Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene014656.t1 | XP_024634048.1 | 93.6 | 596 | 37 | 1 | 1 | 596 | 1 | 595 | 0.00E+00 | 1085.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene014656.t1 | Q9SZD1 | 38.5 | 590 | 281 | 18 | 13 | 571 | 24 | 562 | 3.4e-85 | 317.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene014656.t1 | A0A072V2F6 | 89.5 | 598 | 59 | 4 | 1 | 596 | 1 | 596 | 5.0e-295 | 1022.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene014656.t1 | TF | CPP |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene014656.t1 | MTR_3g110122 | 91.973 | 598 | 44 | 4 | 1 | 596 | 1 | 596 | 0.0 | 1096 |
MS.gene014656.t1 | MTR_6g087590 | 45.376 | 465 | 225 | 10 | 125 | 570 | 107 | 561 | 1.12e-116 | 360 |
MS.gene014656.t1 | MTR_8g103320 | 45.227 | 440 | 215 | 11 | 109 | 530 | 44 | 475 | 2.83e-111 | 342 |
MS.gene014656.t1 | MTR_1g012020 | 44.604 | 139 | 73 | 4 | 148 | 282 | 498 | 636 | 1.50e-28 | 121 |
MS.gene014656.t1 | MTR_5g006530 | 48.800 | 125 | 60 | 4 | 148 | 269 | 488 | 611 | 5.80e-27 | 116 |
MS.gene014656.t1 | MTR_5g006530 | 48.800 | 125 | 60 | 4 | 148 | 269 | 264 | 387 | 8.07e-27 | 115 |
MS.gene014656.t1 | MTR_1g103230 | 41.739 | 115 | 63 | 4 | 156 | 267 | 446 | 559 | 7.51e-13 | 72.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene014656.t1 | AT4G29000 | 40.433 | 554 | 243 | 18 | 13 | 533 | 24 | 523 | 4.10e-112 | 348 |
MS.gene014656.t1 | AT2G20110 | 40.883 | 521 | 247 | 14 | 84 | 590 | 66 | 539 | 1.53e-105 | 329 |
MS.gene014656.t1 | AT2G20110 | 41.352 | 503 | 240 | 13 | 84 | 572 | 66 | 527 | 9.77e-105 | 328 |
MS.gene014656.t1 | AT2G20110 | 40.588 | 510 | 241 | 13 | 84 | 572 | 66 | 534 | 8.83e-103 | 323 |
MS.gene014656.t1 | AT5G25790 | 36.722 | 482 | 248 | 15 | 49 | 524 | 11 | 441 | 1.03e-82 | 267 |
MS.gene014656.t1 | AT5G25790 | 35.714 | 504 | 267 | 15 | 49 | 546 | 11 | 463 | 1.85e-82 | 268 |
MS.gene014656.t1 | AT5G25790 | 36.515 | 482 | 245 | 16 | 49 | 524 | 11 | 437 | 3.97e-82 | 265 |
MS.gene014656.t1 | AT3G16160 | 44.737 | 152 | 80 | 2 | 116 | 266 | 34 | 182 | 3.11e-32 | 128 |
MS.gene014656.t1 | AT3G22760 | 41.401 | 157 | 87 | 3 | 126 | 280 | 186 | 339 | 1.50e-28 | 119 |
MS.gene014656.t1 | AT3G22760 | 41.401 | 157 | 87 | 3 | 126 | 280 | 309 | 462 | 2.25e-28 | 120 |
MS.gene014656.t1 | AT4G14770 | 46.774 | 124 | 64 | 2 | 148 | 269 | 375 | 498 | 4.72e-28 | 119 |
MS.gene014656.t1 | AT4G14770 | 46.774 | 124 | 64 | 2 | 148 | 269 | 355 | 478 | 7.06e-28 | 119 |
MS.gene014656.t1 | AT4G14770 | 46.774 | 124 | 64 | 2 | 148 | 269 | 356 | 479 | 7.09e-28 | 119 |
MS.gene014656.t1 | AT3G22780 | 42.029 | 138 | 78 | 2 | 148 | 283 | 401 | 538 | 1.03e-27 | 119 |
MS.gene014656.t1 | AT3G04850 | 45.968 | 124 | 65 | 2 | 148 | 269 | 453 | 576 | 5.40e-27 | 116 |
Find 126 sgRNAs with CRISPR-Local
Find 358 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CACATCAATTTAAGTGTTTC+TGG | 0.101248 | 3.1:+87716493 | None:intergenic |
GCTAAAGTACTTACAATTTA+AGG | 0.107021 | 3.1:+87718340 | None:intergenic |
TTCTCTTCTTGGGTGTTATA+TGG | 0.169921 | 3.1:+87717640 | None:intergenic |
ATTATTATTGGTAGCATTAA+AGG | 0.183098 | 3.1:-87716298 | MS.gene014656:intron |
CATTCCAATTGCCTCCTTTC+GGG | 0.215507 | 3.1:+87718146 | None:intergenic |
ATTTGTCTTTGCAGCTTCTT+TGG | 0.243681 | 3.1:+87716971 | None:intergenic |
GCAACTAATGCTGCCATTAA+TGG | 0.244194 | 3.1:-87717696 | MS.gene014656:CDS |
TCAAAATAAAGCAGGGTTAA+AGG | 0.248253 | 3.1:-87718412 | MS.gene014656:CDS |
TACTTACAATTTAAGGCATT+TGG | 0.284828 | 3.1:+87718347 | None:intergenic |
TCTCTTCTTGGGTGTTATAT+GGG | 0.286069 | 3.1:+87717641 | None:intergenic |
AAAATCACATACCTGAATTT+AGG | 0.297536 | 3.1:+87717148 | None:intergenic |
CTTGGTGAACTGATTATTAT+TGG | 0.298905 | 3.1:-87716310 | MS.gene014656:CDS |
TCATTCCAATTGCCTCCTTT+CGG | 0.299863 | 3.1:+87718145 | None:intergenic |
AAGTCCAACTGCTCCATTAA+TGG | 0.310344 | 3.1:+87717683 | None:intergenic |
TTGATATTGACATTCATAAT+AGG | 0.314713 | 3.1:-87716525 | MS.gene014656:CDS |
GTGTCTGAAATTCAATTAAT+AGG | 0.329611 | 3.1:-87717897 | MS.gene014656:CDS |
GGCTTATCCTGACCAAGTTC+AGG | 0.337443 | 3.1:-87716339 | MS.gene014656:CDS |
TCGGAAATTTGCGCGGCAAT+TGG | 0.338947 | 3.1:-87719943 | MS.gene014656:CDS |
TCCTCCGGCGCAAATGCATT+TGG | 0.349311 | 3.1:-87719814 | MS.gene014656:CDS |
AATAGAAGCTTCATATTTCT+CGG | 0.353823 | 3.1:+87716636 | None:intergenic |
CTACTAACCATAGAAACTTC+TGG | 0.357925 | 3.1:+87718066 | None:intergenic |
TTTGCATGATTCTCCGAAAC+AGG | 0.382385 | 3.1:+87716568 | None:intergenic |
ACCAAGTTCAGGGATGTTCT+TGG | 0.382968 | 3.1:-87716328 | MS.gene014656:CDS |
AACCTCTTCACCGGAAGCTT+TGG | 0.384541 | 3.1:+87719642 | None:intergenic |
AGATGTTGCCAAGCCTGTTT+CGG | 0.392240 | 3.1:-87716581 | MS.gene014656:CDS |
TTCGGTAATGGTTCTGCAAA+TGG | 0.394963 | 3.1:-87716448 | MS.gene014656:CDS |
AACACTCACAATACTTCTTA+AGG | 0.401328 | 3.1:+87717838 | None:intergenic |
TTAATAGGAAGGCACAATAA+AGG | 0.404131 | 3.1:-87717882 | MS.gene014656:CDS |
TAATTTCAAGACCTAAATTC+AGG | 0.410173 | 3.1:-87717159 | MS.gene014656:intron |
GCGTCGGTGGCGACAATGTC+AGG | 0.412454 | 3.1:+87719889 | None:intergenic |
TGTTTCCACGGCCGTCTCAC+TGG | 0.412786 | 3.1:+87719780 | None:intergenic |
GGACTTGGACCCTCCATCTC+TGG | 0.418333 | 3.1:-87717666 | MS.gene014656:CDS |
ATTAATGGAGCAGTTGGACT+TGG | 0.419842 | 3.1:-87717681 | MS.gene014656:CDS |
GCTACCTATGCAAGAACTAA+TGG | 0.420530 | 3.1:-87714612 | MS.gene014656:CDS |
TAAATTGATGTGTGATGAAC+AGG | 0.421391 | 3.1:-87716482 | MS.gene014656:CDS |
AGCCACTGGGATGGAGCAAT+TGG | 0.435821 | 3.1:+87714632 | None:intergenic |
GTACTCCACACCAAAGCTTC+CGG | 0.447922 | 3.1:-87719652 | MS.gene014656:CDS |
TACTGTGAGTGCTATGCAGC+TGG | 0.448205 | 3.1:-87718228 | MS.gene014656:CDS |
AAAGGAAGCTGACAGGGATA+AGG | 0.448296 | 3.1:+87717204 | None:intergenic |
TTCAAATTTCCAGAAATGAG+AGG | 0.459036 | 3.1:-87716682 | MS.gene014656:intron |
