AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene014787

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene014787.t1 MTR_3g107960 96.186 1206 46 0 1 1206 1 1206 0.0 2394
MS.gene014787.t1 MTR_3g101100 74.528 954 174 7 319 1206 445 1395 0.0 1436
MS.gene014787.t1 MTR_3g101100 42.292 506 210 10 1 461 1 469 1.91e-96 338
MS.gene014787.t1 MTR_5g085310 65.923 986 211 11 240 1190 130 1025 0.0 1273
MS.gene014787.t1 MTR_5g085310 62.281 114 30 2 1 114 1 101 2.21e-32 137
MS.gene014787.t1 MTR_6g017010 69.693 815 173 11 388 1199 22 765 0.0 1146
MS.gene014787.t1 MTR_6g017000 50.627 1037 399 21 15 1029 2 947 0.0 952
MS.gene014787.t1 MTR_4g005050 48.039 816 391 10 403 1198 893 1695 0.0 787
MS.gene014787.t1 MTR_5g017020 63.575 593 123 7 542 1125 17 525 0.0 718
MS.gene014787.t1 MTR_5g017020 58.185 672 146 9 542 1206 17 560 0.0 718
MS.gene014787.t1 MTR_6g017140 63.505 485 141 4 516 997 2 453 0.0 640
MS.gene014787.t1 MTR_0299s0030 54.132 242 53 5 829 1021 67 299 5.21e-67 230
MS.gene014787.t1 MTR_6g017120 86.170 94 12 1 719 812 8 100 3.97e-51 177
MS.gene014787.t1 MTR_1g047930 80.556 108 16 1 630 737 272 374 1.28e-48 178
MS.gene014787.t1 MTR_1g047930 43.902 205 59 4 352 500 70 274 2.60e-38 148
MS.gene014787.t1 MTR_6g017135 90.805 87 7 1 664 749 15 101 2.49e-48 169
MS.gene014787.t1 MTR_5g085317 68.687 99 26 2 802 900 1 94 1.58e-36 134
MS.gene014787.t1 MTR_6g017130 59.483 116 29 4 943 1053 249 351 7.57e-32 129
MS.gene014787.t1 MTR_6g017130 62.791 86 27 2 1104 1188 309 390 7.55e-24 105
MS.gene014787.t1 MTR_6g016945 34.386 285 127 8 285 551 6 248 9.33e-27 112
MS.gene014787.t1 MTR_1g047940 55.238 105 23 1 1092 1196 118 198 1.38e-26 108
MS.gene014787.t1 MTR_1g047940 58.571 70 24 1 798 867 4 68 2.01e-19 88.2
MS.gene014787.t1 MTR_5g015680 40.741 81 46 2 1119 1198 184 263 3.39e-12 68.9
MS.gene014787.t1 MTR_5g015680 40.741 81 46 2 1119 1198 279 358 6.03e-12 69.3
MS.gene014787.t1 MTR_5g015680 40.741 81 46 2 1119 1198 318 397 8.52e-12 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene014787.t1 AT1G79000 46.420 866 420 12 363 1198 808 1659 0.0 800
MS.gene014787.t1 AT1G79000 46.420 866 420 12 363 1198 832 1683 0.0 800
MS.gene014787.t1 AT1G79000 46.420 866 420 12 363 1198 832 1683 0.0 799
MS.gene014787.t1 AT1G16710 47.741 819 393 10 400 1198 889 1692 0.0 784
MS.gene014787.t1 AT1G16710 47.741 819 393 10 400 1198 863 1666 0.0 784
MS.gene014787.t1 AT1G16710 47.741 819 393 10 400 1198 863 1666 0.0 784
MS.gene014787.t1 AT1G16710 47.741 819 393 10 400 1198 860 1663 0.0 784
MS.gene014787.t1 AT1G16710 47.741 819 393 10 400 1198 863 1666 0.0 784
MS.gene014787.t1 AT1G16710 47.741 819 393 10 400 1198 863 1666 0.0 784
MS.gene014787.t1 AT1G16710 47.741 819 393 10 400 1198 824 1627 0.0 783
MS.gene014787.t1 AT1G16710 47.741 819 393 10 400 1198 824 1627 0.0 783
MS.gene014787.t1 AT1G16710 47.741 819 393 10 400 1198 824 1627 0.0 783
MS.gene014787.t1 AT3G12980 47.029 791 384 12 425 1198 883 1655 0.0 754
MS.gene014787.t1 AT3G12980 47.029 791 384 12 425 1198 802 1574 0.0 754
MS.gene014787.t1 AT1G55970 43.056 792 422 10 425 1198 677 1457 0.0 663
MS.gene014787.t1 AT1G55970 43.434 792 405 12 425 1198 677 1443 0.0 659
MS.gene014787.t1 AT1G67220 42.199 782 399 20 427 1179 604 1361 0.0 612
MS.gene014787.t1 AT1G16710 50.089 561 266 5 400 951 863 1418 0.0 580
MS.gene014787.t1 AT5G67480 42.308 78 43 2 1117 1192 271 348 5.00e-12 69.7
MS.gene014787.t1 AT5G67480 42.308 78 43 2 1117 1192 271 348 5.00e-12 69.7
MS.gene014787.t1 AT5G67480 42.308 78 43 2 1117 1192 282 359 5.28e-12 69.7

Find 239 sgRNAs with CRISPR-Local

Find 363 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAGCCTCAATTATTGTATT+TGG 0.083119 3.1:-85725463 None:intergenic
TTCTTTGTTCCTACTGAAAA+AGG 0.108559 3.1:+85727574 MS.gene014787:CDS
CCGAACTTGGTGGGAATATT+TGG 0.143159 3.1:+85723814 MS.gene014787:CDS
TTACCAAAAGCTGCTAATTT+TGG 0.160765 3.1:+85726435 MS.gene014787:CDS
TCAACACCACTATGTCAATT+TGG 0.177074 3.1:+85728777 MS.gene014787:CDS
GAAAGTGAATAAGCTGTTTC+TGG 0.192097 3.1:+85726737 MS.gene014787:CDS
CACTGAATGCAAGAAATTTC+AGG 0.225944 3.1:+85728112 MS.gene014787:CDS
CAGCCTCAATTATTGTATTT+GGG 0.232255 3.1:-85725462 None:intergenic
GGCAGGTCATGAAGAATAAA+AGG 0.233672 3.1:-85724425 None:intergenic
CCCTGGTAGGCAATATCTTT+TGG 0.238306 3.1:-85728010 None:intergenic
CCAGAGTAGGGTTGTTTAAA+TGG 0.239132 3.1:-85728584 None:intergenic
AGAGTGGATTATTTGAAAAT+AGG 0.257666 3.1:+85728475 MS.gene014787:CDS
TGACGGTTGTATGTCATTTC+GGG 0.258908 3.1:-85723960 None:intergenic
TTCCGAGTCTTTGCAATTCC+TGG 0.259668 3.1:-85729096 None:intergenic
AACTCATAGACTCGTTATTC+TGG 0.278374 3.1:-85724802 None:intergenic
GTGACGGTTGTATGTCATTT+CGG 0.290972 3.1:-85723961 None:intergenic
TTTGAGTCAACTTGTGTTCA+TGG 0.292920 3.1:-85728728 None:intergenic
GCACCAAAATTAGCAGCTTT+TGG 0.293044 3.1:-85726438 None:intergenic
GTCAAAACAGAGAGATTGTT+TGG 0.293545 3.1:+85724772 MS.gene014787:CDS
ATGGTCTTTAAAGCTCTATT+TGG 0.306293 3.1:-85727730 None:intergenic
CTACAACAACAAAAGAGATT+TGG 0.312602 3.1:+85726344 MS.gene014787:CDS
GGAATGTACGCCCAGGAGTT+TGG 0.314869 3.1:+85726960 MS.gene014787:CDS
ACAACTGATGAAGAATTTCT+TGG 0.316401 3.1:-85723846 None:intergenic
CTTTGTTTACCATGAGATAT+TGG 0.319700 3.1:+85727091 MS.gene014787:CDS
TCTGATGCCGCTGGTTATTA+TGG 0.320032 3.1:+85724377 MS.gene014787:CDS
ATATCCGCTGAAACAAGTTT+AGG 0.321167 3.1:-85724878 None:intergenic
ACTTGTTTCAGCGGATATTT+CGG 0.322049 3.1:+85724883 MS.gene014787:CDS
CCACTCTTTGTTCTTCTCTC+AGG 0.324213 3.1:-85727053 None:intergenic
TCTCGTTTGCCATACTTTGA+TGG 0.326312 3.1:+85727616 MS.gene014787:CDS
TTGCATCACCAGAATGTCTT+TGG 0.327789 3.1:-85727782 None:intergenic
CCTCTGAAACACGCAAATAA+TGG 0.331997 3.1:+85724572 MS.gene014787:CDS
GTTTCTCAACTTGCTACATA+TGG 0.336552 3.1:+85727231 MS.gene014787:CDS
CATTTGCTCTGCTTGCTATA+AGG 0.336680 3.1:+85728689 MS.gene014787:CDS
CACGAGTTCATGCTTAGAAT+TGG 0.340621 3.1:+85724928 MS.gene014787:CDS
GGGTCAGATAGTCTCCCTTC+TGG 0.359944 3.1:-85724404 None:intergenic
CTTGGGAAGGGTTCCGAACT+TGG 0.366108 3.1:+85723801 MS.gene014787:CDS
TCTTTGGCAGTGTCTTTAGA+AGG 0.367904 3.1:-85727766 None:intergenic
CAACACCACTATGTCAATTT+GGG 0.370714 3.1:+85728778 MS.gene014787:CDS
GGTGGGAAAATTACATTCAA+TGG 0.372058 3.1:+85726124 MS.gene014787:CDS
CCATATGAAACGGGTAAGTT+AGG 0.379009 3.1:-85724503 None:intergenic
CAAACTGAAATTGATACTTC+TGG 0.380328 3.1:-85728518 None:intergenic
ATGTGTACACAACGCTGATT+TGG 0.380704 3.1:-85726999 None:intergenic
AGACACTGCCAAAGACATTC+TGG 0.381560 3.1:+85727774 MS.gene014787:CDS
ACTGAAGAAAATATTATTGT+TGG 0.383324 3.1:+85727529 MS.gene014787:CDS
CCAAATATTCCCACCAAGTT+CGG 0.389518 3.1:-85723814 None:intergenic
TGCTTAGAATTGGAAGATAC+AGG 0.390600 3.1:+85724938 MS.gene014787:CDS
CGCATTCGGAGCCAAACTCC+TGG 0.392733 3.1:-85726971 None:intergenic
CATGTTGTGGCGTACGCATC+AGG 0.393034 3.1:+85726023 MS.gene014787:CDS
TCTTGATCTATAAGAGAATT+CGG 0.393830 3.1:-85726787 None:intergenic
GGCAGTGTCTTTAGAAGGAT+TGG 0.396884 3.1:-85727761 None:intergenic
TATCCGCTGAAACAAGTTTA+GGG 0.397186 3.1:-85724877 None:intergenic
CTTCTGTTTCAGCAGATTGA+AGG 0.398990 3.1:+85726918 MS.gene014787:CDS
CTGATTTGGATTGCCGCATT+CGG 0.399351 3.1:-85726985 None:intergenic
GGTGCAAAATTCGAGTAAAT+CGG 0.403532 3.1:+85729027 MS.gene014787:CDS
