Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene014645.t1 | XP_013462017.1 | 91.5 | 434 | 25 | 2 | 1 | 426 | 1 | 430 | 7.70E-224 | 786.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene014645.t1 | Q93Z18 | 58.2 | 428 | 150 | 6 | 1 | 416 | 1 | 411 | 1.7e-131 | 470.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene014645.t1 | A0A072V2G9 | 91.5 | 434 | 25 | 2 | 1 | 426 | 1 | 430 | 5.6e-224 | 786.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene014645.t1 | MTR_3g110180 | 95.853 | 434 | 6 | 2 | 1 | 426 | 1 | 430 | 0.0 | 858 |
MS.gene014645.t1 | MTR_3g110180 | 95.622 | 434 | 6 | 3 | 1 | 426 | 1 | 429 | 0.0 | 825 |
MS.gene014645.t1 | MTR_1g004990 | 60.417 | 432 | 152 | 3 | 1 | 424 | 1 | 421 | 0.0 | 523 |
MS.gene014645.t1 | MTR_6g087070 | 62.044 | 411 | 132 | 6 | 1 | 400 | 1 | 398 | 0.0 | 513 |
MS.gene014645.t1 | MTR_8g102930 | 59.039 | 437 | 155 | 6 | 1 | 426 | 1 | 424 | 5.83e-177 | 501 |
MS.gene014645.t1 | MTR_4g126010 | 64.162 | 346 | 109 | 3 | 1 | 337 | 1 | 340 | 1.68e-163 | 468 |
MS.gene014645.t1 | MTR_2g099670 | 65.205 | 342 | 108 | 3 | 1 | 331 | 1 | 342 | 2.54e-163 | 468 |
MS.gene014645.t1 | MTR_1g069720 | 66.352 | 318 | 99 | 1 | 1 | 310 | 1 | 318 | 4.24e-160 | 459 |
MS.gene014645.t1 | MTR_1g042280 | 67.752 | 307 | 91 | 1 | 1 | 299 | 2 | 308 | 1.71e-157 | 452 |
MS.gene014645.t1 | MTR_7g097160 | 65.312 | 320 | 103 | 1 | 1 | 312 | 1 | 320 | 6.66e-157 | 451 |
MS.gene014645.t1 | MTR_2g039930 | 58.933 | 375 | 129 | 6 | 1 | 356 | 1 | 369 | 1.52e-156 | 451 |
MS.gene014645.t1 | MTR_8g018310 | 64.179 | 335 | 103 | 4 | 1 | 327 | 1 | 326 | 2.33e-156 | 450 |
MS.gene014645.t1 | MTR_8g018310 | 64.179 | 335 | 103 | 4 | 1 | 327 | 1 | 326 | 1.75e-155 | 446 |
MS.gene014645.t1 | MTR_1g075870 | 65.015 | 323 | 97 | 2 | 1 | 315 | 2 | 316 | 2.20e-155 | 442 |
MS.gene014645.t1 | MTR_1g075870 | 65.015 | 323 | 97 | 2 | 1 | 315 | 2 | 316 | 2.29e-154 | 445 |
MS.gene014645.t1 | MTR_1g042280 | 70.149 | 268 | 80 | 0 | 32 | 299 | 9 | 276 | 9.31e-145 | 414 |
MS.gene014645.t1 | MTR_0492s0030 | 65.000 | 300 | 95 | 2 | 1 | 290 | 1 | 300 | 1.96e-140 | 406 |
MS.gene014645.t1 | MTR_0543s0020 | 65.000 | 300 | 95 | 2 | 1 | 290 | 1 | 300 | 1.96e-140 | 406 |
MS.gene014645.t1 | MTR_2g099670 | 68.214 | 280 | 86 | 2 | 55 | 331 | 11 | 290 | 3.93e-140 | 407 |
MS.gene014645.t1 | MTR_1g075870 | 68.045 | 266 | 77 | 1 | 50 | 315 | 2 | 259 | 4.18e-134 | 387 |
MS.gene014645.t1 | MTR_2g039930 | 60.204 | 294 | 100 | 5 | 74 | 356 | 1 | 288 | 1.11e-122 | 362 |
MS.gene014645.t1 | MTR_7g097160 | 68.927 | 177 | 55 | 0 | 136 | 312 | 25 | 201 | 2.61e-85 | 264 |
MS.gene014645.t1 | MTR_3g110240 | 37.121 | 264 | 155 | 5 | 7 | 265 | 133 | 390 | 7.91e-51 | 182 |
MS.gene014645.t1 | MTR_1g007150 | 36.364 | 264 | 157 | 5 | 7 | 265 | 136 | 393 | 7.45e-50 | 179 |
MS.gene014645.t1 | MTR_7g006030 | 35.206 | 267 | 162 | 5 | 7 | 265 | 49 | 312 | 8.55e-50 | 178 |
MS.gene014645.t1 | MTR_7g085540 | 36.296 | 270 | 162 | 5 | 7 | 269 | 159 | 425 | 2.59e-49 | 178 |
MS.gene014645.t1 | MTR_1g116210 | 34.286 | 280 | 162 | 6 | 5 | 265 | 113 | 389 | 2.94e-47 | 172 |
MS.gene014645.t1 | MTR_8g014050 | 34.444 | 270 | 161 | 7 | 7 | 265 | 140 | 404 | 1.47e-42 | 159 |
MS.gene014645.t1 | MTR_7g116400 | 52.308 | 65 | 30 | 1 | 74 | 137 | 3 | 67 | 7.64e-16 | 72.8 |
MS.gene014645.t1 | MTR_7g118020 | 26.728 | 217 | 133 | 5 | 6 | 205 | 141 | 348 | 7.21e-12 | 67.8 |
MS.gene014645.t1 | MTR_4g086660 | 29.448 | 163 | 105 | 3 | 44 | 205 | 188 | 341 | 7.91e-12 | 67.4 |
MS.gene014645.t1 | MTR_7g073520 | 32.800 | 125 | 71 | 3 | 99 | 221 | 250 | 363 | 8.38e-12 | 67.4 |
MS.gene014645.t1 | MTR_8g079790 | 28.221 | 163 | 107 | 3 | 44 | 205 | 179 | 332 | 1.48e-11 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene014645.t1 | AT4G28880 | 59.346 | 428 | 145 | 6 | 1 | 416 | 1 | 411 | 5.05e-178 | 503 |
MS.gene014645.t1 | AT4G28880 | 59.346 | 428 | 145 | 6 | 1 | 416 | 1 | 411 | 5.05e-178 | 503 |
MS.gene014645.t1 | AT4G28880 | 59.346 | 428 | 145 | 6 | 1 | 416 | 1 | 411 | 5.05e-178 | 503 |
MS.gene014645.t1 | AT4G28880 | 59.346 | 428 | 145 | 6 | 1 | 416 | 1 | 411 | 5.05e-178 | 503 |
MS.gene014645.t1 | AT4G28860 | 59.569 | 418 | 144 | 5 | 1 | 409 | 1 | 402 | 2.60e-176 | 499 |
MS.gene014645.t1 | AT4G28860 | 71.384 | 318 | 83 | 1 | 1 | 310 | 1 | 318 | 7.65e-175 | 494 |
MS.gene014645.t1 | AT4G26100 | 55.422 | 415 | 143 | 9 | 1 | 399 | 1 | 389 | 2.67e-159 | 457 |
MS.gene014645.t1 | AT5G57015 | 64.308 | 325 | 106 | 2 | 1 | 315 | 1 | 325 | 1.34e-156 | 449 |
MS.gene014645.t1 | AT1G72710 | 64.329 | 328 | 107 | 3 | 1 | 319 | 1 | 327 | 1.42e-156 | 451 |
MS.gene014645.t1 | AT5G44100 | 69.360 | 297 | 83 | 1 | 1 | 289 | 1 | 297 | 1.84e-155 | 448 |
MS.gene014645.t1 | AT5G44100 | 69.360 | 297 | 83 | 1 | 1 | 289 | 1 | 297 | 1.84e-155 | 448 |
MS.gene014645.t1 | AT1G03930 | 67.340 | 297 | 89 | 1 | 1 | 289 | 1 | 297 | 1.97e-154 | 445 |
MS.gene014645.t1 | AT4G28540 | 68.121 | 298 | 87 | 1 | 1 | 290 | 5 | 302 | 4.38e-154 | 445 |
MS.gene014645.t1 | AT3G23340 | 64.688 | 320 | 104 | 2 | 1 | 312 | 1 | 319 | 5.93e-154 | 443 |
MS.gene014645.t1 | AT2G19470 | 62.614 | 329 | 108 | 2 | 1 | 321 | 1 | 322 | 2.17e-153 | 441 |
MS.gene014645.t1 | AT4G14340 | 64.062 | 320 | 106 | 2 | 1 | 312 | 7 | 325 | 6.82e-152 | 438 |
MS.gene014645.t1 | AT4G14340 | 62.090 | 335 | 111 | 2 | 1 | 327 | 7 | 333 | 9.54e-152 | 434 |
MS.gene014645.t1 | AT5G43320 | 68.013 | 297 | 87 | 1 | 1 | 289 | 1 | 297 | 2.26e-150 | 435 |
MS.gene014645.t1 | AT3G23340 | 64.423 | 312 | 104 | 2 | 1 | 312 | 1 | 305 | 8.44e-150 | 432 |
MS.gene014645.t1 | AT5G43320 | 61.383 | 347 | 122 | 3 | 1 | 339 | 1 | 343 | 1.44e-149 | 429 |
