AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene014889

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene014889.t1 MTR_3g106220 98.450 645 10 0 1 645 1 645 0.0 1317
MS.gene014889.t1 MTR_1g013170 48.217 589 194 17 6 577 3 497 1.92e-150 444
MS.gene014889.t1 MTR_2g450070 39.628 699 331 17 6 642 16 685 1.07e-134 410
MS.gene014889.t1 MTR_2g450070 46.906 501 221 9 6 483 16 494 6.52e-130 397
MS.gene014889.t1 MTR_1g013180 54.756 431 149 13 6 413 154 561 3.98e-128 393
MS.gene014889.t1 MTR_1g013180 32.394 213 91 11 434 632 501 674 2.18e-11 67.4
MS.gene014889.t1 MTR_7g117705 59.184 343 102 6 6 338 3 317 2.42e-117 358
MS.gene014889.t1 MTR_2g034960 48.747 359 149 7 6 357 27 357 5.85e-100 318
MS.gene014889.t1 MTR_1g032570 55.290 293 119 3 4 286 7 297 1.04e-97 312
MS.gene014889.t1 MTR_4g121020 57.565 271 83 3 6 263 29 280 3.53e-97 313
MS.gene014889.t1 MTR_4g121020 57.565 271 83 3 6 263 29 280 3.73e-97 313
MS.gene014889.t1 MTR_4g131580 41.483 499 260 11 2 489 11 488 1.57e-96 309
MS.gene014889.t1 MTR_4g131600 50.000 334 146 5 5 330 17 337 8.02e-93 298
MS.gene014889.t1 MTR_4g131570 51.064 329 145 4 8 328 17 337 2.30e-92 298
MS.gene014889.t1 MTR_3g086100 53.289 304 115 5 8 310 13 290 4.16e-91 293
MS.gene014889.t1 MTR_3g102590 61.011 277 48 5 1 273 1 221 1.19e-90 281
MS.gene014889.t1 MTR_8g079940 56.343 268 95 4 6 265 23 276 7.54e-89 286
MS.gene014889.t1 MTR_3g102590 59.677 248 43 3 1 247 1 192 2.89e-78 247
MS.gene014889.t1 MTR_1g032570 55.217 230 91 3 67 286 1 228 2.75e-71 241
MS.gene014889.t1 MTR_3g102600 83.459 133 22 0 1 133 1 133 4.97e-69 223
MS.gene014889.t1 MTR_3g102600 73.585 53 14 0 197 249 131 183 1.79e-20 90.1
MS.gene014889.t1 MTR_3g102600 83.459 133 22 0 1 133 1 133 8.86e-68 221
MS.gene014889.t1 MTR_3g102600 60.870 115 21 1 197 311 131 221 1.71e-39 145
MS.gene014889.t1 MTR_3g086100 51.837 245 91 5 67 310 1 219 6.74e-64 219
MS.gene014889.t1 MTR_4g021760 41.270 252 116 4 3 254 6 225 6.94e-52 181
MS.gene014889.t1 MTR_1g013160 63.399 153 50 2 70 221 1 148 8.71e-51 173
MS.gene014889.t1 MTR_4g121020 50.000 190 63 3 87 263 6 176 8.90e-49 180
MS.gene014889.t1 MTR_4g021790 39.516 248 118 3 8 255 10 225 1.68e-47 168
MS.gene014889.t1 MTR_4g021855 38.306 248 121 4 8 255 10 225 1.00e-45 164
MS.gene014889.t1 MTR_4g021845 38.750 240 115 3 8 247 10 217 1.22e-45 161
MS.gene014889.t1 MTR_3g102600 82.143 84 15 0 50 133 1 84 1.50e-42 150
MS.gene014889.t1 MTR_3g102600 73.585 53 14 0 197 249 82 134 2.53e-21 90.9
MS.gene014889.t1 MTR_0450s0040 36.179 246 130 3 12 256 8 227 3.02e-42 156
