergenic 30.0%
! TGGACTAACTTTGCAATTTT+TGG - chr2.2:68610448-68610467 None:intergenic 30.0%
! TTCTTGATTTGATCCTTTAC+TGG + chr2.2:68607167-68607186 MS.gene01459:intron 30.0%
! TTTCATAGTCAAGGTTGATT+TGG + chr2.2:68610737-68610756 MS.gene01459:intron 30.0%
!! CTAGAAACTTTTTGTTTCAG+GGG - chr2.2:68608418-68608437 None:intergenic 30.0%
!! CTGTACAAAAAAGAGGTATT+TGG - chr2.2:68610622-68610641 None:intergenic 30.0%
!! GACTAGAAACTTTTTGTTTC+AGG - chr2.2:68608420-68608439 None:intergenic 30.0%
!! GATAGGTATTGAATATATCC+TGG + chr2.2:68607308-68607327 MS.gene01459:intron 30.0%
!! TTTTAATTGTGATGTTGGTC+TGG + chr2.2:68607871-68607890 MS.gene01459:intron 30.0%
AAAAGAGAAGTTTCCGATGA+GGG + chr2.2:68609376-68609395 MS.gene01459:CDS 35.0%
AAAATTCTGGACATCTTCAG+AGG + chr2.2:68608509-68608528 MS.gene01459:CDS 35.0%
AAAGCTTCCCTTCTAATTAG+AGG + chr2.2:68609815-68609834 MS.gene01459:CDS 35.0%
AAATGTTGACAGGTCAAGAA+CGG + chr2.2:68609229-68609248 MS.gene01459:CDS 35.0%
AACTACCAAAATGGTGACAT+AGG + chr2.2:68610040-68610059 MS.gene01459:CDS 35.0%
AACTTGATTTCTGCTGAAGA+TGG + chr2.2:68608457-68608476 MS.gene01459:CDS 35.0%
AAGCTTCCCTTCTAATTAGA+GGG + chr2.2:68609816-68609835 MS.gene01459:CDS 35.0%
AATCCTCTTTCTCTTCAGAT+CGG + chr2.2:68609591-68609610 MS.gene01459:CDS 35.0%
AATGTCAATTCCTCATGCAA+CGG - chr2.2:68608379-68608398 None:intergenic 35.0%
AATTGCTAAACTCTACAGCA+CGG - chr2.2:68611050-68611069 None:intergenic 35.0%
ACTCTTTCACAAGATCAACA+AGG - chr2.2:68610273-68610292 None:intergenic 35.0%
ACTGAAAACCCGTTCTAATT+GGG + chr2.2:68609670-68609689 MS.gene01459:CDS 35.0%
ACTTGATTTCTGCTGAAGAT+GGG + chr2.2:68608458-68608477 MS.gene01459:CDS 35.0%
AGAACAAGAAACAGTTGTAG+AGG + chr2.2:68607037-68607056 MS.gene01459:CDS 35.0%
AGCATTCAACTTTGTAAAGG+AGG + chr2.2:68607529-68607548 MS.gene01459:intron 35.0%
AGGAAAATTCAACCTTGTAG+TGG + chr2.2:68607391-68607410 MS.gene01459:intron 35.0%
AGTGTATATCCATTAGCATG+TGG - chr2.2:68609653-68609672 None:intergenic 35.0%
AGTTGTGCAAACTACCAAAA+TGG + chr2.2:68610031-68610050 MS.gene01459:CDS 35.0%
ATATATCCTGGTTATGCCTT+TGG + chr2.2:68607320-68607339 MS.gene01459:intron 35.0%
ATGTGAAACAAAAGCCATCA+AGG + chr2.2:68608734-68608753 MS.gene01459:CDS 35.0%
ATTCAACTTTGTAAAGGAGG+TGG + chr2.2:68607532-68607551 MS.gene01459:intron 35.0%
CAGGGATATGTCAATAAACA+TGG + chr2.2:68610577-68610596 MS.gene01459:intron 35.0%
CCAGGTCACGAAATTTATTA+AGG - chr2.2:68607205-68607224 None:intergenic 35.0%
CCTTAATAAATTTCGTGACC+TGG + chr2.2:68607202-68607221 MS.gene01459:intron 35.0%
CTGAAGAGAAAGAGGATTTA+TGG - chr2.2:68609589-68609608 None:intergenic 35.0%
GAAAGTTATGCAATCAGAGA+TGG + chr2.2:68608699-68608718 MS.gene01459:intron 35.0%
GAACAATAAAGGGGTTTGAA+GGG - chr2.2:68607273-68607292 None:intergenic 35.0%
GAGATACCAAATATTGGAGA+TGG + chr2.2:68609785-68609804 MS.gene01459:CDS 35.0%
GCAAAAAAAGGACACTTACA+TGG - chr2.2:68610468-68610487 None:intergenic 35.0%