MS.gene014645.t1 | AT5G43320 | 61.383 | 347 | 122 | 3 | 1 | 339 | 1 | 343 | 1.44e-149 | 429 |
MS.gene014645.t1 | AT1G04440 | 67.340 | 297 | 89 | 1 | 1 | 289 | 1 | 297 | 2.20e-148 | 430 |
MS.gene014645.t1 | AT4G08800 | 58.163 | 294 | 83 | 3 | 1 | 286 | 1 | 262 | 9.53e-121 | 353 |
MS.gene014645.t1 | AT3G13670 | 35.424 | 271 | 164 | 5 | 7 | 269 | 149 | 416 | 1.51e-50 | 182 |
MS.gene014645.t1 | AT2G25760 | 36.194 | 268 | 162 | 4 | 7 | 265 | 119 | 386 | 2.27e-50 | 181 |
MS.gene014645.t1 | AT3G03940 | 36.296 | 270 | 162 | 5 | 7 | 269 | 152 | 418 | 2.44e-50 | 181 |
MS.gene014645.t1 | AT2G25760 | 36.567 | 268 | 158 | 5 | 7 | 265 | 119 | 383 | 7.72e-50 | 179 |
MS.gene014645.t1 | AT5G18190 | 35.662 | 272 | 165 | 5 | 7 | 271 | 142 | 410 | 3.00e-49 | 178 |
MS.gene014645.t1 | AT5G18190 | 35.662 | 272 | 165 | 5 | 7 | 271 | 142 | 410 | 3.00e-49 | 178 |
MS.gene014645.t1 | AT3G50530 | 30.061 | 163 | 104 | 3 | 44 | 205 | 199 | 352 | 2.48e-13 | 72.4 |
MS.gene014645.t1 | AT3G49370 | 28.440 | 218 | 130 | 6 | 7 | 207 | 140 | 348 | 1.04e-11 | 67.4 |
MS.gene014645.t1 | AT3G50530 | 28.495 | 186 | 108 | 6 | 44 | 205 | 199 | 383 | 3.84e-11 | 65.5 |
MS.gene014645.t1 | AT5G24430 | 27.854 | 219 | 130 | 6 | 7 | 207 | 141 | 349 | 3.97e-11 | 65.5 |
MS.gene014645.t1 | AT2G46700 | 29.082 | 196 | 118 | 5 | 11 | 205 | 172 | 347 | 9.51e-11 | 64.3 |
Find 98 sgRNAs with CRISPR-Local
Find 307 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAAGTTCCTGTGGGCCTTTC+AGG | 0.062348 | 3.1:-87892012 | None:intergenic |
TCAAACCTAGGTCGTGTATT+TGG | 0.098979 | 3.1:+87892033 | MS.gene014645:CDS |
AGGAATATGCTTGCTTGTTT+TGG | 0.195324 | 3.1:-87888750 | None:intergenic |
TATTCTGGTTATGGATCTTC+TGG | 0.212846 | 3.1:+87888160 | MS.gene014645:CDS |
TTTGATCAAGATCCAGATTA+TGG | 0.217415 | 3.1:+87890282 | MS.gene014645:CDS |
TTGGAGAAGACTGTATAATT+TGG | 0.243957 | 3.1:-87887987 | None:intergenic |
GAATCCAGCTGCTTGAAATA+TGG | 0.275973 | 3.1:-87892065 | None:intergenic |
CAAGCAAGCATATTCCTTAT+AGG | 0.278492 | 3.1:+87888756 | MS.gene014645:CDS |
ATAACTTCCTAATGGGTATT+AGG | 0.293154 | 3.1:+87888555 | MS.gene014645:CDS |
GCAGCTGGATTCCTTCTTTA+CGG | 0.295950 | 3.1:+87892076 | MS.gene014645:CDS |
AGAGAGAATAAAAGTTTAAC+AGG | 0.303019 | 3.1:+87889546 | MS.gene014645:intron |
CAAACCTAGGTCGTGTATTT+GGG | 0.321394 | 3.1:+87892034 | MS.gene014645:CDS |
GCAAAGTCGCCGTGATGATT+TGG | 0.329153 | 3.1:+87889692 | MS.gene014645:CDS |
ATACCCATTAGGAAGTTATC+TGG | 0.331317 | 3.1:-87888551 | None:intergenic |
TAGGTTTATATTATTGATTT+CGG | 0.339874 | 3.1:+87888704 | MS.gene014645:intron |
TGATGGAGATCATAATATTC+TGG | 0.354764 | 3.1:+87888145 | MS.gene014645:CDS |
GGATCTTCTGGGACGTAGTC+TGG | 0.355238 | 3.1:+87888172 | MS.gene014645:CDS |
AGCATTTAGATTCTTTAGAT+TGG | 0.357090 | 3.1:-87891705 | None:intergenic |
CAAACCAGATAACTTCCTAA+TGG | 0.358154 | 3.1:+87888547 | MS.gene014645:CDS |
CGCTTTAAGAATCCATAATC+TGG | 0.362175 | 3.1:-87890294 | None:intergenic |
GTCCTTATGTACTTCTTAAG+AGG | 0.366081 | 3.1:+87889729 | MS.gene014645:CDS |
AACAACAAAATATACCTATA+AGG | 0.367234 | 3.1:-87888770 | None:intergenic |
CGTGATGATTTGGAGTCTAT+TGG | 0.367974 | 3.1:+87889702 | MS.gene014645:CDS |
AGATCATAATATTCTGGTTA+TGG | 0.373211 | 3.1:+87888151 | MS.gene014645:CDS |
TGAGGTCGTTGCCGTCAAAA+TGG | 0.379560 | 3.1:+87887466 | MS.gene014645:CDS |
TTTAAGATTGGTCGCAAAAT+CGG | 0.381240 | 3.1:+87887302 | MS.gene014645:CDS |
TATATTATTGATTTCGGACT+AGG | 0.399991 | 3.1:+87888710 | MS.gene014645:CDS |
CACATTTGGACGATCAAGAT+TGG | 0.402023 | 3.1:-87891663 | None:intergenic |
TTAGGCTGCACACGCACATT+TGG | 0.429031 | 3.1:-87891677 | None:intergenic |
AAACCAGATAACTTCCTAAT+GGG | 0.430261 | 3.1:+87888548 | MS.gene014645:CDS |
TTTATAACTTACTTTCTCCT+TGG | 0.432685 | 3.1:-87888006 | None:intergenic |
AATCCAGCTGCTTGAAATAT+GGG | 0.440658 | 3.1:-87892064 | None:intergenic |
ACTCCCATATTTCAAGCAGC+TGG | 0.449190 | 3.1:+87892061 | MS.gene014645:CDS |
TGCTCCCGCAGAAGACAAAA+AGG | 0.451965 | 3.1:-87888199 | None:intergenic |
TTTAGATTCTTTAGATTGGA+TGG | 0.456240 | 3.1:-87891701 | None:intergenic |
GTTGGCGGAAAGTTTAAGAT+TGG | 0.473575 | 3.1:+87887290 | MS.gene014645:CDS |
ATTCTGGTTATGGATCTTCT+GGG | 0.476383 | 3.1:+87888161 | MS.gene014645:CDS |
ACTATGACAATTTATTCGAC+TGG | 0.479555 | 3.1:+87890894 | MS.gene014645:CDS |
TGCAATACTCACTTAGGAAT+CGG | 0.487644 | 3.1:+87889588 | MS.gene014645:CDS |
TTCTTTAGATTGGATGGCTT+AGG | 0.488699 | 3.1:-87891695 | None:intergenic |
TTCCTCTTAAGAAGTACATA+AGG | 0.490195 | 3.1:-87889731 | None:intergenic |
GAAGAAATTCGCCGTAAAGA+AGG | 0.496549 | 3.1:-87892087 | None:intergenic |
CAGTCTACAACCAGTGGTTG+TGG | 0.500770 | 3.1:+87891157 | MS.gene014645:CDS |
GTACCGCACCATCTCATAGT+TGG | 0.509024 | 3.1:-87888122 | None:intergenic |
TCTAAATGCTAAGAATCATA+CGG | 0.510015 | 3.1:+87891718 | MS.gene014645:CDS |
CGTGAGTTGTTCACTCGTGA+AGG | 0.516158 | 3.1:+87890324 | MS.gene014645:CDS |
AATAGAGTACATGCATTCCA+AGG | 0.528223 | 3.1:+87888505 | MS.gene014645:CDS |
GCATCCACAACTATTGTATG+AGG | 0.532224 | 3.1:+87887964 | MS.gene014645:CDS |
GCAAGTTGCAATACTCACTT+AGG | 0.533425 | 3.1:+87889582 | MS.gene014645:CDS |
AACATGGAGTGGGTCGTTGG+CGG | 0.534619 | 3.1:+87887275 | None:intergenic |
ACCTAGGTTTGAAGTTCCTG+TGG | 0.540684 | 3.1:-87892022 | None:intergenic |
TATTAGGAGAAAATCAAGTC+AGG | 0.540941 | 3.1:+87888571 | MS.gene014645:CDS |
TTGGCCTCATACAATAGTTG+TGG | 0.548570 | 3.1:-87887968 | None:intergenic |
CAATGATCCGTCCACTTCAT+CGG | 0.549710 | 3.1:+87891954 | MS.gene014645:CDS |
TTATGTACTTCTTAAGAGGA+AGG | 0.553282 | 3.1:+87889733 | MS.gene014645:CDS |
CTTTCAGACCCTGCCAAGGA+AGG | 0.558293 | 3.1:-87889882 | None:intergenic |
ATGAGATGGTGCGGTACTGA+TGG | 0.560221 | 3.1:+87888128 | MS.gene014645:CDS |