MS.gene014889.t1 MTR_3g102600 82.143 84 15 0 50 133 1 84 1.05e-40 147
MS.gene014889.t1 MTR_3g102600 60.345 116 22 1 197 312 82 173 1.16e-39 144
MS.gene014889.t1 MTR_8g105600 36.630 273 159 5 5 276 6 265 1.76e-39 153
MS.gene014889.t1 MTR_6g045327 36.078 255 129 5 1 254 7 228 4.38e-38 145
MS.gene014889.t1 MTR_7g026400 36.771 223 121 3 35 257 14 216 3.05e-36 144
MS.gene014889.t1 MTR_5g055260 34.274 248 104 8 8 255 10 198 4.90e-30 119
MS.gene014889.t1 MTR_8g032710 29.297 256 161 6 11 250 20 271 1.91e-25 110
MS.gene014889.t1 MTR_3g092780 31.677 161 98 3 12 161 56 215 5.16e-23 104
MS.gene014889.t1 MTR_3g092780 31.677 161 98 3 12 161 56 215 6.18e-23 104
MS.gene014889.t1 MTR_3g092780 37.097 124 73 2 12 131 56 178 1.15e-22 103
MS.gene014889.t1 MTR_3g092780 37.097 124 73 2 12 131 56 178 1.52e-22 102
MS.gene014889.t1 MTR_4g064730 46.667 105 53 1 164 265 94 198 4.73e-22 97.8
MS.gene014889.t1 MTR_4g023980 32.934 167 81 3 58 224 39 174 1.03e-21 93.2
MS.gene014889.t1 MTR_7g118260 32.039 206 115 5 1 198 1 189 2.05e-21 99.0
MS.gene014889.t1 MTR_6g016850 33.548 155 96 4 5 157 6 155 2.14e-21 92.0
MS.gene014889.t1 MTR_1g067110 37.705 122 73 2 12 130 85 206 2.28e-21 99.4
MS.gene014889.t1 MTR_1g067110 37.705 122 73 2 12 130 85 206 2.32e-21 99.4
MS.gene014889.t1 MTR_7g118260 35.915 142 80 3 1 134 1 139 2.53e-21 98.6
MS.gene014889.t1 MTR_4g061360 39.344 122 71 1 12 130 89 210 2.79e-21 99.4
MS.gene014889.t1 MTR_8g093040 36.923 130 82 0 1 130 7 136 3.53e-21 94.4
MS.gene014889.t1 MTR_7g089010 56.000 75 32 1 186 259 78 152 6.69e-21 94.0
MS.gene014889.t1 MTR_8g024260 34.868 152 88 2 14 162 38 181 1.03e-20 97.1
MS.gene014889.t1 MTR_6g453220 66.667 75 24 1 214 287 379 453 2.19e-20 95.5
MS.gene014889.t1 MTR_3g037390 34.677 124 78 1 12 132 24 147 2.28e-19 92.4
MS.gene014889.t1 MTR_4g108880 33.582 134 84 2 4 132 23 156 8.26e-18 87.8
MS.gene014889.t1 MTR_2g090675 45.455 88 48 0 178 265 141 228 1.05e-17 86.3
MS.gene014889.t1 MTR_4g078810 50.685 73 36 0 193 265 153 225 1.12e-17 86.3
MS.gene014889.t1 MTR_5g014040 56.061 66 29 0 191 256 304 369 1.30e-17 87.0
MS.gene014889.t1 MTR_5g014040 37.097 124 74 2 8 130 14 134 2.34e-13 73.6
MS.gene014889.t1 MTR_4g098870 60.656 61 24 0 196 256 308 368 4.11e-17 85.5
MS.gene014889.t1 MTR_4g098870 33.065 124 79 2 8 130 14 134 7.04e-12 68.9
MS.gene014889.t1 MTR_4g098870 60.656 61 24 0 196 256 328 388 4.45e-17 85.5
MS.gene014889.t1 MTR_4g098870 33.065 124 79 2 8 130 34 154 1.00e-11 68.2
MS.gene014889.t1 MTR_4g098870 60.656 61 24 0 196 256 308 368 4.67e-17 85.1
MS.gene014889.t1 MTR_4g098870 33.065 124 79 2 8 130 14 134 1.62e-11 67.8