CATGACTGCTCAACACCAAC+AGG | 0.463692 | 3.1:-87717568 | MS.gene014656:intron |
ACCAAGAACATCCCTGAACT+TGG | 0.469962 | 3.1:+87716327 | None:intergenic |
TGATAGTGGTGCTGAAACTA+AGG | 0.471033 | 3.1:-87714679 | MS.gene014656:CDS |
CACTGCTGTTTATGCAGAGC+AGG | 0.471249 | 3.1:-87716365 | MS.gene014656:CDS |
CTGTTTATGCAGAGCAGGAA+AGG | 0.476553 | 3.1:-87716360 | MS.gene014656:CDS |
AAGGAAGCTGACAGGGATAA+GGG | 0.478405 | 3.1:+87717205 | None:intergenic |
TCACAGCCTCAAAATAAAGC+AGG | 0.479128 | 3.1:-87718420 | MS.gene014656:CDS |
GCTGCCCGAAAGGAGGCAAT+TGG | 0.479529 | 3.1:-87718150 | MS.gene014656:CDS |
GTTCTTGCATAGGTAGCCAC+TGG | 0.479534 | 3.1:+87714618 | None:intergenic |
GATAAGGGAGATGAAGCTAT+AGG | 0.479560 | 3.1:+87717220 | None:intergenic |
GAACATCCCTGAACTTGGTC+AGG | 0.480468 | 3.1:+87716332 | None:intergenic |
GATTGAAAATGCGGCATCAC+CGG | 0.492928 | 3.1:+87719714 | None:intergenic |
GGAGAAGAGCGAAACGACGC+TGG | 0.493971 | 3.1:-87719976 | MS.gene014656:CDS |
CGGAAACAAAGGAAGCTGAC+AGG | 0.494375 | 3.1:+87717197 | None:intergenic |
TGTTATATGGGTTCCAGAGA+TGG | 0.499612 | 3.1:+87717653 | None:intergenic |
TGAGGCTGTGATCTAGGGCT+AGG | 0.501431 | 3.1:+87718432 | None:intergenic |
CGACGCTGGATTTAGCTAAT+CGG | 0.509373 | 3.1:-87719962 | MS.gene014656:CDS |
AAAGGATGTCACTGCAAGAA+AGG | 0.510127 | 3.1:-87717864 | MS.gene014656:CDS |
TTGGATTTCGCCGCCGCATG+TGG | 0.510164 | 3.1:-87719924 | MS.gene014656:CDS |
CTTCCGGTTGTTCAATCCGC+AGG | 0.513069 | 3.1:+87714558 | None:intergenic |
ATCGAAACTAACTGCGGGCG+CGG | 0.513160 | 3.1:+87719690 | None:intergenic |
TCAAATTTCCAGAAATGAGA+GGG | 0.516415 | 3.1:-87716681 | MS.gene014656:intron |
CTGAAATTCAATTAATAGGA+AGG | 0.519135 | 3.1:-87717893 | MS.gene014656:CDS |
GCTTATCCTGACCAAGTTCA+GGG | 0.520596 | 3.1:-87716338 | MS.gene014656:CDS |
CAAAAGTCTTCCAACTCTGA+TGG | 0.520619 | 3.1:-87716391 | MS.gene014656:CDS |
ATGATTCTCCGAAACAGGCT+TGG | 0.524373 | 3.1:+87716573 | None:intergenic |
AAATGCATTTGCGCCGGAGG+AGG | 0.526333 | 3.1:+87719816 | None:intergenic |
GCTGCCATTAATGGAGCAGT+TGG | 0.529615 | 3.1:-87717687 | MS.gene014656:CDS |
CAGAGCAGAGGACGTTGGCA+TGG | 0.529760 | 3.1:+87717814 | None:intergenic |
AGTCACCAGTGAGACGGCCG+TGG | 0.538539 | 3.1:-87719785 | MS.gene014656:CDS |
CACCAAAGCTTCCGGTGAAG+AGG | 0.538599 | 3.1:-87719644 | MS.gene014656:CDS |
GAAGCTGCAAAGACAAATGC+AGG | 0.539292 | 3.1:-87716966 | MS.gene014656:intron |
TGTGACAGTGACTGCGGCGT+CGG | 0.541888 | 3.1:+87719873 | None:intergenic |
TGTGGTGGTGATTGTTTCCA+CGG | 0.542299 | 3.1:+87719768 | None:intergenic |
AGCGCTTGAAACCTCTTCAC+CGG | 0.544016 | 3.1:+87719633 | None:intergenic |
TTCATGTTGAAGGTCTGTGT+TGG | 0.547492 | 3.1:-87717051 | MS.gene014656:intron |
GGAAGCTTTGGTGTGGAGTA+CGG | 0.547715 | 3.1:+87719654 | None:intergenic |
TCCAAATGCATTTGCGCCGG+AGG | 0.550391 | 3.1:+87719813 | None:intergenic |
CTCTGCTGCTGCCACTGTGG+TGG | 0.557444 | 3.1:+87719753 | None:intergenic |
ACCGTCGGATTTGCCTCCTC+CGG | 0.560178 | 3.1:-87719829 | MS.gene014656:CDS |
GGAGGCAAATCCGACGGTGT+CGG | 0.562332 | 3.1:+87719834 | None:intergenic |
ATAGGCAGTGTCGGAAACAA+AGG | 0.562595 | 3.1:+87717186 | None:intergenic |
GAACAATGAGGCTGCCCGAA+AGG | 0.567258 | 3.1:-87718160 | MS.gene014656:CDS |
GAATCATCGAAACTAACTGC+GGG | 0.568372 | 3.1:+87719685 | None:intergenic |
TGCATAGGTAGCCACTGGGA+TGG | 0.569627 | 3.1:+87714623 | None:intergenic |
ATGTCCATTAGTTCTTGCAT+AGG | 0.570734 | 3.1:+87714608 | None:intergenic |
GATTTCGCCGCCGCATGTGG+AGG | 0.572850 | 3.1:-87719921 | MS.gene014656:CDS |
AAATGAGAGGGAAAGCTGCT+AGG | 0.574833 | 3.1:-87716669 | MS.gene014656:CDS |
CGGTGTCGGAGGTCGTAGAA+TGG | 0.576418 | 3.1:+87719848 | None:intergenic |
AGCAGTGTATCCATCAGAGT+TGG | 0.576661 | 3.1:+87716381 | None:intergenic |
TAGTCTAGTTCAAATCAGAC+AGG | 0.581100 | 3.1:-87717718 | MS.gene014656:CDS |
TTAAGTGTTTCTGGTGACAG+TGG | 0.589606 | 3.1:+87716502 | None:intergenic |
GGAGGCAATTGGAATGACAC+TGG | 0.589713 | 3.1:-87718139 | MS.gene014656:CDS |
GACAGTGACTGCGGCGTCGG+TGG | 0.593114 | 3.1:+87719876 | None:intergenic |
AAATCCAAATGCATTTGCGC+CGG | 0.594109 | 3.1:+87719810 | None:intergenic |
CTTCACCGGAAGCTTTGGTG+TGG | 0.594505 | 3.1:+87719647 | None:intergenic |
CAATGAGGCTGCCCGAAAGG+AGG | 0.594923 | 3.1:-87718157 | MS.gene014656:CDS |
CACAGCCTCAAAATAAAGCA+GGG | 0.602704 | 3.1:-87718419 | MS.gene014656:CDS |
GGAAACAAAGGAAGCTGACA+GGG | 0.605542 | 3.1:+87717198 | None:intergenic |
GGCAAATCCGACGGTGTCGG+AGG | 0.608094 | 3.1:+87719837 | None:intergenic |
TATATGGGTTCCAGAGATGG+AGG | 0.609649 | 3.1:+87717656 | None:intergenic |
GCAGCTGGGATCTATTGTGA+TGG | 0.610068 | 3.1:-87718213 | MS.gene014656:CDS |
GAGAACGTCACAGTCTCCGC+CGG | 0.610187 | 3.1:-87719733 | MS.gene014656:CDS |
GGGCGCGGTGATTGAAAATG+CGG | 0.613912 | 3.1:+87719705 | None:intergenic |
TCTTTCGTTGAGGTTGCCTG+CGG | 0.618808 | 3.1:-87714574 | MS.gene014656:CDS |
ACTGTGAGTGCTATGCAGCT+GGG | 0.620605 | 3.1:-87718227 | MS.gene014656:CDS |
TGATGTGTGATGAACAGGAT+GGG | 0.620967 | 3.1:-87716477 | MS.gene014656:CDS |
ATACTACTGATCTTTCGTTG+AGG | 0.630168 | 3.1:-87714584 | MS.gene014656:CDS |
TTCTTGCATAGGTAGCCACT+GGG | 0.635007 | 3.1:+87714619 | None:intergenic |
TCATAATAATCTGAACAATG+AGG | 0.638704 | 3.1:-87718172 | MS.gene014656:CDS |
TGAAAATGCGGCATCACCGG+CGG | 0.641386 | 3.1:+87719717 | None:intergenic |
GGCGACAATGTCAGGTACGA+CGG | 0.643457 | 3.1:+87719897 | None:intergenic |
GCCGGAGGAGGCAAATCCGA+CGG | 0.645977 | 3.1:+87719828 | None:intergenic |
TCACTCACAGATCAAACTGT+CGG | 0.650466 | 3.1:-87717591 | MS.gene014656:CDS |
ATATGGGTTCCAGAGATGGA+GGG | 0.670217 | 3.1:+87717657 | None:intergenic |
TCTACGACCTCCGACACCGT+CGG | 0.672076 | 3.1:-87719844 | MS.gene014656:CDS |
TTGATGTGTGATGAACAGGA+TGG | 0.672796 | 3.1:-87716478 | MS.gene014656:CDS |
GTTCTCTGCTGCTGCCACTG+TGG | 0.675511 | 3.1:+87719750 | None:intergenic |