GGATTCAACTGAATAAAGCT+AGG - chr2.2:68607704-68607723 None:intergenic 35.0%
GTGTTAAGGAAAATGTTGAC+AGG + chr2.2:68609219-68609238 MS.gene01459:CDS 35.0%
TATCCTATCTTCAACACCAA+AGG - chr2.2:68610080-68610099 None:intergenic 35.0%
TATTCTGTCAAATCAAACGG+AGG - chr2.2:68610539-68610558 None:intergenic 35.0%
TCAGAAGAGAGAATTGGAAT+TGG + chr2.2:68609108-68609127 MS.gene01459:CDS 35.0%
TGAACAATAAAGGGGTTTGA+AGG - chr2.2:68607274-68607293 None:intergenic 35.0%
TGATTGCATAACTTTCTCCT+TGG - chr2.2:68608695-68608714 None:intergenic 35.0%
TGTAGATTCAAGCCAACATA+TGG + chr2.2:68608234-68608253 MS.gene01459:intron 35.0%
TTTCCTTAACACCTGTTACA+GGG - chr2.2:68609211-68609230 None:intergenic 35.0%
TTTGCTACGTTTATCTGCAT+CGG - chr2.2:68607102-68607121 None:intergenic 35.0%
! AACTTCTCTTTTCCATGAGA+TGG - chr2.2:68609368-68609387 None:intergenic 35.0%
! AATTTTGTTGAGGATGCTGA+TGG + chr2.2:68608658-68608677 MS.gene01459:CDS 35.0%
! ACCGAGAGATAATTTTGTTG+AGG + chr2.2:68608648-68608667 MS.gene01459:CDS 35.0%
! ACTACAAGGTTGAATTTTCC+TGG - chr2.2:68607392-68607411 None:intergenic 35.0%
! CTTTTGCAGCTCTTATAGAA+GGG + chr2.2:68607436-68607455 MS.gene01459:intron 35.0%
! GCAGAAATCAAGTTTTCACT+TGG - chr2.2:68608451-68608470 None:intergenic 35.0%
! GGAGATTTTACGAGTTTACT+TGG + chr2.2:68608060-68608079 MS.gene01459:intron 35.0%
! GTTGAATTTTCCTGGTTCAA+GGG - chr2.2:68607384-68607403 None:intergenic 35.0%
! TCATCTAGTTGGTTCATCTA+GGG + chr2.2:68609622-68609641 MS.gene01459:CDS 35.0%
! TCTTTTGCAGCTCTTATAGA+AGG + chr2.2:68607435-68607454 MS.gene01459:intron 35.0%
! TTCATCTAGTTGGTTCATCT+AGG + chr2.2:68609621-68609640 MS.gene01459:CDS 35.0%
! TTTTCCTTAACACCTGTTAC+AGG - chr2.2:68609212-68609231 None:intergenic 35.0%
!! CTAAAACCATTTTGGCATGA+GGG + chr2.2:68610295-68610314 MS.gene01459:CDS 35.0%
!! TGTTCCATTCTGAAGTAAAC+TGG + chr2.2:68610818-68610837 MS.gene01459:intron 35.0%
!!! AAGTTTTCACTTGGTTTTGG+AGG - chr2.2:68608442-68608461 None:intergenic 35.0%
!!! GTGCTTTTTTTGCTAAAGGT+TGG + chr2.2:68608993-68609012 MS.gene01459:CDS 35.0%
!!! TTTTTTTGTAAAGACGGTGG+TGG + chr2.2:68611023-68611042 MS.gene01459:intron 35.0%
AAACAAAAGCCATCAAGGTC+TGG + chr2.2:68608739-68608758 MS.gene01459:intron 40.0%
AACTACACATGCTGATCCAA+AGG - chr2.2:68607339-68607358 None:intergenic 40.0%
AACTTGTGATGAAGCCTGAA+CGG - chr2.2:68609846-68609865 None:intergenic 40.0%
AAGAGGGTCATAAAGATCTC+TGG - chr2.2:68609753-68609772 None:intergenic 40.0%
ACCAAAGCAGAGATAACATC+AGG + chr2.2:68610007-68610026 MS.gene01459:CDS 40.0%
ACCAAGTCATCTAGTGATAC+GGG + chr2.2:68608601-68608620 MS.gene01459:CDS 40.0%
ACGATACAGAAGTTTGGCAT+TGG - chr2.2:68607489-68607508 None:intergenic 40.0%
AGAAGGTTCCCAATTAGAAC+GGG - chr2.2:68609681-68609700 None:intergenic 40.0%
AGACGGAAGTTGTCATGAAT+TGG - chr2.2:68610662-68610681 None:intergenic 40.0%
AGACTTCTAGTCCTGCTATT+AGG - chr2.2:68608923-68608942 None:intergenic 40.0%