MS.gene014889.t1 MTR_4g098870 60.656 61 24 0 196 256 328 388 5.10e-17 85.1
MS.gene014889.t1 MTR_4g098870 33.065 124 79 2 8 130 34 154 2.01e-11 67.4
MS.gene014889.t1 MTR_4g098870 60.656 61 24 0 196 256 347 407 5.22e-17 85.1
MS.gene014889.t1 MTR_4g098870 33.065 124 79 2 8 130 53 173 1.29e-11 68.2
MS.gene014889.t1 MTR_3g084390 48.101 79 31 2 1 69 1 79 9.08e-16 73.2
MS.gene014889.t1 MTR_5g014040 52.113 71 29 1 191 256 264 334 1.13e-15 80.5
MS.gene014889.t1 MTR_5g014040 52.113 71 29 1 191 256 304 374 1.28e-15 80.5
MS.gene014889.t1 MTR_5g014040 37.097 124 74 2 8 130 14 134 2.56e-13 73.2
MS.gene014889.t1 MTR_5g017980 39.516 124 64 4 197 318 191 305 7.07e-15 76.6
MS.gene014889.t1 MTR_5g017980 39.516 124 64 4 197 318 192 306 7.28e-15 76.6
MS.gene014889.t1 MTR_4g086835 38.679 106 50 2 197 298 273 367 6.28e-14 74.7
MS.gene014889.t1 MTR_5g017980 39.200 125 64 5 197 318 192 307 7.54e-14 73.6
MS.gene014889.t1 MTR_7g115530 62.500 56 20 1 196 250 216 271 1.29e-13 72.4
MS.gene014889.t1 MTR_6g088950 25.843 178 123 2 10 178 5 182 1.83e-13 70.5
MS.gene014889.t1 MTR_1g093080 45.679 81 42 2 191 269 204 284 1.92e-13 72.8
MS.gene014889.t1 MTR_7g115530 62.500 56 20 1 196 250 216 271 2.01e-13 72.4
MS.gene014889.t1 MTR_7g115530 62.500 56 20 1 196 250 216 271 2.77e-13 72.0
MS.gene014889.t1 MTR_7g115530 62.500 56 20 1 196 250 216 271 4.55e-13 72.0
MS.gene014889.t1 MTR_1g080330 56.897 58 24 1 194 250 171 228 7.63e-13 70.1
MS.gene014889.t1 MTR_1g080330 56.897 58 24 1 194 250 171 228 1.17e-12 70.5
MS.gene014889.t1 MTR_5g054300 40.230 87 50 2 185 270 186 271 1.77e-12 69.7
MS.gene014889.t1 MTR_4g086835 38.318 107 50 3 197 298 273 368 1.82e-12 70.1
MS.gene014889.t1 MTR_5g041350 50.847 59 28 1 194 251 11 69 1.87e-11 66.6
MS.gene014889.t1 MTR_4g113140 48.387 62 31 1 197 257 234 295 4.98e-11 65.9
MS.gene014889.t1 MTR_6g032990 49.153 59 29 1 194 251 38 96 9.17e-11 64.7
MS.gene014889.t1 MTR_2g086450 49.153 59 29 1 194 251 41 99 9.33e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene014889.t1 AT2G25180 52.752 436 155 13 6 419 11 417 5.04e-128 390
MS.gene014889.t1 AT4G31920 53.117 369 109 9 6 355 11 334 2.79e-109 340
MS.gene014889.t1 AT3G16857 55.674 282 93 5 8 266 33 305 9.61e-95 306
MS.gene014889.t1 AT3G16857 55.674 282 93 5 8 266 33 305 2.49e-94 305
MS.gene014889.t1 AT5G58080 49.319 367 145 9 2 349 8 352 3.90e-92 298
MS.gene014889.t1 AT2G01760 56.538 260 110 3 6 262 5 264 3.60e-86 275
MS.gene014889.t1 AT1G67710 57.769 251 97 4 9 256 8 252 7.00e-82 268
MS.gene014889.t1 AT2G01760 51.042 288 110 4 6 262 5 292 6.13e-80 259