AACAACATGGAGTGGGTCGT+TGG | 0.562685 | 3.1:+87887272 | None:intergenic |
TTTGATGTTAGCAGACCAGA+TGG | 0.566646 | 3.1:+87888241 | MS.gene014645:CDS |
TGTAGGAGAAGAAGAGAACA+AGG | 0.572961 | 3.1:+87887942 | MS.gene014645:intron |
CTAAATGCTAAGAATCATAC+GGG | 0.574445 | 3.1:+87891719 | MS.gene014645:CDS |
GAATAAAAGTTTAACAGGGA+CGG | 0.577039 | 3.1:+87889551 | MS.gene014645:CDS |
TTTGGGCAAAGCCGATGAAG+TGG | 0.584387 | 3.1:-87891965 | None:intergenic |
TCTAAGCCTGAAAGGCCCAC+AGG | 0.585651 | 3.1:+87892006 | MS.gene014645:CDS |
GCACTAGGTACGGCATCTGA+AGG | 0.595661 | 3.1:-87891113 | None:intergenic |
TATTCCCAAATACACGACCT+AGG | 0.597805 | 3.1:-87892038 | None:intergenic |
AAAGTAAGACGCAAACTCCA+CGG | 0.599632 | 3.1:-87890238 | None:intergenic |
CATCCGCTAACAACATGGAG+TGG | 0.601509 | 3.1:+87887264 | None:intergenic |
AAGTAAGACGCAAACTCCAC+GGG | 0.604948 | 3.1:-87890237 | None:intergenic |
CCTAGGTTTGAAGTTCCTGT+GGG | 0.606084 | 3.1:-87892021 | None:intergenic |
ACTAGGAACAGCACTAGGTA+CGG | 0.607129 | 3.1:-87891123 | None:intergenic |
ACCACTGGTTGTAGACTGCT+AGG | 0.607910 | 3.1:-87891152 | None:intergenic |
ATCAGCAGACGCAACAGACA+AGG | 0.613053 | 3.1:+87890930 | MS.gene014645:CDS |
ATCCGCTAACAACATGGAGT+GGG | 0.614583 | 3.1:+87887265 | None:intergenic |
TGGATCTTGATCAAATGTCA+AGG | 0.615184 | 3.1:-87890274 | None:intergenic |
GTGGTATTCCAACTATGAGA+TGG | 0.615515 | 3.1:+87888114 | MS.gene014645:CDS |
AGACTGCTAGGCACAGCACT+AGG | 0.616647 | 3.1:-87891140 | None:intergenic |
AAGGAGACAAAAGCAATCAT+CGG | 0.624317 | 3.1:+87890949 | MS.gene014645:CDS |
ATTGGTCGCAAAATCGGAAG+CGG | 0.626522 | 3.1:+87887308 | MS.gene014645:CDS |
CTCAGAGGTGTCCATATCAG+AGG | 0.626948 | 3.1:-87887447 | None:intergenic |
GGCAAAGCCGATGAAGTGGA+CGG | 0.627991 | 3.1:-87891961 | None:intergenic |
AAAATGTCTCTAAGCCTGAA+AGG | 0.629959 | 3.1:+87891998 | MS.gene014645:CDS |
CCCACAGGAACTTCAAACCT+AGG | 0.637853 | 3.1:+87892021 | MS.gene014645:CDS |
AAATTATACAGTCTTCTCCA+AGG | 0.638640 | 3.1:+87887989 | MS.gene014645:CDS |
GCCTAGCAGTCTACAACCAG+TGG | 0.640292 | 3.1:+87891151 | MS.gene014645:CDS |
ACAGCTTTCAGACCCTGCCA+AGG | 0.644712 | 3.1:-87889886 | None:intergenic |
ATTGAAAATGTATACCTCAG+TGG | 0.646544 | 3.1:-87889959 | None:intergenic |
TCTTCTGGGACGTAGTCTGG+AGG | 0.649427 | 3.1:+87888175 | MS.gene014645:CDS |
TCTGAAAGCTGTCACCAAAG+AGG | 0.650261 | 3.1:+87889897 | MS.gene014645:CDS |
ACAGCACTAGGAACAGCACT+AGG | 0.656993 | 3.1:-87891128 | None:intergenic |
ATAGAGTACATGCATTCCAA+GGG | 0.660373 | 3.1:+87888506 | MS.gene014645:CDS |
GCTTTGCGAATCATATCCCG+TGG | 0.663642 | 3.1:+87890221 | MS.gene014645:CDS |
CTCTGATATGGACACCTCTG+AGG | 0.669495 | 3.1:+87887448 | MS.gene014645:CDS |
CAATAGACTCCAAATCATCA+CGG | 0.670210 | 3.1:-87889701 | None:intergenic |
ATTCCAACTATGAGATGGTG+CGG | 0.673968 | 3.1:+87888119 | MS.gene014645:CDS |
GAGAGAATAAAAGTTTAACA+GGG | 0.702224 | 3.1:+87889547 | MS.gene014645:intron |
TTTGACGGCAACGACCTCAG+AGG | 0.711927 | 3.1:-87887462 | None:intergenic |
GAAGTTATCAACTTCCACTG+AGG | 0.761442 | 3.1:+87889945 | MS.gene014645:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | GAAAAATAATAATAATAACA+AGG | - | chr3.1:87891464-87891483 | None:intergenic | 10.0% |
!!! | ACATTTTGAATTTTAAAAAA+TGG | + | chr3.1:87889787-87889806 | MS.gene014645:intron | 10.0% |
!!! | ATATTTCTAATCTTTTATTA+TGG | + | chr3.1:87888804-87888823 | MS.gene014645:intron | 10.0% |
!!! | TATTATTATTATTTTTCACT+TGG | + | chr3.1:87891467-87891486 | MS.gene014645:intron | 10.0% |
!! | AAAAAAATGTCTAAATTTGA+TGG | + | chr3.1:87889159-87889178 | MS.gene014645:intron | 15.0% |
!! | AAATAAACTTCTTATTACAT+CGG | - | chr3.1:87890849-87890868 | None:intergenic | 15.0% |
!! | TGATATTAATTATTCTTCAT+TGG | + | chr3.1:87888993-87889012 | MS.gene014645:intron | 15.0% |
!!! | ATTCTTTTTAGGTAAATTTA+GGG | + | chr3.1:87889832-87889851 | MS.gene014645:intron | 15.0% |
!!! | TAAACAAATCAAGTATTTTT+AGG | - | chr3.1:87888865-87888884 | None:intergenic | 15.0% |
!!! | TAGGTTTATATTATTGATTT+CGG | + | chr3.1:87888704-87888723 | MS.gene014645:intron | 15.0% |
!!! | TTGTTTTGATTTTTTTTACT+TGG | + | chr3.1:87891886-87891905 | MS.gene014645:intron | 15.0% |
!! | AAAATTAAGAAGAAATCCAA+TGG | - | chr3.1:87891779-87891798 | None:intergenic | 20.0% |
!! | AACAACAAAATATACCTATA+AGG | - | chr3.1:87888773-87888792 | None:intergenic | 20.0% |
!! | AATAAACTTCTTATTACATC+GGG | - | chr3.1:87890848-87890867 | None:intergenic | 20.0% |
!! | AATAATAACAAGGAATTTGT+TGG | - | chr3.1:87891454-87891473 | None:intergenic | 20.0% |
!! | AATCAGGAAAGTTTAATAAT+CGG | - | chr3.1:87891055-87891074 | None:intergenic | 20.0% |
!! | ATCATAAAATGTTAGATAGT+TGG | - | chr3.1:87890638-87890657 | None:intergenic | 20.0% |
!! | CAAAATAGAATGAAATTTGT+GGG | - | chr3.1:87889656-87889675 | None:intergenic | 20.0% |
!! | GAAATTAAAAACTAGATTGA+GGG | - | chr3.1:87890008-87890027 | None:intergenic | 20.0% |
!! | GATGTAATAAGAAGTTTATT+TGG | + | chr3.1:87890848-87890867 | MS.gene014645:intron | 20.0% |
!! | GTAAGAAAATTACAATGAAT+GGG | - | chr3.1:87889769-87889788 | None:intergenic | 20.0% |
!! | TAGACCATAAAAATGTTTAA+AGG | - | chr3.1:87890993-87891012 | None:intergenic | 20.0% |
!! | TGTAAGAAAATTACAATGAA+TGG | - | chr3.1:87889770-87889789 | None:intergenic | 20.0% |
!! | TTTAAGTAATTACTGTCAAT+TGG | + | chr3.1:87890377-87890396 | MS.gene014645:intron | 20.0% |
!!! | AACAATATTAAGAGCTTTTA+AGG | + | chr3.1:87890083-87890102 | MS.gene014645:intron | 20.0% |
!!! | AACATTAAAGTATTAACGTA+AGG | - | chr3.1:87889236-87889255 | None:intergenic | 20.0% |
!!! | AAGTTATAAAAGAAGCATTT+GGG | + | chr3.1:87888019-87888038 | MS.gene014645:intron | 20.0% |
!!! | AATTTTTGGATATAGAGTAA+TGG | - | chr3.1:87890676-87890695 | None:intergenic | 20.0% |