TAGCTAATCGGAAATTTGCG+CGG | 0.681451 | 3.1:-87719950 | MS.gene014656:CDS |
CGACGGACCTCCACATGCGG+CGG | 0.682146 | 3.1:+87719914 | None:intergenic |
GTACGACGGACCTCCACATG+CGG | 0.684282 | 3.1:+87719911 | None:intergenic |
TGCCAATTGCTCCATCCCAG+TGG | 0.687073 | 3.1:-87714634 | MS.gene014656:CDS |
GATAGTGGTGCTGAAACTAA+GGG | 0.691174 | 3.1:-87714678 | MS.gene014656:CDS |
TGAATCATCGAAACTAACTG+CGG | 0.719757 | 3.1:+87719684 | None:intergenic |
ATGGTTTGTGACAGTGACTG+CGG | 0.730603 | 3.1:+87719867 | None:intergenic |
GGAAACAATCACCACCACAG+TGG | 0.761756 | 3.1:-87719764 | MS.gene014656:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATGAATATAAAAAAAAAC+CGG | - | chr3.1:87717461-87717480 | MS.gene014656:intron | 10.0% |
!! | TAAAAGATATTAATTACAAT+CGG | + | chr3.1:87717276-87717295 | None:intergenic | 10.0% |
!! | TTATAAAAACTAATAAGATT+TGG | + | chr3.1:87715891-87715910 | None:intergenic | 10.0% |
!!! | ATCTTATTAGTTTTTATAAA+AGG | - | chr3.1:87715892-87715911 | MS.gene014656:intron | 10.0% |
!!! | CTCTTTAAAATTTATAATTT+AGG | + | chr3.1:87719283-87719302 | None:intergenic | 10.0% |
!! | GACGATTAAATTAATAAAAA+TGG | - | chr3.1:87719447-87719466 | MS.gene014656:intron | 15.0% |
!! | TATTAATTTAATCGTCATTA+AGG | + | chr3.1:87719443-87719462 | None:intergenic | 15.0% |
!!! | AAAAAATTAAAGCTACTTTT+AGG | + | chr3.1:87719651-87719670 | None:intergenic | 15.0% |
!!! | AAAAATTAAAGCTACTTTTA+GGG | + | chr3.1:87719650-87719669 | None:intergenic | 15.0% |
!!! | AATGAATTATTGACTTAAAT+TGG | + | chr3.1:87715707-87715726 | None:intergenic | 15.0% |
!!! | AATGATCAGTATATTTTTAT+TGG | + | chr3.1:87715940-87715959 | None:intergenic | 15.0% |
!!! | ATATTGATAGCTAAATTAAT+AGG | + | chr3.1:87717230-87717249 | None:intergenic | 15.0% |
!!! | ATTTTAGTATTAGAAACATA+AGG | - | chr3.1:87715523-87715542 | MS.gene014656:intron | 15.0% |
!!! | TATTGATAGCTAAATTAATA+GGG | + | chr3.1:87717229-87717248 | None:intergenic | 15.0% |
!!! | TGTTGCATTTTATTTATTTT+TGG | - | chr3.1:87715024-87715043 | MS.gene014656:intron | 15.0% |
!! | AAATCAATGTGAAACTAATA+AGG | - | chr3.1:87717107-87717126 | MS.gene014656:intron | 20.0% |
!! | ACATGAAATATTGTTAATTC+CGG | + | chr3.1:87717483-87717502 | None:intergenic | 20.0% |
!! | ATAGATTTCTTGCTTTATAT+CGG | - | chr3.1:87718469-87718488 | MS.gene014656:intron | 20.0% |
!! | GAAAAATACTTGATTCAAAT+GGG | - | chr3.1:87718409-87718428 | MS.gene014656:CDS | 20.0% |
!! | TATAGTATCAATCAAACATA+TGG | + | chr3.1:87719604-87719623 | None:intergenic | 20.0% |
!! | TCAAAAACAAAGCAAAAAAA+TGG | + | chr3.1:87719115-87719134 | None:intergenic | 20.0% |
!! | TGAAAAATACTTGATTCAAA+TGG | - | chr3.1:87718408-87718427 | MS.gene014656:CDS | 20.0% |
!! | TGAGGAAATAAAAAAAATTC+AGG | + | chr3.1:87719569-87719588 | None:intergenic | 20.0% |
!! | TTAACAATATTTCATGTTGA+AGG | - | chr3.1:87717486-87717505 | MS.gene014656:intron | 20.0% |
!! | TTCTTAATATAGAAGTTTGA+TGG | + | chr3.1:87719732-87719751 | None:intergenic | 20.0% |
!! | TTGATATTGACATTCATAAT+AGG | - | chr3.1:87718022-87718041 | MS.gene014656:intron | 20.0% |
!!! | AGGTCTTGAAATTATTTTAT+AGG | + | chr3.1:87717382-87717401 | None:intergenic | 20.0% |
!!! | ATATTTTTATTGGCAAGTTT+AGG | + | chr3.1:87715930-87715949 | None:intergenic | 20.0% |
!!! | ATTATTATTGGTAGCATTAA+AGG | - | chr3.1:87718249-87718268 | MS.gene014656:intron | 20.0% |
!!! | CAAAGTTCTATTTTTAAACA+TGG | + | chr3.1:87715763-87715782 | None:intergenic | 20.0% |
!!! | CTGTCCATTTATATTTTATA+CGG | - | chr3.1:87715964-87715983 | MS.gene014656:intron | 20.0% |
!!! | GTGATTTTTTTTCAATCATT+AGG | - | chr3.1:87717414-87717433 | MS.gene014656:intron | 20.0% |
!!! | TGGTGTTTTTTTTTTTTTTG+TGG | + | chr3.1:87715165-87715184 | None:intergenic | 20.0% |
!!! | TTGTTAATGATTGCATTTTT+GGG | - | chr3.1:87715824-87715843 | MS.gene014656:intron | 20.0% |
!!! | TTTGTTAATGATTGCATTTT+TGG | - | chr3.1:87715823-87715842 | MS.gene014656:intron | 20.0% |
!!! | TTTTGATATCGATAATTTTG+AGG | + | chr3.1:87718927-87718946 | None:intergenic | 20.0% |
! | AAAACAATTACAATGTCAGT+CGG | + | chr3.1:87717846-87717865 | None:intergenic | 25.0% |
! | AAAATCACATACCTGAATTT+AGG | + | chr3.1:87717402-87717421 | None:intergenic | 25.0% |
! | AAACTTAACATCCTAAAAAG+AGG | + | chr3.1:87719140-87719159 | None:intergenic | 25.0% |
! | AAAGCAAGAAATCTATAGAT+GGG | + | chr3.1:87718465-87718484 | None:intergenic | 25.0% |
! | AAATAAAATGCAACACATTC+AGG | + | chr3.1:87715019-87715038 | None:intergenic | 25.0% |
! | AATAGAAGCTTCATATTTCT+CGG | + | chr3.1:87717914-87717933 | None:intergenic | 25.0% |
! | ATAGAAGTTTGATGGAATAA+AGG | + | chr3.1:87719724-87719743 | None:intergenic | 25.0% |
! | ATCAAATGTGTGAAAAAGTA+GGG | + | chr3.1:87717815-87717834 | None:intergenic | 25.0% |
! | ATCAGAAAACACTAGAATAT+AGG | + | chr3.1:87719490-87719509 | None:intergenic | 25.0% |
! | ATGATAAGAATGTTAGTGTA+TGG | - | chr3.1:87715295-87715314 | MS.gene014656:intron | 25.0% |
! | CTGAAATTCAATTAATAGGA+AGG | - | chr3.1:87716654-87716673 | MS.gene014656:CDS | 25.0% |
! | GTTTGTTCAAGACATTTAAA+TGG | + | chr3.1:87716620-87716639 | None:intergenic | 25.0% |
! | TAAAGCAAGAAATCTATAGA+TGG | + | chr3.1:87718466-87718485 | None:intergenic | 25.0% |
! | TAATTTCAAGACCTAAATTC+AGG | - | chr3.1:87717388-87717407 | MS.gene014656:intron | 25.0% |
! | TATAAATTTGCCACTAAACT+AGG | - | chr3.1:87715859-87715878 | MS.gene014656:intron | 25.0% |
! | TATTAGACAAAAAAGAGCTT+AGG | - | chr3.1:87718980-87718999 | MS.gene014656:intron | 25.0% |
! | TCATAATAATCTGAACAATG+AGG | - | chr3.1:87716375-87716394 | MS.gene014656:CDS | 25.0% |
! | TCTTTACATTAGTACTTATG+TGG | + | chr3.1:87715655-87715674 | None:intergenic | 25.0% |
! | TGTATGAAAAACTTTCATCA+AGG | - | chr3.1:87716235-87716254 | MS.gene014656:intron | 25.0% |
! | TTAAATATGTGATGTGATTG+AGG | - | chr3.1:87719223-87719242 | MS.gene014656:intron | 25.0% |
