Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014788.t1 | XP_003603464.1 | 96.3 | 383 | 14 | 0 | 1 | 383 | 34 | 416 | 4.40E-202 | 713.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014788.t1 | Q84MB2 | 38.4 | 346 | 127 | 12 | 42 | 378 | 91 | 359 | 5.1e-42 | 173.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014788.t1 | G7JBP9 | 96.3 | 383 | 14 | 0 | 1 | 383 | 34 | 416 | 3.2e-202 | 713.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene014788.t1 | TF | Tify |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014788.t1 | MTR_3g107950 | 96.345 | 383 | 14 | 0 | 1 | 383 | 34 | 416 | 0.0 | 748 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014788.t1 | AT4G32570 | 37.371 | 388 | 156 | 13 | 1 | 378 | 49 | 359 | 2.24e-46 | 162 |
| MS.gene014788.t1 | AT4G32570 | 38.062 | 289 | 103 | 7 | 1 | 285 | 49 | 265 | 9.61e-45 | 158 |
Find 117 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAATTCTGATTCCTCATTTA+TGG | 0.101310 | 3.1:-85717508 | MS.gene014788:CDS |
| TGCTTGAACCGTCGGATTTC+TGG | 0.144469 | 3.1:+85714370 | None:intergenic |
| CTAAGATTGATGCGAATAAA+TGG | 0.197424 | 3.1:-85717185 | MS.gene014788:CDS |
| ACCAGCTTTGCAGTAGATTT+TGG | 0.210010 | 3.1:+85715044 | None:intergenic |
| AGCAGTAGCAGCTGTGTTTA+TGG | 0.223812 | 3.1:+85716972 | None:intergenic |
| ATTATATTAGTTAGAGGTTT+TGG | 0.247280 | 3.1:+85716907 | None:intergenic |
| AATTCTGATTCCTCATTTAT+GGG | 0.297898 | 3.1:-85717507 | MS.gene014788:CDS |
| GTTTATGGAACTTAAAATTC+CGG | 0.317860 | 3.1:+85716987 | None:intergenic |
| GATGTTATAATGGCTTTAGC+TGG | 0.336522 | 3.1:-85715101 | MS.gene014788:CDS |
| CATAGTGGAGAAAATGAAAC+AGG | 0.343306 | 3.1:-85715005 | MS.gene014788:CDS |
| CCCACCTCCGAAACCGCTTC+TGG | 0.346559 | 3.1:-85718236 | MS.gene014788:intron |
| CTCGAGGGAGTTCCGTTCTA+TGG | 0.355043 | 3.1:-85717591 | MS.gene014788:CDS |
| GGAGAAAGGGCCACGAGCAC+CGG | 0.363590 | 3.1:+85718259 | None:intergenic |
| AAGCTTAGGGATACCATTTC+AGG | 0.375711 | 3.1:-85717069 | MS.gene014788:CDS |
| GATTCTATTATATTAGTTAG+AGG | 0.379814 | 3.1:+85716901 | None:intergenic |
| GACCATTTGAAAGGCATCTC+TGG | 0.380703 | 3.1:+85717479 | None:intergenic |
| TCTCTCCTCCAGACGCATTT+CGG | 0.381595 | 3.1:+85717301 | None:intergenic |
| TTCCACCGACGTTAGGTTAC+CGG | 0.385652 | 3.1:-85718306 | MS.gene014788:CDS |
| GTACTTACCAGAAGCGGTTT+CGG | 0.387222 | 3.1:+85718229 | None:intergenic |
| TTTATGGAACTTAAAATTCC+GGG | 0.389295 | 3.1:+85716988 | None:intergenic |
| ACCAGAAGCGGTTTCGGAGG+TGG | 0.406796 | 3.1:+85718235 | None:intergenic |
| ACCAAAATCTACTGCAAAGC+TGG | 0.409213 | 3.1:-85715045 | MS.gene014788:CDS |
| CGCATCAATCTTAGTGTTGG+TGG | 0.409917 | 3.1:+85717194 | None:intergenic |
| CGCGGAGGATGCTGCATGGA+AGG | 0.412485 | 3.1:+85717135 | None:intergenic |
| CATGGGAAGTTGTCTGCTAC+TGG | 0.416162 | 3.1:-85714948 | MS.gene014788:CDS |
| AACTAGCTTCAAACAAGCTT+AGG | 0.417740 | 3.1:-85717083 | MS.gene014788:CDS |
| GCCACGAGCACCGGCGGAGG+AGG | 0.420220 | 3.1:+85718268 | None:intergenic |
| TATGCAGGCTGATGTTATAA+TGG | 0.438508 | 3.1:-85715111 | MS.gene014788:intron |
| TGATGATGTCCACCAACATA+AGG | 0.439728 | 3.1:-85716704 | MS.gene014788:intron |
| CAGGTCCTCCGAAATGCGTC+TGG | 0.445569 | 3.1:-85717309 | MS.gene014788:CDS |
| GATAAATGAAGGGCCTGAAA+TGG | 0.460185 | 3.1:+85717056 | None:intergenic |
| TAAGCTTGTTTGAAGCTAGT+TGG | 0.461069 | 3.1:+85717085 | None:intergenic |
| ATAGTCATCTGGCGGCTGGC+AGG | 0.466446 | 3.1:+85716754 | None:intergenic |
| GCATTCCCACAAGAGCTTCA+TGG | 0.467087 | 3.1:-85714966 | MS.gene014788:CDS |
| GAAAGGGCCACGAGCACCGG+CGG | 0.469354 | 3.1:+85718262 | None:intergenic |
| CATTCCCACAAGAGCTTCAT+GGG | 0.469855 | 3.1:-85714965 | MS.gene014788:CDS |
| CTCCAGAGATGCCTTTCAAA+TGG | 0.470651 | 3.1:-85717481 | MS.gene014788:CDS |
| TAAGATTGATGCGAATAAAT+GGG | 0.473687 | 3.1:-85717184 | MS.gene014788:CDS |
| GAAGCTAGTTGGTGTGCAAA+AGG | 0.473984 | 3.1:+85717096 | None:intergenic |
| TCAAAACTCGCATTTGATGA+AGG | 0.474807 | 3.1:-85717445 | MS.gene014788:intron |
| CCAGAAGCGGTTTCGGAGGT+GGG | 0.475857 | 3.1:+85718236 | None:intergenic |
| GGAGTAGATACACGATCAAC+AGG | 0.476638 | 3.1:+85714903 | None:intergenic |
| AGGGCCACGAGCACCGGCGG+AGG | 0.478100 | 3.1:+85718265 | None:intergenic |
| CTGGGTCAAATGGTGGATCT+TGG | 0.478685 | 3.1:-85715082 | MS.gene014788:CDS |
| CTGATACTTCCACCGACGTT+AGG | 0.478726 | 3.1:-85718313 | MS.gene014788:CDS |
| CATCAATTTGGTAGAAAAGC+AGG | 0.480591 | 3.1:-85717625 | MS.gene014788:intron |
| GCCTCCTCCGCCGGTGCTCG+TGG | 0.487582 | 3.1:-85718269 | MS.gene014788:CDS |
| ATGGCTTTAGCTGGGTCAAA+TGG | 0.490826 | 3.1:-85715092 | MS.gene014788:CDS |
| TCAGCATCAGCCTCCTCCGC+CGG | 0.490900 | 3.1:-85718278 | MS.gene014788:CDS |
| GCTGATGAAGGATCTAGAAC+TGG | 0.491143 | 3.1:-85717021 | MS.gene014788:CDS |
| AACTTCCCATGAAGCTCTTG+TGG | 0.491396 | 3.1:+85714960 | None:intergenic |
| CTCCATAAAAGATAGTCATC+TGG | 0.496051 | 3.1:+85716743 | None:intergenic |
| ATGCAGCATCCTCCGCGTGC+AGG | 0.496967 | 3.1:-85717129 | MS.gene014788:CDS |