!!! | ACATTAAAGTATTAACGTAA+GGG | - | chr3.1:87889235-87889254 | None:intergenic | 20.0% |
!!! | ATATCCAAAAATTCATGTTT+TGG | + | chr3.1:87890683-87890702 | MS.gene014645:intron | 20.0% |
!!! | ATGATAATTTGCTTATTAGT+TGG | + | chr3.1:87890431-87890450 | MS.gene014645:intron | 20.0% |
!!! | ATGATATTAAATATGGCTTT+TGG | + | chr3.1:87888326-87888345 | MS.gene014645:intron | 20.0% |
!!! | ATTTCCAAAACATGAATTTT+TGG | - | chr3.1:87890690-87890709 | None:intergenic | 20.0% |
!!! | CATTCTTTTTAGGTAAATTT+AGG | + | chr3.1:87889831-87889850 | MS.gene014645:intron | 20.0% |
!!! | TAAGTTATAAAAGAAGCATT+TGG | + | chr3.1:87888018-87888037 | MS.gene014645:intron | 20.0% |
!!! | TAGGTATTTTTTGCTTATAA+TGG | + | chr3.1:87889286-87889305 | MS.gene014645:intron | 20.0% |
!!! | TCATGTTTTTACATGTTATA+AGG | + | chr3.1:87888828-87888847 | MS.gene014645:intron | 20.0% |
!!! | TCATTTGGTGAAATTTATAT+AGG | + | chr3.1:87887332-87887351 | MS.gene014645:intron | 20.0% |
!!! | TGAAAGTGTGTAAAAAATAA+AGG | - | chr3.1:87887852-87887871 | None:intergenic | 20.0% |
!!! | TGAACCTTTAAACATTTTTA+TGG | + | chr3.1:87890986-87891005 | MS.gene014645:intron | 20.0% |
!!! | TTCCTTGATGATATTAAATA+TGG | + | chr3.1:87888319-87888338 | MS.gene014645:intron | 20.0% |
! | AAAACTGCTACTATATTGAT+AGG | - | chr3.1:87888373-87888392 | None:intergenic | 25.0% |
! | AAGAAAGGTTAAATACTTAG+TGG | - | chr3.1:87890499-87890518 | None:intergenic | 25.0% |
! | AAGACATATGAAACGAATTA+TGG | - | chr3.1:87888654-87888673 | None:intergenic | 25.0% |
! | AGACATATGAAACGAATTAT+GGG | - | chr3.1:87888653-87888672 | None:intergenic | 25.0% |
! | AGAGAGAATAAAAGTTTAAC+AGG | + | chr3.1:87889546-87889565 | MS.gene014645:intron | 25.0% |
! | AGCATTTAGATTCTTTAGAT+TGG | - | chr3.1:87891708-87891727 | None:intergenic | 25.0% |
! | AGCCATATTTAATATCATCA+AGG | - | chr3.1:87888324-87888343 | None:intergenic | 25.0% |
! | AGTTTAACTAGTCAAGTTAA+TGG | + | chr3.1:87889491-87889510 | MS.gene014645:intron | 25.0% |
! | ATAAACTTCTTATTACATCG+GGG | - | chr3.1:87890847-87890866 | None:intergenic | 25.0% |
! | ATCAGGAAAGTTTAATAATC+GGG | - | chr3.1:87891054-87891073 | None:intergenic | 25.0% |
! | CACAAAATTTGCATAACTAA+AGG | - | chr3.1:87890528-87890547 | None:intergenic | 25.0% |
! | CATTGGATAACAGTTAATAA+AGG | + | chr3.1:87889010-87889029 | MS.gene014645:intron | 25.0% |
! | CCAAAATAGAATGAAATTTG+TGG | - | chr3.1:87889657-87889676 | None:intergenic | 25.0% |
! | GAGAGAATAAAAGTTTAACA+GGG | + | chr3.1:87889547-87889566 | MS.gene014645:intron | 25.0% |
! | GGAAATTAAAAACTAGATTG+AGG | - | chr3.1:87890009-87890028 | None:intergenic | 25.0% |
! | GTTAATACTTTAATGTTGTG+AGG | + | chr3.1:87889239-87889258 | MS.gene014645:intron | 25.0% |
! | TAAATTCTAACTCATTCTAC+TGG | - | chr3.1:87891318-87891337 | None:intergenic | 25.0% |
! | TACAAAATGTTGATCTCATT+AGG | - | chr3.1:87887612-87887631 | None:intergenic | 25.0% |
! | TCTAAATGCTAAGAATCATA+CGG | + | chr3.1:87891718-87891737 | MS.gene014645:CDS | 25.0% |
! | TCTAAATTCATTATCTTCAC+TGG | + | chr3.1:87888602-87888621 | MS.gene014645:intron | 25.0% |
! | TTATCAAGGTCAAAACATTA+GGG | - | chr3.1:87889518-87889537 | None:intergenic | 25.0% |
! | TTCTATTCAACATTCATATG+CGG | + | chr3.1:87887396-87887415 | MS.gene014645:intron | 25.0% |
! | TTTAGATTCTTTAGATTGGA+TGG | - | chr3.1:87891704-87891723 | None:intergenic | 25.0% |
! | TTTATAACTTACTTTCTCCT+TGG | - | chr3.1:87888009-87888028 | None:intergenic | 25.0% |
! | TTTATCAAGGTCAAAACATT+AGG | - | chr3.1:87889519-87889538 | None:intergenic | 25.0% |
!! | AAAGAAACAAACCATTTTGA+CGG | - | chr3.1:87887480-87887499 | None:intergenic | 25.0% |
!! | AGATCATAATATTCTGGTTA+TGG | + | chr3.1:87888151-87888170 | MS.gene014645:CDS | 25.0% |
!! | ATCAATTGCACATTCTTTTT+AGG | + | chr3.1:87889821-87889840 | MS.gene014645:intron | 25.0% |
!! | ATCTCAAATAATTCCTTTTC+CGG | + | chr3.1:87889418-87889437 | MS.gene014645:intron | 25.0% |
!! | ATGAGATCAACATTTTGTAT+CGG | + | chr3.1:87887613-87887632 | MS.gene014645:intron | 25.0% |
!! | CCACAAATTTCATTCTATTT+TGG | + | chr3.1:87889654-87889673 | MS.gene014645:intron | 25.0% |
!! | TCTATTTACAAAAGTTCTAG+AGG | + | chr3.1:87888889-87888908 | MS.gene014645:intron | 25.0% |
!! | TTTTAATGCTCATTGCAAAA+CGG | + | chr3.1:87891346-87891365 | MS.gene014645:intron | 25.0% |
!!! | ATTATTTTTCACTTGGAAGT+TGG | + | chr3.1:87891474-87891493 | MS.gene014645:intron | 25.0% |
!!! | CTGCAATTTGTTACATTTAT+AGG | + | chr3.1:87888685-87888704 | MS.gene014645:intron | 25.0% |
!!! | GCTACATTTCTTTATTTTGT+AGG | + | chr3.1:87887925-87887944 | MS.gene014645:intron | 25.0% |
!!! | TATATTATTGATTTCGGACT+AGG | + | chr3.1:87888710-87888729 | MS.gene014645:CDS | 25.0% |
!!! | TGAATTATTGATTCCTGAAA+AGG | - | chr3.1:87891615-87891634 | None:intergenic | 25.0% |
!!! | TGCTTGCTTTATTTTTCAAT+TGG | + | chr3.1:87888287-87888306 | MS.gene014645:intron | 25.0% |
AAACCAGATAACTTCCTAAT+GGG | + | chr3.1:87888548-87888567 | MS.gene014645:CDS | 30.0% | |
AAATTATACAGTCTTCTCCA+AGG | + | chr3.1:87887989-87888008 | MS.gene014645:CDS | 30.0% | |
AACGAATTCTGTTCAATTGT+GGG | + | chr3.1:87891236-87891255 | MS.gene014645:intron | 30.0% | |
AACTAAAGGAGAAAGAAGAA+AGG | - | chr3.1:87890514-87890533 | None:intergenic | 30.0% | |
ACCATAATAAGTTTGGAAGT+AGG | + | chr3.1:87889267-87889286 | MS.gene014645:intron | 30.0% | |
ACCTACTTCCAAACTTATTA+TGG | - | chr3.1:87889271-87889290 | None:intergenic | 30.0% | |
ACTATGACAATTTATTCGAC+TGG | + | chr3.1:87890894-87890913 | MS.gene014645:CDS | 30.0% | |
AGATTACACAGATTACAAGT+TGG | - | chr3.1:87889402-87889421 | None:intergenic | 30.0% | |
ATATGAAACGAATTATGGGA+CGG | - | chr3.1:87888649-87888668 | None:intergenic | 30.0% | |