MS.gene014889.t1 AT3G16857 54.733 243 78 5 47 266 2 235 2.71e-75 253
MS.gene014889.t1 AT2G01760 54.774 199 87 3 67 262 1 199 2.17e-56 194
MS.gene014889.t1 AT1G67710 57.513 193 73 4 67 256 1 187 3.15e-55 195
MS.gene014889.t1 AT5G49240 39.167 240 141 2 8 247 38 272 1.62e-51 180
MS.gene014889.t1 AT3G62670 37.091 275 144 6 2 267 31 285 4.67e-42 158
MS.gene014889.t1 AT1G67710 52.601 173 73 4 87 256 12 178 5.17e-41 155
MS.gene014889.t1 AT1G49190 35.547 256 150 5 7 255 29 276 6.98e-40 151
MS.gene014889.t1 AT5G07210 29.683 347 197 10 10 328 14 341 1.65e-34 139
MS.gene014889.t1 AT5G07210 29.014 355 197 11 10 328 14 349 4.44e-32 132
MS.gene014889.t1 AT2G27070 30.576 278 154 8 10 256 14 283 3.95e-28 119
MS.gene014889.t1 AT2G46790 36.082 194 99 6 12 185 37 225 1.90e-25 110
MS.gene014889.t1 AT2G46790 36.082 194 99 6 12 185 37 225 2.53e-25 110
MS.gene014889.t1 AT1G49190 39.200 125 76 0 7 131 29 153 3.97e-25 110
MS.gene014889.t1 AT5G24470 35.294 170 94 5 6 168 42 202 1.32e-23 105
MS.gene014889.t1 AT5G59570 55.172 87 36 2 180 263 120 206 4.21e-23 100
MS.gene014889.t1 AT5G59570 55.172 87 36 2 180 263 120 206 4.21e-23 100
MS.gene014889.t1 AT3G46640 52.381 84 40 0 182 265 128 211 9.95e-23 100
MS.gene014889.t1 AT3G46640 52.381 84 40 0 182 265 128 211 9.95e-23 100
MS.gene014889.t1 AT3G46640 53.086 81 38 0 182 262 128 208 1.43e-22 99.8
MS.gene014889.t1 AT1G68210 26.937 271 171 4 12 257 13 281 5.08e-22 101
MS.gene014889.t1 AT5G60100 37.795 127 75 2 8 130 59 185 1.29e-21 98.2
MS.gene014889.t1 AT5G60100 37.795 127 75 2 8 130 59 185 1.29e-21 98.2
MS.gene014889.t1 AT5G60100 37.795 127 75 2 8 130 59 185 1.29e-21 98.2
MS.gene014889.t1 AT5G60100 37.795 127 75 2 8 130 59 185 1.79e-21 98.6
MS.gene014889.t1 AT5G60100 37.795 127 75 2 8 130 59 185 1.79e-21 98.6
MS.gene014889.t1 AT5G60100 37.795 127 75 2 8 130 59 185 1.79e-21 98.6
MS.gene014889.t1 AT5G60100 37.795 127 75 2 8 130 59 185 4.18e-21 97.8
MS.gene014889.t1 AT2G40970 65.000 60 21 0 197 256 104 163 8.85e-21 92.8
MS.gene014889.t1 AT5G05090 65.000 60 21 0 197 256 80 139 1.18e-20 92.8
MS.gene014889.t1 AT3G10760 65.000 60 21 0 197 256 104 163 1.21e-20 94.0
MS.gene014889.t1 AT5G02810 38.525 122 72 1 12 130 78 199 1.49e-20 96.7
MS.gene014889.t1 AT5G44190 59.155 71 29 0 196 266 145 215 3.63e-20 93.2
MS.gene014889.t1 AT5G44190 59.155 71 29 0 196 266 145 215 4.66e-20 93.2
MS.gene014889.t1 AT5G61380 34.677 124 78 1 12 132 19 142 6.41e-19 91.3
MS.gene014889.t1 AT2G20570 43.878 98 51 1 159 256 118 211 2.19e-17 85.5
MS.gene014889.t1 AT4G18020 41.748 103 53 1 161 256 252 354 3.09e-16 82.4