AGAGACCCATCTCCAATATT+TGG - chr2.2:68609794-68609813 None:intergenic 40.0%
AGAGGGTCATAAAGATCTCT+GGG - chr2.2:68609752-68609771 None:intergenic 40.0%
AGATGCTTTACTCATGCTCA+TGG - chr2.2:68608353-68608372 None:intergenic 40.0%
AGTACGGCCATCACATTATA+TGG + chr2.2:68608315-68608334 MS.gene01459:CDS 40.0%
AGTCAGACGATACAGAAGTT+TGG - chr2.2:68607495-68607514 None:intergenic 40.0%
AGTGTGAATAATACCGACCA+GGG + chr2.2:68609058-68609077 MS.gene01459:CDS 40.0%
ATACAGACAATAGACGGAAG+TGG - chr2.2:68608154-68608173 None:intergenic 40.0%
ATCCTCTTTCTCTTCAGATC+GGG + chr2.2:68609592-68609611 MS.gene01459:CDS 40.0%
ATCTCAATGCTATCACGAAG+AGG - chr2.2:68609770-68609789 None:intergenic 40.0%
ATGAAACAGATAGCCTCAGA+CGG - chr2.2:68610723-68610742 None:intergenic 40.0%
ATGAACCTGATAGGTCAATG+CGG + chr2.2:68607649-68607668 MS.gene01459:intron 40.0%
ATGATGATTCTGCTGCAGTT+GGG + chr2.2:68609873-68609892 MS.gene01459:CDS 40.0%
ATGTGAAAGAGGAGAACTTG+GGG + chr2.2:68608263-68608282 MS.gene01459:CDS 40.0%
CAAAATGGTGACATAGGTGT+GGG + chr2.2:68610046-68610065 MS.gene01459:CDS 40.0%
CAAGCCAGTTTACTTCAGAA+TGG - chr2.2:68610825-68610844 None:intergenic 40.0%
CACCAAGTCATCTAGTGATA+CGG + chr2.2:68608600-68608619 MS.gene01459:CDS 40.0%
CACTGAAAACCCGTTCTAAT+TGG + chr2.2:68609669-68609688 MS.gene01459:CDS 40.0%
CAGAAGGTTCCCAATTAGAA+CGG - chr2.2:68609682-68609701 None:intergenic 40.0%
CCATCTTTAATCTCAGCACT+GGG - chr2.2:68608950-68608969 None:intergenic 40.0%
CGAAACCAACATATGTACAG+AGG + chr2.2:68609503-68609522 MS.gene01459:CDS 40.0%
CTCAATACAGAGTCAAAACC+AGG - chr2.2:68607223-68607242 None:intergenic 40.0%
GAAAAGAGAAGTTTCCGATG+AGG + chr2.2:68609375-68609394 MS.gene01459:CDS 40.0%
GAATGGAACAAGAGAAAACG+CGG - chr2.2:68610808-68610827 None:intergenic 40.0%
GATGCAGATAAACGTAGCAA+AGG + chr2.2:68607101-68607120 MS.gene01459:CDS 40.0%
GATGTGAAAGAGGAGAACTT+GGG + chr2.2:68608262-68608281 MS.gene01459:CDS 40.0%
GATTAACTCCTCCTAATAGC+AGG + chr2.2:68608909-68608928 MS.gene01459:intron 40.0%
GCTGAAGATGGGAAAAATCA+AGG + chr2.2:68608469-68608488 MS.gene01459:CDS 40.0%
GGATGACCCTCTAATTAGAA+GGG - chr2.2:68609825-68609844 None:intergenic 40.0%
GGCTATCTGTTTCATAGTCA+AGG + chr2.2:68610728-68610747 MS.gene01459:intron 40.0%
TAGCAATCATTTCCTCTGCA+CGG - chr2.2:68609481-68609500 None:intergenic 40.0%
TAGTGATACGGGAAAAGATG+TGG + chr2.2:68608612-68608631 MS.gene01459:CDS 40.0%
TAGTGTGAATAATACCGACC+AGG + chr2.2:68609057-68609076 MS.gene01459:CDS 40.0%
TATCTTCAGTGGTCGGAATT+TGG - chr2.2:68610396-68610415 None:intergenic 40.0%
TATGATGATTCTGCTGCAGT+TGG + chr2.2:68609872-68609891 MS.gene01459:CDS 40.0%
TATGGAGCTTGATGTGAAAG+AGG + chr2.2:68608252-68608271 MS.gene01459:CDS 40.0%
TCACATCAAGCTCCATATGT+TGG - chr2.2:68608249-68608268 None:intergenic 40.0%
TCCATCTTTAATCTCAGCAC+TGG - chr2.2:68608951-68608970 None:intergenic 40.0%
TCCTGATGTTATCTCTGCTT+TGG - chr2.2:68610011-68610030 None:intergenic 40.0%