| GAGATAAGTAACAGACTAGT+GGG | 0.497646 | 3.1:-85717543 | MS.gene014788:CDS |
| ACTTCCCATGAAGCTCTTGT+GGG | 0.498210 | 3.1:+85714961 | None:intergenic |
| ACTAGCTTCAAACAAGCTTA+GGG | 0.503406 | 3.1:-85717082 | MS.gene014788:CDS |
| GCAGGCTGAGAGATAAATGA+AGG | 0.506389 | 3.1:+85717045 | None:intergenic |
| AATGATGACGAAGTGTTACT+TGG | 0.508592 | 3.1:-85717264 | MS.gene014788:CDS |
| GGATCTGCTGCTTGAACCGT+CGG | 0.509893 | 3.1:+85714362 | None:intergenic |
| AGAAGCGGTTTCGGAGGTGG+GGG | 0.510027 | 3.1:+85718238 | None:intergenic |
| GGATCTAGAACTGGAATCAA+AGG | 0.514477 | 3.1:-85717012 | MS.gene014788:CDS |
| GAGGCTGATGCTGATGCCTC+CGG | 0.517085 | 3.1:+85718287 | None:intergenic |
| TCTCAGCCTGCCGCTGATGA+AGG | 0.519106 | 3.1:-85717033 | MS.gene014788:CDS |
| ATTCGCATCAATCTTAGTGT+TGG | 0.520039 | 3.1:+85717191 | None:intergenic |
| CTAGATCCTTCATCAGCGGC+AGG | 0.525101 | 3.1:+85717027 | None:intergenic |
| CGGTCTATTCTCATGAATGC+TGG | 0.526152 | 3.1:-85717159 | MS.gene014788:CDS |
| AGTAACACTTCGTCATCATT+AGG | 0.535648 | 3.1:+85717267 | None:intergenic |
| GGCAGTTCTAGCCGTGCCGT+TGG | 0.541164 | 3.1:-85714927 | MS.gene014788:CDS |
| AATATCTGAGAACTAGAAGA+TGG | 0.544323 | 3.1:+85717225 | None:intergenic |
| AAAGATAGTCATCTGGCGGC+TGG | 0.544851 | 3.1:+85716750 | None:intergenic |
| CAGAAGCGGTTTCGGAGGTG+GGG | 0.547490 | 3.1:+85718237 | None:intergenic |
| ATGTTATAATGGCTTTAGCT+GGG | 0.549931 | 3.1:-85715100 | MS.gene014788:CDS |
| AAGGTTGGACCTTATGTTGG+TGG | 0.550076 | 3.1:+85716695 | None:intergenic |
| ATTTCATCTGCAGTGCTGCT+CGG | 0.551203 | 3.1:-85716940 | MS.gene014788:CDS |
| GCGGAGGATGCTGCATGGAA+GGG | 0.553889 | 3.1:+85717136 | None:intergenic |
| GCATCAATCTTAGTGTTGGT+GGG | 0.554769 | 3.1:+85717195 | None:intergenic |
| TACAAGGTTGGACCTTATGT+TGG | 0.561474 | 3.1:+85716692 | None:intergenic |
| AGAACTGGAATCAAAGGCCC+CGG | 0.567203 | 3.1:-85717006 | MS.gene014788:CDS |
| CCGGTTGTAGGGGCGCATCA+AGG | 0.580384 | 3.1:-85714413 | MS.gene014788:intron |
| TCACTTCTTGGGCCATAGAA+CGG | 0.581400 | 3.1:+85717579 | None:intergenic |
| TCTGGAGGAACCCATAAATG+AGG | 0.581916 | 3.1:+85717497 | None:intergenic |
| AACGATAGTAACTTGCATAG+TGG | 0.584799 | 3.1:-85715020 | MS.gene014788:CDS |
| TGCACGCGGAGGATGCTGCA+TGG | 0.586678 | 3.1:+85717131 | None:intergenic |
| GCTTTAGCTGGGTCAAATGG+TGG | 0.588269 | 3.1:-85715089 | MS.gene014788:CDS |
| GATCGTGTATCTACTCCAGC+CGG | 0.597972 | 3.1:-85714897 | MS.gene014788:intron |
| GGAATCAGGGACCATTTGAA+AGG | 0.601761 | 3.1:+85717470 | None:intergenic |
| TACACGATCAACAGGTCCAA+CGG | 0.603243 | 3.1:+85714911 | None:intergenic |
| GATCAACAGGTCCAACGGCA+CGG | 0.605689 | 3.1:+85714916 | None:intergenic |
| CTCCTCCAGACGCATTTCGG+AGG | 0.605747 | 3.1:+85717304 | None:intergenic |
| AACGTCGGTGGAAGTATCAG+TGG | 0.609086 | 3.1:+85718316 | None:intergenic |
| GTCCTCCGAAATGCGTCTGG+AGG | 0.623376 | 3.1:-85717306 | MS.gene014788:CDS |
| GTATTGAGCAGCAGTCAACA+TGG | 0.625398 | 3.1:-85716784 | MS.gene014788:intron |
| TGAGATAAGTAACAGACTAG+TGG | 0.631355 | 3.1:-85717544 | MS.gene014788:CDS |
| TTAGGAGTACTTACCAGAAG+CGG | 0.633996 | 3.1:+85718223 | None:intergenic |
| CTTACCAGAAGCGGTTTCGG+AGG | 0.640461 | 3.1:+85718232 | None:intergenic |
| TTGATGCGAATAAATGGGAA+CGG | 0.646108 | 3.1:-85717179 | MS.gene014788:CDS |
| CATTTGAAAGGCATCTCTGG+AGG | 0.646720 | 3.1:+85717482 | None:intergenic |
| CACCGACGTTAGGTTACCGG+AGG | 0.647418 | 3.1:-85718303 | MS.gene014788:CDS |
| CTGGAGGAGAGAGATCGAGA+AGG | 0.648772 | 3.1:-85717290 | MS.gene014788:CDS |
| CAGGTATCGAATCATCTCGA+GGG | 0.650968 | 3.1:-85717606 | MS.gene014788:CDS |
| AGTTCTAGATCCTTCATCAG+CGG | 0.651396 | 3.1:+85717023 | None:intergenic |
| TCAATCTTAGTGTTGGTGGG+TGG | 0.654121 | 3.1:+85717198 | None:intergenic |
| CTCCGGTAACCTAACGTCGG+TGG | 0.654776 | 3.1:+85718304 | None:intergenic |
| ACGTCGGTGGAAGTATCAGT+GGG | 0.655076 | 3.1:+85718317 | None:intergenic |
| GCAGGTATCGAATCATCTCG+AGG | 0.661921 | 3.1:-85717607 | MS.gene014788:CDS |
| TTATGGAACTTAAAATTCCG+GGG | 0.662736 | 3.1:+85716989 | None:intergenic |
| TCATCTGCAGTGCTGCTCGG+TGG | 0.664281 | 3.1:-85716937 | MS.gene014788:CDS |
| CATAAAAGATAGTCATCTGG+CGG | 0.666315 | 3.1:+85716746 | None:intergenic |
| GGAGTCAACTGTCCTGCACG+CGG | 0.676528 | 3.1:+85717117 | None:intergenic |
| GTCAACTGTCCTGCACGCGG+AGG | 0.677451 | 3.1:+85717120 | None:intergenic |
| CAGGCTGAGAGATAAATGAA+GGG | 0.677535 | 3.1:+85717046 | None:intergenic |
| TAAAGATACCAGAAATCCGA+CGG | 0.679270 | 3.1:-85714378 | MS.gene014788:CDS |
| AACAGGGTTAGTGAGTAATG+TGG | 0.689431 | 3.1:-85714988 | MS.gene014788:CDS |
| TGCCTCCGGTAACCTAACGT+CGG | 0.705158 | 3.1:+85718301 | None:intergenic |
| ATAAGATAGATTTACCTTGG+GGG | 0.712059 | 3.1:+85716871 | None:intergenic |
| ATAGTGGAGAAAATGAAACA+GGG | 0.722474 | 3.1:-85715004 | MS.gene014788:CDS |
| AGATAAGTAACAGACTAGTG+GGG | 0.741446 | 3.1:-85717542 | MS.gene014788:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCTAAATATATTAGAATAT+TGG | - | chr3.1:85718062-85718081 | MS.gene014788:intron | 10.0% |