! | TTATCGATATCAAAACCTTT+AGG | - | chr3.1:87718932-87718951 | MS.gene014656:intron | 25.0% |
! | TTATTTAACATCAGTAACCT+GGG | - | chr3.1:87719669-87719688 | MS.gene014656:CDS | 25.0% |
! | TTTATTTAACATCAGTAACC+TGG | - | chr3.1:87719668-87719687 | MS.gene014656:CDS | 25.0% |
!! | AATTTGATGCATCTATTTTG+TGG | - | chr3.1:87717648-87717667 | MS.gene014656:CDS | 25.0% |
!! | AGATAAAACAGTCTTTTTGA+AGG | + | chr3.1:87715993-87716012 | None:intergenic | 25.0% |
!! | ATTGTTATAAAGAAAGTGCA+CGG | + | chr3.1:87716277-87716296 | None:intergenic | 25.0% |
!! | CAAATGGGTTTATATTAAAG+AGG | - | chr3.1:87718424-87718443 | MS.gene014656:CDS | 25.0% |
!! | CATAATTTAGAATGCAGAAT+TGG | - | chr3.1:87715476-87715495 | MS.gene014656:intron | 25.0% |
!! | GATAAAACAGTCTTTTTGAA+GGG | + | chr3.1:87715992-87716011 | None:intergenic | 25.0% |
!! | GCTAAAGTACTTACAATTTA+AGG | + | chr3.1:87716210-87716229 | None:intergenic | 25.0% |
!! | GTGTCTGAAATTCAATTAAT+AGG | - | chr3.1:87716650-87716669 | MS.gene014656:CDS | 25.0% |
!! | TACTTACAATTTAAGGCATT+TGG | + | chr3.1:87716203-87716222 | None:intergenic | 25.0% |
!!! | AACTAAGAAGTTGATAAATG+CGG | + | chr3.1:87717166-87717185 | None:intergenic | 25.0% |
!!! | AATTATTTTATAGGCAGTGT+CGG | + | chr3.1:87717373-87717392 | None:intergenic | 25.0% |
!!! | AGAACTTTTAAAGATATGGA+TGG | - | chr3.1:87715629-87715648 | MS.gene014656:intron | 25.0% |
!!! | ATAAAACAGTCTTTTTGAAG+GGG | + | chr3.1:87715991-87716010 | None:intergenic | 25.0% |
!!! | GATCTTTTTTATGATAGAGA+GGG | + | chr3.1:87718902-87718921 | None:intergenic | 25.0% |
!!! | TCTTTTATTTTTTCCCAGAA+TGG | - | chr3.1:87719534-87719553 | MS.gene014656:intron | 25.0% |
!!! | TGATCTTTTTTATGATAGAG+AGG | + | chr3.1:87718903-87718922 | None:intergenic | 25.0% |
!!! | TTGGAGAACTTTTAAAGATA+TGG | - | chr3.1:87715625-87715644 | MS.gene014656:intron | 25.0% |
!!! | TTTGCAATTTTGACATTGTT+GGG | - | chr3.1:87718301-87718320 | MS.gene014656:intron | 25.0% |
AAATTAATAGGGAAGTAGCA+AGG | + | chr3.1:87717218-87717237 | None:intergenic | 30.0% | |
AACACACTTAAAGAATACGA+AGG | + | chr3.1:87719411-87719430 | None:intergenic | 30.0% | |
AACACTCACAATACTTCTTA+AGG | + | chr3.1:87716712-87716731 | None:intergenic | 30.0% | |
AATGCAGAATTGGATGTATT+AGG | - | chr3.1:87715486-87715505 | MS.gene014656:intron | 30.0% | |
ATACAATGTATTGAGTGTGT+TGG | + | chr3.1:87719073-87719092 | None:intergenic | 30.0% | |
ATGCAATCATTAACAAACCT+CGG | + | chr3.1:87715820-87715839 | None:intergenic | 30.0% | |
ATGCAGAATTGGATGTATTA+GGG | - | chr3.1:87715487-87715506 | MS.gene014656:intron | 30.0% | |
ATGTATTAGGGATGTATGTT+TGG | - | chr3.1:87715499-87715518 | MS.gene014656:intron | 30.0% | |
ATTATAAACCCATACACAAG+TGG | - | chr3.1:87715070-87715089 | MS.gene014656:intron | 30.0% | |
CAACAATGTCAAAATTGCAA+AGG | + | chr3.1:87718302-87718321 | None:intergenic | 30.0% | |
CACATCAATTTAAGTGTTTC+TGG | + | chr3.1:87718057-87718076 | None:intergenic | 30.0% | |
CCAAACATAGTGAATTTGAA+TGG | + | chr3.1:87717082-87717101 | None:intergenic | 30.0% | |
CCATTCAAATTCACTATGTT+TGG | - | chr3.1:87717079-87717098 | MS.gene014656:intron | 30.0% | |
CTAATATAGAAAGATGTTCC+TGG | + | chr3.1:87718966-87718985 | None:intergenic | 30.0% | |
CTTGGTGAACTGATTATTAT+TGG | - | chr3.1:87718237-87718256 | MS.gene014656:intron | 30.0% | |
GAAGAAAATGGTGATAAGTA+TGG | - | chr3.1:87718803-87718822 | MS.gene014656:intron | 30.0% | |
GACAATGCATAATATATGCA+AGG | - | chr3.1:87715117-87715136 | MS.gene014656:intron | 30.0% | |
GAGAAAACACCTAAAAACAA+TGG | - | chr3.1:87719845-87719864 | MS.gene014656:CDS | 30.0% | |
GATCAAATGTGTGAAAAAGT+AGG | + | chr3.1:87717816-87717835 | None:intergenic | 30.0% | |
GCTTCTTTGCATTATTGATA+CGG | - | chr3.1:87717003-87717022 | MS.gene014656:CDS | 30.0% | |
GGGACCGTATAAAATATAAA+TGG | + | chr3.1:87715971-87715990 | None:intergenic | 30.0% | |
TAAATGTCTTGAACAAACTC+AGG | - | chr3.1:87716622-87716641 | MS.gene014656:CDS | 30.0% | |
TAAATTGATGTGTGATGAAC+AGG | - | chr3.1:87718065-87718084 | MS.gene014656:intron | 30.0% | |
TACAATGTATTGAGTGTGTT+GGG | + | chr3.1:87719072-87719091 | None:intergenic | 30.0% | |
TAGCTTCTATTTGAAGACAA+GGG | - | chr3.1:87715560-87715579 | MS.gene014656:intron | 30.0% | |
TAGTTACTCTTTCTGTTGTA+GGG | - | chr3.1:87717053-87717072 | MS.gene014656:intron | 30.0% | |
TCAAAATAAAGCAGGGTTAA+AGG | - | chr3.1:87716135-87716154 | MS.gene014656:intron | 30.0% | |
TCAAATGTGTGAAAAAGTAG+GGG | + | chr3.1:87717814-87717833 | None:intergenic | 30.0% | |
TCAAATTTCCAGAAATGAGA+GGG | - | chr3.1:87717866-87717885 | MS.gene014656:CDS | 30.0% | |
TCCTGTCTTAAATATACATG+TGG | - | chr3.1:87718344-87718363 | MS.gene014656:intron | 30.0% | |
TGAAATTAAGAACGTCAAGT+TGG | - | chr3.1:87718680-87718699 | MS.gene014656:intron | 30.0% | |
TTAATCGTCATTAAGGAGTA+AGG | + | chr3.1:87719436-87719455 | None:intergenic | 30.0% | |
TTAGCTTCTATTTGAAGACA+AGG | - | chr3.1:87715559-87715578 | MS.gene014656:intron | 30.0% | |
TTAGTTACTCTTTCTGTTGT+AGG | - | chr3.1:87717052-87717071 | MS.gene014656:intron | 30.0% | |
TTCAAATTTCCAGAAATGAG+AGG | - | chr3.1:87717865-87717884 | MS.gene014656:CDS | 30.0% | |
TTTCCACAACTGAAAAATCA+AGG | - | chr3.1:87719182-87719201 | MS.gene014656:intron | 30.0% | |
! | AAAATCCAGGAAAGTTTTTC+TGG | - | chr3.1:87716929-87716948 | MS.gene014656:intron | 30.0% |
! | ACACTCTAAAGAAGCAAAAA+CGG | - | chr3.1:87716161-87716180 | MS.gene014656:intron | 30.0% |
! | ACCACATGTATATTTAAGAC+AGG | + | chr3.1:87718348-87718367 | None:intergenic | 30.0% |
! | ATTGACTGCAAGAATTTTGA+AGG | - | chr3.1:87716770-87716789 | MS.gene014656:intron | 30.0% |
! | ATTTACAATTTTCAGAGCAG+AGG | + | chr3.1:87716748-87716767 | None:intergenic | 30.0% |
! | TAACAATTTCGGCATTTTGA+CGG | - | chr3.1:87715234-87715253 | MS.gene014656:intron | 30.0% |
! | TATTGGTAGCATTAAAGGTT+AGG | - | chr3.1:87718254-87718273 | MS.gene014656:intron | 30.0% |