TCTCAATGCTATCACGAAGA+GGG - chr2.2:68609769-68609788 None:intergenic 40.0%
TGATGTGAAAGAGGAGAACT+TGG + chr2.2:68608261-68608280 MS.gene01459:CDS 40.0%
TGCACATCAGAAGAGAGAAT+TGG + chr2.2:68609102-68609121 MS.gene01459:CDS 40.0%
TTAGCAGTATCTTCAGTGGT+CGG - chr2.2:68610403-68610422 None:intergenic 40.0%
TTCTGCATGCTCATTTGCAA+AGG - chr2.2:68609317-68609336 None:intergenic 40.0%
TTGAACCCAAAGAGTCTAAG+AGG + chr2.2:68607460-68607479 MS.gene01459:intron 40.0%
TTGCTACGTTTATCTGCATC+GGG - chr2.2:68607101-68607120 None:intergenic 40.0%
TTGCTTAGCAGTATCTTCAG+TGG - chr2.2:68610407-68610426 None:intergenic 40.0%
TTTCAACCCCTGCTAGTATT+GGG + chr2.2:68610923-68610942 MS.gene01459:intron 40.0%
TTTCCCTGTAACAGGTGTTA+AGG + chr2.2:68609205-68609224 MS.gene01459:intron 40.0%
TTTGTTTGGTCAACCTCTTC+AGG + chr2.2:68609150-68609169 MS.gene01459:intron 40.0%
! CGGGAAGATTTTCATCTAGT+TGG + chr2.2:68609611-68609630 MS.gene01459:CDS 40.0%
! GGTTGAATTTTCCTGGTTCA+AGG - chr2.2:68607385-68607404 None:intergenic 40.0%
!! ATGCCTTTGGTGTTGAAGAT+AGG + chr2.2:68610074-68610093 MS.gene01459:CDS 40.0%
!! CAAAAAAGAGGTATTTGGGC+TGG - chr2.2:68610617-68610636 None:intergenic 40.0%
!! GAAGCTTTGCTATTGCAATC+TGG - chr2.2:68608559-68608578 None:intergenic 40.0%
!! GCTAAAACCATTTTGGCATG+AGG + chr2.2:68610294-68610313 MS.gene01459:CDS 40.0%
!! GTAAACTGGCTTGAATTGCA+TGG + chr2.2:68610832-68610851 MS.gene01459:intron 40.0%
!! TAAAGGCATTTCCCTGTAAC+AGG + chr2.2:68609197-68609216 MS.gene01459:intron 40.0%
!!! TTTTTTGTAACAGCCGTCTG+AGG + chr2.2:68610707-68610726 MS.gene01459:intron 40.0%
AACAGAAGTTCTGTTCCTCG+CGG + chr2.2:68609968-68609987 MS.gene01459:CDS 45.0%
AATGTGATGGCCGTACTTCA+GGG - chr2.2:68608312-68608331 None:intergenic 45.0%
AATTAGAGGGTCATCCGTTC+AGG + chr2.2:68609829-68609848 MS.gene01459:CDS 45.0%
ACCTTTAGGTGCAAGTGCTT+TGG + chr2.2:68609553-68609572 MS.gene01459:CDS 45.0%
ACGGGAAAAGATGTGGTTAC+TGG + chr2.2:68608619-68608638 MS.gene01459:CDS 45.0%
AGCAACTTGGAAAGACTGGT+AGG + chr2.2:68610947-68610966 MS.gene01459:intron 45.0%
AGCAATCATTTCCTCTGCAC+GGG - chr2.2:68609480-68609499 None:intergenic 45.0%
AGGGATTGGATTCCACTCAT+TGG - chr2.2:68607731-68607750 None:intergenic 45.0%
AGGGTCATAAAGATCTCTGG+GGG - chr2.2:68609750-68609769 None:intergenic 45.0%
AGGTTTCAACTCGTCAGAGT+TGG - chr2.2:68607684-68607703 None:intergenic 45.0%
ATGTGGTTGAGCTTCAATGC+AGG - chr2.2:68607564-68607583 None:intergenic 45.0%
CAAGATCAACAAGGACTGCA+TGG - chr2.2:68610264-68610283 None:intergenic 45.0%
CCAAAATGGTGACATAGGTG+TGG + chr2.2:68610045-68610064 MS.gene01459:CDS 45.0%
CGAGGAACAGAACTTCTGTT+TGG - chr2.2:68609968-68609987 None:intergenic 45.0%
CGGATGACCCTCTAATTAGA+AGG - chr2.2:68609826-68609845 None:intergenic 45.0%
CTTCAGAGGAAAACCACTGA+AGG + chr2.2:68608523-68608542 MS.gene01459:CDS 45.0%
CTTCTAGTCCTGCTATTAGG+AGG - chr2.2:68608920-68608939 None:intergenic 45.0%