| !!! | AAATGATTTTAATGAAAAAT+TGG | + | chr3.1:85717329-85717348 | None:intergenic | 10.0% |
| !!! | ATTTTTCATTAAAATCATTT+AGG | - | chr3.1:85717329-85717348 | MS.gene014788:intron | 10.0% |
| !!! | TATAATGATATGAATTTTTA+GGG | - | chr3.1:85714864-85714883 | MS.gene014788:intron | 10.0% |
| !!! | TTTTTCATTAAAATCATTTA+GGG | - | chr3.1:85717330-85717349 | MS.gene014788:intron | 10.0% |
| !! | AGAAAATAATATAAAAGCAA+AGG | + | chr3.1:85715302-85715321 | None:intergenic | 15.0% |
| !! | TCTAATATATTTAGAAAGAA+AGG | + | chr3.1:85718058-85718077 | None:intergenic | 15.0% |
| !! | TGAATAAAAAAATGAAACAT+GGG | + | chr3.1:85714492-85714511 | None:intergenic | 15.0% |
| !!! | GTATAATGATATGAATTTTT+AGG | - | chr3.1:85714863-85714882 | MS.gene014788:intron | 15.0% |
| !!! | GTTTTTATGTTTTCTTTAAA+TGG | - | chr3.1:85714990-85715009 | MS.gene014788:CDS | 15.0% |
| !!! | GTTTTTGTTTCAATAATTAT+AGG | - | chr3.1:85714612-85714631 | MS.gene014788:intron | 15.0% |
| !!! | TTTAATGAAAAATTGGTTTT+TGG | + | chr3.1:85717322-85717341 | None:intergenic | 15.0% |
| !! | AAAGATCAAAGAAAATAAAC+AGG | + | chr3.1:85717377-85717396 | None:intergenic | 20.0% |
| !! | AAATTGTTCCTTAAAAAACT+CGG | - | chr3.1:85716071-85716090 | MS.gene014788:intron | 20.0% |
| !! | AATCAAAACTTTAGTTGTTT+AGG | + | chr3.1:85714455-85714474 | None:intergenic | 20.0% |
| !! | AGTGAAAATAAATAGAAACA+AGG | + | chr3.1:85715832-85715851 | None:intergenic | 20.0% |
| !! | ATACATGTTAAAAAACCATT+CGG | + | chr3.1:85716944-85716963 | None:intergenic | 20.0% |
| !! | ATATAAGATAGATTTACCTT+GGG | + | chr3.1:85715791-85715810 | None:intergenic | 20.0% |
| !! | CTGAATAAAAAAATGAAACA+TGG | + | chr3.1:85714493-85714512 | None:intergenic | 20.0% |
| !! | GAATAAAAAAATGAAACATG+GGG | + | chr3.1:85714491-85714510 | None:intergenic | 20.0% |
| !! | GATTCTATTATATTAGTTAG+AGG | + | chr3.1:85715759-85715778 | None:intergenic | 20.0% |
| !! | TAGACTTGATGTATAAATAT+TGG | - | chr3.1:85717174-85717193 | MS.gene014788:CDS | 20.0% |
| !! | TATATAAGATAGATTTACCT+TGG | + | chr3.1:85715792-85715811 | None:intergenic | 20.0% |
| !! | TATATTCAATAGCCAAAAAA+AGG | - | chr3.1:85715270-85715289 | MS.gene014788:intron | 20.0% |
| !!! | AAGTTTTTTGTTCAAAACAA+TGG | + | chr3.1:85714810-85714829 | None:intergenic | 20.0% |
| !!! | ATTATATTAGTTAGAGGTTT+TGG | + | chr3.1:85715753-85715772 | None:intergenic | 20.0% |
| !!! | CAACTAAAGTTTTGATTTTT+AGG | - | chr3.1:85714458-85714477 | MS.gene014788:intron | 20.0% |
| !!! | TCTTTTCTATCAGATATTAT+TGG | + | chr3.1:85716358-85716377 | None:intergenic | 20.0% |
| !!! | TTTTAACAGTTACTTATCTA+AGG | - | chr3.1:85716462-85716481 | MS.gene014788:intron | 20.0% |
| !!! | TTTTTGGCTATTGAATATAT+TGG | + | chr3.1:85715269-85715288 | None:intergenic | 20.0% |
| ! | AAATACTTATACAAGTGACT+AGG | + | chr3.1:85716751-85716770 | None:intergenic | 25.0% |
| ! | AATAAGCATTAAAAACCGAA+TGG | - | chr3.1:85716926-85716945 | MS.gene014788:CDS | 25.0% |
| ! | AATAATGCCTGAAATTAGTT+TGG | - | chr3.1:85716025-85716044 | MS.gene014788:intron | 25.0% |
| ! | AATAGAATTGCTTAAGCTTT+GGG | - | chr3.1:85716394-85716413 | MS.gene014788:intron | 25.0% |
| ! | AATATTCTGATTTCTAAGTG+GGG | - | chr3.1:85716987-85717006 | MS.gene014788:CDS | 25.0% |
| ! | AATCAAGAAAATATTCGAGT+TGG | + | chr3.1:85718118-85718137 | None:intergenic | 25.0% |
| ! | AATTCCCCTTAATATGATAT+CGG | - | chr3.1:85717909-85717928 | MS.gene014788:intron | 25.0% |
| ! | AATTCTGATTCCTCATTTAT+GGG | - | chr3.1:85715150-85715169 | MS.gene014788:intron | 25.0% |
| ! | AGATAAGTAACTGTTAAAAC+CGG | + | chr3.1:85716461-85716480 | None:intergenic | 25.0% |
| ! | AGCTTAAGCAATTCTATTAT+TGG | + | chr3.1:85716392-85716411 | None:intergenic | 25.0% |
| ! | ATCATATTTCAGCCAAAATA+CGG | - | chr3.1:85716159-85716178 | MS.gene014788:intron | 25.0% |
| ! | GAATATTCTGATTTCTAAGT+GGG | - | chr3.1:85716986-85717005 | MS.gene014788:CDS | 25.0% |
| ! | GTTTATGGAACTTAAAATTC+CGG | + | chr3.1:85715673-85715692 | None:intergenic | 25.0% |
| ! | TAAGATTGATGCGAATAAAT+GGG | - | chr3.1:85715473-85715492 | MS.gene014788:intron | 25.0% |
| ! | TAATAGAATTGCTTAAGCTT+TGG | - | chr3.1:85716393-85716412 | MS.gene014788:intron | 25.0% |
| ! | TAATTCTGATTCCTCATTTA+TGG | - | chr3.1:85715149-85715168 | MS.gene014788:intron | 25.0% |
| ! | TAGTCACTTGTATAAGTATT+TGG | - | chr3.1:85716750-85716769 | MS.gene014788:CDS | 25.0% |
| ! | TATAAGATAGATTTACCTTG+GGG | + | chr3.1:85715790-85715809 | None:intergenic | 25.0% |
| ! | TATGACAAGTTAAGAATACA+AGG | + | chr3.1:85715984-85716003 | None:intergenic | 25.0% |
| ! | TATTGCTTGATATTGCTTAT+TGG | - | chr3.1:85717109-85717128 | MS.gene014788:CDS | 25.0% |
| ! | TCTTAGTTTCTTACTTATTC+TGG | - | chr3.1:85714929-85714948 | MS.gene014788:CDS | 25.0% |
| ! | TTGATTGATTGCTAAATATC+CGG | - | chr3.1:85718225-85718244 | MS.gene014788:intron | 25.0% |
| ! | TTTATGGAACTTAAAATTCC+GGG | + | chr3.1:85715672-85715691 | None:intergenic | 25.0% |
| !! | AATTTATGGTCATGATTTTC+TGG | - | chr3.1:85714684-85714703 | MS.gene014788:intron | 25.0% |