! | TTAATAGGAAGGCACAATAA+AGG | - | chr3.1:87716665-87716684 | MS.gene014656:CDS | 30.0% |
! | TTTCCAAATTTTATGCTGCT+AGG | - | chr3.1:87717708-87717727 | MS.gene014656:CDS | 30.0% |
!! | ACTAAGAAGTTGATAAATGC+GGG | + | chr3.1:87717165-87717184 | None:intergenic | 30.0% |
!! | CGCTATCTTGAATTTTAATC+AGG | - | chr3.1:87717296-87717315 | MS.gene014656:intron | 30.0% |
!! | CTTTGCAATTTTGACATTGT+TGG | - | chr3.1:87718300-87718319 | MS.gene014656:intron | 30.0% |
!! | GGTGCTGTTAATAACTATTA+TGG | - | chr3.1:87716563-87716582 | MS.gene014656:CDS | 30.0% |
!! | TACTAATGTAAAGAGCATCA+GGG | - | chr3.1:87715661-87715680 | MS.gene014656:intron | 30.0% |
!! | TTGCAATTTTGACATTGTTG+GGG | - | chr3.1:87718302-87718321 | MS.gene014656:intron | 30.0% |
!! | TTTTTCAATCATTAGGTGAG+CGG | - | chr3.1:87717421-87717440 | MS.gene014656:intron | 30.0% |
!!! | ATAGAAACTTCTGGTTTTTG+CGG | + | chr3.1:87716475-87716494 | None:intergenic | 30.0% |
!!! | ATTTTTGGTCTGAAAGCATT+TGG | + | chr3.1:87716442-87716461 | None:intergenic | 30.0% |
!!! | CTGATATTTTAGCTTACTTG+TGG | - | chr3.1:87716592-87716611 | MS.gene014656:CDS | 30.0% |
!!! | TGTTTTTGAGACCTCTTTTT+AGG | - | chr3.1:87719126-87719145 | MS.gene014656:intron | 30.0% |
!!! | TTAGTTCTGTTTTAATCCCT+TGG | - | chr3.1:87717180-87717199 | MS.gene014656:CDS | 30.0% |
!!! | TTTAACCCTGCTTTATTTTG+AGG | + | chr3.1:87716136-87716155 | None:intergenic | 30.0% |
!!! | TTTTTTTTTTGTGGTGTTCG+AGG | + | chr3.1:87715156-87715175 | None:intergenic | 30.0% |
AAAAAGATTCTTGGCTCATG+AGG | + | chr3.1:87718527-87718546 | None:intergenic | 35.0% | |
AAAACACCATACACAAGTGA+AGG | - | chr3.1:87715176-87715195 | MS.gene014656:intron | 35.0% | |
AAGCGTAATGCATCATAAAG+AGG | + | chr3.1:87718610-87718629 | None:intergenic | 35.0% | |
ACGCCAACTATAAATACATG+AGG | + | chr3.1:87716520-87716539 | None:intergenic | 35.0% | |
AGAAATCTATAGATGGGTCA+CGG | + | chr3.1:87718459-87718478 | None:intergenic | 35.0% | |
ATACTACTGATCTTTCGTTG+AGG | - | chr3.1:87719963-87719982 | MS.gene014656:CDS | 35.0% | |
ATATGGCTAAAGATGAACTG+AGG | + | chr3.1:87719587-87719606 | None:intergenic | 35.0% | |
ATGTGAGTGAGACAAAAAGA+TGG | + | chr3.1:87718501-87718520 | None:intergenic | 35.0% | |
ATTTGCCAGAAAAACTTTCC+TGG | + | chr3.1:87716937-87716956 | None:intergenic | 35.0% | |
ATTTGTCTTTGCAGCTTCTT+TGG | + | chr3.1:87717579-87717598 | None:intergenic | 35.0% | |
CATTATTGATACGGTTTCGT+TGG | - | chr3.1:87717012-87717031 | MS.gene014656:CDS | 35.0% | |
CCTAAAAACAATGGTGATAG+TGG | - | chr3.1:87719854-87719873 | MS.gene014656:CDS | 35.0% | |
CCTAGGTAAAAGACTGTAAA+TGG | - | chr3.1:87718874-87718893 | MS.gene014656:intron | 35.0% | |
CGCCAACTATAAATACATGA+GGG | + | chr3.1:87716519-87716538 | None:intergenic | 35.0% | |
CTACTAACCATAGAAACTTC+TGG | + | chr3.1:87716484-87716503 | None:intergenic | 35.0% | |
CTCCCTCATGTATTTATAGT+TGG | - | chr3.1:87716514-87716533 | MS.gene014656:CDS | 35.0% | |
GCAAAAACCAGAAGTTTCTA+TGG | - | chr3.1:87716474-87716493 | MS.gene014656:CDS | 35.0% | |
GTCAAAATGCCGAAATTGTT+AGG | + | chr3.1:87715235-87715254 | None:intergenic | 35.0% | |
GTTGTTCGACCTAACAATTT+CGG | - | chr3.1:87715223-87715242 | MS.gene014656:intron | 35.0% | |
TAATTAACCACACGTTGTGT+TGG | - | chr3.1:87715370-87715389 | MS.gene014656:intron | 35.0% | |
TAGAAACATAAGGCTTATGC+TGG | - | chr3.1:87715533-87715552 | MS.gene014656:intron | 35.0% | |
TCACCATGCAAAAAGATTCT+TGG | + | chr3.1:87718536-87718555 | None:intergenic | 35.0% | |
TCTGAATCAAGAAGCAATTC+TGG | - | chr3.1:87718772-87718791 | MS.gene014656:intron | 35.0% | |
TGAATCATCGAAACTAACTG+CGG | + | chr3.1:87714866-87714885 | None:intergenic | 35.0% | |
TGCATCAGTGAGCTAAAATT+TGG | - | chr3.1:87716542-87716561 | MS.gene014656:CDS | 35.0% | |
TGTCCTAGCAGCATAAAATT+TGG | + | chr3.1:87717714-87717733 | None:intergenic | 35.0% | |
TTAAATGCAACACAATCCAC+AGG | + | chr3.1:87715271-87715290 | None:intergenic | 35.0% | |
TTCCTGGATAACTATCCTAA+AGG | + | chr3.1:87718950-87718969 | None:intergenic | 35.0% | |
! | AAGGAAATTGATGGTTCCAA+GGG | + | chr3.1:87717199-87717218 | None:intergenic | 35.0% |
! | AATCTTTTTGCATGGTGAGA+TGG | - | chr3.1:87718538-87718557 | MS.gene014656:intron | 35.0% |
! | ATCTTTTTGCATGGTGAGAT+GGG | - | chr3.1:87718539-87718558 | MS.gene014656:intron | 35.0% |
! | ATGTCCATTAGTTCTTGCAT+AGG | + | chr3.1:87719942-87719961 | None:intergenic | 35.0% |
! | CCATTTACAGTCTTTTACCT+AGG | + | chr3.1:87718877-87718896 | None:intergenic | 35.0% |
! | CTTATCACCATTTTCTTCCT+TGG | + | chr3.1:87718801-87718820 | None:intergenic | 35.0% |
! | GATTTTTCACATTCTGTGTC+TGG | + | chr3.1:87717532-87717551 | None:intergenic | 35.0% |
! | TAGCTAATTTTGCAACTGCA+AGG | - | chr3.1:87716296-87716315 | MS.gene014656:intron | 35.0% |
! | TAGTCTAGTTCAAATCAGAC+AGG | - | chr3.1:87716829-87716848 | MS.gene014656:intron | 35.0% |
! | TCCTGGATTTTTCTCTTCTT+GGG | + | chr3.1:87716920-87716939 | None:intergenic | 35.0% |
! | TCTCTTCTTGGGTGTTATAT+GGG | + | chr3.1:87716909-87716928 | None:intergenic | 35.0% |
! | TTCCTGGATTTTTCTCTTCT+TGG | + | chr3.1:87716921-87716940 | None:intergenic | 35.0% |
! | TTCTCTTCTTGGGTGTTATA+TGG | + | chr3.1:87716910-87716929 | None:intergenic | 35.0% |
! | TTGATGCATCTATTTTGTGG+TGG | - | chr3.1:87717651-87717670 | MS.gene014656:CDS | 35.0% |
!! | AACCTTTAGGATAGTTATCC+AGG | - | chr3.1:87718945-87718964 | MS.gene014656:intron | 35.0% |
!! | ATTTTGAAGGAAGTGACGAA+TGG | - | chr3.1:87716783-87716802 | MS.gene014656:intron | 35.0% |
!! | CCACTATCACCATTGTTTTT+AGG | + | chr3.1:87719857-87719876 | None:intergenic | 35.0% |
!! | CTAAGAAGTTGATAAATGCG+GGG | + | chr3.1:87717164-87717183 | None:intergenic | 35.0% |
!! | CTTCCTTGATTTTTCAGTTG+TGG | + | chr3.1:87719188-87719207 | None:intergenic | 35.0% |
!! | GTACTAATGTAAAGAGCATC+AGG | - | chr3.1:87715660-87715679 | MS.gene014656:intron | 35.0% |