CTTGTAGTGGCTCACAGAAA+GGG + chr2.2:68607404-68607423 MS.gene01459:intron 45.0%
CTTTCAACCCCTGCTAGTAT+TGG + chr2.2:68610922-68610941 MS.gene01459:intron 45.0%
GAGGGTCATAAAGATCTCTG+GGG - chr2.2:68609751-68609770 None:intergenic 45.0%
GATGGTCGAAATGGAACAGA+AGG - chr2.2:68609698-68609717 None:intergenic 45.0%
GCAAATGAGCATGCAGAATG+TGG + chr2.2:68609319-68609338 MS.gene01459:intron 45.0%
GCAACTTGGAAAGACTGGTA+GGG + chr2.2:68610948-68610967 MS.gene01459:intron 45.0%
GCAATCAGAGATGGAGTCAA+GGG + chr2.2:68608708-68608727 MS.gene01459:intron 45.0%
GGAAGCTACAAGAACTACCT+CGG - chr2.2:68609024-68609043 None:intergenic 45.0%
GGGTTTGAAGGGAAACCATA+TGG - chr2.2:68607262-68607281 None:intergenic 45.0%
GGTTTCAACTCGTCAGAGTT+GGG - chr2.2:68607683-68607702 None:intergenic 45.0%
GTGTGAATAATACCGACCAG+GGG + chr2.2:68609059-68609078 MS.gene01459:CDS 45.0%
TAATGTGATGGCCGTACTTC+AGG - chr2.2:68608313-68608332 None:intergenic 45.0%
TCCCGTATCACTAGATGACT+TGG - chr2.2:68608605-68608624 None:intergenic 45.0%
TGCAATCAGAGATGGAGTCA+AGG + chr2.2:68608707-68608726 MS.gene01459:intron 45.0%
TGGAAGAAGCAAGTCCAAGT+TGG + chr2.2:68609339-68609358 MS.gene01459:CDS 45.0%
TGTGAATAATACCGACCAGG+GGG + chr2.2:68609060-68609079 MS.gene01459:CDS 45.0%
TGTGGTTGAGCTTCAATGCA+GGG - chr2.2:68607563-68607582 None:intergenic 45.0%
TTCATGACAACTTCCGTCTG+AGG + chr2.2:68610663-68610682 MS.gene01459:intron 45.0%
TTCCCGATCTGAAGAGAAAG+AGG - chr2.2:68609597-68609616 None:intergenic 45.0%
TTGAATCCAGCTCCAATGAG+TGG + chr2.2:68607716-68607735 MS.gene01459:intron 45.0%
TTTGTTGAGGATGCTGATGG+TGG + chr2.2:68608661-68608680 MS.gene01459:CDS 45.0%
! CCACACCTATGTCACCATTT+TGG - chr2.2:68610048-68610067 None:intergenic 45.0%
! CCCAGTGCTGAGATTAAAGA+TGG + chr2.2:68608947-68608966 MS.gene01459:CDS 45.0%
! CGTATCACTAGATGACTTGG+TGG - chr2.2:68608602-68608621 None:intergenic 45.0%
! GAGGTTGACTTTCAGACAGA+TGG + chr2.2:68610202-68610221 MS.gene01459:CDS 45.0%
! TCCAAAGCACTTGCACCTAA+AGG - chr2.2:68609557-68609576 None:intergenic 45.0%
!! TAATTAATTAATTAATGAAT+TGG - chr2.2:68607131-68607150 None:intergenic 5.0%
AAGCCATCAAGGTCTGGTCA+TGG + chr2.2:68608745-68608764 MS.gene01459:intron 50.0%
AAGGGTTGAGTGGCAGCAAT+TGG - chr2.2:68607366-68607385 None:intergenic 50.0%
AGACGACCCTCATGCCAAAA+TGG - chr2.2:68610304-68610323 None:intergenic 50.0%
AGCATCTGTTCCGTTGCATG+AGG + chr2.2:68608366-68608385 MS.gene01459:CDS 50.0%
AGGGTTGCACCACATGCTAA+TGG + chr2.2:68609641-68609660 MS.gene01459:CDS 50.0%
AGTTGCTGCCCAATACTAGC+AGG - chr2.2:68610934-68610953 None:intergenic 50.0%
CACAAAGGGGATACCTGAAG+AGG - chr2.2:68609166-68609185 None:intergenic 50.0%
CCATGAGATGGATGCCAACT+TGG - chr2.2:68609356-68609375 None:intergenic 50.0%
CCTTGTAGTGGCTCACAGAA+AGG + chr2.2:68607403-68607422 MS.gene01459:intron 50.0%
CCTTTCTGTGAGCCACTACA+AGG - chr2.2:68607406-68607425 None:intergenic 50.0%
CTACCATGACCAGACCTTGA+TGG - chr2.2:68608751-68608770 None:intergenic 50.0%