ATGTACTAGTAACCAATCTT+AGG | + | chr3.1:87890774-87890793 | MS.gene014645:intron | 30.0% | |
ATTAAGACATGTACATCATC+AGG | - | chr3.1:87891590-87891609 | None:intergenic | 30.0% | |
ATTCTTCATTTGTGTTTGCT+TGG | + | chr3.1:87890729-87890748 | MS.gene014645:intron | 30.0% | |
ATTGAAAATGTATACCTCAG+TGG | - | chr3.1:87889962-87889981 | None:intergenic | 30.0% | |
ATTTGGATCTCATATGGAAA+AGG | + | chr3.1:87888045-87888064 | MS.gene014645:intron | 30.0% | |
CATGTCTTAGCAATTAATAG+AGG | - | chr3.1:87891812-87891831 | None:intergenic | 30.0% | |
CTAAATGCTAAGAATCATAC+GGG | + | chr3.1:87891719-87891738 | MS.gene014645:CDS | 30.0% | |
CTCTATTAATTGCTAAGACA+TGG | + | chr3.1:87891810-87891829 | MS.gene014645:intron | 30.0% | |
CTCTCTGTATAAGTTTATCA+AGG | - | chr3.1:87889532-87889551 | None:intergenic | 30.0% | |
CTTCTTATGTTCATACAATG+AGG | + | chr3.1:87891203-87891222 | MS.gene014645:intron | 30.0% | |
GAAGATAAATACAACACAAG+AGG | - | chr3.1:87890822-87890841 | None:intergenic | 30.0% | |
GAATAAAAGTTTAACAGGGA+CGG | + | chr3.1:87889551-87889570 | MS.gene014645:CDS | 30.0% | |
GCAATTAATAGAGGATATAG+AGG | - | chr3.1:87891803-87891822 | None:intergenic | 30.0% | |
GTGATGAATGATAAAGAGAT+GGG | - | chr3.1:87887514-87887533 | None:intergenic | 30.0% | |
TAAACTTATACTTGCTTGCT+AGG | + | chr3.1:87887814-87887833 | MS.gene014645:intron | 30.0% | |
TAAACTTCTTATTACATCGG+GGG | - | chr3.1:87890846-87890865 | None:intergenic | 30.0% | |
TATTAATTGCTAAGACATGG+TGG | + | chr3.1:87891813-87891832 | MS.gene014645:intron | 30.0% | |
TATTAGGAGAAAATCAAGTC+AGG | + | chr3.1:87888571-87888590 | MS.gene014645:CDS | 30.0% | |
TGATCTATTCCTTAGATTAC+CGG | - | chr3.1:87887583-87887602 | None:intergenic | 30.0% | |
TGATGGAGATCATAATATTC+TGG | + | chr3.1:87888145-87888164 | MS.gene014645:CDS | 30.0% | |
TGGTAAATATCTGTCAATCT+TGG | - | chr3.1:87891434-87891453 | None:intergenic | 30.0% | |
TGTACTAGTAACCAATCTTA+GGG | + | chr3.1:87890775-87890794 | MS.gene014645:intron | 30.0% | |
TGTGTGACATTAAAACAATC+TGG | - | chr3.1:87888930-87888949 | None:intergenic | 30.0% | |
TTACCAAAAACTTCTGTAAC+TGG | + | chr3.1:87889069-87889088 | MS.gene014645:intron | 30.0% | |
TTACTGTCAATTGGACATAT+AGG | + | chr3.1:87890386-87890405 | MS.gene014645:intron | 30.0% | |
TTATGTACTTCTTAAGAGGA+AGG | + | chr3.1:87889733-87889752 | MS.gene014645:CDS | 30.0% | |
TTGGAGAAGACTGTATAATT+TGG | - | chr3.1:87887990-87888009 | None:intergenic | 30.0% | |
TTTGATCAAGATCCAGATTA+TGG | + | chr3.1:87890282-87890301 | MS.gene014645:CDS | 30.0% | |
! | AAATTTAGGGCTTGACTATA+TGG | + | chr3.1:87889845-87889864 | MS.gene014645:intron | 30.0% |
! | AGCTTGATAACATGGAATTA+GGG | + | chr3.1:87887747-87887766 | MS.gene014645:intron | 30.0% |
! | ATAACTTCCTAATGGGTATT+AGG | + | chr3.1:87888555-87888574 | MS.gene014645:CDS | 30.0% |
! | ATGAATGTAGCTTGATAACA+TGG | + | chr3.1:87887739-87887758 | MS.gene014645:intron | 30.0% |
! | ATTTTCTCCTAATACCCATT+AGG | - | chr3.1:87888565-87888584 | None:intergenic | 30.0% |
! | CATGTCTTAATTTCCTTTTC+AGG | + | chr3.1:87891599-87891618 | MS.gene014645:intron | 30.0% |
! | CTTGTCATATTTTTCCTCTT+TGG | - | chr3.1:87889914-87889933 | None:intergenic | 30.0% |
! | GATCATTGCCTATTTTCTTA+TGG | + | chr3.1:87889095-87889114 | MS.gene014645:intron | 30.0% |
! | TAAAACAATCTGGTTTCATG+TGG | - | chr3.1:87888920-87888939 | None:intergenic | 30.0% |
! | TAGCTTGATAACATGGAATT+AGG | + | chr3.1:87887746-87887765 | MS.gene014645:intron | 30.0% |
! | TGAGATCAACATTTTGTATC+GGG | + | chr3.1:87887614-87887633 | MS.gene014645:intron | 30.0% |
! | TGCTTATAATGGAGTTTAGA+GGG | + | chr3.1:87889297-87889316 | MS.gene014645:intron | 30.0% |
! | TGTATAATTTGTGAATGCTC+CGG | + | chr3.1:87887561-87887580 | MS.gene014645:intron | 30.0% |
! | TTCCTCTTAAGAAGTACATA+AGG | - | chr3.1:87889734-87889753 | None:intergenic | 30.0% |
! | TTGCTTATAATGGAGTTTAG+AGG | + | chr3.1:87889296-87889315 | MS.gene014645:intron | 30.0% |
! | TTTAAGATTGGTCGCAAAAT+CGG | + | chr3.1:87887302-87887321 | MS.gene014645:CDS | 30.0% |
!! | AAGAAGCATTTGGGTATATT+TGG | + | chr3.1:87888028-87888047 | MS.gene014645:intron | 30.0% |
!! | AATAGTCATTGATTCAAGTG+AGG | - | chr3.1:87891088-87891107 | None:intergenic | 30.0% |
!! | ACATTTTCTGCAGTTGATTT+GGG | - | chr3.1:87891985-87892004 | None:intergenic | 30.0% |
!! | CTTTTAAGGATTGCTATTAC+TGG | + | chr3.1:87890097-87890116 | MS.gene014645:intron | 30.0% |
!!! | AGTTTTGTTACAGTAACTTG+AGG | - | chr3.1:87891638-87891657 | None:intergenic | 30.0% |
AAAAACTAGATTGAGGGTCA+GGG | - | chr3.1:87890002-87890021 | None:intergenic | 35.0% | |
AAAATGTCTCTAAGCCTGAA+AGG | + | chr3.1:87891998-87892017 | MS.gene014645:CDS | 35.0% | |
AAGGAGACAAAAGCAATCAT+CGG | + | chr3.1:87890949-87890968 | MS.gene014645:CDS | 35.0% | |
AATAGAGTACATGCATTCCA+AGG | + | chr3.1:87888505-87888524 | MS.gene014645:CDS | 35.0% | |
AATCCAGCTGCTTGAAATAT+GGG | - | chr3.1:87892067-87892086 | None:intergenic | 35.0% | |
ACATACTGCATACAGTACAT+AGG | + | chr3.1:87890569-87890588 | MS.gene014645:intron | 35.0% | |
AGTCTTTCTTAGTTGAACAG+CGG | - | chr3.1:87891525-87891544 | None:intergenic | 35.0% | |
AGTTTAAACCCTGATCATCA+AGG | + | chr3.1:87887692-87887711 | MS.gene014645:intron | 35.0% | |
ATACCCATTAGGAAGTTATC+TGG | - | chr3.1:87888554-87888573 | None:intergenic | 35.0% | |
ATAGAGTACATGCATTCCAA+GGG | + | chr3.1:87888506-87888525 | MS.gene014645:CDS | 35.0% | |
ATAGTTCCAGGTATTCATGT+AGG | - | chr3.1:87890057-87890076 | None:intergenic | 35.0% | |
ATCGAAAAGTTACCTCTTGT+AGG | + | chr3.1:87888395-87888414 | MS.gene014645:intron | 35.0% | |
ATTGTTTCGTCAATAGTTCC+AGG | - | chr3.1:87890069-87890088 | None:intergenic | 35.0% | |
CAAACCAGATAACTTCCTAA+TGG | + | chr3.1:87888547-87888566 | MS.gene014645:CDS | 35.0% | |