TCCCAGACGCTATCACTTCA+TGG 0.405486 3.1:-85728076 None:intergenic
CCTAACTTACCCGTTTCATA+TGG 0.408983 3.1:+85724503 MS.gene014787:CDS
TGCCATGAAGTGATAGCGTC+TGG 0.409694 3.1:+85728074 MS.gene014787:CDS
AAAATAGTTGCTACTTGATC+TGG 0.409883 3.1:-85724549 None:intergenic
GAGGACATACAAGGCAGAAC+TGG 0.410877 3.1:+85725283 MS.gene014787:CDS
GTGGGAAAATTACATTCAAT+GGG 0.411726 3.1:+85726125 MS.gene014787:CDS
CTGCCTTGCTCTCCTGATGA+TGG 0.413683 3.1:+85724443 MS.gene014787:CDS
AATGTAGAATACCACGTTGC+AGG 0.414844 3.1:+85729117 MS.gene014787:CDS
TTCATATGGTGGAAGCAATC+TGG 0.416270 3.1:+85724517 MS.gene014787:CDS
TCTGAGAAAGGAATCTGTTC+AGG 0.416816 3.1:+85725537 MS.gene014787:CDS
CAGTAGTCTCCATCAAAGTA+TGG 0.418646 3.1:-85727625 None:intergenic
CCCTCGAAAGGCTTAGAATC+TGG 0.419221 3.1:+85725178 MS.gene014787:CDS
TCAAAACAGAGAGATTGTTT+GGG 0.419623 3.1:+85724773 MS.gene014787:CDS
GCCTGTGCTCCTTCAAGAAA+AGG 0.420899 3.1:+85727254 MS.gene014787:CDS
AAGCAACACATTCCGAATCT+TGG 0.427664 3.1:+85729349 MS.gene014787:CDS
GTGCAAAATTCGAGTAAATC+GGG 0.429183 3.1:+85729028 MS.gene014787:CDS
ATGTAAATCTTCAAATTGAA+TGG 0.432375 3.1:-85724846 None:intergenic
TGATAAGCTGAAAAGATGCT+TGG 0.436897 3.1:+85723783 None:intergenic
CGGCGTAGCTTATCATTCTT+CGG 0.442591 3.1:-85727320 None:intergenic
TATCCCATCCTGGTTGAATC+CGG 0.446469 3.1:-85725383 None:intergenic
CAGTCCGTGGGGAATCCTAC+TGG 0.448463 3.1:-85723927 None:intergenic
TGGTCACTGAGCATGGTTCT+TGG 0.450291 3.1:-85726471 None:intergenic
TGCAGCTCCACGCCAAGATT+CGG 0.450882 3.1:-85729361 None:intergenic
ACAATATATTTCAAAAGTGC+TGG 0.451731 3.1:+85728640 MS.gene014787:CDS
AAATGTGTGCATCAGAACTA+TGG 0.452913 3.1:-85728283 None:intergenic
GTCTTTGCAATTCCTGGAGT+GGG 0.453840 3.1:-85729090 None:intergenic
GGAAGAAGAATTTGATGCAC+AGG 0.454851 3.1:+85726066 MS.gene014787:CDS
CCTGTGCTCCTTCAAGAAAA+GGG 0.454880 3.1:+85727255 MS.gene014787:CDS
CAGTTAGAGACTATCGAGTC+TGG 0.455443 3.1:+85725148 MS.gene014787:CDS
GCAGAGCAAATGGTACATTC+TGG 0.456546 3.1:-85728678 None:intergenic
AAATGACATACAACCGTCAC+TGG 0.459682 3.1:+85723964 MS.gene014787:CDS
TTCTTGATTTGAGAACAGTT+TGG 0.463384 3.1:-85728984 None:intergenic
CACACACATATCAGCAAGTA+GGG 0.463928 3.1:-85724477 None:intergenic
TTCTAAGTGGTCACTGAGCA+TGG 0.465266 3.1:-85726478 None:intergenic
CTACTGGTGTGGTTATGTTA+TGG 0.465543 3.1:+85727642 MS.gene014787:CDS
GATAAGCTGAAAAGATGCTT+GGG 0.467582 3.1:+85723784 None:intergenic
TGTTCTGAAAATCCAACTCC+TGG 0.467769 3.1:-85724973 None:intergenic
GTAGTAATAATTCCAGCATA+GGG 0.468557 3.1:-85724136 None:intergenic
ATGGACTTTCCCATTGAAGT+AGG 0.469146 3.1:-85724827 None:intergenic
ACTTACCACTGCTGCTTCAA+AGG 0.469361 3.1:+85724157 MS.gene014787:CDS
CATCATCAGGAGAGCAAGGC+AGG 0.473198 3.1:-85724442 None:intergenic
TGAGCAATTTGCCCCTATGC+TGG 0.473268 3.1:+85724124 MS.gene014787:CDS
TAGGGTTGTTTAAATGGTAG+AGG 0.474232 3.1:-85728578 None:intergenic
AACCCTACTCTGGTGACTGT+TGG 0.474451 3.1:+85728594 MS.gene014787:CDS
GATGCACACATTTCAAAGAA+TGG 0.475962 3.1:+85728293 MS.gene014787:CDS
ATCATTATGCTTAGTGTTGG+AGG 0.477828 3.1:-85728442 None:intergenic
GAAATACAGCAGAAACTCAA+TGG 0.479828 3.1:+85725204 MS.gene014787:CDS
GCGAAATAAACCCCAGGAGT+TGG 0.480620 3.1:+85724961 MS.gene014787:CDS
GAGGACATTCAAGGCAGAAC+CGG 0.485084 3.1:+85725364 MS.gene014787:CDS
TTATGGAAGAGAGAGCAAAC+TGG 0.486815 3.1:+85726520 MS.gene014787:CDS
TTTCTCAACTTGCTACATAT+GGG 0.487718 3.1:+85727232 MS.gene014787:CDS
TACGCTGATTCAACGTCTCC+AGG 0.490165 3.1:-85724328 None:intergenic
GATATCATTATGCTTAGTGT+TGG 0.494216 3.1:-85728445 None:intergenic
GCCAAAAGATATTGCCTACC+AGG 0.497791 3.1:+85728009 MS.gene014787:CDS
CGAGGTGCATACACTATGTC+AGG 0.500355 3.1:+85728316 MS.gene014787:CDS
GATCTATAAGAGAATTCGGC+AGG 0.501906 3.1:-85726783 None:intergenic
CTTATAGCAAGCAGAGCAAA+TGG 0.504219 3.1:-85728688 None:intergenic
AGAACTGGATTCATCCAGGC+GGG 0.506173 3.1:+85725298 MS.gene014787:CDS
TCGTGAGTCAAATGAGAAAA+CGG 0.506997 3.1:+85728803 MS.gene014787:CDS
TTATACTAACTGCCCACTCC+AGG 0.508191 3.1:+85729078 MS.gene014787:CDS
CCATTATTTGCGTGTTTCAG+AGG 0.509221 3.1:-85724572 None:intergenic
CACGCAGATGCTGAAACTGC+TGG 0.511708 3.1:+85728905 MS.gene014787:intron
AGAACTTATTATTGTTCATG+AGG 0.512614 3.1:+85725336 MS.gene014787:CDS
GGGGTTGATGAACCATCATC+AGG 0.513452 3.1:-85724455 None:intergenic
AACTTACCCGTTTCATATGG+TGG 0.514230 3.1:+85724506 MS.gene014787:CDS
AGTAGTAATAATTCCAGCAT+AGG 0.515149 3.1:-85724137 None:intergenic
GTTATAAGAATTCTAAAGGT+GGG 0.515230 3.1:+85726107 MS.gene014787:CDS
GGTTATTATGGCGTTCCAGA+AGG 0.515241 3.1:+85724389 MS.gene014787:CDS
GCCAGATTCTAAGCCTTTCG+AGG 0.516084 3.1:-85725179 None:intergenic
GATCATCATTGATGAATACT+TGG 0.516147 3.1:-85728556 None:intergenic
GGGAAGGGTTCCGAACTTGG+TGG 0.516706 3.1:+85723804 MS.gene014787:CDS
TTGCTTCCACCATATGAAAC+GGG 0.517072 3.1:-85724512 None:intergenic
ACATATTAGTAGTCTGAGAA+AGG 0.521580 3.1:+85725525 MS.gene014787:CDS
CAGTAGGATTCCCCACGGAC+TGG 0.521820 3.1:+85723928 MS.gene014787:CDS
ATTGCTTCCACCATATGAAA+CGG 0.523926 3.1:-85724513 None:intergenic
AGCCTCAATTATTGTATTTG+GGG 0.527381 3.1:-85725461 None:intergenic
ATCCCCAAATACAATAATTG+AGG 0.528154 3.1:+85725459 MS.gene014787:CDS
CTCCAGGAATTGCAAAGACT+CGG 0.528433 3.1:+85729094 MS.gene014787:CDS
AGAAATTTCAGGAGTGTGAA+AGG 0.528641 3.1:+85728123 MS.gene014787:CDS
GGAAGGGTTCCGAACTTGGT+GGG 0.529897 3.1:+85723805 MS.gene014787:CDS
TTCCAACAGTCACCAGAGTA+GGG 0.530507 3.1:-85728596 None:intergenic
GAACTTATTATTGTTCATGA+GGG 0.530986 3.1:+85725337 MS.gene014787:CDS
TGGATTACTTACATGTGGAC+TGG 0.532864 3.1:-85723907 None:intergenic
GTTTCTAAGTCTGATGCCGC+TGG 0.533231 3.1:+85724368 MS.gene014787:CDS
ATTACATCTGAGGAGGAAGC+AGG 0.535806 3.1:+85725929 MS.gene014787:CDS
TTTCCAACAGTCACCAGAGT+AGG 0.537493 3.1:-85728597 None:intergenic
ACGTGTGAACAAATCAATCA+AGG 0.540321 3.1:-85725488 None:intergenic
TATTGTTCATGAGGGTGAAG+AGG 0.540740 3.1:+85725345 MS.gene014787:CDS
AGGGAATGAGAATCTTGATA+AGG 0.541461 3.1:+85726554 MS.gene014787:CDS
TCTAAGCATGAACTCGTGCT+AGG 0.543758 3.1:-85724923 None:intergenic
AATGCAATAAATGCAAAAGA+TGG 0.545817 3.1:+85726301 MS.gene014787:CDS
CCATTTAAACAACCCTACTC+TGG 0.546250 3.1:+85728584 MS.gene014787:CDS
GGATGATAACGCCAGTCCGT+GGG 0.546321 3.1:-85723939 None:intergenic
AGTCTTTGCAATTCCTGGAG+TGG 0.547250 3.1:-85729091 None:intergenic
TCTGCTTGCTATAAGGATAG+AGG 0.547525 3.1:+85728696 MS.gene014787:CDS
TTTCAAATAATCCACTCTCA+AGG 0.548304 3.1:-85728470 None:intergenic
AGAAGGATTGGCATGTCCCA+TGG 0.548735 3.1:-85727749 None:intergenic
GCACACACATATCAGCAAGT+AGG 0.548931 3.1:-85724478 None:intergenic
TCAGCGTATGCAAGCTCTAG+TGG 0.552958 3.1:+85724343 MS.gene014787:CDS
GTTCTGAAAATCCAACTCCT+GGG 0.553233 3.1:-85724972 None:intergenic
GAGGGTGAAGAGGACATTCA+AGG 0.555916 3.1:+85725355 MS.gene014787:CDS
TCAACAGTAGGCCTACTCTC+AGG 0.556868 3.1:+85725230 MS.gene014787:CDS
GTGTGTTATAAGAATTCTAA+AGG 0.558028 3.1:+85726103 MS.gene014787:CDS
TTAAGTTCCTTCCTGAGAGT+AGG 0.559411 3.1:-85725241 None:intergenic
ACACATGCCAATTATGTCAA+AGG 0.562566 3.1:+85725963 MS.gene014787:CDS
CATACTTTGATGGAGACTAC+TGG 0.567433 3.1:+85727626 MS.gene014787:CDS
CAGGAGTTTGGCTCCGAATG+CGG 0.567886 3.1:+85726972 MS.gene014787:CDS
TATGGAAGAGAGAGCAAACT+GGG 0.568310 3.1:+85726521 MS.gene014787:CDS