| !! | AGAAGACAAGAATTTTCATA+TGG | + | chr3.1:85718157-85718176 | None:intergenic | 25.0% |
| !! | CTGACTCTAAATTATTTTCA+TGG | + | chr3.1:85714756-85714775 | None:intergenic | 25.0% |
| !! | TTGATTGAGTTTATGCATTT+TGG | - | chr3.1:85715851-85715870 | MS.gene014788:intron | 25.0% |
| !! | TTTTTAATCAAAATCCAGTG+AGG | - | chr3.1:85717223-85717242 | MS.gene014788:CDS | 25.0% |
| !!! | TTCCATTTTTTTCTCTTAGT+GGG | - | chr3.1:85714542-85714561 | MS.gene014788:intron | 25.0% |
| !!! | TTTCCATTTTTTTCTCTTAG+TGG | - | chr3.1:85714541-85714560 | MS.gene014788:intron | 25.0% |
| AACCAAAGACACAAAATTGA+GGG | + | chr3.1:85714581-85714600 | None:intergenic | 30.0% | |
| AAGAAAAGGATGACACAAAA+AGG | + | chr3.1:85718024-85718043 | None:intergenic | 30.0% | |
| AATATCTGAGAACTAGAAGA+TGG | + | chr3.1:85715435-85715454 | None:intergenic | 30.0% | |
| ACAAGTTAAGAATACAAGGT+TGG | + | chr3.1:85715980-85715999 | None:intergenic | 30.0% | |
| AGTTGTCCGATATCATATTA+AGG | + | chr3.1:85717918-85717937 | None:intergenic | 30.0% | |
| ATAAGATAGATTTACCTTGG+GGG | + | chr3.1:85715789-85715808 | None:intergenic | 30.0% | |
| ATTGATCAATCAATGCCTTT+GGG | - | chr3.1:85717291-85717310 | MS.gene014788:CDS | 30.0% | |
| CATTGCATTTAAGCTACATT+TGG | - | chr3.1:85716698-85716717 | MS.gene014788:intron | 30.0% | |
| CTAAGATTGATGCGAATAAA+TGG | - | chr3.1:85715472-85715491 | MS.gene014788:intron | 30.0% | |
| CTATCATGAGGATTACTATT+AGG | + | chr3.1:85716830-85716849 | None:intergenic | 30.0% | |
| GACGTAAAAATTAACTGACT+TGG | - | chr3.1:85716537-85716556 | MS.gene014788:intron | 30.0% | |
| GCATACTACATAGTTTGATT+TGG | - | chr3.1:85717793-85717812 | MS.gene014788:intron | 30.0% | |
| GGAATATTCTGATTTCTAAG+TGG | - | chr3.1:85716985-85717004 | MS.gene014788:CDS | 30.0% | |
| GTATTATCATACCTCCAAAT+TGG | - | chr3.1:85717832-85717851 | MS.gene014788:intron | 30.0% | |
| GTTGTCCGATATCATATTAA+GGG | + | chr3.1:85717917-85717936 | None:intergenic | 30.0% | |
| TAGTCACTTGTATAAGTACT+TGG | - | chr3.1:85716776-85716795 | MS.gene014788:CDS | 30.0% | |
| TCTTTCAATCACTACCAATT+TGG | + | chr3.1:85717849-85717868 | None:intergenic | 30.0% | |
| TTATGGAACTTAAAATTCCG+GGG | + | chr3.1:85715671-85715690 | None:intergenic | 30.0% | |
| TTCACAGTTGAAGTGATTAA+TGG | + | chr3.1:85717030-85717049 | None:intergenic | 30.0% | |
| TTGGCTATTGAATATATTGG+AGG | + | chr3.1:85715266-85715285 | None:intergenic | 30.0% | |
| TTGTCCGATATCATATTAAG+GGG | + | chr3.1:85717916-85717935 | None:intergenic | 30.0% | |
| ! | AGACACATATAGTTTGTCTT+GGG | - | chr3.1:85717430-85717449 | MS.gene014788:intron | 30.0% |
| ! | ATAGTGGAGAAAATGAAACA+GGG | - | chr3.1:85717653-85717672 | MS.gene014788:intron | 30.0% |
| ! | ATTGCAGTTTCTACATCTTT+TGG | - | chr3.1:85716300-85716319 | MS.gene014788:intron | 30.0% |
| ! | CAAATCCATCAAGAATTTTG+AGG | - | chr3.1:85716512-85716531 | MS.gene014788:intron | 30.0% |
| ! | CATCCTTTTCTTTACTTTAC+TGG | - | chr3.1:85718032-85718051 | MS.gene014788:intron | 30.0% |
| ! | CTTTTCTACCAAATTGATGA+GGG | + | chr3.1:85715031-85715050 | None:intergenic | 30.0% |
| ! | GGATTGTTGAAAGCTAATTT+TGG | + | chr3.1:85717955-85717974 | None:intergenic | 30.0% |
| ! | TAAGTATCAACACCGTATTT+TGG | + | chr3.1:85716174-85716193 | None:intergenic | 30.0% |
| ! | TATCTGTTTACTGCATTTTG+TGG | - | chr3.1:85716002-85716021 | MS.gene014788:intron | 30.0% |
| ! | TATTTTCACTACTGTAAGAG+TGG | + | chr3.1:85716910-85716929 | None:intergenic | 30.0% |
| ! | TGGAAAGTATAGAACTTTAG+TGG | + | chr3.1:85714527-85714546 | None:intergenic | 30.0% |
| ! | TTAGGGCAAACTCATTTTAA+AGG | - | chr3.1:85717347-85717366 | MS.gene014788:intron | 30.0% |
| ! | TTTTCTACCAAATTGATGAG+GGG | + | chr3.1:85715030-85715049 | None:intergenic | 30.0% |
| !! | AGAAAATATTCGAGTTGGTA+CGG | + | chr3.1:85718113-85718132 | None:intergenic | 30.0% |
| !! | ATGTTATAATGGCTTTAGCT+GGG | - | chr3.1:85717557-85717576 | MS.gene014788:CDS | 30.0% |
| !! | TTTCTGTCTAGTTCTTGTAA+TGG | - | chr3.1:85717394-85717413 | MS.gene014788:intron | 30.0% |
| !!! | CAAAGGCATTTTCCTTTTTT+TGG | + | chr3.1:85715285-85715304 | None:intergenic | 30.0% |
| !!! | CATTATTTTTGCTGTTGTGT+TGG | - | chr3.1:85714892-85714911 | MS.gene014788:intron | 30.0% |
| !!! | CTTTATTTTGCTTTGTAGCA+TGG | - | chr3.1:85714708-85714727 | MS.gene014788:intron | 30.0% |
| !!! | TCCATTTTTTTCTCTTAGTG+GGG | - | chr3.1:85714543-85714562 | MS.gene014788:intron | 30.0% |
| ACAATTTAACTGATCCTCAC+TGG | + | chr3.1:85717240-85717259 | None:intergenic | 35.0% | |
| ACATGTATACCCAAGACAAT+AGG | - | chr3.1:85716956-85716975 | MS.gene014788:CDS | 35.0% | |
| ACCCCACTAAGAGAAAAAAA+TGG | + | chr3.1:85714547-85714566 | None:intergenic | 35.0% | |
| AGATAAGTAACAGACTAGTG+GGG | - | chr3.1:85715115-85715134 | MS.gene014788:intron | 35.0% | |
| AGGCCAGTAAAGTAAAGAAA+AGG | + | chr3.1:85718038-85718057 | None:intergenic | 35.0% | |
| AGTAACACTTCGTCATCATT+AGG | + | chr3.1:85715393-85715412 | None:intergenic | 35.0% | |
| ATCAGATTTCTGCCGAAATA+TGG | - | chr3.1:85716240-85716259 | MS.gene014788:intron | 35.0% | |