MS.gene014889.t1 AT4G18020 34.559 136 80 3 6 134 12 145 3.15e-13 72.8
MS.gene014889.t1 AT4G18020 41.748 103 53 1 161 256 252 354 3.09e-16 82.4
MS.gene014889.t1 AT4G18020 34.559 136 80 3 6 134 12 145 3.15e-13 72.8
MS.gene014889.t1 AT4G18020 41.748 103 53 1 161 256 252 354 3.09e-16 82.4
MS.gene014889.t1 AT4G18020 34.559 136 80 3 6 134 12 145 3.15e-13 72.8
MS.gene014889.t1 AT4G18020 41.748 103 53 1 161 256 252 354 3.09e-16 82.4
MS.gene014889.t1 AT4G18020 34.559 136 80 3 6 134 12 145 3.15e-13 72.8
MS.gene014889.t1 AT4G18020 41.748 103 53 1 161 256 252 354 3.09e-16 82.4
MS.gene014889.t1 AT4G18020 34.559 136 80 3 6 134 12 145 3.15e-13 72.8
MS.gene014889.t1 AT4G18020 41.748 103 53 1 161 256 252 354 3.09e-16 82.4
MS.gene014889.t1 AT4G18020 34.559 136 80 3 6 134 12 145 3.15e-13 72.8
MS.gene014889.t1 AT4G18020 41.748 103 53 1 161 256 252 354 3.50e-16 82.4
MS.gene014889.t1 AT4G18020 34.559 136 80 3 6 134 12 145 5.02e-13 72.4
MS.gene014889.t1 AT4G18020 41.748 103 53 1 161 256 252 354 3.50e-16 82.4
MS.gene014889.t1 AT4G18020 34.559 136 80 3 6 134 12 145 5.02e-13 72.4
MS.gene014889.t1 AT4G18020 41.748 103 53 1 161 256 252 354 3.50e-16 82.4
MS.gene014889.t1 AT4G18020 34.559 136 80 3 6 134 12 145 5.02e-13 72.4
MS.gene014889.t1 AT4G18020 41.748 103 53 1 161 256 252 354 3.50e-16 82.4
MS.gene014889.t1 AT4G18020 34.559 136 80 3 6 134 12 145 5.02e-13 72.4
MS.gene014889.t1 AT4G18020 41.748 103 53 1 161 256 252 354 3.50e-16 82.4
MS.gene014889.t1 AT4G18020 34.559 136 80 3 6 134 12 145 5.02e-13 72.4
MS.gene014889.t1 AT2G20570 61.404 57 22 0 200 256 171 227 5.92e-16 81.3
MS.gene014889.t1 AT1G68670 31.818 154 90 4 181 333 198 337 7.43e-13 70.9
MS.gene014889.t1 AT4G13640 42.708 96 39 3 198 282 37 127 2.92e-12 68.2
MS.gene014889.t1 AT4G13640 42.708 96 39 3 198 282 37 127 3.04e-12 68.2
MS.gene014889.t1 AT1G49560 38.182 110 61 3 195 298 189 297 7.89e-12 67.4
MS.gene014889.t1 AT3G24120 42.105 95 39 3 198 281 41 130 1.24e-11 66.6
MS.gene014889.t1 AT3G24120 42.105 95 39 3 198 281 41 130 1.24e-11 66.6
MS.gene014889.t1 AT1G25550 51.667 60 28 1 197 255 208 267 1.43e-11 67.0
MS.gene014889.t1 AT3G04030 50.847 59 28 1 194 251 41 99 3.07e-11 66.2
MS.gene014889.t1 AT3G04030 50.847 59 28 1 194 251 41 99 3.51e-11 65.9
MS.gene014889.t1 AT2G03500 46.875 64 33 1 195 257 230 293 3.61e-11 66.2
MS.gene014889.t1 AT4G37180 49.180 61 30 1 196 255 208 268 4.68e-11 65.5
MS.gene014889.t1 AT4G37180 49.180 61 30 1 196 255 215 275 5.84e-11 65.1
MS.gene014889.t1 AT4G00760 27.670 206 121 8 30 215 1 198 7.31e-11 64.7