AGATATTGATGACGATGAAG+AGG 0.569424 3.1:+85725264 MS.gene014787:CDS
AGGCAGAACTGGATTCATCC+AGG 0.569909 3.1:+85725294 MS.gene014787:CDS
GTTGCTACTTGATCTGGTGT+TGG 0.574954 3.1:-85724543 None:intergenic
GGGATGATAACGCCAGTCCG+TGG 0.575974 3.1:-85723940 None:intergenic
GCATTCGGAGCCAAACTCCT+GGG 0.579594 3.1:-85726970 None:intergenic
CGATTCCCAAATTGACATAG+TGG 0.580947 3.1:-85728783 None:intergenic
CCTGAGAGAAGAACAAAGAG+TGG 0.581788 3.1:+85727053 MS.gene014787:CDS
TCATTATGCTTAGTGTTGGA+GGG 0.581798 3.1:-85728441 None:intergenic
AACTGGATTCATCCAGGCGG+GGG 0.582008 3.1:+85725300 MS.gene014787:CDS
CAAAACAGAGAGATTGTTTG+GGG 0.582814 3.1:+85724774 MS.gene014787:CDS
AGCTGAAAAGATGCTTGGGA+AGG 0.584645 3.1:+85723788 None:intergenic
GCAGGTCATGAAGAATAAAA+GGG 0.584667 3.1:-85724424 None:intergenic
GAACCGGATTCAACCAGGAT+GGG 0.586122 3.1:+85725380 MS.gene014787:CDS
AGGCAGAACCGGATTCAACC+AGG 0.589059 3.1:+85725375 MS.gene014787:CDS
GAACCATCATCAGGAGAGCA+AGG 0.589504 3.1:-85724446 None:intergenic
TGATAGCGTCTGGGAAGCGA+TGG 0.590031 3.1:+85728084 MS.gene014787:CDS
CCAGATTCTAAGCCTTTCGA+GGG 0.591619 3.1:-85725178 None:intergenic
ATTAACACAGATTACATCTG+AGG 0.591749 3.1:+85725919 MS.gene014787:intron
GAACAGTTTGGATAAGAGCA+TGG 0.592137 3.1:-85728972 None:intergenic
CAAACGAGAAGTTGTCACCT+TGG 0.592914 3.1:-85727602 None:intergenic
AAATAGAGCTTTAAAGACCA+TGG 0.593540 3.1:+85727732 MS.gene014787:CDS
ATTCCCTAAACTTGTTTCAG+CGG 0.593760 3.1:+85724874 MS.gene014787:CDS
GCTGAAAAGATGCTTGGGAA+GGG 0.596659 3.1:+85723789 None:intergenic
GTTATTATGGCGTTCCAGAA+GGG 0.598014 3.1:+85724390 MS.gene014787:CDS
TACAGGGCGAAATAAACCCC+AGG 0.598885 3.1:+85724955 MS.gene014787:CDS
GTTATGTTATGGAAGCAGCC+AGG 0.598981 3.1:+85727653 MS.gene014787:CDS
TACGAAAAGACGGAAAATGA+CGG 0.604361 3.1:+85725021 MS.gene014787:CDS
GAAAGTGTTTCAAAAGAACA+AGG 0.604473 3.1:-85725112 None:intergenic
CAGCGTATGCAAGCTCTAGT+GGG 0.605184 3.1:+85724344 MS.gene014787:CDS
AATGATATCATCCTTGAGAG+TGG 0.608883 3.1:+85728459 MS.gene014787:CDS
GCCATGAAGTGATAGCGTCT+GGG 0.609701 3.1:+85728075 MS.gene014787:CDS
TGATCAATCGACTTACAAGA+TGG 0.610821 3.1:+85725084 MS.gene014787:CDS
CTGTGCTCCTTCAAGAAAAG+GGG 0.610873 3.1:+85727256 MS.gene014787:CDS
TCTGGAATGATTCCCTCGAA+AGG 0.612821 3.1:+85725166 MS.gene014787:CDS
TGTTATAAGAATTCTAAAGG+TGG 0.613504 3.1:+85726106 MS.gene014787:CDS
TTCTGAAAATCCAACTCCTG+GGG 0.615940 3.1:-85724971 None:intergenic
GACGATGAAGAGGACATACA+AGG 0.617846 3.1:+85725274 MS.gene014787:CDS
AGAACCGGATTCAACCAGGA+TGG 0.619756 3.1:+85725379 MS.gene014787:CDS
AATAGAGCTTTAAAGACCAT+GGG 0.619881 3.1:+85727733 MS.gene014787:CDS
TGCTACAACCTACGAAAAGA+CGG 0.621114 3.1:+85725011 MS.gene014787:CDS
ATGGTAAACAAAGGTACGAA+GGG 0.622204 3.1:-85727081 None:intergenic
CCTACTGGATTACTTACATG+TGG 0.622783 3.1:-85723912 None:intergenic
ACAAACCTTTGAAGCAGCAG+TGG 0.625425 3.1:-85724162 None:intergenic
GCAGGAGGAATATATGAACC+TGG 0.625899 3.1:+85724310 MS.gene014787:intron
AGAATGATAAGCTACGCCGT+TGG 0.627014 3.1:+85727324 MS.gene014787:CDS
CCAAAAGATATTGCCTACCA+GGG 0.627033 3.1:+85728010 MS.gene014787:CDS
CACACATATCAGCAAGTAGG+GGG 0.627930 3.1:-85724475 None:intergenic
CAATATCTCATGGTAAACAA+AGG 0.628488 3.1:-85727090 None:intergenic
GCATGGTTCAGTATTAGTTG+CGG 0.631845 3.1:-85728955 None:intergenic
ACTCAATGGAAATCAACAGT+AGG 0.634159 3.1:+85725218 MS.gene014787:CDS
CAGTAGGCCTACTCTCAGGA+AGG 0.640031 3.1:+85725234 MS.gene014787:CDS
AAAGAAATGATCATATACGT+TGG 0.641068 3.1:-85727557 None:intergenic
CATGGTAAACAAAGGTACGA+AGG 0.641848 3.1:-85727082 None:intergenic
GTTTCTGGACATCATTCCAG+AGG 0.650501 3.1:+85726752 MS.gene014787:CDS
TCATTGATGAATACTTGGCA+CGG 0.650719 3.1:-85728551 None:intergenic
TGCAAAATTCGAGTAAATCG+GGG 0.651340 3.1:+85729029 MS.gene014787:CDS
GAAGAAGAATTTGATGCACA+GGG 0.652467 3.1:+85726067 MS.gene014787:CDS
AACACAGATTACATCTGAGG+AGG 0.653744 3.1:+85725922 MS.gene014787:intron
ATCTATAAGAGAATTCGGCA+GGG 0.656485 3.1:-85726782 None:intergenic
GCTTAGAATTGGAAGATACA+GGG 0.658280 3.1:+85724939 MS.gene014787:CDS
GAACTGGATTCATCCAGGCG+GGG 0.658515 3.1:+85725299 MS.gene014787:CDS
CCACATGTAAGTAATCCAGT+AGG 0.658631 3.1:+85723912 MS.gene014787:CDS
TTTAGAATTCTTATAACACA+CGG 0.658685 3.1:-85726101 None:intergenic
TAGTAATAATTCCAGCATAG+GGG 0.660364 3.1:-85724135 None:intergenic
AGCTATTCTCTCATGCTCGT+AGG 0.662256 3.1:+85729006 MS.gene014787:CDS
ACACATTCCGAATCTTGGCG+TGG 0.679411 3.1:+85729354 MS.gene014787:CDS
GATGATAACGCCAGTCCGTG+GGG 0.692925 3.1:-85723938 None:intergenic
TTTGATGGAGACTACTGGTG+TGG 0.693838 3.1:+85727631 MS.gene014787:CDS
ACACATTTCAAAGAATGGCG+AGG 0.706634 3.1:+85728298 MS.gene014787:CDS
TAATCCAGTAGGATTCCCCA+CGG 0.712567 3.1:+85723923 MS.gene014787:CDS
TGGAACGCCATAATAACCAG+CGG 0.726670 3.1:-85724384 None:intergenic
ACACATATCAGCAAGTAGGG+GGG 0.728095 3.1:-85724474 None:intergenic
ACACACATATCAGCAAGTAG+GGG 0.734890 3.1:-85724476 None:intergenic
CAGAACTGGATTCATCCAGG+CGG 0.736162 3.1:+85725297 MS.gene014787:CDS
TGGGAAAATTACATTCAATG+GGG 0.742909 3.1:+85726126 MS.gene014787:CDS
TTGATGAATACTTGGCACGG+CGG 0.746659 3.1:-85728548 None:intergenic
ACAGTAACACACCTGCAACG+TGG 0.761219 3.1:-85729128 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAAATAAATATAAAGAAAT+AGG - chr3.1:85729294-85729313 None:intergenic 10.0%
!! TAAAACATAAATAGAAAGAA+TGG - chr3.1:85727164-85727183 None:intergenic 15.0%
!!! ATATTTATTTTGATTTTGCA+GGG + chr3.1:85729302-85729321 MS.gene014787:intron 15.0%
!!! TATATTTATTTTGATTTTGC+AGG + chr3.1:85729301-85729320 MS.gene014787:intron 15.0%
!! AAAACAAAGAAGATAAAAGA+AGG - chr3.1:85727429-85727448 None:intergenic 20.0%
!! AAGTATGTATTCATTTCAAA+GGG - chr3.1:85728192-85728211 None:intergenic 20.0%
!! ACGAATAAGGATTAAAAATT+GGG - chr3.1:85724625-85724644 None:intergenic 20.0%
!! ACTGAAGAAAATATTATTGT+TGG + chr3.1:85727529-85727548 MS.gene014787:CDS 20.0%
!! ATAAAAGAATATATCCCATT+GGG - chr3.1:85727861-85727880 None:intergenic 20.0%
!! ATCATGTAAATAACTTAAAC+TGG - chr3.1:85727923-85727942 None:intergenic 20.0%
!! ATGTAAATCTTCAAATTGAA+TGG - chr3.1:85724849-85724868 None:intergenic 20.0%
!! CGCTTAAAAGAAATTAAAAA+CGG + chr3.1:85726399-85726418 MS.gene014787:CDS 20.0%
!! GTATCTTTCTATGATAAAAA+AGG + chr3.1:85727504-85727523 MS.gene014787:CDS 20.0%
!! TAGAATTGTTAACTTCTATA+TGG - chr3.1:85725900-85725919 None:intergenic 20.0%
!! TATAAAAGAATATATCCCAT+TGG - chr3.1:85727862-85727881 None:intergenic 20.0%
!! TTTATATTGTTTGTTTATGC+AGG + chr3.1:85727482-85727501 MS.gene014787:intron 20.0%
!!! CGTTTTTAATTTCTTTTAAG+CGG - chr3.1:85726401-85726420 None:intergenic 20.0%
!!! TTCTTTTTAAACTCTTTCTA+TGG + chr3.1:85727119-85727138 MS.gene014787:intron 20.0%
!!! TTTAGAATTCTTATAACACA+CGG - chr3.1:85726104-85726123 None:intergenic 20.0%
! AAAAAAATGACTGTTGTGAA+AGG - chr3.1:85729249-85729268 None:intergenic 25.0%
! AAAGAAATGATCATATACGT+TGG - chr3.1:85727560-85727579 None:intergenic 25.0%
! AAATGAATACATACTTGAAC+TGG + chr3.1:85728196-85728215 MS.gene014787:intron 25.0%
! AATGCAATAAATGCAAAAGA+TGG + chr3.1:85726301-85726320 MS.gene014787:CDS 25.0%
! AGAAAAATACCAATATCTCA+TGG - chr3.1:85727103-85727122 None:intergenic 25.0%
! AGAACTTATTATTGTTCATG+AGG + chr3.1:85725336-85725355 MS.gene014787:CDS 25.0%
! AGTAATTTCATGCAAAACAT+TGG + chr3.1:85728382-85728401 MS.gene014787:intron 25.0%