| ATTCGCATCAATCTTAGTGT+TGG | + | chr3.1:85715469-85715488 | None:intergenic | 35.0% | |
| ATTGCTAAATATCCGGTTGT+AGG | - | chr3.1:85718232-85718251 | MS.gene014788:intron | 35.0% | |
| CAAACTATGTAGTATGCTTG+AGG | + | chr3.1:85717790-85717809 | None:intergenic | 35.0% | |
| CAACCAAAGACACAAAATTG+AGG | + | chr3.1:85714582-85714601 | None:intergenic | 35.0% | |
| CAATACATCTCGCATTTCAA+AGG | + | chr3.1:85717094-85717113 | None:intergenic | 35.0% | |
| CACAGATCCAAACTAATTTC+AGG | + | chr3.1:85716035-85716054 | None:intergenic | 35.0% | |
| CACATCTATAAGCTATCATG+AGG | + | chr3.1:85716842-85716861 | None:intergenic | 35.0% | |
| CATAAAAGATAGTCATCTGG+CGG | + | chr3.1:85715914-85715933 | None:intergenic | 35.0% | |
| CATCAATTTGGTAGAAAAGC+AGG | - | chr3.1:85715032-85715051 | MS.gene014788:CDS | 35.0% | |
| CATGTATACCCAAGACAATA+GGG | - | chr3.1:85716957-85716976 | MS.gene014788:CDS | 35.0% | |
| CATGTGAATGTTTGTGCATT+GGG | - | chr3.1:85714838-85714857 | MS.gene014788:intron | 35.0% | |
| CATTGATCAATCAATGCCTT+TGG | - | chr3.1:85717290-85717309 | MS.gene014788:CDS | 35.0% | |
| CCATCTCAATAAAACGAGAA+AGG | - | chr3.1:85717054-85717073 | MS.gene014788:CDS | 35.0% | |
| CTCCATAAAAGATAGTCATC+TGG | + | chr3.1:85715917-85715936 | None:intergenic | 35.0% | |
| CTTCACAAACTCATAACAGA+AGG | - | chr3.1:85717461-85717480 | MS.gene014788:CDS | 35.0% | |
| GACCATAAATTTGCATACCA+AGG | + | chr3.1:85714675-85714694 | None:intergenic | 35.0% | |
| GAGATAAGTAACAGACTAGT+GGG | - | chr3.1:85715114-85715133 | MS.gene014788:intron | 35.0% | |
| GTTTGATGCAAAATGCTAGA+AGG | + | chr3.1:85716491-85716510 | None:intergenic | 35.0% | |
| TAAAGATACCAGAAATCCGA+CGG | - | chr3.1:85718279-85718298 | MS.gene014788:CDS | 35.0% | |
| TAGAAACTGCAATATGAGTG+TGG | + | chr3.1:85716293-85716312 | None:intergenic | 35.0% | |
| TATGCAGGCTGATGTTATAA+TGG | - | chr3.1:85717546-85717565 | MS.gene014788:CDS | 35.0% | |
| TCAAAACTCGCATTTGATGA+AGG | - | chr3.1:85715212-85715231 | MS.gene014788:intron | 35.0% | |
| TCAAGTCTAAAAGTAACGCT+CGG | + | chr3.1:85717163-85717182 | None:intergenic | 35.0% | |
| TCATGTGAATGTTTGTGCAT+TGG | - | chr3.1:85714837-85714856 | MS.gene014788:intron | 35.0% | |
| TGAGATAAGTAACAGACTAG+TGG | - | chr3.1:85715113-85715132 | MS.gene014788:intron | 35.0% | |
| TGAGTATCAACGCCATATTT+CGG | + | chr3.1:85716255-85716274 | None:intergenic | 35.0% | |
| TGCCAGAAAAATCACTTCTT+GGG | + | chr3.1:85715092-85715111 | None:intergenic | 35.0% | |
| TTCAATCACTACCAATTTGG+AGG | + | chr3.1:85717846-85717865 | None:intergenic | 35.0% | |
| TTGATGCGAATAAATGGGAA+CGG | - | chr3.1:85715478-85715497 | MS.gene014788:intron | 35.0% | |
| TTGCTAAATATCCGGTTGTA+GGG | - | chr3.1:85718233-85718252 | MS.gene014788:intron | 35.0% | |
| TTGGATCTGTGAATCATCAT+GGG | - | chr3.1:85716044-85716063 | MS.gene014788:intron | 35.0% | |
| TTTGGATCTGTGAATCATCA+TGG | - | chr3.1:85716043-85716062 | MS.gene014788:intron | 35.0% | |
| TTTGTGTCTTTGGTTGGATT+TGG | - | chr3.1:85714586-85714605 | MS.gene014788:intron | 35.0% | |
| ! | AAAACAGTCTTTTCTCTTGC+CGG | - | chr3.1:85716439-85716458 | MS.gene014788:intron | 35.0% |
| ! | AACGATAGTAACTTGCATAG+TGG | - | chr3.1:85717637-85717656 | MS.gene014788:intron | 35.0% |
| ! | AACTAGCTTCAAACAAGCTT+AGG | - | chr3.1:85715574-85715593 | MS.gene014788:intron | 35.0% |
| ! | AATGATGACGAAGTGTTACT+TGG | - | chr3.1:85715393-85715412 | MS.gene014788:intron | 35.0% |
| ! | ACAAAAAGGATCAGTGGATT+TGG | + | chr3.1:85718010-85718029 | None:intergenic | 35.0% |
| ! | ACTAGCTTCAAACAAGCTTA+GGG | - | chr3.1:85715575-85715594 | MS.gene014788:intron | 35.0% |
| ! | CAGATGACTATCTTTTATGG+AGG | - | chr3.1:85715915-85715934 | MS.gene014788:intron | 35.0% |
| ! | CATAGTGGAGAAAATGAAAC+AGG | - | chr3.1:85717652-85717671 | MS.gene014788:intron | 35.0% |
| ! | CTCAATTTTGTGTCTTTGGT+TGG | - | chr3.1:85714580-85714599 | MS.gene014788:intron | 35.0% |
| ! | GAGACACATATAGTTTGTCT+TGG | - | chr3.1:85717429-85717448 | MS.gene014788:intron | 35.0% |
| ! | GCTTTTCTACCAAATTGATG+AGG | + | chr3.1:85715032-85715051 | None:intergenic | 35.0% |
| ! | GTAGTGTGTTTGAAGTTAGT+TGG | - | chr3.1:85714634-85714653 | MS.gene014788:intron | 35.0% |
| ! | TAAGCTTGTTTGAAGCTAGT+TGG | + | chr3.1:85715575-85715594 | None:intergenic | 35.0% |
| ! | TGTTTTACCCCTCATCAATT+TGG | - | chr3.1:85715020-85715039 | MS.gene014788:CDS | 35.0% |
| ! | TTCCCTCAATTTTGTGTCTT+TGG | - | chr3.1:85714576-85714595 | MS.gene014788:intron | 35.0% |
| ! | TTCTAAATTCCGACTTGAGT+TGG | - | chr3.1:85717264-85717283 | MS.gene014788:CDS | 35.0% |
| ! | TTGGTAGTCATTGCACAATA+TGG | - | chr3.1:85716319-85716338 | MS.gene014788:intron | 35.0% |
| !! | ATCCATCAAGAATTTTGAGG+CGG | - | chr3.1:85716515-85716534 | MS.gene014788:intron | 35.0% |
| !! | CCTTTCTCGTTTTATTGAGA+TGG | + | chr3.1:85717057-85717076 | None:intergenic | 35.0% |
| !! | GAAAATATTCGAGTTGGTAC+GGG | + | chr3.1:85718112-85718131 | None:intergenic | 35.0% |
| !! | GATGTTATAATGGCTTTAGC+TGG | - | chr3.1:85717556-85717575 | MS.gene014788:CDS | 35.0% |