CAAGCAAGCATATTCCTTAT+AGG | + | chr3.1:87888756-87888775 | MS.gene014645:CDS | 35.0% | |
CAAGGATGCCATAAGAAAAT+AGG | - | chr3.1:87889106-87889125 | None:intergenic | 35.0% | |
CAATAGACTCCAAATCATCA+CGG | - | chr3.1:87889704-87889723 | None:intergenic | 35.0% | |
CGTGATGAATGATAAAGAGA+TGG | - | chr3.1:87887515-87887534 | None:intergenic | 35.0% | |
CTCAACAACTATTGTGTACA+AGG | + | chr3.1:87887882-87887901 | MS.gene014645:intron | 35.0% | |
CTCAACTGATTAGGGTTAAA+AGG | + | chr3.1:87887655-87887674 | MS.gene014645:intron | 35.0% | |
CTCATTGCAAAACGGAAAAA+AGG | + | chr3.1:87891354-87891373 | MS.gene014645:intron | 35.0% | |
CTTCAATGATAAAACCTCTC+AGG | - | chr3.1:87890151-87890170 | None:intergenic | 35.0% | |
GAACGAATTCTGTTCAATTG+TGG | + | chr3.1:87891235-87891254 | MS.gene014645:intron | 35.0% | |
GGAGATGACCATAATAAGTT+TGG | + | chr3.1:87889260-87889279 | MS.gene014645:intron | 35.0% | |
GGGTATATTTGGATCTCATA+TGG | + | chr3.1:87888039-87888058 | MS.gene014645:intron | 35.0% | |
GTCCTTATGTACTTCTTAAG+AGG | + | chr3.1:87889729-87889748 | MS.gene014645:CDS | 35.0% | |
GTCTCTATGTAAAAATCCCT+TGG | - | chr3.1:87888525-87888544 | None:intergenic | 35.0% | |
GTGAGGAAGAGAATAAAATC+AGG | - | chr3.1:87891071-87891090 | None:intergenic | 35.0% | |
GTGCTTAAGTAGAGATATTC+TGG | - | chr3.1:87890551-87890570 | None:intergenic | 35.0% | |
TAAAAACTAGATTGAGGGTC+AGG | - | chr3.1:87890003-87890022 | None:intergenic | 35.0% | |
TACAAGCTTAGCTGTAAAGA+AGG | - | chr3.1:87889632-87889651 | None:intergenic | 35.0% | |
TATGAAACGAATTATGGGAC+GGG | - | chr3.1:87888648-87888667 | None:intergenic | 35.0% | |
TCATGTAGGTCAAAGTATGA+GGG | - | chr3.1:87890043-87890062 | None:intergenic | 35.0% | |
TGATGATCAGGGTTTAAACT+CGG | - | chr3.1:87887692-87887711 | None:intergenic | 35.0% | |
TGCAATACTCACTTAGGAAT+CGG | + | chr3.1:87889588-87889607 | MS.gene014645:CDS | 35.0% | |
TGCATTTACTGGAATGCATA+TGG | + | chr3.1:87891016-87891035 | MS.gene014645:intron | 35.0% | |
TGGATCTTGATCAAATGTCA+AGG | - | chr3.1:87890277-87890296 | None:intergenic | 35.0% | |
TTAGGGTTAAAAGGAGTTTG+AGG | + | chr3.1:87887664-87887683 | MS.gene014645:intron | 35.0% | |
TTATAACTGCACAGTAGTAC+TGG | - | chr3.1:87889136-87889155 | None:intergenic | 35.0% | |
TTCATGTAGGTCAAAGTATG+AGG | - | chr3.1:87890044-87890063 | None:intergenic | 35.0% | |
TTCTTTAGATTGGATGGCTT+AGG | - | chr3.1:87891698-87891717 | None:intergenic | 35.0% | |
TTTGGCTGAATTTAATGAGC+AGG | + | chr3.1:87890866-87890885 | MS.gene014645:intron | 35.0% | |
! | ACACCAGTTACAGAAGTTTT+TGG | - | chr3.1:87889075-87889094 | None:intergenic | 35.0% |
! | ACATTTTGTATCGGGTTTGA+TGG | + | chr3.1:87887622-87887641 | MS.gene014645:intron | 35.0% |
! | AGGAATATGCTTGCTTGTTT+TGG | - | chr3.1:87888753-87888772 | None:intergenic | 35.0% |
! | ATTCTGGTTATGGATCTTCT+GGG | + | chr3.1:87888161-87888180 | MS.gene014645:CDS | 35.0% |
! | CATTTTGTATCGGGTTTGAT+GGG | + | chr3.1:87887623-87887642 | MS.gene014645:intron | 35.0% |
! | CTTATAATGGAGTTTAGAGG+GGG | + | chr3.1:87889299-87889318 | MS.gene014645:intron | 35.0% |
! | CTTCTGAGAACAAGGAATAT+GGG | - | chr3.1:87890202-87890221 | None:intergenic | 35.0% |
! | GACATTTTCTGCAGTTGATT+TGG | - | chr3.1:87891986-87892005 | None:intergenic | 35.0% |
! | GCTTATAATGGAGTTTAGAG+GGG | + | chr3.1:87889298-87889317 | MS.gene014645:intron | 35.0% |
! | GTCAGGGGTTAATCATTTTA+TGG | - | chr3.1:87889986-87890005 | None:intergenic | 35.0% |
! | TATTCTGGTTATGGATCTTC+TGG | + | chr3.1:87888160-87888179 | MS.gene014645:CDS | 35.0% |
! | TCGGACTAGGAAAAAGATAT+CGG | + | chr3.1:87888723-87888742 | MS.gene014645:CDS | 35.0% |
! | TGGAATTAGGGATGTGTTTT+TGG | + | chr3.1:87887759-87887778 | MS.gene014645:intron | 35.0% |
! | TTCTGATTCGTCTTACACTT+CGG | + | chr3.1:87888084-87888103 | MS.gene014645:intron | 35.0% |
!! | CGCTTTAAGAATCCATAATC+TGG | - | chr3.1:87890297-87890316 | None:intergenic | 35.0% |
!! | GGAATATGCTTGCTTGTTTT+GGG | - | chr3.1:87888752-87888771 | None:intergenic | 35.0% |
!! | TTTTGCATTTTAGCCTTCCT+TGG | + | chr3.1:87889869-87889888 | MS.gene014645:intron | 35.0% |
!!! | GAATATGCTTGCTTGTTTTG+GGG | - | chr3.1:87888751-87888770 | None:intergenic | 35.0% |
!!! | TGTTTTAGCCTGTTGAATGT+AGG | + | chr3.1:87890455-87890474 | MS.gene014645:intron | 35.0% |
AAAACTAGATTGAGGGTCAG+GGG | - | chr3.1:87890001-87890020 | None:intergenic | 40.0% | |
AAAATCGGAAGCGGTTCATT+TGG | + | chr3.1:87887317-87887336 | MS.gene014645:intron | 40.0% | |
AAAGTAAGACGCAAACTCCA+CGG | - | chr3.1:87890241-87890260 | None:intergenic | 40.0% | |
AATCAGAACTCAGAAGAGTC+CGG | - | chr3.1:87889440-87889459 | None:intergenic | 40.0% | |
AGAAGAAATCCAATGGCAGT+CGG | - | chr3.1:87891772-87891791 | None:intergenic | 40.0% | |
AGCTAGTACGAATCAGCATT+AGG | - | chr3.1:87887908-87887927 | None:intergenic | 40.0% | |
ATGAATCAGTGGTTACCATC+TGG | - | chr3.1:87888259-87888278 | None:intergenic | 40.0% | |
ATTCCAACTATGAGATGGTG+CGG | + | chr3.1:87888119-87888138 | MS.gene014645:CDS | 40.0% | |
CAAACCTAGGTCGTGTATTT+GGG | + | chr3.1:87892034-87892053 | MS.gene014645:CDS | 40.0% | |
CAATGATAAAACCTCTCAGG+AGG | - | chr3.1:87890148-87890167 | None:intergenic | 40.0% | |
CACATTTGGACGATCAAGAT+TGG | - | chr3.1:87891666-87891685 | None:intergenic | 40.0% | |
CTTTGACCTACATGAATACC+TGG | + | chr3.1:87890048-87890067 | MS.gene014645:intron | 40.0% | |
GAAGAAATTCGCCGTAAAGA+AGG | - | chr3.1:87892090-87892109 | None:intergenic | 40.0% | |
GAAGTTATCAACTTCCACTG+AGG | + | chr3.1:87889945-87889964 | MS.gene014645:CDS | 40.0% | |
GAATCCAGCTGCTTGAAATA+TGG | - | chr3.1:87892068-87892087 | None:intergenic | 40.0% | |
GCAAGTTGCAATACTCACTT+AGG | + | chr3.1:87889582-87889601 | MS.gene014645:CDS | 40.0% | |