! CAAACAATATAAAGATTCAG+TGG - chr3.1:85727475-85727494 None:intergenic 25.0%
! CAAATTCTCTCAAATTCTAT+AGG - chr3.1:85729169-85729188 None:intergenic 25.0%
! CAAGTATGTATTCATTTCAA+AGG - chr3.1:85728193-85728212 None:intergenic 25.0%
! CACGAATAAGGATTAAAAAT+TGG - chr3.1:85724626-85724645 None:intergenic 25.0%
! CGAATAAGGATTAAAAATTG+GGG - chr3.1:85724624-85724643 None:intergenic 25.0%
! CTATAGAATTTGAGAGAATT+TGG + chr3.1:85729167-85729186 MS.gene014787:intron 25.0%
! GAAAATCATATGAAAACTTC+AGG - chr3.1:85728354-85728373 None:intergenic 25.0%
! GAACTTATTATTGTTCATGA+GGG + chr3.1:85725337-85725356 MS.gene014787:CDS 25.0%
! GCAAAAGTAGCAAATTAAAT+GGG - chr3.1:85724737-85724756 None:intergenic 25.0%
! GTGTGTTATAAGAATTCTAA+AGG + chr3.1:85726103-85726122 MS.gene014787:CDS 25.0%
! TAATCGATATTGAAACTTAC+AGG - chr3.1:85726208-85726227 None:intergenic 25.0%
! TCTTGATCTATAAGAGAATT+CGG - chr3.1:85726790-85726809 None:intergenic 25.0%
! TGCAAAAGTAGCAAATTAAA+TGG - chr3.1:85724738-85724757 None:intergenic 25.0%
! TTCTTCCTTTCTACAAAAAT+AGG - chr3.1:85726053-85726072 None:intergenic 25.0%
! TTGAATTTCTGCAAAATTGT+AGG + chr3.1:85726659-85726678 MS.gene014787:intron 25.0%
!! ACAATATATTTCAAAAGTGC+TGG + chr3.1:85728640-85728659 MS.gene014787:CDS 25.0%
!! ACCTTGATTTTTGTAAGAAA+CGG + chr3.1:85727207-85727226 MS.gene014787:CDS 25.0%
!! ATGGTTCTTCTTTTAATCAT+TGG + chr3.1:85725677-85725696 MS.gene014787:intron 25.0%
!! GTTATAAGAATTCTAAAGGT+GGG + chr3.1:85726107-85726126 MS.gene014787:CDS 25.0%
!! TACAATTTTGCAGAAATTCA+AGG - chr3.1:85726660-85726679 None:intergenic 25.0%
!! TCTATTATGTCTGTATTTTC+AGG + chr3.1:85726890-85726909 MS.gene014787:intron 25.0%
!! TGTTATAAGAATTCTAAAGG+TGG + chr3.1:85726106-85726125 MS.gene014787:CDS 25.0%
!! TTATCAAAACATCTCTTTTG+CGG - chr3.1:85723882-85723901 None:intergenic 25.0%
!! TTGATTCTGTCAAGTATTTT+AGG + chr3.1:85727030-85727049 MS.gene014787:CDS 25.0%
!!! AGAGTGGATTATTTGAAAAT+AGG + chr3.1:85728475-85728494 MS.gene014787:CDS 25.0%
!!! CAAAAAGTCTTTTTTCTAAG+TGG - chr3.1:85726494-85726513 None:intergenic 25.0%
AAATCAATGTTGCACGAATA+AGG - chr3.1:85724638-85724657 None:intergenic 30.0%
ACAACTGATGAAGAATTTCT+TGG - chr3.1:85723849-85723868 None:intergenic 30.0%
ACAGCCTCAATTATTGTATT+TGG - chr3.1:85725466-85725485 None:intergenic 30.0%
ACATATTAGTAGTCTGAGAA+AGG + chr3.1:85725525-85725544 MS.gene014787:CDS 30.0%
AGCCAAAGAATAAATCAGAA+AGG - chr3.1:85729200-85729219 None:intergenic 30.0%
AGCCTCAATTATTGTATTTG+GGG - chr3.1:85725464-85725483 None:intergenic 30.0%
AGTAGTAATAATTCCAGCAT+AGG - chr3.1:85724140-85724159 None:intergenic 30.0%
ATAAAGATTCAGTGGTTACA+TGG - chr3.1:85727467-85727486 None:intergenic 30.0%
ATCAAGGTAATTGAAAACAC+TGG - chr3.1:85725578-85725597 None:intergenic 30.0%
ATCCCCAAATACAATAATTG+AGG + chr3.1:85725459-85725478 MS.gene014787:CDS 30.0%
ATTAACACAGATTACATCTG+AGG + chr3.1:85725919-85725938 MS.gene014787:intron 30.0%
ATTTGGTTAAAGCTCATGAA+TGG + chr3.1:85725658-85725677 MS.gene014787:intron 30.0%
CAAACTGAAATTGATACTTC+TGG - chr3.1:85728521-85728540 None:intergenic 30.0%
CAATATCTCATGGTAAACAA+AGG - chr3.1:85727093-85727112 None:intergenic 30.0%
CAGCCTCAATTATTGTATTT+GGG - chr3.1:85725465-85725484 None:intergenic 30.0%
CCACAACATGAACAAAAAAT+TGG - chr3.1:85726013-85726032 None:intergenic 30.0%
CTACAACAACAAAAGAGATT+TGG + chr3.1:85726344-85726363 MS.gene014787:CDS 30.0%
CTCCTTTCTGATTTATTCTT+TGG + chr3.1:85729195-85729214 MS.gene014787:intron 30.0%
CTGGATAAGAAAAAGAATGT+AGG + chr3.1:85723983-85724002 MS.gene014787:intron 30.0%
GATATCATTATGCTTAGTGT+TGG - chr3.1:85728448-85728467 None:intergenic 30.0%
GATCATCATTGATGAATACT+TGG - chr3.1:85728559-85728578 None:intergenic 30.0%
GTAGTAATAATTCCAGCATA+GGG - chr3.1:85724139-85724158 None:intergenic 30.0%
GTGGGAAAATTACATTCAAT+GGG + chr3.1:85726125-85726144 MS.gene014787:CDS 30.0%
TAGTAATAATTCCAGCATAG+GGG - chr3.1:85724138-85724157 None:intergenic 30.0%
TATGTATTCATTTCAAAGGG+AGG - chr3.1:85728189-85728208 None:intergenic 30.0%
TCAAAACAGAGAGATTGTTT+GGG + chr3.1:85724773-85724792 MS.gene014787:CDS 30.0%
TCTTTGTTCCTACTGAAAAA+GGG + chr3.1:85727575-85727594 MS.gene014787:CDS 30.0%
TGCATTGAGTGCAATAAAAA+AGG + chr3.1:85728222-85728241 MS.gene014787:intron 30.0%
TGGGAAAATTACATTCAATG+GGG + chr3.1:85726126-85726145 MS.gene014787:CDS 30.0%
TTCCAAAAGGTAAAGCTATT+TGG + chr3.1:85725641-85725660 MS.gene014787:intron 30.0%
TTCTTTGTTCCTACTGAAAA+AGG + chr3.1:85727574-85727593 MS.gene014787:CDS 30.0%
TTTCAAATAATCCACTCTCA+AGG - chr3.1:85728473-85728492 None:intergenic 30.0%
! AAAATAGTTGCTACTTGATC+TGG - chr3.1:85724552-85724571 None:intergenic 30.0%
! AAATTAGCAGCTTTTGGTAA+AGG - chr3.1:85726435-85726454 None:intergenic 30.0%
! ATGAGTTTTCCTACTTCAAT+GGG + chr3.1:85724818-85724837 MS.gene014787:CDS 30.0%
! CATATGAAAACTTCAGGTTT+AGG - chr3.1:85728348-85728367 None:intergenic 30.0%
! CCTTGATTTTTGTAAGAAAC+GGG + chr3.1:85727208-85727227 MS.gene014787:CDS 30.0%
! CTTGATTTTTGTAAGAAACG+GGG + chr3.1:85727209-85727228 MS.gene014787:CDS 30.0%
! CTTTGTTTACCATGAGATAT+TGG + chr3.1:85727091-85727110 MS.gene014787:CDS 30.0%
! GGAGTAGATATATGCATTTT+TGG + chr3.1:85726939-85726958 MS.gene014787:CDS 30.0%
! GTTGATGAAAGTAAAAGACA+AGG - chr3.1:85727820-85727839 None:intergenic 30.0%
! TATGAGTTTTCCTACTTCAA+TGG + chr3.1:85724817-85724836 MS.gene014787:CDS 30.0%
! TTACCAAAAGCTGCTAATTT+TGG + chr3.1:85726435-85726454 MS.gene014787:CDS 30.0%
! TTCTTGATTTGAGAACAGTT+TGG - chr3.1:85728987-85729006 None:intergenic 30.0%
! TTCTTTTTCTTATCCAGTGA+CGG - chr3.1:85723980-85723999 None:intergenic 30.0%
!! AAATAGAGCTTTAAAGACCA+TGG + chr3.1:85727732-85727751 MS.gene014787:CDS 30.0%
!! AACCAAATAGCTTTACCTTT+TGG - chr3.1:85725646-85725665 None:intergenic 30.0%
!! AATAGAGCTTTAAAGACCAT+GGG + chr3.1:85727733-85727752 MS.gene014787:CDS 30.0%
!! ATGGTCTTTAAAGCTCTATT+TGG - chr3.1:85727733-85727752 None:intergenic 30.0%
!! GAAAGTGTTTCAAAAGAACA+AGG - chr3.1:85725115-85725134 None:intergenic 30.0%
!! GCTTTTTCCTTTGACATAAT+TGG - chr3.1:85725973-85725992 None:intergenic 30.0%
!! TTTCTCAACTTGCTACATAT+GGG + chr3.1:85727232-85727251 MS.gene014787:CDS 30.0%
!!! CAGTTGTTTTTCTACGAATT+TGG + chr3.1:85724288-85724307 MS.gene014787:intron 30.0%
!!! CCAATTTTTTGTTCATGTTG+TGG + chr3.1:85726010-85726029 MS.gene014787:CDS 30.0%
!!! GAGAACCTATTTTTGTAGAA+AGG + chr3.1:85726045-85726064 MS.gene014787:CDS 30.0%
!!! TCACAACAGTCATTTTTTTG+TGG + chr3.1:85729250-85729269 MS.gene014787:intron 30.0%
!!! TTAATTTGCTACTTTTGCAG+TGG + chr3.1:85724739-85724758 MS.gene014787:intron 30.0%
AAATGTGTGCATCAGAACTA+TGG - chr3.1:85728286-85728305 None:intergenic 35.0%
AACTCATAGACTCGTTATTC+TGG - chr3.1:85724805-85724824 None:intergenic 35.0%
AATGATATCATCCTTGAGAG+TGG + chr3.1:85728459-85728478 MS.gene014787:CDS 35.0%
AATTGGGGGGAAAAAAGAAA+AGG - chr3.1:85727977-85727996 None:intergenic 35.0%
ACACATGCCAATTATGTCAA+AGG + chr3.1:85725963-85725982 MS.gene014787:CDS 35.0%
ACGGTATGAACTTAATTCTC+AGG + chr3.1:85728822-85728841 MS.gene014787:intron 35.0%
ACGTGTGAACAAATCAATCA+AGG - chr3.1:85725491-85725510 None:intergenic 35.0%
ACTCAATGGAAATCAACAGT+AGG + chr3.1:85725218-85725237 MS.gene014787:CDS 35.0%
ACTTCTGGCAAAAACTCAAA+AGG - chr3.1:85728506-85728525 None:intergenic 35.0%