| !!! | CATCAAATGCGAGTTTTGAA+AGG | + | chr3.1:85715211-85715230 | None:intergenic | 35.0% |
| !!! | CTTAAGTCCTGTTTTTGTAC+AGG | - | chr3.1:85715329-85715348 | MS.gene014788:intron | 35.0% |
| AAGCTTAGGGATACCATTTC+AGG | - | chr3.1:85715588-85715607 | MS.gene014788:intron | 40.0% | |
| ACCAAAATCTACTGCAAAGC+TGG | - | chr3.1:85717612-85717631 | MS.gene014788:CDS | 40.0% | |
| ACTACTGCAGACGATATGTT+TGG | + | chr3.1:85717889-85717908 | None:intergenic | 40.0% | |
| ACTACTGTAAGAGTGGAGTT+TGG | + | chr3.1:85716903-85716922 | None:intergenic | 40.0% | |
| ACTGCAATATGAGTGTGGTA+CGG | + | chr3.1:85716288-85716307 | None:intergenic | 40.0% | |
| CAGGCTGAGAGATAAATGAA+GGG | + | chr3.1:85715614-85715633 | None:intergenic | 40.0% | |
| CCTGAAATCTTAACCAAGCA+GGG | - | chr3.1:85716663-85716682 | MS.gene014788:intron | 40.0% | |
| CCTGCTTGGTTAAGATTTCA+GGG | + | chr3.1:85716665-85716684 | None:intergenic | 40.0% | |
| CGCCTTGGTATGCAAATTTA+TGG | - | chr3.1:85714670-85714689 | MS.gene014788:intron | 40.0% | |
| CTACTGCAGACGATATGTTT+GGG | + | chr3.1:85717888-85717907 | None:intergenic | 40.0% | |
| CTACTGTAAGAGTGGAGTTT+GGG | + | chr3.1:85716902-85716921 | None:intergenic | 40.0% | |
| GATAAATGAAGGGCCTGAAA+TGG | + | chr3.1:85715604-85715623 | None:intergenic | 40.0% | |
| GATGACACAAAAAGGATCAG+TGG | + | chr3.1:85718016-85718035 | None:intergenic | 40.0% | |
| GCTGAATGAGAATCAAAGAG+GGG | + | chr3.1:85716880-85716899 | None:intergenic | 40.0% | |
| GGCTGAATGAGAATCAAAGA+GGG | + | chr3.1:85716881-85716900 | None:intergenic | 40.0% | |
| GTAGTATGCTTGAGGATTAC+CGG | + | chr3.1:85717782-85717801 | None:intergenic | 40.0% | |
| GTAGTCATTGCACAATATGG+TGG | - | chr3.1:85716322-85716341 | MS.gene014788:intron | 40.0% | |
| GTCTGTGGTTTATTCGTGAT+TGG | - | chr3.1:85716093-85716112 | MS.gene014788:intron | 40.0% | |
| GTGCCAGAAAAATCACTTCT+TGG | + | chr3.1:85715093-85715112 | None:intergenic | 40.0% | |
| TACAAGGTTGGACCTTATGT+TGG | + | chr3.1:85715968-85715987 | None:intergenic | 40.0% | |
| TACTGCAGACGATATGTTTG+GGG | + | chr3.1:85717887-85717906 | None:intergenic | 40.0% | |
| TCAATGTAGCCAACTCAAGT+CGG | + | chr3.1:85717276-85717295 | None:intergenic | 40.0% | |
| TCATATGCACTCTCAACGAA+AGG | + | chr3.1:85716617-85716636 | None:intergenic | 40.0% | |
| TCCTTAAAAAACTCGGTCTG+TGG | - | chr3.1:85716078-85716097 | MS.gene014788:intron | 40.0% | |
| TGCTAAATATCCGGTTGTAG+GGG | - | chr3.1:85718234-85718253 | MS.gene014788:intron | 40.0% | |
| TTCTGATTTCTAAGTGGGGT+AGG | - | chr3.1:85716991-85717010 | MS.gene014788:CDS | 40.0% | |
| ! | AACAGGGTTAGTGAGTAATG+TGG | - | chr3.1:85717669-85717688 | MS.gene014788:intron | 40.0% |
| ! | ACCAGCTTTGCAGTAGATTT+TGG | + | chr3.1:85717616-85717635 | None:intergenic | 40.0% |
| ! | CGCCAGATGACTATCTTTTA+TGG | - | chr3.1:85715912-85715931 | MS.gene014788:intron | 40.0% |
| ! | GGATCTAGAACTGGAATCAA+AGG | - | chr3.1:85715645-85715664 | MS.gene014788:intron | 40.0% |
| ! | TGATGATGTCCACCAACATA+AGG | - | chr3.1:85715953-85715972 | MS.gene014788:intron | 40.0% |
| !! | AGTTCTAGATCCTTCATCAG+CGG | + | chr3.1:85715637-85715656 | None:intergenic | 40.0% |
| !! | GCATCAATCTTAGTGTTGGT+GGG | + | chr3.1:85715465-85715484 | None:intergenic | 40.0% |
| !! | TTAAGCTTTGGGTACACTGA+TGG | - | chr3.1:85716405-85716424 | MS.gene014788:intron | 40.0% |
| !! | TTAGGAGTACTTACCAGAAG+CGG | + | chr3.1:85714437-85714456 | None:intergenic | 40.0% |
| !!! | ACCACAGACCGAGTTTTTTA+AGG | + | chr3.1:85716082-85716101 | None:intergenic | 40.0% |
| !!! | GCGAGTTTTGAAAGGAATCA+GGG | + | chr3.1:85715203-85715222 | None:intergenic | 40.0% |
| !!! | TGCGAGTTTTGAAAGGAATC+AGG | + | chr3.1:85715204-85715223 | None:intergenic | 40.0% |
| !!! | TGGTTTTTGGTAAAGCCCAA+AGG | + | chr3.1:85717309-85717328 | None:intergenic | 40.0% |
| AACTTCCCATGAAGCTCTTG+TGG | + | chr3.1:85717700-85717719 | None:intergenic | 45.0% | |
| AAGGTTGGACCTTATGTTGG+TGG | + | chr3.1:85715965-85715984 | None:intergenic | 45.0% | |
| ACTTCCCATGAAGCTCTTGT+GGG | + | chr3.1:85717699-85717718 | None:intergenic | 45.0% | |
| AGCAGTAGCAGCTGTGTTTA+TGG | + | chr3.1:85715688-85715707 | None:intergenic | 45.0% | |
| CATTCCCACAAGAGCTTCAT+GGG | - | chr3.1:85717692-85717711 | MS.gene014788:intron | 45.0% | |
| CCCTGAAATCTTAACCAAGC+AGG | - | chr3.1:85716662-85716681 | MS.gene014788:intron | 45.0% | |
| CCCTGCTTGGTTAAGATTTC+AGG | + | chr3.1:85716666-85716685 | None:intergenic | 45.0% | |
| CGGTCTATTCTCATGAATGC+TGG | - | chr3.1:85715498-85715517 | MS.gene014788:intron | 45.0% | |
| CTCCAGAGATGCCTTTCAAA+TGG | - | chr3.1:85715176-85715195 | MS.gene014788:intron | 45.0% | |
| GCAGGCTGAGAGATAAATGA+AGG | + | chr3.1:85715615-85715634 | None:intergenic | 45.0% | |
| GGAATCAGGGACCATTTGAA+AGG | + | chr3.1:85715190-85715209 | None:intergenic | 45.0% | |
| GGAGTAGATACACGATCAAC+AGG | + | chr3.1:85717757-85717776 | None:intergenic | 45.0% | |
| GGGCTGAATGAGAATCAAAG+AGG | + | chr3.1:85716882-85716901 | None:intergenic | 45.0% | |
| GTACTTACCAGAAGCGGTTT+CGG | + | chr3.1:85714431-85714450 | None:intergenic | 45.0% | |