GCAATCCAGATATGAATCAG+TGG | - | chr3.1:87888270-87888289 | None:intergenic | 40.0% | |
GCATCCACAACTATTGTATG+AGG | + | chr3.1:87887964-87887983 | MS.gene014645:CDS | 40.0% | |
GTGGTATTCCAACTATGAGA+TGG | + | chr3.1:87888114-87888133 | MS.gene014645:CDS | 40.0% | |
GTGGTTGTGGAAAAACATAC+AGG | + | chr3.1:87891170-87891189 | MS.gene014645:CDS | 40.0% | |
TAATGCCTCCTACATTCAAC+AGG | - | chr3.1:87890466-87890485 | None:intergenic | 40.0% | |
TAATTTCTTCCGACTGCCAT+TGG | + | chr3.1:87891760-87891779 | MS.gene014645:intron | 40.0% | |
TACTCTATTCTCGAAAGCTG+TGG | - | chr3.1:87888494-87888513 | None:intergenic | 40.0% | |
TATTCCCAAATACACGACCT+AGG | - | chr3.1:87892041-87892060 | None:intergenic | 40.0% | |
TCAAACCTAGGTCGTGTATT+TGG | + | chr3.1:87892033-87892052 | MS.gene014645:CDS | 40.0% | |
TGTAGGAGAAGAAGAGAACA+AGG | + | chr3.1:87887942-87887961 | MS.gene014645:intron | 40.0% | |
TTCACTTGGAAGTTGGAACT+TGG | + | chr3.1:87891481-87891500 | MS.gene014645:intron | 40.0% | |
TTGGCCTCATACAATAGTTG+TGG | - | chr3.1:87887971-87887990 | None:intergenic | 40.0% | |
TTGGGTAGCTCAACTGATTA+GGG | + | chr3.1:87887647-87887666 | MS.gene014645:intron | 40.0% | |
TTGTTCTCAAGACCACATGT+AGG | - | chr3.1:87890613-87890632 | None:intergenic | 40.0% | |
TTTAGCCTGTTGAATGTAGG+AGG | + | chr3.1:87890458-87890477 | MS.gene014645:intron | 40.0% | |
TTTGATGTTAGCAGACCAGA+TGG | + | chr3.1:87888241-87888260 | MS.gene014645:CDS | 40.0% | |
TTTGGGTAGCTCAACTGATT+AGG | + | chr3.1:87887646-87887665 | MS.gene014645:intron | 40.0% | |
! | AGTAGCTACCTTGATGATCA+GGG | - | chr3.1:87887703-87887722 | None:intergenic | 40.0% |
! | ATGGTCTAGCTTGCATTTAC+TGG | + | chr3.1:87891005-87891024 | MS.gene014645:intron | 40.0% |
! | CGGACTAGGAAAAAGATATC+GGG | + | chr3.1:87888724-87888743 | MS.gene014645:CDS | 40.0% |
! | CGTCTTACACTTCGGATTTT+AGG | + | chr3.1:87888092-87888111 | MS.gene014645:intron | 40.0% |
! | CGTGATGATTTGGAGTCTAT+TGG | + | chr3.1:87889702-87889721 | MS.gene014645:CDS | 40.0% |
! | CTTACACTTCGGATTTTAGG+TGG | + | chr3.1:87888095-87888114 | MS.gene014645:intron | 40.0% |
! | GCTTCTGAGAACAAGGAATA+TGG | - | chr3.1:87890203-87890222 | None:intergenic | 40.0% |
! | GTATGTTTTTCCACAACCAC+TGG | - | chr3.1:87891170-87891189 | None:intergenic | 40.0% |
! | GTTGCGTCTGCTGATATTTT+AGG | - | chr3.1:87890925-87890944 | None:intergenic | 40.0% |
! | GTTGGCGGAAAGTTTAAGAT+TGG | + | chr3.1:87887290-87887309 | MS.gene014645:CDS | 40.0% |
! | TAGGGTTTCAGAGTTGTTTC+TGG | + | chr3.1:87890793-87890812 | MS.gene014645:intron | 40.0% |
! | TAGTAGCTACCTTGATGATC+AGG | - | chr3.1:87887704-87887723 | None:intergenic | 40.0% |
! | TTTGAGATGAGACCTACATG+TGG | + | chr3.1:87890598-87890617 | MS.gene014645:intron | 40.0% |
!! | AGTAGTACTGGTACACATCA+AGG | - | chr3.1:87889124-87889143 | None:intergenic | 40.0% |
!! | ATAGGAGCATTTCCTACAAG+AGG | - | chr3.1:87888410-87888429 | None:intergenic | 40.0% |
!! | CAACTCTGAAACCCTAAGAT+TGG | - | chr3.1:87890789-87890808 | None:intergenic | 40.0% |
!! | CGTCTGCTGATATTTTAGGA+TGG | - | chr3.1:87890921-87890940 | None:intergenic | 40.0% |
!! | GGTAACCACTGATTCATATC+TGG | + | chr3.1:87888262-87888281 | MS.gene014645:intron | 40.0% |
!!! | AGAGGGGGTATTTTGTGAAA+TGG | + | chr3.1:87889314-87889333 | MS.gene014645:intron | 40.0% |
AACTCAGAAGAGTCCGGAAA+AGG | - | chr3.1:87889434-87889453 | None:intergenic | 45.0% | |
AAGTAAGACGCAAACTCCAC+GGG | - | chr3.1:87890240-87890259 | None:intergenic | 45.0% | |
ACTAGGAACAGCACTAGGTA+CGG | - | chr3.1:87891126-87891145 | None:intergenic | 45.0% | |
ACTCCCATATTTCAAGCAGC+TGG | + | chr3.1:87892061-87892080 | MS.gene014645:CDS | 45.0% | |
AGGAAATGCTCCTATCCACA+GGG | + | chr3.1:87888415-87888434 | MS.gene014645:intron | 45.0% | |
AGTATGAGGGCGAGAAGAAA+AGG | - | chr3.1:87890030-87890049 | None:intergenic | 45.0% | |
ATAAAACCTCTCAGGAGGAG+GGG | - | chr3.1:87890143-87890162 | None:intergenic | 45.0% | |
ATTGGTCGCAAAATCGGAAG+CGG | + | chr3.1:87887308-87887327 | MS.gene014645:CDS | 45.0% | |
CAATGATCCGTCCACTTCAT+CGG | + | chr3.1:87891954-87891973 | MS.gene014645:CDS | 45.0% | |
CATTGAAAGTCCCTGTGGAT+AGG | - | chr3.1:87888428-87888447 | None:intergenic | 45.0% | |
GATAAAACCTCTCAGGAGGA+GGG | - | chr3.1:87890144-87890163 | None:intergenic | 45.0% | |
GCAGCTGGATTCCTTCTTTA+CGG | + | chr3.1:87892076-87892095 | MS.gene014645:CDS | 45.0% | |
GCTTTCATTGAAAGTCCCTG+TGG | - | chr3.1:87888433-87888452 | None:intergenic | 45.0% | |
GTGAATGCTCCGGTAATCTA+AGG | + | chr3.1:87887571-87887590 | MS.gene014645:intron | 45.0% | |
TAGGAAATGCTCCTATCCAC+AGG | + | chr3.1:87888414-87888433 | MS.gene014645:intron | 45.0% | |
TCTGAAAGCTGTCACCAAAG+AGG | + | chr3.1:87889897-87889916 | MS.gene014645:CDS | 45.0% | |
TGATAAAACCTCTCAGGAGG+AGG | - | chr3.1:87890145-87890164 | None:intergenic | 45.0% | |
! | ACCTAGGTTTGAAGTTCCTG+TGG | - | chr3.1:87892025-87892044 | None:intergenic | 45.0% |
! | AGGACCTTTTTGTCTTCTGC+GGG | + | chr3.1:87888195-87888214 | MS.gene014645:CDS | 45.0% |
! | CCTAGGTTTGAAGTTCCTGT+GGG | - | chr3.1:87892024-87892043 | None:intergenic | 45.0% |
! | GAGGACCTTTTTGTCTTCTG+CGG | + | chr3.1:87888194-87888213 | MS.gene014645:CDS | 45.0% |
! | GATGGACTCAAAGTGTCTAC+TGG | + | chr3.1:87889177-87889196 | MS.gene014645:intron | 45.0% |
! | GCTTTTTGCAGCCTCTGATA+TGG | + | chr3.1:87887436-87887455 | MS.gene014645:intron | 45.0% |
! | TCGCAAAGCTTCTGAGAACA+AGG | - | chr3.1:87890210-87890229 | None:intergenic | 45.0% |
!! | CATTTTAGCCTTCCTTGGCA+GGG | + | chr3.1:87889874-87889893 | MS.gene014645:intron | 45.0% |
!! | GTATCGGGTTTGATGGGTTT+GGG | + | chr3.1:87887629-87887648 | MS.gene014645:intron | 45.0% |
!! | TGTATCGGGTTTGATGGGTT+TGG | + | chr3.1:87887628-87887647 | MS.gene014645:intron | 45.0% |