ACTTGTTTCAGCGGATATTT+CGG + chr3.1:85724883-85724902 MS.gene014787:CDS 35.0%
AGGGAATGAGAATCTTGATA+AGG + chr3.1:85726554-85726573 MS.gene014787:CDS 35.0%
AGTCATACGTAAACAGATCA+AGG - chr3.1:85725594-85725613 None:intergenic 35.0%
ATATCCGCTGAAACAAGTTT+AGG - chr3.1:85724881-85724900 None:intergenic 35.0%
ATCTATAAGAGAATTCGGCA+GGG - chr3.1:85726785-85726804 None:intergenic 35.0%
ATTCAACACAGAGACACATA+AGG - chr3.1:85727365-85727384 None:intergenic 35.0%
ATTGCTTCCACCATATGAAA+CGG - chr3.1:85724516-85724535 None:intergenic 35.0%
CAAAACAGAGAGATTGTTTG+GGG + chr3.1:85724774-85724793 MS.gene014787:CDS 35.0%
CAAACTGGGAAAAAGTTGAA+GGG + chr3.1:85726535-85726554 MS.gene014787:CDS 35.0%
CAAAGAAAGAAGCTCAAAGT+CGG - chr3.1:85724676-85724695 None:intergenic 35.0%
CAACACCACTATGTCAATTT+GGG + chr3.1:85728778-85728797 MS.gene014787:CDS 35.0%
CACTGAATGCAAGAAATTTC+AGG + chr3.1:85728112-85728131 MS.gene014787:CDS 35.0%
CATGAACAAAAAATTGGCAC+TGG - chr3.1:85726007-85726026 None:intergenic 35.0%
CATGAACCAACTATTCCAAA+AGG + chr3.1:85725628-85725647 MS.gene014787:intron 35.0%
CCCGTTTCTTACAAAAATCA+AGG - chr3.1:85727211-85727230 None:intergenic 35.0%
CTGCTTAATTGACAGAATAC+AGG - chr3.1:85724271-85724290 None:intergenic 35.0%
GAAATACAGCAGAAACTCAA+TGG + chr3.1:85725204-85725223 MS.gene014787:CDS 35.0%
GAAGAAGAATTTGATGCACA+GGG + chr3.1:85726067-85726086 MS.gene014787:CDS 35.0%
GATGCACACATTTCAAAGAA+TGG + chr3.1:85728293-85728312 MS.gene014787:CDS 35.0%
GCAGGTCATGAAGAATAAAA+GGG - chr3.1:85724427-85724446 None:intergenic 35.0%
GCTTAGAATTGGAAGATACA+GGG + chr3.1:85724939-85724958 MS.gene014787:CDS 35.0%
GGGAAAAAAGAAAAGGAAGA+AGG - chr3.1:85727970-85727989 None:intergenic 35.0%
GGTGCAAAATTCGAGTAAAT+CGG + chr3.1:85729027-85729046 MS.gene014787:CDS 35.0%
GGTGGGAAAATTACATTCAA+TGG + chr3.1:85726124-85726143 MS.gene014787:CDS 35.0%
GTCAAAACAGAGAGATTGTT+TGG + chr3.1:85724772-85724791 MS.gene014787:CDS 35.0%
GTGCAAAATTCGAGTAAATC+GGG + chr3.1:85729028-85729047 MS.gene014787:CDS 35.0%
TACGAAAAGACGGAAAATGA+CGG + chr3.1:85725021-85725040 MS.gene014787:CDS 35.0%
TAGATCAAGAGTAAGTTCAG+TGG + chr3.1:85726800-85726819 MS.gene014787:intron 35.0%
TAGGGTTGTTTAAATGGTAG+AGG - chr3.1:85728581-85728600 None:intergenic 35.0%
TATCCAATCTGATGATAGGA+AGG - chr3.1:85727188-85727207 None:intergenic 35.0%
TATCCGCTGAAACAAGTTTA+GGG - chr3.1:85724880-85724899 None:intergenic 35.0%
TATCCTTCCTATCATCAGAT+TGG + chr3.1:85727182-85727201 MS.gene014787:intron 35.0%
TCAACACCACTATGTCAATT+TGG + chr3.1:85728777-85728796 MS.gene014787:CDS 35.0%
TCATTGATGAATACTTGGCA+CGG - chr3.1:85728554-85728573 None:intergenic 35.0%
TCGTGAGTCAAATGAGAAAA+CGG + chr3.1:85728803-85728822 MS.gene014787:CDS 35.0%
TGCAAAATTCGAGTAAATCG+GGG + chr3.1:85729029-85729048 MS.gene014787:CDS 35.0%
TGCTTAGAATTGGAAGATAC+AGG + chr3.1:85724938-85724957 MS.gene014787:CDS 35.0%
TGGCCAACCTAATGAAAATT+GGG - chr3.1:85727993-85728012 None:intergenic 35.0%
TTGGCCAACCTAATGAAAAT+TGG - chr3.1:85727994-85728013 None:intergenic 35.0%
TTTGAGTCAACTTGTGTTCA+TGG - chr3.1:85728731-85728750 None:intergenic 35.0%
! AAGGTATCCAATCTGATGAT+AGG - chr3.1:85727192-85727211 None:intergenic 35.0%
! ACCATATCTTTTTACAGTGC+TGG - chr3.1:85729058-85729077 None:intergenic 35.0%
! AGAAATTTCAGGAGTGTGAA+AGG + chr3.1:85728123-85728142 MS.gene014787:CDS 35.0%
! ATCATTATGCTTAGTGTTGG+AGG - chr3.1:85728445-85728464 None:intergenic 35.0%
! ATGGTAAACAAAGGTACGAA+GGG - chr3.1:85727084-85727103 None:intergenic 35.0%
! ATTCCCTAAACTTGTTTCAG+CGG + chr3.1:85724874-85724893 MS.gene014787:CDS 35.0%
! ATTTCTTTTAAGCGGCATAC+AGG - chr3.1:85726393-85726412 None:intergenic 35.0%
! GAAAGTGAATAAGCTGTTTC+TGG + chr3.1:85726737-85726756 MS.gene014787:CDS 35.0%
! TAATCATCCCCTTTTCTTGA+AGG - chr3.1:85727266-85727285 None:intergenic 35.0%
! TCATTATGCTTAGTGTTGGA+GGG - chr3.1:85728444-85728463 None:intergenic 35.0%
! TGATCAATCGACTTACAAGA+TGG + chr3.1:85725084-85725103 MS.gene014787:CDS 35.0%
! TGTTTTTCTACGAATTTGGC+AGG + chr3.1:85724292-85724311 MS.gene014787:intron 35.0%
! TTTTATCGTTTATCCCATCC+TGG - chr3.1:85725396-85725415 None:intergenic 35.0%
! TTTTCCCCCCAATTTTCATT+AGG + chr3.1:85727983-85728002 MS.gene014787:intron 35.0%
!! AAGACTTTTTGAGCGTCTTA+TGG + chr3.1:85726503-85726522 MS.gene014787:CDS 35.0%
!! AGATATTGATGACGATGAAG+AGG + chr3.1:85725264-85725283 MS.gene014787:CDS 35.0%
!! AGTTCTGAAGATGCAATTTG+TGG - chr3.1:85726850-85726869 None:intergenic 35.0%
!! AGTTTGCTTTTGACGTTTCT+TGG + chr3.1:85725044-85725063 MS.gene014787:CDS 35.0%
!! ATGACTGTTGTTTCTTCTAG+TGG + chr3.1:85726274-85726293 MS.gene014787:intron 35.0%
!! GTTTCTCAACTTGCTACATA+TGG + chr3.1:85727231-85727250 MS.gene014787:CDS 35.0%
!! GTTTGCTTTTGACGTTTCTT+GGG + chr3.1:85725045-85725064 MS.gene014787:CDS 35.0%
!! TGACTGTTGTTTCTTCTAGT+GGG + chr3.1:85726275-85726294 MS.gene014787:intron 35.0%
!!! GCTTTACCTTTTGGAATAGT+TGG - chr3.1:85725637-85725656 None:intergenic 35.0%
AAATGACATACAACCGTCAC+TGG + chr3.1:85723964-85723983 MS.gene014787:CDS 40.0%
AACACAGATTACATCTGAGG+AGG + chr3.1:85725922-85725941 MS.gene014787:intron 40.0%
AACTTACCCGTTTCATATGG+TGG + chr3.1:85724506-85724525 MS.gene014787:CDS 40.0%
AAGCAACACATTCCGAATCT+TGG + chr3.1:85729349-85729368 MS.gene014787:CDS 40.0%
AATGTAGAATACCACGTTGC+AGG + chr3.1:85729117-85729136 MS.gene014787:CDS 40.0%
ACACACATATCAGCAAGTAG+GGG - chr3.1:85724479-85724498 None:intergenic 40.0%
ACACATTTCAAAGAATGGCG+AGG + chr3.1:85728298-85728317 MS.gene014787:CDS 40.0%
ACTCGTGCTAGGAAAAAGAT+TGG - chr3.1:85724915-85724934 None:intergenic 40.0%
AGGACCATTGAAAAAGAGAG+CGG + chr3.1:85727673-85727692 MS.gene014787:CDS 40.0%
AGGTAATTGAAAACACTGGC+AGG - chr3.1:85725574-85725593 None:intergenic 40.0%
ATCCCATTGGGTGACTATAA+AGG - chr3.1:85727849-85727868 None:intergenic 40.0%
ATGGACTTTCCCATTGAAGT+AGG - chr3.1:85724830-85724849 None:intergenic 40.0%
CACACACATATCAGCAAGTA+GGG - chr3.1:85724480-85724499 None:intergenic 40.0%
CACGAGTTCATGCTTAGAAT+TGG + chr3.1:85724928-85724947 MS.gene014787:CDS 40.0%
CAGTAGTCTCCATCAAAGTA+TGG - chr3.1:85727628-85727647 None:intergenic 40.0%
CATACTTTGATGGAGACTAC+TGG + chr3.1:85727626-85727645 MS.gene014787:CDS 40.0%
CCAAAAGATATTGCCTACCA+GGG + chr3.1:85728010-85728029 MS.gene014787:CDS 40.0%
CCAAATATTCCCACCAAGTT+CGG - chr3.1:85723817-85723836 None:intergenic 40.0%
CCAACCTAATGAAAATTGGG+GGG - chr3.1:85727990-85728009 None:intergenic 40.0%
CCACATGTAAGTAATCCAGT+AGG + chr3.1:85723912-85723931 MS.gene014787:CDS 40.0%
CCAGAGTAGGGTTGTTTAAA+TGG - chr3.1:85728587-85728606 None:intergenic 40.0%
CCATATGAAACGGGTAAGTT+AGG - chr3.1:85724506-85724525 None:intergenic 40.0%
CCATTATTTGCGTGTTTCAG+AGG - chr3.1:85724575-85724594 None:intergenic 40.0%
CCATTTAAACAACCCTACTC+TGG + chr3.1:85728584-85728603 MS.gene014787:CDS 40.0%
CCTAACTTACCCGTTTCATA+TGG + chr3.1:85724503-85724522 MS.gene014787:CDS 40.0%
CCTACTGGATTACTTACATG+TGG - chr3.1:85723915-85723934 None:intergenic 40.0%
CGATTCCCAAATTGACATAG+TGG - chr3.1:85728786-85728805 None:intergenic 40.0%
CTACTGGTGTGGTTATGTTA+TGG + chr3.1:85727642-85727661 MS.gene014787:CDS 40.0%
CTTATAGCAAGCAGAGCAAA+TGG - chr3.1:85728691-85728710 None:intergenic 40.0%
CTTCTGTTTCAGCAGATTGA+AGG + chr3.1:85726918-85726937 MS.gene014787:CDS 40.0%