| GTATTGAGCAGCAGTCAACA+TGG | - | chr3.1:85715873-85715892 | MS.gene014788:intron | 45.0% | |
| GTCCGCCTCAAAATTCTTGA+TGG | + | chr3.1:85716520-85716539 | None:intergenic | 45.0% | |
| TACACGATCAACAGGTCCAA+CGG | + | chr3.1:85717749-85717768 | None:intergenic | 45.0% | |
| TCACTTCTTGGGCCATAGAA+CGG | + | chr3.1:85715081-85715100 | None:intergenic | 45.0% | |
| TCTGGAGGAACCCATAAATG+AGG | + | chr3.1:85715163-85715182 | None:intergenic | 45.0% | |
| TTATAGATGTGAAGCCTGCC+CGG | - | chr3.1:85716851-85716870 | MS.gene014788:intron | 45.0% | |
| ! | ATTTCATCTGCAGTGCTGCT+CGG | - | chr3.1:85715717-85715736 | MS.gene014788:intron | 45.0% |
| ! | CATGACTTTTGCACGCTCTT+TGG | - | chr3.1:85717521-85717540 | MS.gene014788:CDS | 45.0% |
| ! | CGCATCAATCTTAGTGTTGG+TGG | + | chr3.1:85715466-85715485 | None:intergenic | 45.0% |
| ! | GAAGCTAGTTGGTGTGCAAA+AGG | + | chr3.1:85715564-85715583 | None:intergenic | 45.0% |
| ! | GCTCTTTTGTCTTCGGAACT+GGG | + | chr3.1:85718319-85718338 | None:intergenic | 45.0% |
| ! | GCTGATGAAGGATCTAGAAC+TGG | - | chr3.1:85715636-85715655 | MS.gene014788:intron | 45.0% |
| ! | GGCCCAAGAAGTGATTTTTC+TGG | - | chr3.1:85715087-85715106 | MS.gene014788:CDS | 45.0% |
| ! | TCACTGCGCTCTTTTGTCTT+CGG | + | chr3.1:85718326-85718345 | None:intergenic | 45.0% |
| !! | ATGGCTTTAGCTGGGTCAAA+TGG | - | chr3.1:85717565-85717584 | MS.gene014788:CDS | 45.0% |
| !! | CAGGTATCGAATCATCTCGA+GGG | - | chr3.1:85715051-85715070 | MS.gene014788:CDS | 45.0% |
| !! | CATTTGAAAGGCATCTCTGG+AGG | + | chr3.1:85715178-85715197 | None:intergenic | 45.0% |
| !! | GACCATTTGAAAGGCATCTC+TGG | + | chr3.1:85715181-85715200 | None:intergenic | 45.0% |
| !! | GGAGTTGATTGTTTTCGCCT+TGG | - | chr3.1:85714655-85714674 | MS.gene014788:intron | 45.0% |
| !! | TCAATCTTAGTGTTGGTGGG+TGG | + | chr3.1:85715462-85715481 | None:intergenic | 45.0% |
| AAAGATAGTCATCTGGCGGC+TGG | + | chr3.1:85715910-85715929 | None:intergenic | 50.0% | |
| ACCCAAGACAATAGGGTGCA+GGG | - | chr3.1:85716964-85716983 | MS.gene014788:CDS | 50.0% | |
| AGAACTGGAATCAAAGGCCC+CGG | - | chr3.1:85715651-85715670 | MS.gene014788:intron | 50.0% | |
| AGAATCAAAGAGGGGACTCC+GGG | + | chr3.1:85716872-85716891 | None:intergenic | 50.0% | |
| ATAGATTTACCTTGGGGGCG+TGG | + | chr3.1:85715784-85715803 | None:intergenic | 50.0% | |
| CATGGGAAGTTGTCTGCTAC+TGG | - | chr3.1:85717709-85717728 | MS.gene014788:intron | 50.0% | |
| CGGAGGACCTGTACAAAAAC+AGG | + | chr3.1:85715339-85715358 | None:intergenic | 50.0% | |
| CTGATACTTCCACCGACGTT+AGG | - | chr3.1:85714344-85714363 | MS.gene014788:CDS | 50.0% | |
| GAGAATCAAAGAGGGGACTC+CGG | + | chr3.1:85716873-85716892 | None:intergenic | 50.0% | |
| GATCGTGTATCTACTCCAGC+CGG | - | chr3.1:85717760-85717779 | MS.gene014788:intron | 50.0% | |
| GCATTCCCACAAGAGCTTCA+TGG | - | chr3.1:85717691-85717710 | MS.gene014788:intron | 50.0% | |
| GCTTTAGCTGGGTCAAATGG+TGG | - | chr3.1:85717568-85717587 | MS.gene014788:CDS | 50.0% | |
| GTGGGGTAGGAAAACTGTAG+TGG | - | chr3.1:85717004-85717023 | MS.gene014788:CDS | 50.0% | |
| GTTAGACATGCACTCCCTGA+AGG | - | chr3.1:85716579-85716598 | MS.gene014788:intron | 50.0% | |
| TACCCAAGACAATAGGGTGC+AGG | - | chr3.1:85716963-85716982 | MS.gene014788:CDS | 50.0% | |
| TATGCTTGAGGATTACCGGC+TGG | + | chr3.1:85717778-85717797 | None:intergenic | 50.0% | |
| TCCCTGCACCCTATTGTCTT+GGG | + | chr3.1:85716968-85716987 | None:intergenic | 50.0% | |
| TCTCTCCTCCAGACGCATTT+CGG | + | chr3.1:85715359-85715378 | None:intergenic | 50.0% | |
| TGCTTGAACCGTCGGATTTC+TGG | + | chr3.1:85718290-85718309 | None:intergenic | 50.0% | |
| TTCCACCGACGTTAGGTTAC+CGG | - | chr3.1:85714351-85714370 | MS.gene014788:CDS | 50.0% | |
| TTCCCTGCACCCTATTGTCT+TGG | + | chr3.1:85716969-85716988 | None:intergenic | 50.0% | |
| TTGGTACGGGCAAGGTCTAA+AGG | + | chr3.1:85718099-85718118 | None:intergenic | 50.0% | |
| ! | CGCGCAGTTTTCGATCTCAA+CGG | + | chr3.1:85717976-85717995 | None:intergenic | 50.0% |
| ! | CGCTCTTTTGTCTTCGGAAC+TGG | + | chr3.1:85718320-85718339 | None:intergenic | 50.0% |
| !! | AACGTCGGTGGAAGTATCAG+TGG | + | chr3.1:85714344-85714363 | None:intergenic | 50.0% |
| !! | ACGTCGGTGGAAGTATCAGT+GGG | + | chr3.1:85714343-85714362 | None:intergenic | 50.0% |
| !! | CTGGGTCAAATGGTGGATCT+TGG | - | chr3.1:85717575-85717594 | MS.gene014788:CDS | 50.0% |
| !! | GCAGGTATCGAATCATCTCG+AGG | - | chr3.1:85715050-85715069 | MS.gene014788:CDS | 50.0% |
| !! | TATTCGAGTTGGTACGGGCA+AGG | + | chr3.1:85718107-85718126 | None:intergenic | 50.0% |
| AGGAGCTCTGTTGCTCCTTC+AGG | + | chr3.1:85716597-85716616 | None:intergenic | 55.0% | |
| CTAGATCCTTCATCAGCGGC+AGG | + | chr3.1:85715633-85715652 | None:intergenic | 55.0% | |
| CTCGAGGGAGTTCCGTTCTA+TGG | - | chr3.1:85715066-85715085 | MS.gene014788:CDS | 55.0% | |
| CTGGAGGAGAGAGATCGAGA+AGG | - | chr3.1:85715367-85715386 | MS.gene014788:intron | 55.0% | |
| CTTACCAGAAGCGGTTTCGG+AGG | + | chr3.1:85714428-85714447 | None:intergenic | 55.0% | |