ACAGCACTAGGAACAGCACT+AGG | - | chr3.1:87891131-87891150 | None:intergenic | 50.0% | |
ATCAGCAGACGCAACAGACA+AGG | + | chr3.1:87890930-87890949 | MS.gene014645:CDS | 50.0% | |
CAGTCTACAACCAGTGGTTG+TGG | + | chr3.1:87891157-87891176 | MS.gene014645:CDS | 50.0% | |
CCCACAGGAACTTCAAACCT+AGG | + | chr3.1:87892021-87892040 | MS.gene014645:CDS | 50.0% | |
CGTGAGTTGTTCACTCGTGA+AGG | + | chr3.1:87890324-87890343 | MS.gene014645:CDS | 50.0% | |
CTCTGATATGGACACCTCTG+AGG | + | chr3.1:87887448-87887467 | MS.gene014645:CDS | 50.0% | |
GCAAAGTCGCCGTGATGATT+TGG | + | chr3.1:87889692-87889711 | MS.gene014645:CDS | 50.0% | |
GCTTTGCGAATCATATCCCG+TGG | + | chr3.1:87890221-87890240 | MS.gene014645:CDS | 50.0% | |
GTACCGCACCATCTCATAGT+TGG | - | chr3.1:87888125-87888144 | None:intergenic | 50.0% | |
TGAGGTCGTTGCCGTCAAAA+TGG | + | chr3.1:87887466-87887485 | MS.gene014645:CDS | 50.0% | |
TGCTCCCGCAGAAGACAAAA+AGG | - | chr3.1:87888202-87888221 | None:intergenic | 50.0% | |
TTAGGCTGCACACGCACATT+TGG | - | chr3.1:87891680-87891699 | None:intergenic | 50.0% | |
TTTGGGCAAAGCCGATGAAG+TGG | - | chr3.1:87891968-87891987 | None:intergenic | 50.0% | |
! | ACCACTGGTTGTAGACTGCT+AGG | - | chr3.1:87891155-87891174 | None:intergenic | 50.0% |
! | ATGAGATGGTGCGGTACTGA+TGG | + | chr3.1:87888128-87888147 | MS.gene014645:CDS | 50.0% |
!! | CTCAGAGGTGTCCATATCAG+AGG | - | chr3.1:87887450-87887469 | None:intergenic | 50.0% |
!! | GCATTTTAGCCTTCCTTGGC+AGG | + | chr3.1:87889873-87889892 | MS.gene014645:intron | 50.0% |
ACAGCTTTCAGACCCTGCCA+AGG | - | chr3.1:87889889-87889908 | None:intergenic | 55.0% | |
AGACTGCTAGGCACAGCACT+AGG | - | chr3.1:87891143-87891162 | None:intergenic | 55.0% | |
CTTTCAGACCCTGCCAAGGA+AGG | - | chr3.1:87889885-87889904 | None:intergenic | 55.0% | |
GAAGTTCCTGTGGGCCTTTC+AGG | - | chr3.1:87892015-87892034 | None:intergenic | 55.0% | |
GCACTAGGTACGGCATCTGA+AGG | - | chr3.1:87891116-87891135 | None:intergenic | 55.0% | |
GCCTAGCAGTCTACAACCAG+TGG | + | chr3.1:87891151-87891170 | MS.gene014645:CDS | 55.0% | |
GGCAAAGCCGATGAAGTGGA+CGG | - | chr3.1:87891964-87891983 | None:intergenic | 55.0% | |
TCTAAGCCTGAAAGGCCCAC+AGG | + | chr3.1:87892006-87892025 | MS.gene014645:CDS | 55.0% | |
TTTGACGGCAACGACCTCAG+AGG | - | chr3.1:87887465-87887484 | None:intergenic | 55.0% | |
!! | GGATCTTCTGGGACGTAGTC+TGG | + | chr3.1:87888172-87888191 | MS.gene014645:CDS | 55.0% |
!! | TCTTCTGGGACGTAGTCTGG+AGG | + | chr3.1:87888175-87888194 | MS.gene014645:CDS | 55.0% |
AGTTAGCCCCTCCTCCTGAG+AGG | + | chr3.1:87890134-87890153 | MS.gene014645:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.1 | gene | 87887278 | 87892119 | 87887278 | ID=MS.gene014645 |
chr3.1 | mRNA | 87887278 | 87892119 | 87887278 | ID=MS.gene014645.t1;Parent=MS.gene014645 |
chr3.1 | exon | 87887278 | 87887329 | 87887278 | ID=MS.gene014645.t1.exon1;Parent=MS.gene014645.t1 |
chr3.1 | CDS | 87887278 | 87887329 | 87887278 | ID=cds.MS.gene014645.t1;Parent=MS.gene014645.t1 |
chr3.1 | exon | 87887447 | 87887487 | 87887447 | ID=MS.gene014645.t1.exon2;Parent=MS.gene014645.t1 |
chr3.1 | CDS | 87887447 | 87887487 | 87887447 | ID=cds.MS.gene014645.t1;Parent=MS.gene014645.t1 |
chr3.1 | exon | 87887947 | 87888016 | 87887947 | ID=MS.gene014645.t1.exon3;Parent=MS.gene014645.t1 |
chr3.1 | CDS | 87887947 | 87888016 | 87887947 | ID=cds.MS.gene014645.t1;Parent=MS.gene014645.t1 |
chr3.1 | exon | 87888114 | 87888262 | 87888114 | ID=MS.gene014645.t1.exon4;Parent=MS.gene014645.t1 |
chr3.1 | CDS | 87888114 | 87888262 | 87888114 | ID=cds.MS.gene014645.t1;Parent=MS.gene014645.t1 |
chr3.1 | exon | 87888497 | 87888592 | 87888497 | ID=MS.gene014645.t1.exon5;Parent=MS.gene014645.t1 |
chr3.1 | CDS | 87888497 | 87888592 | 87888497 | ID=cds.MS.gene014645.t1;Parent=MS.gene014645.t1 |
chr3.1 | exon | 87888707 | 87888777 | 87888707 | ID=MS.gene014645.t1.exon6;Parent=MS.gene014645.t1 |
chr3.1 | CDS | 87888707 | 87888777 | 87888707 | ID=cds.MS.gene014645.t1;Parent=MS.gene014645.t1 |
chr3.1 | exon | 87889548 | 87889609 | 87889548 | ID=MS.gene014645.t1.exon7;Parent=MS.gene014645.t1 |
chr3.1 | CDS | 87889548 | 87889609 | 87889548 | ID=cds.MS.gene014645.t1;Parent=MS.gene014645.t1 |
chr3.1 | exon | 87889691 | 87889754 | 87889691 | ID=MS.gene014645.t1.exon8;Parent=MS.gene014645.t1 |
chr3.1 | CDS | 87889691 | 87889754 | 87889691 | ID=cds.MS.gene014645.t1;Parent=MS.gene014645.t1 |
chr3.1 | exon | 87889882 | 87889966 | 87889882 | ID=MS.gene014645.t1.exon9;Parent=MS.gene014645.t1 |
chr3.1 | CDS | 87889882 | 87889966 | 87889882 | ID=cds.MS.gene014645.t1;Parent=MS.gene014645.t1 |
chr3.1 | exon | 87890219 | 87890345 | 87890219 | ID=MS.gene014645.t1.exon10;Parent=MS.gene014645.t1 |
chr3.1 | CDS | 87890219 | 87890345 | 87890219 | ID=cds.MS.gene014645.t1;Parent=MS.gene014645.t1 |
chr3.1 | exon | 87890888 | 87890970 | 87890888 | ID=MS.gene014645.t1.exon11;Parent=MS.gene014645.t1 |
chr3.1 | CDS | 87890888 | 87890970 | 87890888 | ID=cds.MS.gene014645.t1;Parent=MS.gene014645.t1 |
chr3.1 | exon | 87891113 | 87891191 | 87891113 | ID=MS.gene014645.t1.exon12;Parent=MS.gene014645.t1 |
chr3.1 | CDS | 87891113 | 87891191 | 87891113 | ID=cds.MS.gene014645.t1;Parent=MS.gene014645.t1 |
chr3.1 | exon | 87891621 | 87891748 | 87891621 | ID=MS.gene014645.t1.exon13;Parent=MS.gene014645.t1 |
chr3.1 | CDS | 87891621 | 87891748 | 87891621 | ID=cds.MS.gene014645.t1;Parent=MS.gene014645.t1 |
chr3.1 | exon | 87891946 | 87892119 | 87891946 | ID=MS.gene014645.t1.exon14;Parent=MS.gene014645.t1 |
chr3.1 | CDS | 87891946 | 87892119 | 87891946 | ID=cds.MS.gene014645.t1;Parent=MS.gene014645.t1 |
Gene Sequence |
Protein sequence |