GAACAGTTTGGATAAGAGCA+TGG - chr3.1:85728975-85728994 None:intergenic 40.0%
GAGAAAGAAAGACTGACCAA+CGG - chr3.1:85727343-85727362 None:intergenic 40.0%
GATCTATAAGAGAATTCGGC+AGG - chr3.1:85726786-85726805 None:intergenic 40.0%
GCAAACTGGGAAAAAGTTGA+AGG + chr3.1:85726534-85726553 MS.gene014787:CDS 40.0%
GCATGGTTCAGTATTAGTTG+CGG - chr3.1:85728958-85728977 None:intergenic 40.0%
GCCAACCTAATGAAAATTGG+GGG - chr3.1:85727991-85728010 None:intergenic 40.0%
GCCAGCACTGTAAAAAGATA+TGG + chr3.1:85729054-85729073 MS.gene014787:CDS 40.0%
GGAAGAAGAATTTGATGCAC+AGG + chr3.1:85726066-85726085 MS.gene014787:CDS 40.0%
GGCAGGTCATGAAGAATAAA+AGG - chr3.1:85724428-85724447 None:intergenic 40.0%
GGCCAACCTAATGAAAATTG+GGG - chr3.1:85727992-85728011 None:intergenic 40.0%
GTTATTATGGCGTTCCAGAA+GGG + chr3.1:85724390-85724409 MS.gene014787:CDS 40.0%
TAATTGAAAACACTGGCAGG+TGG - chr3.1:85725571-85725590 None:intergenic 40.0%
TACTGAAAAAGGGAACTCCA+AGG + chr3.1:85727585-85727604 MS.gene014787:CDS 40.0%
TATGGAAGAGAGAGCAAACT+GGG + chr3.1:85726521-85726540 MS.gene014787:CDS 40.0%
TATTGTTCATGAGGGTGAAG+AGG + chr3.1:85725345-85725364 MS.gene014787:CDS 40.0%
TCCCATTGGGTGACTATAAA+GGG - chr3.1:85727848-85727867 None:intergenic 40.0%
TCCCTTTATAGTCACCCAAT+GGG + chr3.1:85727844-85727863 MS.gene014787:intron 40.0%
TCTCGTTTGCCATACTTTGA+TGG + chr3.1:85727616-85727635 MS.gene014787:CDS 40.0%
TCTGAGAAAGGAATCTGTTC+AGG + chr3.1:85725537-85725556 MS.gene014787:CDS 40.0%
TCTTTGGCAGTGTCTTTAGA+AGG - chr3.1:85727769-85727788 None:intergenic 40.0%
TGCTACAACCTACGAAAAGA+CGG + chr3.1:85725011-85725030 MS.gene014787:CDS 40.0%
TGGATTACTTACATGTGGAC+TGG - chr3.1:85723910-85723929 None:intergenic 40.0%
TTAAGTTCCTTCCTGAGAGT+AGG - chr3.1:85725244-85725263 None:intergenic 40.0%
TTATGGAAGAGAGAGCAAAC+TGG + chr3.1:85726520-85726539 MS.gene014787:CDS 40.0%
TTCCCTTTATAGTCACCCAA+TGG + chr3.1:85727843-85727862 MS.gene014787:intron 40.0%
TTGCATCACCAGAATGTCTT+TGG - chr3.1:85727785-85727804 None:intergenic 40.0%
TTGCTTCCACCATATGAAAC+GGG - chr3.1:85724515-85724534 None:intergenic 40.0%
! AGCTATGATGAAGTTTTCCC+TGG - chr3.1:85728030-85728049 None:intergenic 40.0%
! ATGATGAAGTTTTCCCTGGT+AGG - chr3.1:85728026-85728045 None:intergenic 40.0%
! ATGTGTACACAACGCTGATT+TGG - chr3.1:85727002-85727021 None:intergenic 40.0%
! CATGGTAAACAAAGGTACGA+AGG - chr3.1:85727085-85727104 None:intergenic 40.0%
! GCACCAAAATTAGCAGCTTT+TGG - chr3.1:85726441-85726460 None:intergenic 40.0%
! GTGACGGTTGTATGTCATTT+CGG - chr3.1:85723964-85723983 None:intergenic 40.0%
! TCTTTTCGTAGGTTGTAGCA+TGG - chr3.1:85725011-85725030 None:intergenic 40.0%
! TGACGGTTGTATGTCATTTC+GGG - chr3.1:85723963-85723982 None:intergenic 40.0%
! TTCATATGGTGGAAGCAATC+TGG + chr3.1:85724517-85724536 MS.gene014787:CDS 40.0%
! TTCTGAAAATCCAACTCCTG+GGG - chr3.1:85724974-85724993 None:intergenic 40.0%
! TTTTCTACGAATTTGGCAGG+AGG + chr3.1:85724295-85724314 MS.gene014787:intron 40.0%
!! CATTTGCTCTGCTTGCTATA+AGG + chr3.1:85728689-85728708 MS.gene014787:CDS 40.0%
!! CCTCTGAAACACGCAAATAA+TGG + chr3.1:85724572-85724591 MS.gene014787:CDS 40.0%
!! GTCATTTTCCGTCTTTTCGT+AGG - chr3.1:85725022-85725041 None:intergenic 40.0%
!! GTTCTGAAAATCCAACTCCT+GGG - chr3.1:85724975-85724994 None:intergenic 40.0%
!! TCTGCTTGCTATAAGGATAG+AGG + chr3.1:85728696-85728715 MS.gene014787:CDS 40.0%
!! TGTTCTGAAAATCCAACTCC+TGG - chr3.1:85724976-85724995 None:intergenic 40.0%
!!! AGCTGCTAATTTTGGTGCTA+AGG + chr3.1:85726443-85726462 MS.gene014787:CDS 40.0%
!!! ATTTGCTACTTTTGCAGTGG+AGG + chr3.1:85724742-85724761 MS.gene014787:intron 40.0%
!!! TTGGAGTTCCCTTTTTCAGT+AGG - chr3.1:85727586-85727605 None:intergenic 40.0%
!!! TTGGATTGTGTGCTGTTTTC+AGG + chr3.1:85728401-85728420 MS.gene014787:intron 40.0%
ACACATATCAGCAAGTAGGG+GGG - chr3.1:85724477-85724496 None:intergenic 45.0%
ACCATTGAAAAAGAGAGCGG+AGG + chr3.1:85727676-85727695 MS.gene014787:CDS 45.0%
AGAATGATAAGCTACGCCGT+TGG + chr3.1:85727324-85727343 MS.gene014787:CDS 45.0%
AGACACTGCCAAAGACATTC+TGG + chr3.1:85727774-85727793 MS.gene014787:CDS 45.0%
AGCTATTCTCTCATGCTCGT+AGG + chr3.1:85729006-85729025 MS.gene014787:CDS 45.0%
AGTCTTTGCAATTCCTGGAG+TGG - chr3.1:85729094-85729113 None:intergenic 45.0%
ATTACATCTGAGGAGGAAGC+AGG + chr3.1:85725929-85725948 MS.gene014787:CDS 45.0%
CAAACGAGAAGTTGTCACCT+TGG - chr3.1:85727605-85727624 None:intergenic 45.0%
CACACATATCAGCAAGTAGG+GGG - chr3.1:85724478-85724497 None:intergenic 45.0%
CAGTTAGAGACTATCGAGTC+TGG + chr3.1:85725148-85725167 MS.gene014787:CDS 45.0%
CCACTCTTTGTTCTTCTCTC+AGG - chr3.1:85727056-85727075 None:intergenic 45.0%
CCAGATTCTAAGCCTTTCGA+GGG - chr3.1:85725181-85725200 None:intergenic 45.0%
CCTGAGAGAAGAACAAAGAG+TGG + chr3.1:85727053-85727072 MS.gene014787:CDS 45.0%
CCTGTGCTCCTTCAAGAAAA+GGG + chr3.1:85727255-85727274 MS.gene014787:CDS 45.0%
CGGCGTAGCTTATCATTCTT+CGG - chr3.1:85727323-85727342 None:intergenic 45.0%
CTCCAGGAATTGCAAAGACT+CGG + chr3.1:85729094-85729113 MS.gene014787:CDS 45.0%
CTGTGCTCCTTCAAGAAAAG+GGG + chr3.1:85727256-85727275 MS.gene014787:CDS 45.0%
GACGATGAAGAGGACATACA+AGG + chr3.1:85725274-85725293 MS.gene014787:CDS 45.0%
GCACACACATATCAGCAAGT+AGG - chr3.1:85724481-85724500 None:intergenic 45.0%
GCAGAGCAAATGGTACATTC+TGG - chr3.1:85728681-85728700 None:intergenic 45.0%
GCAGGAGGAATATATGAACC+TGG + chr3.1:85724310-85724329 MS.gene014787:intron 45.0%
GCCAAAAGATATTGCCTACC+AGG + chr3.1:85728009-85728028 MS.gene014787:CDS 45.0%
GGTTATTATGGCGTTCCAGA+AGG + chr3.1:85724389-85724408 MS.gene014787:CDS 45.0%
GTCTTTGCAATTCCTGGAGT+GGG - chr3.1:85729093-85729112 None:intergenic 45.0%
GTTATGTTATGGAAGCAGCC+AGG + chr3.1:85727653-85727672 MS.gene014787:CDS 45.0%
TAATCCAGTAGGATTCCCCA+CGG + chr3.1:85723923-85723942 MS.gene014787:CDS 45.0%
TATCCCATCCTGGTTGAATC+CGG - chr3.1:85725386-85725405 None:intergenic 45.0%
TCTAAGCATGAACTCGTGCT+AGG - chr3.1:85724926-85724945 None:intergenic 45.0%
TGGAACGCCATAATAACCAG+CGG - chr3.1:85724387-85724406 None:intergenic 45.0%
TTATACTAACTGCCCACTCC+AGG + chr3.1:85729078-85729097 MS.gene014787:CDS 45.0%
TTCCAACAGTCACCAGAGTA+GGG - chr3.1:85728599-85728618 None:intergenic 45.0%
TTCCGAGTCTTTGCAATTCC+TGG - chr3.1:85729099-85729118 None:intergenic 45.0%
TTCTAAGTGGTCACTGAGCA+TGG - chr3.1:85726481-85726500 None:intergenic 45.0%
TTGATGAATACTTGGCACGG+CGG - chr3.1:85728551-85728570 None:intergenic 45.0%
TTTCCAACAGTCACCAGAGT+AGG - chr3.1:85728600-85728619 None:intergenic 45.0%
TTTGATGGAGACTACTGGTG+TGG + chr3.1:85727631-85727650 MS.gene014787:CDS 45.0%
! ACTTACCACTGCTGCTTCAA+AGG + chr3.1:85724157-85724176 MS.gene014787:CDS 45.0%
! CCCCCCAATTTTCATTAGGT+TGG + chr3.1:85727987-85728006 MS.gene014787:intron 45.0%
! CCCTGGTAGGCAATATCTTT+TGG - chr3.1:85728013-85728032 None:intergenic 45.0%
! CCGAACTTGGTGGGAATATT+TGG + chr3.1:85723814-85723833 MS.gene014787:CDS 45.0%
! GGCAGTGTCTTTAGAAGGAT+TGG - chr3.1:85727764-85727783 None:intergenic 45.0%
! GTTGCTACTTGATCTGGTGT+TGG - chr3.1:85724546-85724565 None:intergenic 45.0%
! GTTTCTGGACATCATTCCAG+AGG + chr3.1:85726752-85726771 MS.gene014787:CDS 45.0%
! TCTGATGCCGCTGGTTATTA+TGG + chr3.1:85724377-85724396 MS.gene014787:CDS 45.0%
! TCTGGAATGATTCCCTCGAA+AGG + chr3.1:85725166-85725185 MS.gene014787:CDS 45.0%