!! | TGCAATTTTGACATTGTTGG+GGG | - | chr3.1:87718303-87718322 | MS.gene014656:intron | 35.0% |
!! | TTTTTCAGCTATGTCAAACG+AGG | + | chr3.1:87718395-87718414 | None:intergenic | 35.0% |
!!! | TATTTTGAGGCTGTGATCTA+GGG | + | chr3.1:87716123-87716142 | None:intergenic | 35.0% |
!!! | TTATTTTGAGGCTGTGATCT+AGG | + | chr3.1:87716124-87716143 | None:intergenic | 35.0% |
!!! | TTATTTTTTCCCAGAATGGC+TGG | - | chr3.1:87719538-87719557 | MS.gene014656:intron | 35.0% |
AAAGGATGTCACTGCAAGAA+AGG | - | chr3.1:87716683-87716702 | MS.gene014656:intron | 40.0% | |
AAATCCAAATGCATTTGCGC+CGG | + | chr3.1:87714740-87714759 | None:intergenic | 40.0% | |
AAGTCCAACTGCTCCATTAA+TGG | + | chr3.1:87716867-87716886 | None:intergenic | 40.0% | |
ACCCAAGAAGAGAAAAATCC+AGG | - | chr3.1:87716916-87716935 | MS.gene014656:intron | 40.0% | |
AGATTGCAGAAGCAGAAAGT+GGG | - | chr3.1:87719325-87719344 | MS.gene014656:intron | 40.0% | |
ATCATAAAGAGGCCAGGTAT+GGG | + | chr3.1:87718599-87718618 | None:intergenic | 40.0% | |
ATGTCTTGAACAAACTCAGG+AGG | - | chr3.1:87716625-87716644 | MS.gene014656:CDS | 40.0% | |
ATGTGTGAAAAAGTAGGGGA+CGG | + | chr3.1:87717810-87717829 | None:intergenic | 40.0% | |
ATTAATGGAGCAGTTGGACT+TGG | - | chr3.1:87716866-87716885 | MS.gene014656:intron | 40.0% | |
CAAAAGTCTTCCAACTCTGA+TGG | - | chr3.1:87718156-87718175 | MS.gene014656:CDS | 40.0% | |
CACAGCCTCAAAATAAAGCA+GGG | - | chr3.1:87716128-87716147 | MS.gene014656:intron | 40.0% | |
CACTGCTATGGGTGAATATA+TGG | + | chr3.1:87718724-87718743 | None:intergenic | 40.0% | |
GAAATCTATAGATGGGTCAC+GGG | + | chr3.1:87718458-87718477 | None:intergenic | 40.0% | |
GAATCATCGAAACTAACTGC+GGG | + | chr3.1:87714865-87714884 | None:intergenic | 40.0% | |
GATAAGGGAGATGAAGCTAT+AGG | + | chr3.1:87717330-87717349 | None:intergenic | 40.0% | |
GATGATGCTACAAAGTAAGC+TGG | + | chr3.1:87718650-87718669 | None:intergenic | 40.0% | |
GCAACTAATGCTGCCATTAA+TGG | - | chr3.1:87716851-87716870 | MS.gene014656:intron | 40.0% | |
GCTACCTATGCAAGAACTAA+TGG | - | chr3.1:87719935-87719954 | MS.gene014656:CDS | 40.0% | |
GGAAGTAGCAAGGAAATTGA+TGG | + | chr3.1:87717208-87717227 | None:intergenic | 40.0% | |
GTTGGGGGAAAAATTAACTC+AGG | - | chr3.1:87718318-87718337 | MS.gene014656:intron | 40.0% | |
TAATGCATCATAAAGAGGCC+AGG | + | chr3.1:87718605-87718624 | None:intergenic | 40.0% | |
TAGCTAATCGGAAATTTGCG+CGG | - | chr3.1:87714597-87714616 | MS.gene014656:CDS | 40.0% | |
TCACAGCCTCAAAATAAAGC+AGG | - | chr3.1:87716127-87716146 | MS.gene014656:intron | 40.0% | |
TCACTCACAGATCAAACTGT+CGG | - | chr3.1:87716956-87716975 | MS.gene014656:intron | 40.0% | |
TCATTCCAATTGCCTCCTTT+CGG | + | chr3.1:87716405-87716424 | None:intergenic | 40.0% | |
TCTGTTCTGTCTCTCTCTTT+GGG | - | chr3.1:87719366-87719385 | MS.gene014656:intron | 40.0% | |
TGATGTGTGATGAACAGGAT+GGG | - | chr3.1:87718070-87718089 | MS.gene014656:intron | 40.0% | |
TGTTATATGGGTTCCAGAGA+TGG | + | chr3.1:87716897-87716916 | None:intergenic | 40.0% | |
TGTTGATGCATATCGAACAC+CGG | - | chr3.1:87715393-87715412 | MS.gene014656:intron | 40.0% | |
TTCATGTTGAAGGTCTGTGT+TGG | - | chr3.1:87717496-87717515 | MS.gene014656:intron | 40.0% | |
TTGATGTGTGATGAACAGGA+TGG | - | chr3.1:87718069-87718088 | MS.gene014656:intron | 40.0% | |
TTTGCATGATTCTCCGAAAC+AGG | + | chr3.1:87717982-87718001 | None:intergenic | 40.0% | |
! | ATTTTCAGTCACCAGTGAGA+CGG | - | chr3.1:87714756-87714775 | MS.gene014656:intron | 40.0% |
! | CAAGGAAATTGATGGTTCCA+AGG | + | chr3.1:87717200-87717219 | None:intergenic | 40.0% |
! | CAAGGAAGCGCATTGTTATT+TGG | - | chr3.1:87719200-87719219 | MS.gene014656:intron | 40.0% |
! | GAACAGGATGGGATGTTTTT+CGG | - | chr3.1:87718081-87718100 | MS.gene014656:CDS | 40.0% |
! | GAGCCAAGAATCTTTTTGCA+TGG | - | chr3.1:87718530-87718549 | MS.gene014656:intron | 40.0% |
! | GATAGTGGTGCTGAAACTAA+GGG | - | chr3.1:87719869-87719888 | MS.gene014656:CDS | 40.0% |
! | TGTGCGAAAAGCATGATTCT+TGG | - | chr3.1:87715606-87715625 | MS.gene014656:intron | 40.0% |
! | TTCGGTAATGGTTCTGCAAA+TGG | - | chr3.1:87718099-87718118 | MS.gene014656:CDS | 40.0% |
! | TTGGTGATTGCCTAGTTTAG+TGG | + | chr3.1:87715872-87715891 | None:intergenic | 40.0% |
! | TTTTCACATTCTGTGTCTGG+AGG | + | chr3.1:87717529-87717548 | None:intergenic | 40.0% |
!! | GATGGGATGTTTTTCGGTAA+TGG | - | chr3.1:87718087-87718106 | MS.gene014656:CDS | 40.0% |
!! | TAATGCAAAGAAGCACCTGT+TGG | + | chr3.1:87716997-87717016 | None:intergenic | 40.0% |
!! | TGATAGTGGTGCTGAAACTA+AGG | - | chr3.1:87719868-87719887 | MS.gene014656:CDS | 40.0% |
!! | TTAAGTGTTTCTGGTGACAG+TGG | + | chr3.1:87718048-87718067 | None:intergenic | 40.0% |
!!! | TGCAGGTTTTGACTAACACA+TGG | - | chr3.1:87717598-87717617 | MS.gene014656:CDS | 40.0% |
AAAGGAAGCTGACAGGGATA+AGG | + | chr3.1:87717346-87717365 | None:intergenic | 45.0% | |
AAATGAGAGGGAAAGCTGCT+AGG | - | chr3.1:87717878-87717897 | MS.gene014656:CDS | 45.0% | |
AAGGAAGCTGACAGGGATAA+GGG | + | chr3.1:87717345-87717364 | None:intergenic | 45.0% | |
ACAACAAGGTGACACTGCTA+TGG | + | chr3.1:87718736-87718755 | None:intergenic | 45.0% | |
ACCAAGAACATCCCTGAACT+TGG | + | chr3.1:87718223-87718242 | None:intergenic | 45.0% | |
ACCAAGTTCAGGGATGTTCT+TGG | - | chr3.1:87718219-87718238 | MS.gene014656:CDS | 45.0% | |
AGAAGCAATTCTGGTCACCA+AGG | - | chr3.1:87718781-87718800 | MS.gene014656:intron | 45.0% | |
AGATGTTGCCAAGCCTGTTT+CGG | - | chr3.1:87717966-87717985 | MS.gene014656:intron | 45.0% | |
AGCAGTGTATCCATCAGAGT+TGG | + | chr3.1:87718169-87718188 | None:intergenic | 45.0% | |
ATATGGGTTCCAGAGATGGA+GGG | + | chr3.1:87716893-87716912 | None:intergenic | 45.0% | |
ATCAACACCAACACAACGTG+TGG | + | chr3.1:87715380-87715399 | None:intergenic | 45.0% | |
ATGATTCTCCGAAACAGGCT+TGG | + | chr3.1:87717977-87717996 | None:intergenic | 45.0% | |