| GATCAACAGGTCCAACGGCA+CGG | + | chr3.1:85717744-85717763 | None:intergenic | 55.0% | |
| GGAGCTCTGTTGCTCCTTCA+GGG | + | chr3.1:85716596-85716615 | None:intergenic | 55.0% | |
| TAGAATCATCCACGCCCCCA+AGG | - | chr3.1:85715772-85715791 | MS.gene014788:intron | 55.0% | |
| TGCCTCCGGTAACCTAACGT+CGG | + | chr3.1:85714359-85714378 | None:intergenic | 55.0% | |
| TTTCGGAGGTGGGGGAGAAA+GGG | + | chr3.1:85714414-85714433 | None:intergenic | 55.0% | |
| ! | GCACGCTCTTTGGTGTATGC+AGG | - | chr3.1:85717531-85717550 | MS.gene014788:CDS | 55.0% |
| ! | GGATCTGCTGCTTGAACCGT+CGG | + | chr3.1:85718298-85718317 | None:intergenic | 55.0% |
| ACCAGAAGCGGTTTCGGAGG+TGG | + | chr3.1:85714425-85714444 | None:intergenic | 60.0% | |
| AGAAGCGGTTTCGGAGGTGG+GGG | + | chr3.1:85714422-85714441 | None:intergenic | 60.0% | |
| ATAGTCATCTGGCGGCTGGC+AGG | + | chr3.1:85715906-85715925 | None:intergenic | 60.0% | |
| CACCGACGTTAGGTTACCGG+AGG | - | chr3.1:85714354-85714373 | MS.gene014788:CDS | 60.0% | |
| CAGAAGCGGTTTCGGAGGTG+GGG | + | chr3.1:85714423-85714442 | None:intergenic | 60.0% | |
| CAGGTCCTCCGAAATGCGTC+TGG | - | chr3.1:85715348-85715367 | MS.gene014788:intron | 60.0% | |
| CCAGAAGCGGTTTCGGAGGT+GGG | + | chr3.1:85714424-85714443 | None:intergenic | 60.0% | |
| CCTTGATGCGCCCCTACAAC+CGG | + | chr3.1:85718247-85718266 | None:intergenic | 60.0% | |
| CTCCGGTAACCTAACGTCGG+TGG | + | chr3.1:85714356-85714375 | None:intergenic | 60.0% | |
| CTCCTCCAGACGCATTTCGG+AGG | + | chr3.1:85715356-85715375 | None:intergenic | 60.0% | |
| GAGGCTGATGCTGATGCCTC+CGG | + | chr3.1:85714373-85714392 | None:intergenic | 60.0% | |
| GCGGAGGATGCTGCATGGAA+GGG | + | chr3.1:85715524-85715543 | None:intergenic | 60.0% | |
| GGAGTCAACTGTCCTGCACG+CGG | + | chr3.1:85715543-85715562 | None:intergenic | 60.0% | |
| GTCCTCCGAAATGCGTCTGG+AGG | - | chr3.1:85715351-85715370 | MS.gene014788:intron | 60.0% | |
| GTTTCGGAGGTGGGGGAGAA+AGG | + | chr3.1:85714415-85714434 | None:intergenic | 60.0% | |
| TCTCAGCCTGCCGCTGATGA+AGG | - | chr3.1:85715624-85715643 | MS.gene014788:intron | 60.0% | |
| ! | TCATCTGCAGTGCTGCTCGG+TGG | - | chr3.1:85715720-85715739 | MS.gene014788:intron | 60.0% |
| ATGCAGCATCCTCCGCGTGC+AGG | - | chr3.1:85715528-85715547 | MS.gene014788:intron | 65.0% | |
| CCCACCTCCGAAACCGCTTC+TGG | - | chr3.1:85714421-85714440 | MS.gene014788:intron | 65.0% | |
| CGCGGAGGATGCTGCATGGA+AGG | + | chr3.1:85715525-85715544 | None:intergenic | 65.0% | |
| GCTCGAGTCGAGACCCTGCT+TGG | + | chr3.1:85716679-85716698 | None:intergenic | 65.0% | |
| GGAGAAAGGGCCACGAGCAC+CGG | + | chr3.1:85714401-85714420 | None:intergenic | 65.0% | |
| GTCAACTGTCCTGCACGCGG+AGG | + | chr3.1:85715540-85715559 | None:intergenic | 65.0% | |
| TCAAAGAGGGGACTCCGGGC+AGG | + | chr3.1:85716868-85716887 | None:intergenic | 65.0% | |
| TCAGCATCAGCCTCCTCCGC+CGG | - | chr3.1:85714379-85714398 | MS.gene014788:CDS | 65.0% | |
| TGCACGCGGAGGATGCTGCA+TGG | + | chr3.1:85715529-85715548 | None:intergenic | 65.0% | |
| ! | CCGGTTGTAGGGGCGCATCA+AGG | - | chr3.1:85718244-85718263 | MS.gene014788:CDS | 65.0% |
| ! | GGCAGTTCTAGCCGTGCCGT+TGG | - | chr3.1:85717730-85717749 | MS.gene014788:intron | 65.0% |
| !! | GAAAGGGCCACGAGCACCGG+CGG | + | chr3.1:85714398-85714417 | None:intergenic | 70.0% |
| ! | GCCTCCTCCGCCGGTGCTCG+TGG | - | chr3.1:85714388-85714407 | MS.gene014788:CDS | 80.0% |
| !!! | AGGGCCACGAGCACCGGCGG+AGG | + | chr3.1:85714395-85714414 | None:intergenic | 80.0% |
| !!! | GCCACGAGCACCGGCGGAGG+AGG | + | chr3.1:85714392-85714411 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 85714334 | 85718345 | 85714334 | ID=MS.gene014788 |
| chr3.1 | mRNA | 85714334 | 85718345 | 85714334 | ID=MS.gene014788.t1;Parent=MS.gene014788 |
| chr3.1 | exon | 85718237 | 85718345 | 85718237 | ID=MS.gene014788.t1.exon1;Parent=MS.gene014788.t1 |
| chr3.1 | CDS | 85718237 | 85718345 | 85718237 | ID=cds.MS.gene014788.t1;Parent=MS.gene014788.t1 |
| chr3.1 | exon | 85717446 | 85717633 | 85717446 | ID=MS.gene014788.t1.exon2;Parent=MS.gene014788.t1 |
| chr3.1 | CDS | 85717446 | 85717633 | 85717446 | ID=cds.MS.gene014788.t1;Parent=MS.gene014788.t1 |
| chr3.1 | exon | 85716886 | 85717328 | 85716886 | ID=MS.gene014788.t1.exon3;Parent=MS.gene014788.t1 |
| chr3.1 | CDS | 85716886 | 85717328 | 85716886 | ID=cds.MS.gene014788.t1;Parent=MS.gene014788.t1 |
| chr3.1 | exon | 85716705 | 85716795 | 85716705 | ID=MS.gene014788.t1.exon4;Parent=MS.gene014788.t1 |
| chr3.1 | CDS | 85716705 | 85716795 | 85716705 | ID=cds.MS.gene014788.t1;Parent=MS.gene014788.t1 |
| chr3.1 | exon | 85714898 | 85715126 | 85714898 | ID=MS.gene014788.t1.exon5;Parent=MS.gene014788.t1 |
| chr3.1 | CDS | 85714898 | 85715126 | 85714898 | ID=cds.MS.gene014788.t1;Parent=MS.gene014788.t1 |
| chr3.1 | exon | 85714334 | 85714425 | 85714334 | ID=MS.gene014788.t1.exon6;Parent=MS.gene014788.t1 |
| chr3.1 | CDS | 85714334 | 85714425 | 85714334 | ID=cds.MS.gene014788.t1;Parent=MS.gene014788.t1 |
| Gene Sequence |
| Protein sequence |