! TTCGGAGTCTTTTGCTCTTC+AGG - chr3.1:85727305-85727324 None:intergenic 45.0%
!! ACAAACCTTTGAAGCAGCAG+TGG - chr3.1:85724165-85724184 None:intergenic 45.0%
!! CTGATTTGGATTGCCGCATT+CGG - chr3.1:85726988-85727007 None:intergenic 45.0%
!!! CATTTTTGGAATGTACGCCC+AGG + chr3.1:85726953-85726972 MS.gene014787:CDS 45.0%
!!! GCTCTCTTTTTCAATGGTCC+TGG - chr3.1:85727674-85727693 None:intergenic 45.0%
!!! TCCTCCGCTCTCTTTTTCAA+TGG - chr3.1:85727680-85727699 None:intergenic 45.0%
AACCCTACTCTGGTGACTGT+TGG + chr3.1:85728594-85728613 MS.gene014787:CDS 50.0%
ACACATTCCGAATCTTGGCG+TGG + chr3.1:85729354-85729373 MS.gene014787:CDS 50.0%
ACAGTAACACACCTGCAACG+TGG - chr3.1:85729131-85729150 None:intergenic 50.0%
AGAACCGGATTCAACCAGGA+TGG + chr3.1:85725379-85725398 MS.gene014787:CDS 50.0%
AGAACTGGATTCATCCAGGC+GGG + chr3.1:85725298-85725317 MS.gene014787:CDS 50.0%
AGGCAGAACTGGATTCATCC+AGG + chr3.1:85725294-85725313 MS.gene014787:CDS 50.0%
CAGAACTGGATTCATCCAGG+CGG + chr3.1:85725297-85725316 MS.gene014787:CDS 50.0%
CCCTCGAAAGGCTTAGAATC+TGG + chr3.1:85725178-85725197 MS.gene014787:CDS 50.0%
CGAGGTGCATACACTATGTC+AGG + chr3.1:85728316-85728335 MS.gene014787:CDS 50.0%
GAACCATCATCAGGAGAGCA+AGG - chr3.1:85724449-85724468 None:intergenic 50.0%
GAACCGGATTCAACCAGGAT+GGG + chr3.1:85725380-85725399 MS.gene014787:CDS 50.0%
GAGGACATACAAGGCAGAAC+TGG + chr3.1:85725283-85725302 MS.gene014787:CDS 50.0%
GAGGACATTCAAGGCAGAAC+CGG + chr3.1:85725364-85725383 MS.gene014787:CDS 50.0%
GAGGGTGAAGAGGACATTCA+AGG + chr3.1:85725355-85725374 MS.gene014787:CDS 50.0%
GCCAGATTCTAAGCCTTTCG+AGG - chr3.1:85725182-85725201 None:intergenic 50.0%
GCCTGTGCTCCTTCAAGAAA+AGG + chr3.1:85727254-85727273 MS.gene014787:CDS 50.0%
GCGAAATAAACCCCAGGAGT+TGG + chr3.1:85724961-85724980 MS.gene014787:CDS 50.0%
GTTTCTAAGTCTGATGCCGC+TGG + chr3.1:85724368-85724387 MS.gene014787:CDS 50.0%
TACAGGGCGAAATAAACCCC+AGG + chr3.1:85724955-85724974 MS.gene014787:CDS 50.0%
TCAACAGTAGGCCTACTCTC+AGG + chr3.1:85725230-85725249 MS.gene014787:CDS 50.0%
TGAGCAATTTGCCCCTATGC+TGG + chr3.1:85724124-85724143 MS.gene014787:CDS 50.0%
TGGTCACTGAGCATGGTTCT+TGG - chr3.1:85726474-85726493 None:intergenic 50.0%
! AGAAGGATTGGCATGTCCCA+TGG - chr3.1:85727752-85727771 None:intergenic 50.0%
! CAGCGTATGCAAGCTCTAGT+GGG + chr3.1:85724344-85724363 MS.gene014787:CDS 50.0%
! TCAGCGTATGCAAGCTCTAG+TGG + chr3.1:85724343-85724362 MS.gene014787:CDS 50.0%
! TCGGCAGGGTAATTTTCCTC+TGG - chr3.1:85726771-85726790 None:intergenic 50.0%
! TGCCATGAAGTGATAGCGTC+TGG + chr3.1:85728074-85728093 MS.gene014787:CDS 50.0%
! TTTTAGCATTTACCCCCGCC+TGG - chr3.1:85725315-85725334 None:intergenic 50.0%
!! CCCTTTTCTTGAAGGAGCAC+AGG - chr3.1:85727258-85727277 None:intergenic 50.0%
!! GGGGTTGATGAACCATCATC+AGG - chr3.1:85724458-85724477 None:intergenic 50.0%
!! TACGCTGATTCAACGTCTCC+AGG - chr3.1:85724331-85724350 None:intergenic 50.0%
AACTGGATTCATCCAGGCGG+GGG + chr3.1:85725300-85725319 MS.gene014787:CDS 55.0%
AGGCAGAACCGGATTCAACC+AGG + chr3.1:85725375-85725394 MS.gene014787:CDS 55.0%
CACGCAGATGCTGAAACTGC+TGG + chr3.1:85728905-85728924 MS.gene014787:intron 55.0%
CAGTAGGCCTACTCTCAGGA+AGG + chr3.1:85725234-85725253 MS.gene014787:CDS 55.0%
CATCATCAGGAGAGCAAGGC+AGG - chr3.1:85724445-85724464 None:intergenic 55.0%
CATGTTGTGGCGTACGCATC+AGG + chr3.1:85726023-85726042 MS.gene014787:CDS 55.0%
CTGCCTTGCTCTCCTGATGA+TGG + chr3.1:85724443-85724462 MS.gene014787:CDS 55.0%
CTTGGGAAGGGTTCCGAACT+TGG + chr3.1:85723801-85723820 MS.gene014787:CDS 55.0%
GAACTGGATTCATCCAGGCG+GGG + chr3.1:85725299-85725318 MS.gene014787:CDS 55.0%
GCATTCGGAGCCAAACTCCT+GGG - chr3.1:85726973-85726992 None:intergenic 55.0%
GGAAGGGTTCCGAACTTGGT+GGG + chr3.1:85723805-85723824 MS.gene014787:CDS 55.0%
GGAATGTACGCCCAGGAGTT+TGG + chr3.1:85726960-85726979 MS.gene014787:CDS 55.0%
GGGTCAGATAGTCTCCCTTC+TGG - chr3.1:85724407-85724426 None:intergenic 55.0%
TGCAGCTCCACGCCAAGATT+CGG - chr3.1:85729364-85729383 None:intergenic 55.0%
! CAGGAGTTTGGCTCCGAATG+CGG + chr3.1:85726972-85726991 MS.gene014787:CDS 55.0%
! GATGATAACGCCAGTCCGTG+GGG - chr3.1:85723941-85723960 None:intergenic 55.0%
! GGATGATAACGCCAGTCCGT+GGG - chr3.1:85723942-85723961 None:intergenic 55.0%
CAGTAGGATTCCCCACGGAC+TGG + chr3.1:85723928-85723947 MS.gene014787:CDS 60.0%
CAGTCCGTGGGGAATCCTAC+TGG - chr3.1:85723930-85723949 None:intergenic 60.0%
CGCATTCGGAGCCAAACTCC+TGG - chr3.1:85726974-85726993 None:intergenic 60.0%
GGGAAGGGTTCCGAACTTGG+TGG + chr3.1:85723804-85723823 MS.gene014787:CDS 60.0%
! GGGATGATAACGCCAGTCCG+TGG - chr3.1:85723943-85723962 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 85723798 85729419 85723798 ID=MS.gene014787
chr3.1 mRNA 85723798 85729419 85723798 ID=MS.gene014787.t1;Parent=MS.gene014787
chr3.1 exon 85723798 85724000 85723798 ID=MS.gene014787.t1.exon1;Parent=MS.gene014787.t1
chr3.1 CDS 85723798 85724000 85723798 ID=cds.MS.gene014787.t1;Parent=MS.gene014787.t1
chr3.1 exon 85724106 85724178 85724106 ID=MS.gene014787.t1.exon2;Parent=MS.gene014787.t1
chr3.1 CDS 85724106 85724178 85724106 ID=cds.MS.gene014787.t1;Parent=MS.gene014787.t1
chr3.1 exon 85724314 85724593 85724314 ID=MS.gene014787.t1.exon3;Parent=MS.gene014787.t1
chr3.1 CDS 85724314 85724593 85724314 ID=cds.MS.gene014787.t1;Parent=MS.gene014787.t1
chr3.1 exon 85724759 85725558 85724759 ID=MS.gene014787.t1.exon4;Parent=MS.gene014787.t1
chr3.1 CDS 85724759 85725558 85724759 ID=cds.MS.gene014787.t1;Parent=MS.gene014787.t1
chr3.1 exon 85725929 85726207 85725929 ID=MS.gene014787.t1.exon5;Parent=MS.gene014787.t1
chr3.1 CDS 85725929 85726207 85725929 ID=cds.MS.gene014787.t1;Parent=MS.gene014787.t1
chr3.1 exon 85726294 85726575 85726294 ID=MS.gene014787.t1.exon6;Parent=MS.gene014787.t1
chr3.1 CDS 85726294 85726575 85726294 ID=cds.MS.gene014787.t1;Parent=MS.gene014787.t1
chr3.1 exon 85726681 85726809 85726681 ID=MS.gene014787.t1.exon7;Parent=MS.gene014787.t1
chr3.1 CDS 85726681 85726809 85726681 ID=cds.MS.gene014787.t1;Parent=MS.gene014787.t1
chr3.1 exon 85726912 85727112 85726912 ID=MS.gene014787.t1.exon8;Parent=MS.gene014787.t1
chr3.1 CDS 85726912 85727112 85726912 ID=cds.MS.gene014787.t1;Parent=MS.gene014787.t1
chr3.1 exon 85727200 85727345 85727200 ID=MS.gene014787.t1.exon9;Parent=MS.gene014787.t1
chr3.1 CDS 85727200 85727345 85727200 ID=cds.MS.gene014787.t1;Parent=MS.gene014787.t1
chr3.1 exon 85727504 85727807 85727504 ID=MS.gene014787.t1.exon10;Parent=MS.gene014787.t1
chr3.1 CDS 85727504 85727807 85727504 ID=cds.MS.gene014787.t1;Parent=MS.gene014787.t1
chr3.1 exon 85728005 85728144 85728005 ID=MS.gene014787.t1.exon11;Parent=MS.gene014787.t1
chr3.1 CDS 85728005 85728144 85728005 ID=cds.MS.gene014787.t1;Parent=MS.gene014787.t1
chr3.1 exon 85728280 85728337 85728280 ID=MS.gene014787.t1.exon12;Parent=MS.gene014787.t1
chr3.1 CDS 85728280 85728337 85728280 ID=cds.MS.gene014787.t1;Parent=MS.gene014787.t1
chr3.1 exon 85728423 85728824 85728423 ID=MS.gene014787.t1.exon13;Parent=MS.gene014787.t1
chr3.1 CDS 85728423 85728824 85728423 ID=cds.MS.gene014787.t1;Parent=MS.gene014787.t1
chr3.1 exon 85728912 85729138 85728912 ID=MS.gene014787.t1.exon14;Parent=MS.gene014787.t1
chr3.1 CDS 85728912 85729138 85728912 ID=cds.MS.gene014787.t1;Parent=MS.gene014787.t1