CTCATATTCATCCCGTGCAG+AGG + chr2.2:68609466-68609485 MS.gene01459:CDS 50.0%
CTCTGCACGGGATGAATATG+AGG - chr2.2:68609468-68609487 None:intergenic 50.0%
GGAAACAAGCTGTCCCTCAT+CGG - chr2.2:68609392-68609411 None:intergenic 50.0%
GGCAGCCTCTTAGACTCTTT+GGG - chr2.2:68607468-68607487 None:intergenic 50.0%
GGTGTGGGACAATATGCCTT+TGG + chr2.2:68610061-68610080 MS.gene01459:CDS 50.0%
GTCGCAACAGTTGCACCATA+TGG + chr2.2:68607244-68607263 MS.gene01459:intron 50.0%
GTTGCTGCCCAATACTAGCA+GGG - chr2.2:68610933-68610952 None:intergenic 50.0%
TGGATTCCACTCATTGGAGC+TGG - chr2.2:68607725-68607744 None:intergenic 50.0%
TGGCAGCCTCTTAGACTCTT+TGG - chr2.2:68607469-68607488 None:intergenic 50.0%
TGGTTCACTGCATCCTTCAG+TGG - chr2.2:68608539-68608558 None:intergenic 50.0%
TTCCTGGTTCAAGGGTTGAG+TGG - chr2.2:68607376-68607395 None:intergenic 50.0%
TTGCTGCCCAATACTAGCAG+GGG - chr2.2:68610932-68610951 None:intergenic 50.0%
! CCAAGTTGGCATCCATCTCA+TGG + chr2.2:68609353-68609372 MS.gene01459:CDS 50.0%
! GCAAGACAATCTTTTCCGCG+AGG - chr2.2:68609986-68610005 None:intergenic 50.0%
! GCTAGTATTGGGCAGCAACT+TGG + chr2.2:68610934-68610953 MS.gene01459:intron 50.0%
! GCTGATCCAAAGGCATAACC+AGG - chr2.2:68607329-68607348 None:intergenic 50.0%
! TGTCACCGCATTGACCTATC+AGG - chr2.2:68607657-68607676 None:intergenic 50.0%
!! AACGGACTGAGCATGATGCT+AGG + chr2.2:68610113-68610132 MS.gene01459:CDS 50.0%
!! TGATGGTGGTCAGAACTCCA+AGG + chr2.2:68608675-68608694 MS.gene01459:CDS 50.0%
AATACCGACCAGGGGGATGA+AGG + chr2.2:68609067-68609086 MS.gene01459:CDS 55.0%
GGGCAGCAACTTGGAAAGAC+TGG + chr2.2:68610943-68610962 MS.gene01459:intron 55.0%
TCAGTGGTCGGAATTTGGCG+TGG - chr2.2:68610391-68610410 None:intergenic 55.0%
TCTGCATCGGGCAGAGAATC+TGG - chr2.2:68607089-68607108 None:intergenic 55.0%
TGCCACTCAACCCTTGAACC+AGG + chr2.2:68607371-68607390 MS.gene01459:intron 55.0%
TGCCCGAGAACCCTGAAGTA+CGG + chr2.2:68608299-68608318 MS.gene01459:CDS 55.0%
TGGCCGTACTTCAGGGTTCT+CGG - chr2.2:68608305-68608324 None:intergenic 55.0%
!! GCTAAAGGTTGGTGCATCCG+AGG + chr2.2:68609004-68609023 MS.gene01459:CDS 55.0%
CTACGTCTCCTTCATCCCCC+TGG - chr2.2:68609078-68609097 None:intergenic 60.0%
GCATGAGGGTCGTCTCAGCA+AGG + chr2.2:68610309-68610328 MS.gene01459:CDS 60.0%
GGCCGTACTTCAGGGTTCTC+GGG - chr2.2:68608304-68608323 None:intergenic 60.0%
GTCTCCTTCATCCCCCTGGT+CGG - chr2.2:68609074-68609093 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 68607023 68611071 68607023 ID=MS.gene01459
chr2.2 mRNA 68607023 68611071 68607023 ID=MS.gene01459.t1;Parent=MS.gene01459
chr2.2 exon 68607023 68607122 68607023 ID=MS.gene01459.t1.exon1;Parent=MS.gene01459.t1
chr2.2 CDS 68607023 68607122 68607023 ID=cds.MS.gene01459.t1;Parent=MS.gene01459.t1
chr2.2 exon 68608239 68608702 68608239 ID=MS.gene01459.t1.exon2;Parent=MS.gene01459.t1
chr2.2 CDS 68608239 68608702 68608239 ID=cds.MS.gene01459.t1;Parent=MS.gene01459.t1