CAACAAGGTGACACTGCTAT+GGG | + | chr3.1:87718735-87718754 | None:intergenic | 45.0% | |
CACTTTCTGCTTCTGCAATC+TGG | + | chr3.1:87719326-87719345 | None:intergenic | 45.0% | |
CAGATTGCAGAAGCAGAAAG+TGG | - | chr3.1:87719324-87719343 | MS.gene014656:intron | 45.0% | |
CATCATAAAGAGGCCAGGTA+TGG | + | chr3.1:87718600-87718619 | None:intergenic | 45.0% | |
CATTATTCTTGCAGTTGCCC+AGG | + | chr3.1:87719689-87719708 | None:intergenic | 45.0% | |
CATTCCAATTGCCTCCTTTC+GGG | + | chr3.1:87716404-87716423 | None:intergenic | 45.0% | |
CCAACACCTTCACTTGTGTA+TGG | + | chr3.1:87715185-87715204 | None:intergenic | 45.0% | |
CCTTACCAAAGCTAAGCTCA+CGG | + | chr3.1:87715098-87715117 | None:intergenic | 45.0% | |
CGACGCTGGATTTAGCTAAT+CGG | - | chr3.1:87714585-87714604 | MS.gene014656:CDS | 45.0% | |
CTCTGTTCTGTCTCTCTCTT+TGG | - | chr3.1:87719365-87719384 | MS.gene014656:intron | 45.0% | |
CTGGTCACCAAGGAAGAAAA+TGG | - | chr3.1:87718791-87718810 | MS.gene014656:intron | 45.0% | |
CTGTTCTGTCTCTCTCTTTG+GGG | - | chr3.1:87719367-87719386 | MS.gene014656:intron | 45.0% | |
CTGTTTATGCAGAGCAGGAA+AGG | - | chr3.1:87718187-87718206 | MS.gene014656:CDS | 45.0% | |
CTTACCAAAGCTAAGCTCAC+GGG | + | chr3.1:87715097-87715116 | None:intergenic | 45.0% | |
GAAGCTGCAAAGACAAATGC+AGG | - | chr3.1:87717581-87717600 | MS.gene014656:CDS | 45.0% | |
GATTGAAAATGCGGCATCAC+CGG | + | chr3.1:87714836-87714855 | None:intergenic | 45.0% | |
GCTTATCCTGACCAAGTTCA+GGG | - | chr3.1:87718209-87718228 | MS.gene014656:CDS | 45.0% | |
GGAAACAAAGGAAGCTGACA+GGG | + | chr3.1:87717352-87717371 | None:intergenic | 45.0% | |
GTTAGGTCGAACAACATGAC+CGG | + | chr3.1:87715218-87715237 | None:intergenic | 45.0% | |
TAAGCCGATGCATGACAACA+AGG | + | chr3.1:87718750-87718769 | None:intergenic | 45.0% | |
TACAATCGGATGTCAGAGCA+TGG | + | chr3.1:87717262-87717281 | None:intergenic | 45.0% | |
TATATGGGTTCCAGAGATGG+AGG | + | chr3.1:87716894-87716913 | None:intergenic | 45.0% | |
TGTGTGAAAAAGTAGGGGAC+GGG | + | chr3.1:87717809-87717828 | None:intergenic | 45.0% | |
TTACCAAAGCTAAGCTCACG+GGG | + | chr3.1:87715096-87715115 | None:intergenic | 45.0% | |
TTAGGTCGAACAACATGACC+GGG | + | chr3.1:87715217-87715236 | None:intergenic | 45.0% | |
TTCTTGCATAGGTAGCCACT+GGG | + | chr3.1:87719931-87719950 | None:intergenic | 45.0% | |
! | ATAGGCAGTGTCGGAAACAA+AGG | + | chr3.1:87717364-87717383 | None:intergenic | 45.0% |
! | ATGGTTTGTGACAGTGACTG+CGG | + | chr3.1:87714683-87714702 | None:intergenic | 45.0% |
! | ATTTTCAGAGCAGAGGACGT+TGG | + | chr3.1:87716741-87716760 | None:intergenic | 45.0% |
! | CCATACACAAGTGAAGGTGT+TGG | - | chr3.1:87715182-87715201 | MS.gene014656:intron | 45.0% |
! | CTCCATACGAAAAGTGTGTC+CGG | + | chr3.1:87715415-87715434 | None:intergenic | 45.0% |
! | GTCACCTTGTTGTCATGCAT+CGG | - | chr3.1:87718743-87718762 | MS.gene014656:intron | 45.0% |
! | TGTGGTGGTGATTGTTTCCA+CGG | + | chr3.1:87714782-87714801 | None:intergenic | 45.0% |
!! | TGCGGACTGCTTGCAATTTT+TGG | + | chr3.1:87716457-87716476 | None:intergenic | 45.0% |
!! | TGGGCATATTGATTCAGCTG+AGG | - | chr3.1:87718558-87718577 | MS.gene014656:intron | 45.0% |
!!! | TTTTTTCCCAGAATGGCTGG+TGG | - | chr3.1:87719541-87719560 | MS.gene014656:intron | 45.0% |
!!! | TCTTTAAAATTTATAATTTA+GGG | + | chr3.1:87719282-87719301 | None:intergenic | 5.0% |
AACCTCTTCACCGGAAGCTT+TGG | + | chr3.1:87714908-87714927 | None:intergenic | 50.0% | |
ACTGTGAGTGCTATGCAGCT+GGG | - | chr3.1:87716320-87716339 | MS.gene014656:CDS | 50.0% | |
AGCGCTTGAAACCTCTTCAC+CGG | + | chr3.1:87714917-87714936 | None:intergenic | 50.0% | |
CATGACTGCTCAACACCAAC+AGG | - | chr3.1:87716979-87716998 | MS.gene014656:CDS | 50.0% | |
CCAGGTATGGGTGTACTACA+TGG | + | chr3.1:87718587-87718606 | None:intergenic | 50.0% | |
CCATGTAGTACACCCATACC+TGG | - | chr3.1:87718584-87718603 | MS.gene014656:intron | 50.0% | |
CGGAAACAAAGGAAGCTGAC+AGG | + | chr3.1:87717353-87717372 | None:intergenic | 50.0% | |
GAACATCCCTGAACTTGGTC+AGG | + | chr3.1:87718218-87718237 | None:intergenic | 50.0% | |
GAGCATCAGGGATGAAAGTC+TGG | - | chr3.1:87715673-87715692 | MS.gene014656:intron | 50.0% | |
GCAATCTGAGCATCATTCCG+AGG | - | chr3.1:87715800-87715819 | MS.gene014656:intron | 50.0% | |
GCAGCTGGGATCTATTGTGA+TGG | - | chr3.1:87716334-87716353 | MS.gene014656:CDS | 50.0% | |
GCAGCTTTCCCTCTCATTTC+TGG | + | chr3.1:87717877-87717896 | None:intergenic | 50.0% | |
GCTAGGAGACTCGTTTCTGA+AGG | + | chr3.1:87716101-87716120 | None:intergenic | 50.0% | |
GCTGCCATTAATGGAGCAGT+TGG | - | chr3.1:87716860-87716879 | MS.gene014656:intron | 50.0% | |
GGAAACAATCACCACCACAG+TGG | - | chr3.1:87714783-87714802 | MS.gene014656:intron | 50.0% | |
GGAGGCAATTGGAATGACAC+TGG | - | chr3.1:87716408-87716427 | MS.gene014656:CDS | 50.0% | |
GGCTTATCCTGACCAAGTTC+AGG | - | chr3.1:87718208-87718227 | MS.gene014656:CDS | 50.0% | |
GTACTCCACACCAAAGCTTC+CGG | - | chr3.1:87714895-87714914 | MS.gene014656:intron | 50.0% | |
GTTCTTGCATAGGTAGCCAC+TGG | + | chr3.1:87719932-87719951 | None:intergenic | 50.0% | |
TACTGTGAGTGCTATGCAGC+TGG | - | chr3.1:87716319-87716338 | MS.gene014656:CDS | 50.0% | |
TAGGTCGAACAACATGACCG+GGG | + | chr3.1:87715216-87715235 | None:intergenic | 50.0% | |
TCGGAAATTTGCGCGGCAAT+TGG | - | chr3.1:87714604-87714623 | MS.gene014656:CDS | 50.0% | |
TCTTTCGTTGAGGTTGCCTG+CGG | - | chr3.1:87719973-87719992 | MS.gene014656:CDS | 50.0% | |
! | CACCGGACACACTTTTCGTA+TGG | - | chr3.1:87715410-87715429 | MS.gene014656:intron | 50.0% |
! | CACTGCTGTTTATGCAGAGC+AGG | - | chr3.1:87718182-87718201 | MS.gene014656:CDS | 50.0% |
! | GGAAGCTTTGGTGTGGAGTA+CGG | + | chr3.1:87714896-87714915 | None:intergenic | 50.0% |
!! | CCGTGAGCTTAGCTTTGGTA+AGG | - | chr3.1:87715095-87715114 | MS.gene014656:intron | 50.0% |
!! | GGCATTTTGACGGTTGAGCT+AGG | - | chr3.1:87715244-87715263 | MS.gene014656:intron | 50.0% |