chr3.1 exon 85729323 85729419 85729323 ID=MS.gene014787.t1.exon15;Parent=MS.gene014787.t1
chr3.1 CDS 85729323 85729419 85729323 ID=cds.MS.gene014787.t1;Parent=MS.gene014787.t1
Gene Sequence

>MS.gene014787

ATGCTTGGGAAGGGTTCCGAACTTGGTGGGAATATTTGGAGAGAATTGCCAAGAAATTCTTCATCAGTTGTCTCAAACACTCCGCAAAAGAGATGTTTTGATAAATTATCCAGTCCACATGTAAGTAATCCAGTAGGATTCCCCACGGACTGGCGTTATCATCCCGAAATGACATACAACCGTCACTGGATAAGAAAAAGAATGTAGGTGAAAGTGATTTAATTTTCATAGAAATTTTGTTGCTTGCATTTGCTTCAACTTAAGATTGCAATTGAATCGAGATTATACTAACTATAAATTTTATTCAGTTTTGAAATCGTTCAGAATGAGCAATTTGCCCCTATGCTGGAATTATTACTACTTACCACTGCTGCTTCAAAGGTTTGTTTCTTGAAATGTCGTGTCTGAACATAAAGTGCTTTTTTTTTGCTAATAACACTTGCATATAATAGTATAAAATGCAAACTATACCTGTATTCTGTCAATTAAGCAGTTGTTTTTCTACGAATTTGGCAGGAGGAATATATGAACCTGGAGACGTTGAATCAGCGTATGCAAGCTCTAGTGGGTGTTTCTAAGTCTGATGCCGCTGGTTATTATGGCGTTCCAGAAGGGAGACTATCTGACCCTTTTATTCTTCATGACCTGCCTTGCTCTCCTGATGATGGTTCATCAACCCCCCTACTTGCTGATATGTGTGTGCTTCCTAACTTACCCGTTTCATATGGTGGAAGCAATCTGGATGCCAACACCAGATCAAGTAGCAACTATTTTCCTCTGAAACACGCAAATAATGGTATGTTTAAATTAGACTGCGATTTCGCCCCAATTTTTAATCCTTATTCGTGCAACATTGATTTTGTCTTTGCATATTACCGACTTTGAGCTTCTTTCTTTGCTTGAATTATTTTTGTTTTTAACAAATGCATTGCTTTACCCATTTAATTTGCTACTTTTGCAGTGGAGGTGAATCTGTCAAAACAGAGAGATTGTTTGGGGTTTATCCAGAATAACGAGTCTATGAGTTTTCCTACTTCAATGGGAAAGTCCATTCAATTTGAAGATTTACATTCGACATTCCCTAAACTTGTTTCAGCGGATATTTCGGAACAATCCAATCTTTTTCCTAGCACGAGTTCATGCTTAGAATTGGAAGATACAGGGCGAAATAAACCCCAGGAGTTGGATTTTCAGAACAGTTTCACTCATGCCATGCTACAACCTACGAAAAGACGGAAAATGACGGAGTTTGCTTTTGACGTTTCTTGGGTTAATGATGCAAGTTCTGATCAATCGACTTACAAGATGGCTCAACCTTGTTCTTTTGAAACACTTTCAGAAGTGCAGCAACAGTTAGAGACTATCGAGTCTGGAATGATTCCCTCGAAAGGCTTAGAATCTGGCATGAAATACAGCAGAAACTCAATGGAAATCAACAGTAGGCCTACTCTCAGGAAGGAACTTAAAGATATTGATGACGATGAAGAGGACATACAAGGCAGAACTGGATTCATCCAGGCGGGGGTAAATGCTAAAAAAGAACTTATTATTGTTCATGAGGGTGAAGAGGACATTCAAGGCAGAACCGGATTCAACCAGGATGGGATAAACGATAAAAAAGAAATCATCGAGTCAAAAGATGATCAAGAGAAGCAAACAAAATCCCCAAATACAATAATTGAGGCTGTTTCCTTGATTGATTTGTTCACACGTGATCAAATAGAAGAACATATTAGTAGTCTGAGAAAGGAATCTGTTCAGGTTAGTACACCACCTGCCAGTGTTTTCAATTACCTTGATCTGTTTACGTATGACTGTTATGATTTATGTCATGAACCAACTATTCCAAAAGGTAAAGCTATTTGGTTAAAGCTCATGAATGGTTCTTCTTTTAATCATTGGATGTTATGTATGCATGTTATCGTGAAACTTTGAATGTCTGTATTTGCGTGCATGCTCAGCTGACAGATTTTATTTACATTTGTCAATTTCTGCAACAAAAAAAAAAAAAATTTAGTTTGTGATTTTTGTTAAAATTACATTTTCTATTTCTGCAATTTACATATATACATATTTCTTTTTGCTTTTGAATTTTTAAGCCATATAGAAGTTAACAATTCTATTAACACAGATTACATCTGAGGAGGAAGCAGGAATTGATGCAAACACATGCCAATTATGTCAAAGGAAAAAGCTTTACTTTGCACCAGTGCCAATTTTTTGTTCATGTTGTGGCGTACGCATCAGGAGAACCTATTTTTGTAGAAAGGAAGAAGAATTTGATGCACAGGGTTGCATTTGCACCGTGTGTTATAAGAATTCTAAAGGTGGGAAAATTACATTCAATGGGGCATTTGTTTCTAAGACAAATCTCGAAAAAAAGAATAACGATGAAGTTTTTGAAGAACCTGTAAGTTTCAATATCGATTACTATATAATTCAGCTTGATATGCAGAGAACTATATACTAACTCTTTATGACTGTTGTTTCTTCTAGTGGGTTGAATGCAATAAATGCAAAAGATGGCAGCATCAAATATGTGCACTCTACAACAACAAAAGAGATTTGGATTGCAGTGCTGAGTATATATGTCCTGTATGCCGCTTAAAAGAAATTAAAAACGGAATTCATGTTCCTTTACCAAAAGCTGCTAATTTTGGTGCTAAGGACTTGCCAAGAACCATGCTCAGTGACCACTTAGAAAAAAGACTTTTTGAGCGTCTTATGGAAGAGAGAGCAAACTGGGAAAAAGTTGAAGGGAATGAGAATCTTGATAAGGTAATACTGAGAAATCAGCATGTATGCACATTAACTTCAAATATATATTGATTTGAAAATTCTAGATTATTTACGTATGTGCCTTGAATTTCTGCAAAATTGTAGGTTTCAGCAGCAGAAAGTCTTTCTATTAGAGAAGTGTTATCTGTCGACAAACAATTGAAAGTGAATAAGCTGTTTCTGGACATCATTCCAGAGGAAAATTACCCTGCCGAATTCTCTTATAGATCAAGAGTAAGTTCAGTGGTTTATTATTGAATAAATAAATATACCACAAATTGCATCTTCAGAACTAAATTTCTCTTGATGTCTACTCTATTATGTCTGTATTTTCAGGTTATTCTTCTGTTTCAGCAGATTGAAGGAGTAGATATATGCATTTTTGGAATGTACGCCCAGGAGTTTGGCTCCGAATGCGGCAATCCAAATCAGCGTTGTGTACACATTTCATATCTTGATTCTGTCAAGTATTTTAGGCCTGAGAGAAGAACAAAGAGTGGAGAAGCCCTTCGTACCTTTGTTTACCATGAGATATTGGTATTTTTCTTTTTAAACTCTTTCTATGGCAATAGAACTAATAAAATTCCATTCTTTCTATTTATGTTTTATCCTTCCTATCATCAGATTGGATACCTTGATTTTTGTAAGAAACGGGGTTTCTCAACTTGCTACATATGGGCCTGTGCTCCTTCAAGAAAAGGGGATGATTATATACTATATTGTCATCCTGAAGAGCAAAAGACTCCGAAGAATGATAAGCTACGCCGTTGGTCAGTCTTTCTTTCTCCTTATGTGTCTCTGTGTTGAATTTTGTGAGCTACATTACATTGAGAATTTGAGAGTACATTTTCCTTCTTTTATCTTCTTTGTTTTCGATAACTAGTACTGCCATGTAACCACTGAATCTTTATATTGTTTGTTTATGCAGGTATCTTTCTATGATAAAAAAGGCTACTGAAGAAAATATTATTGTTGGTTTAACCAACGTATATGATCATTTCTTTGTTCCTACTGAAAAAGGGAACTCCAAGGTGACAACTTCTCGTTTGCCATACTTTGATGGAGACTACTGGTGTGGTTATGTTATGGAAGCAGCCAGGACCATTGAAAAAGAGAGCGGAGGAGACTATGAAAAGATGTTGAAGAAACAAGTGCCAAATAGAGCTTTAAAGACCATGGGACATGCCAATCCTTCTAAAGACACTGCCAAAGACATTCTGGTGATGCAAAAAGTATGTCTACCTTGTCTTTTACTTTCATCAACGTCTTCCCTTTATAGTCACCCAATGGGATATATTCTTTTATACTTGAGTGAATGAAACGTTGCAATGTTCTTATTATAGACCAGTTTAAGTTATTTACATGATATGTCAGTATATGTGTAATATGAACCTTCTTCCTTTTCTTTTTTCCCCCCAATTTTCATTAGGTTGGCCAAAAGATATTGCCTACCAGGGAAAACTTCATCATAGCTCACTTGCAGTATTCATGCATGCACTGCCATGAAGTGATAGCGTCTGGGAAGCGATGGTTTTGCACTGAATGCAAGAAATTTCAGGAGTGTGAAAGGTATGATAACTTAAATACATATTTGAACTGTTTGTTTTTCACCTCCCTTTGAAATGAATACATACTTGAACTGGTTTTGCATTGAGTGCAATAAAAAAGGCTTTTTTGATTGACTTTCATATCAACATATTTCAGATGCCATAGTTCTGATGCACACATTTCAAAGAATGGCGAGGTGCATACACTATGTCAGGTAACAACCTAAACCTGAAGTTTTCATATGATTTTCTCATCATTAGTAATTTCATGCAAAACATTGGATTGTGTGCTGTTTTCAGGCTGTTGTTGATGATATTCCCTCCAACACTAAGCATAATGATATCATCCTTGAGAGTGGATTATTTGAAAATAGGAACAGCCTTTTGAGTTTTTGCCAGAAGTATCAATTTCAGTTTGACATACTCCGCCGTGCCAAGTATTCATCAATGATGATCCTCTACCATTTAAACAACCCTACTCTGGTGACTGTTGGAAAATGTAGCATTTGTTATGCACACAATATATTTCAAAAGTGCTGGAAATGTGAGATTTGTCCAGAATGTACCATTTGCTCTGCTTGCTATAAGGATAGAGGTGCTAACTGCCATGAACACAAGTTGACTCAAAATGAACTCACATTGACTCAAAATTATTCAACACCACTATGTCAATTTGGGAATCGTGAGTCAAATGAGAAAACGGTATGAACTTAATTCTCAGGATTTACTGTTTTCATTACTCGATTGTTTTTTATTATTGTTCATATTTGCTGACTTACACACACGCAGATGCTGAAACTGCTGGATGTTTTGAAGCATGCATCTCAATGTTCCGCAACTAATACTGAACCATGCTCTTATCCAAACTGTTCTCAAATCAAGAAGCTATTCTCTCATGCTCGTAGGTGCAAAATTCGAGTAAATCGGGGATGCCAGCACTGTAAAAAGATATGGTTTATACTAACTGCCCACTCCAGGAATTGCAAAGACTCGGAATGTAGAATACCACGTTGCAGGTGTGTTACTGTTAGAATTCTACACTACCTATAGAATTTGAGAGAATTTGGATATTCTCCTTTCTGATTTATTCTTTGGCTAAAGTATATGCATAAATCTACTTATTCCTTTCACAACAGTCATTTTTTTGTGGCTAAACTATGCATAAATACCTATTTCTTTATATTTATTTTGATTTTGCAGGGATCTGAAGAAGCATATAGAATCGAAAGCAACACATTCCGAATCTTGGCGTGGAGCTGCAGTTATTGAAAGCGACACAGCAGTCGTTGATCAATGA
Protein sequence

>MS.gene014787.t1

MLGKGSELGGNIWRELPRNSSSVVSNTPQKRCFDKLSSPHVSNPVGFPTDWRYHPEMTYNRHWIRKRIFEIVQNEQFAPMLELLLLTTAASKEEYMNLETLNQRMQALVGVSKSDAAGYYGVPEGRLSDPFILHDLPCSPDDGSSTPLLADMCVLPNLPVSYGGSNLDANTRSSSNYFPLKHANNVEVNLSKQRDCLGFIQNNESMSFPTSMGKSIQFEDLHSTFPKLVSADISEQSNLFPSTSSCLELEDTGRNKPQELDFQNSFTHAMLQPTKRRKMTEFAFDVSWVNDASSDQSTYKMAQPCSFETLSEVQQQLETIESGMIPSKGLESGMKYSRNSMEINSRPTLRKELKDIDDDEEDIQGRTGFIQAGVNAKKELIIVHEGEEDIQGRTGFNQDGINDKKEIIESKDDQEKQTKSPNTIIEAVSLIDLFTRDQIEEHISSLRKESVQITSEEEAGIDANTCQLCQRKKLYFAPVPIFCSCCGVRIRRTYFCRKEEEFDAQGCICTVCYKNSKGGKITFNGAFVSKTNLEKKNNDEVFEEPWVECNKCKRWQHQICALYNNKRDLDCSAEYICPVCRLKEIKNGIHVPLPKAANFGAKDLPRTMLSDHLEKRLFERLMEERANWEKVEGNENLDKVSAAESLSIREVLSVDKQLKVNKLFLDIIPEENYPAEFSYRSRVILLFQQIEGVDICIFGMYAQEFGSECGNPNQRCVHISYLDSVKYFRPERRTKSGEALRTFVYHEILIGYLDFCKKRGFSTCYIWACAPSRKGDDYILYCHPEEQKTPKNDKLRRWYLSMIKKATEENIIVGLTNVYDHFFVPTEKGNSKVTTSRLPYFDGDYWCGYVMEAARTIEKESGGDYEKMLKKQVPNRALKTMGHANPSKDTAKDILVMQKVGQKILPTRENFIIAHLQYSCMHCHEVIASGKRWFCTECKKFQECERCHSSDAHISKNGEVHTLCQAVVDDIPSNTKHNDIILESGLFENRNSLLSFCQKYQFQFDILRRAKYSSMMILYHLNNPTLVTVGKCSICYAHNIFQKCWKCEICPECTICSACYKDRGANCHEHKLTQNELTLTQNYSTPLCQFGNRESNEKTMLKLLDVLKHASQCSATNTEPCSYPNCSQIKKLFSHARRCKIRVNRGCQHCKKIWFILTAHSRNCKDSECRIPRCRDLKKHIESKATHSESWRGAAVIESDTAVVDQ