chr2.2 exon 68608724 68608755 68608724 ID=MS.gene01459.t1.exon3;Parent=MS.gene01459.t1
chr2.2 CDS 68608724 68608755 68608724 ID=cds.MS.gene01459.t1;Parent=MS.gene01459.t1
chr2.2 exon 68608931 68609136 68608931 ID=MS.gene01459.t1.exon4;Parent=MS.gene01459.t1
chr2.2 CDS 68608931 68609136 68608931 ID=cds.MS.gene01459.t1;Parent=MS.gene01459.t1
chr2.2 exon 68609219 68609250 68609219 ID=MS.gene01459.t1.exon5;Parent=MS.gene01459.t1
chr2.2 CDS 68609219 68609250 68609219 ID=cds.MS.gene01459.t1;Parent=MS.gene01459.t1
chr2.2 exon 68609335 68610468 68609335 ID=MS.gene01459.t1.exon6;Parent=MS.gene01459.t1
chr2.2 CDS 68609335 68610468 68609335 ID=cds.MS.gene01459.t1;Parent=MS.gene01459.t1
chr2.2 exon 68611036 68611071 68611036 ID=MS.gene01459.t1.exon7;Parent=MS.gene01459.t1
chr2.2 CDS 68611036 68611071 68611036 ID=cds.MS.gene01459.t1;Parent=MS.gene01459.t1
Gene Sequence

>MS.gene01459

ATGGAAGTGGAGGAAGAACAAGAAACAGTTGTAGAGGAGAAAGATAAAGAGAAAAATGAGGTTCCAGATTCTCTGCCCGATGCAGATAAACGTAGCAAAGGTTTTCCAATTCATTAATTAATTAATTATTAGTTATGCTTTTTATTCTTGATTTGATCCTTTACTGGCACATTTATTTTCCTTAATAAATTTCGTGACCTGGTTTTGACTCTGTATTGAGAGTCGCAACAGTTGCACCATATGGTTTCCCTTCAAACCCCTTTATTGTTCATAGTATTGAATATTGATAGGTATTGAATATATCCTGGTTATGCCTTTGGATCAGCATGTGTAGTTTCTTCCAATTGCTGCCACTCAACCCTTGAACCAGGAAAATTCAACCTTGTAGTGGCTCACAGAAAGGGAATGTAACTCTTTTGCAGCTCTTATAGAAGGGATTGAACCCAAAGAGTCTAAGAGGCTGCCAATGCCAAACTTCTGTATCGTCTGACTCCATAGATGTATCTAGCATTCAACTTTGTAAAGGAGGTGGAACAACCCTGCATTGAAGCTCAACCACATAGTTCTCATAATAAATGAAATCATAGATCATAAGACACGTATAAGTTCATCGTTGCAAGTTTGAAATGAACCTGATAGGTCAATGCGGTGACAGAACCCAACTCTGACGAGTTGAAACCTAGCTTTATTCAGTTGAATCCAGCTCCAATGAGTGGAATCCAATCCCTCAATGTTTAGTAATTTTGACTGTTGTGATTGTCAATTGTTCATCTGTACTAAACTTGTCATACTCTTTTTACATGCTTAGTTGTGAACCTATCTTGTGCTTTATGATTTTTTCCATCATTTTTTAATTGTGATGTTGGTCTGGTCTGAATTTTATCACCGTGATTTACTTTATTACGAAGTTCGAATGTTGAATACTTGCTGCTGACATCATAAATCGTGTTTACATACTGTGATATGTGATGTGTTTTACACATCACTTTTTGTATTGAGTAAACTTGTAAACCCAAAAATTTATGAGTGAAGTCTATGGAGATTTTACGAGTTTACTTGGATTTTTGAGTTTGACAACTTTGTTTCTTTGAAACCAATATTTTTATAGTTTATCTTGTGAGAGGTAATCCACTTCCGTCTATTGTCTGTATGAAATGATTTAAAGAAGAGGATTCTTTTTCTAAATTCATAATTTATCTCTTATCTTCTATTGTAGATTCAAGCCAACATATGGAGCTTGATGTGAAAGAGGAGAACTTGGGGTCAGTTTCTTATGTGCCCGAGAACCCTGAAGTACGGCCATCACATTATATGGAAGAGAATGATACCATGAGCATGAGTAAAGCATCTGTTCCGTTGCATGAGGAATTGACATTGAAAAATGAAGATTATCCCCTGAAACAAAAAGTTTCTAGTCCTCCAAAACCAAGTGAAAACTTGATTTCTGCTGAAGATGGGAAAAATCAAGGCCTAAACGTTGATGTTGAAAATTCTGGACATCTTCAGAGGAAAACCACTGAAGGATGCAGTGAACCAGATTGCAATAGCAAAGCTTCTTTATCTGATGTTAAGGATGCCACCAAGTCATCTAGTGATACGGGAAAAGATGTGGTTACTGGAATCATACCGAGAGATAATTTTGTTGAGGATGCTGATGGTGGTCAGAACTCCAAGGAGAAAGTTATGCAATCAGAGATGGAGTCAAGGGTTGATGTGAAACAAAAGCCATCAAGGTCTGGTCATGGTAGTTCAGTATGTTCTTTTAAGTTTATTTACAAGATGACCAAAATTTAATTTACACTGCATGCTTTCTCTTTCAGAAGTAGCTTCTTGTCCTCTAACAACATAAATTAGTCCACACATAGTCTCTATCATTATGTTTTTCTGATTAACTCCTCCTAATAGCAGGACTAGAAGTCTGTCTCCCAGTGCTGAGATTAAAGATGGAAACAAAAGACCTGCAATTATATGTGCTTTTTTTGCTAAAGGTTGGTGCATCCGAGGTAGTTCTTGTAGCTTCCTTCATGTAAAAGATAGTGTGAATAATACCGACCAGGGGGATGAAGGAGACGTAGTTACTGCACATCAGAAGAGAGAATTGGAATTGGAAAAAGGTATATCAAATAATTTGTTTGGTCAACCTCTTCAGGTATCCCCTTTGTGCATATTTCTAATAAAGGCATTTCCCTGTAACAGGTGTTAAGGAAAATGTTGACAGGTCAAGAACGGTTAGTACTTCAGTTCCATTTACTGCTTTTCATAGAAGTATAACTTAACACTCTTCTGAATTTCCTTTGCAAATGAGCATGCAGAATGTGGAAGAAGCAAGTCCAAGTTGGCATCCATCTCATGGAAAAGAGAAGTTTCCGATGAGGGACAGCTTGTTTCCAGAGAATAAATCTGCATTTAATTCATCAAACAATTATTTCAGCTCAAATCTTTCCTCATATTCATCCCGTGCAGAGGAAATGATTGCTATTCGAAACCAACATATGTACAGAGGATATACATCGACAAAAGATTTTAGTTCACCTTTAGGTGCAAGTGCTTTGGACTCTCACGCCCATAAATCCTCTTTCTCTTCAGATCGGGAAGATTTTCATCTAGTTGGTTCATCTAGGGTTGCACCACATGCTAATGGATATACACTGAAAACCCGTTCTAATTGGGAACCTTCTGTTCCATTTCGACCATCCTTTTTTATCACTTCTATGAATGTATCATCCCCCAGAGATCTTTATGACCCTCTTCGTGATAGCATTGAGATACCAAATATTGGAGATGGGTCTCTGAAAGCTTCCCTTCTAATTAGAGGGTCATCCGTTCAGGCTTCATCACAAGTTCGAACATATGATGATTCTGCTGCAGTTGGGAAACACATGTCTGATGTTAATGATGATAAAAGTTCTGTATCTTCCCATCATAAGTTTTATGAAAATGAGCCAAACAGAAGTTCTGTTCCTCGCGGAAAAGATTGTCTTGCAACCAAAGCAGAGATAACATCAGGAAGTTGTGCAAACTACCAAAATGGTGACATAGGTGTGGGACAATATGCCTTTGGTGTTGAAGATAGGATAGAAACACTGAAAAAACGGACTGAGCATGATGCTAGGCATCATAGTGATGAATCAGAGCACAAAAAAAATAGAGTAGCAAAGGATAATAAATTTCATGAAATGGAGGTTGACTTTCAGACAGATGGCAGTGTACTCAAAGAAACAAAGATGCTGAAAATTTTCCATGCAGTCCTTGTTGATCTTGTGAAAGAGTTGCTAAAACCATTTTGGCATGAGGGTCGTCTCAGCAAGGATGCACATATATTGATAGTTAAAAAATCAGTTGACAAGGTTATTAGCACTTTAGAGCCACGCCAAATTCCGACCACTGAAGATACTGCTAAGCAATATGTTTCTTTATGTCGGCCAAAAATTGCAAAGTTAGTCCATGTAAGTGTCCTTTTTTTGCACAGTTTTTGTTATTTGTCAATGGAAGTACATGGACTTTCTTGTTTGTCCTCCGTTTGATTTGACAGAATAGATATATATTTTTGTGTGCAGGGATATGTCAATAAACATGGCAAATCTTGATATGCCAGCCCAAATACCTCTTTTTTGTACAGTTTCTGTTTGGCTGATTCCAATTCATGACAACTTCCGTCTGAGGCTATCTTTTTTTTTTTTTTTTTTTTTTGTAACAGCCGTCTGAGGCTATCTGTTTCATAGTCAAGGTTGATTTGGAATATTTTGAATTCTCTTTCAAGATGTCTGCTTCATTTTTTTTTTCCGCGTTTTCTCTTGTTCCATTCTGAAGTAAACTGGCTTGAATTGCATGGTTTATAAGGATATCTTATTTCATTAATTTGCATAATTATGTTACTTGTTTAGCAATATTTGGTGTAACTTTCAACCCCTGCTAGTATTGGGCAGCAACTTGGAAAGACTGGTAGGGCTCATGTTGTTCTTTAGTTTCATGCATATGAAAAATCTGGATATTTTTTTTTTTTTTTTGTAAAGACGGTGGTGGACCGTGCTGTAGAGTTTAGCAATTAG
Protein sequence

>MS.gene01459.t1

MEVEEEQETVVEEKDKEKNEVPDSLPDADKRSKDSSQHMELDVKEENLGSVSYVPENPEVRPSHYMEENDTMSMSKASVPLHEELTLKNEDYPLKQKVSSPPKPSENLISAEDGKNQGLNVDVENSGHLQRKTTEGCSEPDCNSKASLSDVKDATKSSSDTGKDVVTGIIPRDNFVEDADGGQNSKEKSRVDVKQKPSRTRSLSPSAEIKDGNKRPAIICAFFAKGWCIRGSSCSFLHVKDSVNNTDQGDEGDVVTAHQKRELELEKGVKENVDRSRTNVEEASPSWHPSHGKEKFPMRDSLFPENKSAFNSSNNYFSSNLSSYSSRAEEMIAIRNQHMYRGYTSTKDFSSPLGASALDSHAHKSSFSSDREDFHLVGSSRVAPHANGYTLKTRSNWEPSVPFRPSFFITSMNVSSPRDLYDPLRDSIEIPNIGDGSLKASLLIRGSSVQASSQVRTYDDSAAVGKHMSDVNDDKSSVSSHHKFYENEPNRSSVPRGKDCLATKAEITSGSCANYQNGDIGVGQYAFGVEDRIETLKKRTEHDARHHSDESEHKKNRVAKDNKFHEMEVDFQTDGSVLKETKMLKIFHAVLVDLVKELLKPFWHEGRLSKDAHILIVKKSVDKVISTLEPRQIPTTEDTAKQYVSLCRPKIAKLVHTVVDRAVEFSN