AAATGCATTTGCGCCGGAGG+AGG | + | chr3.1:87714734-87714753 | None:intergenic | 55.0% | |
AGCCACTGGGATGGAGCAAT+TGG | + | chr3.1:87719918-87719937 | None:intergenic | 55.0% | |
ATCGAAACTAACTGCGGGCG+CGG | + | chr3.1:87714860-87714879 | None:intergenic | 55.0% | |
CACCAAAGCTTCCGGTGAAG+AGG | - | chr3.1:87714903-87714922 | MS.gene014656:intron | 55.0% | |
CAGGAACCACCAGCCATTCT+GGG | + | chr3.1:87719550-87719569 | None:intergenic | 55.0% | |
GAACAATGAGGCTGCCCGAA+AGG | - | chr3.1:87716387-87716406 | MS.gene014656:CDS | 55.0% | |
GGCGACAATGTCAGGTACGA+CGG | + | chr3.1:87714653-87714672 | None:intergenic | 55.0% | |
GGGCGCGGTGATTGAAAATG+CGG | + | chr3.1:87714845-87714864 | None:intergenic | 55.0% | |
GGTGTTCGAGGTTCGACACT+CGG | + | chr3.1:87715144-87715163 | None:intergenic | 55.0% | |
TCACGGGGCCACTTGTGTAT+GGG | + | chr3.1:87715081-87715100 | None:intergenic | 55.0% | |
TCAGGAACCACCAGCCATTC+TGG | + | chr3.1:87719551-87719570 | None:intergenic | 55.0% | |
TCCAAATGCATTTGCGCCGG+AGG | + | chr3.1:87714737-87714756 | None:intergenic | 55.0% | |
TCCTCCGGCGCAAATGCATT+TGG | - | chr3.1:87714733-87714752 | MS.gene014656:CDS | 55.0% | |
TGAAAATGCGGCATCACCGG+CGG | + | chr3.1:87714833-87714852 | None:intergenic | 55.0% | |
TGCATAGGTAGCCACTGGGA+TGG | + | chr3.1:87719927-87719946 | None:intergenic | 55.0% | |
TGCCAATTGCTCCATCCCAG+TGG | - | chr3.1:87719913-87719932 | MS.gene014656:CDS | 55.0% | |
! | CTTCACCGGAAGCTTTGGTG+TGG | + | chr3.1:87714903-87714922 | None:intergenic | 55.0% |
! | TGAGGCTGTGATCTAGGGCT+AGG | + | chr3.1:87716118-87716137 | None:intergenic | 55.0% |
!! | AGGTGTTGGTGTTCGAACCC+CGG | - | chr3.1:87715196-87715215 | MS.gene014656:intron | 55.0% |
ACCGTCGGATTTGCCTCCTC+CGG | - | chr3.1:87714718-87714737 | MS.gene014656:CDS | 60.0% | |
CAATGAGGCTGCCCGAAAGG+AGG | - | chr3.1:87716390-87716409 | MS.gene014656:CDS | 60.0% | |
CAGAGCAGAGGACGTTGGCA+TGG | + | chr3.1:87716736-87716755 | None:intergenic | 60.0% | |
CTCACGGGGCCACTTGTGTA+TGG | + | chr3.1:87715082-87715101 | None:intergenic | 60.0% | |
GACGGTTGAGCTAGGACCTG+TGG | - | chr3.1:87715252-87715271 | MS.gene014656:intron | 60.0% | |
GAGAACGTCACAGTCTCCGC+CGG | - | chr3.1:87714814-87714833 | MS.gene014656:intron | 60.0% | |
GCTGCCCGAAAGGAGGCAAT+TGG | - | chr3.1:87716397-87716416 | MS.gene014656:CDS | 60.0% | |
GGACTTGGACCCTCCATCTC+TGG | - | chr3.1:87716881-87716900 | MS.gene014656:intron | 60.0% | |
GGAGAAGAGCGAAACGACGC+TGG | - | chr3.1:87714571-87714590 | MS.gene014656:CDS | 60.0% | |
GGAGGCAAATCCGACGGTGT+CGG | + | chr3.1:87714716-87714735 | None:intergenic | 60.0% | |
GTACGACGGACCTCCACATG+CGG | + | chr3.1:87714639-87714658 | None:intergenic | 60.0% | |
GTTCTCTGCTGCTGCCACTG+TGG | + | chr3.1:87714800-87714819 | None:intergenic | 60.0% | |
TCTACGACCTCCGACACCGT+CGG | - | chr3.1:87714703-87714722 | MS.gene014656:CDS | 60.0% | |
TGGCCCCGTGAGCTTAGCTT+TGG | - | chr3.1:87715090-87715109 | MS.gene014656:intron | 60.0% | |
TGTGACAGTGACTGCGGCGT+CGG | + | chr3.1:87714677-87714696 | None:intergenic | 60.0% | |
TGTTTCCACGGCCGTCTCAC+TGG | + | chr3.1:87714770-87714789 | None:intergenic | 60.0% | |
TTGGATTTCGCCGCCGCATG+TGG | - | chr3.1:87714623-87714642 | MS.gene014656:CDS | 60.0% | |
! | CGGTGTCGGAGGTCGTAGAA+TGG | + | chr3.1:87714702-87714721 | None:intergenic | 60.0% |
AGTCACCAGTGAGACGGCCG+TGG | - | chr3.1:87714762-87714781 | MS.gene014656:intron | 65.0% | |
CTCTGCTGCTGCCACTGTGG+TGG | + | chr3.1:87714797-87714816 | None:intergenic | 65.0% | |
GATTTCGCCGCCGCATGTGG+AGG | - | chr3.1:87714626-87714645 | MS.gene014656:CDS | 65.0% | |
GCCGGAGGAGGCAAATCCGA+CGG | + | chr3.1:87714722-87714741 | None:intergenic | 65.0% | |
! | GCGTCGGTGGCGACAATGTC+AGG | + | chr3.1:87714661-87714680 | None:intergenic | 65.0% |
! | GGCAAATCCGACGGTGTCGG+AGG | + | chr3.1:87714713-87714732 | None:intergenic | 65.0% |
CGACGGACCTCCACATGCGG+CGG | + | chr3.1:87714636-87714655 | None:intergenic | 70.0% | |
! | GACAGTGACTGCGGCGTCGG+TGG | + | chr3.1:87714674-87714693 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.1 | gene | 87714569 | 87720000 | 87714569 | ID=MS.gene014656 |
chr3.1 | mRNA | 87714569 | 87720000 | 87714569 | ID=MS.gene014656.t1;Parent=MS.gene014656 |
chr3.1 | exon | 87719633 | 87720000 | 87719633 | ID=MS.gene014656.t1.exon1;Parent=MS.gene014656.t1 |
chr3.1 | CDS | 87719633 | 87720000 | 87719633 | ID=cds.MS.gene014656.t1;Parent=MS.gene014656.t1 |
chr3.1 | exon | 87718354 | 87718464 | 87718354 | ID=MS.gene014656.t1.exon2;Parent=MS.gene014656.t1 |
chr3.1 | CDS | 87718354 | 87718464 | 87718354 | ID=cds.MS.gene014656.t1;Parent=MS.gene014656.t1 |
chr3.1 | exon | 87718074 | 87718251 | 87718074 | ID=MS.gene014656.t1.exon3;Parent=MS.gene014656.t1 |
chr3.1 | CDS | 87718074 | 87718251 | 87718074 | ID=cds.MS.gene014656.t1;Parent=MS.gene014656.t1 |
chr3.1 | exon | 87717569 | 87717925 | 87717569 | ID=MS.gene014656.t1.exon4;Parent=MS.gene014656.t1 |
chr3.1 | CDS | 87717569 | 87717925 | 87717569 | ID=cds.MS.gene014656.t1;Parent=MS.gene014656.t1 |
chr3.1 | exon | 87717160 | 87717251 | 87717160 | ID=MS.gene014656.t1.exon5;Parent=MS.gene014656.t1 |
chr3.1 | CDS | 87717160 | 87717251 | 87717160 | ID=cds.MS.gene014656.t1;Parent=MS.gene014656.t1 |
chr3.1 | exon | 87716967 | 87717061 | 87716967 | ID=MS.gene014656.t1.exon6;Parent=MS.gene014656.t1 |
chr3.1 | CDS | 87716967 | 87717061 | 87716967 | ID=cds.MS.gene014656.t1;Parent=MS.gene014656.t1 |
chr3.1 | exon | 87716299 | 87716691 | 87716299 | ID=MS.gene014656.t1.exon7;Parent=MS.gene014656.t1 |
chr3.1 | CDS | 87716299 | 87716691 | 87716299 | ID=cds.MS.gene014656.t1;Parent=MS.gene014656.t1 |
chr3.1 | exon | 87714569 | 87714765 | 87714569 | ID=MS.gene014656.t1.exon8;Parent=MS.gene014656.t1 |
chr3.1 | CDS | 87714569 | 87714765 | 87714569 | ID=cds.MS.gene014656.t1;Parent=MS.gene014656.t1 |
Gene Sequence |
Protein sequence |