MS.gene014889.t1 AT1G10470 32.061 131 77 2 14 132 22 152 7.57e-11 63.5
MS.gene014889.t1 AT1G10470 32.061 131 77 2 14 132 36 166 8.55e-11 63.5

Find 163 sgRNAs with CRISPR-Local

Find 321 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTTGATCCGGGAATTTATT+TGG 0.160454 3.3:+87178816 None:intergenic
GCAAGATAAGATGAAATTAT+TGG 0.247006 3.3:-87177516 MS.gene014889:CDS
TCCAACTTGTCTCATGGTTT+TGG 0.250920 3.3:-87181461 MS.gene014889:CDS
TCAAGCGACGTACCGTTATC+TGG 0.285277 3.3:-87178597 MS.gene014889:CDS
ACATTTGGCAGCATGTAATT+AGG 0.295640 3.3:-87179965 MS.gene014889:CDS
TCCAGCATGCTTCATTTGTA+TGG 0.304531 3.3:+87178245 None:intergenic
ATTCCTTGGGAGTGCATATC+TGG 0.307526 3.3:+87178462 None:intergenic
TATTTGAGAATGGGTGGTTC+TGG 0.310707 3.3:-87179140 MS.gene014889:CDS
TTGAAGAGAAAGAATTTGTT+TGG 0.311046 3.3:+87178571 None:intergenic
CGTTAATCAGAATATTCTTC+AGG 0.324708 3.3:-87178937 MS.gene014889:CDS
TGAACTTGTGGGACTTGAAA+TGG 0.326717 3.3:-87180237 MS.gene014889:CDS
GCTAGTATGGTGGCAGCCTT+AGG 0.331673 3.3:-87179179 MS.gene014889:CDS
GCAGAAAATTCAGATGAAAA+TGG 0.333558 3.3:-87179852 MS.gene014889:CDS
GTTGATCCGGGAATTTATTT+GGG 0.335841 3.3:+87178817 None:intergenic
TCCCATCCCAAATAAATTCC+CGG 0.335864 3.3:-87178823 MS.gene014889:CDS
CCCTTGCAAGCGGGGTATCC+TGG 0.337535 3.3:-87178495 MS.gene014889:CDS
AATTGTTTAAATTACGTGAT+TGG 0.348210 3.3:+87179000 None:intergenic
GCAAAACTTGGCCGTTGATC+CGG 0.363698 3.3:+87178804 None:intergenic
AACTCTCTTGCTCCAGTTAA+CGG 0.366243 3.3:-87178330 MS.gene014889:CDS
AGAAGAAGCCTCGGGTTGTT+TGG 0.367984 3.3:-87179743 MS.gene014889:CDS
TAGAGGAGCTAAAGAACATT+TGG 0.372140 3.3:-87179980 MS.gene014889:CDS
CTGGAATTTAAGTTGATCAT+TGG 0.373200 3.3:+87178974 None:intergenic
TCCTTCGGGGCTTCTTCAGT+TGG 0.386130 3.3:-87179024 MS.gene014889:CDS
CTGAAGAATATTCTGATTAA+CGG 0.389124 3.3:+87178938 None:intergenic
TCTTGGTTCACTGGAATACT+TGG 0.389557 3.3:-87178145 MS.gene014889:CDS
AACGGTAATTTGCCATTTCA+AGG 0.393348 3.3:-87178411 MS.gene014889:CDS
CTGCCACCATACTAGCTTGT+TGG 0.395940 3.3:+87179186 None:intergenic
CGGTCTTCCCATCCTTGAAA+TGG 0.402240 3.3:+87178399 None:intergenic
GAAAGAAAACACGGAGGTAT+AGG 0.402851 3.3:-87178714 MS.gene014889:CDS
GCTGAAACCTGTGAGATTAG+AGG 0.402851 3.3:-87179997 MS.gene014889:CDS
AACACTCCAACTAGTCTTAA+CGG 0.404206 3.3:-87179059 MS.gene014889:CDS
TTCTAATAATCTTGGTTCAC+TGG 0.404941 3.3:-87178154 MS.gene014889:CDS
ATTCTGATTAACGGGAGTTA+TGG 0.410279 3.3:+87178947 None:intergenic
CCTTCGGGGCTTCTTCAGTT+GGG 0.414763 3.3:-87179023 MS.gene014889:CDS
CAAGATAAGATGAAATTATT+GGG 0.416183 3.3:-87177515 MS.gene014889:CDS
ATTTCAGTGTTGTCTGCATA+TGG 0.417968 3.3:-87180071 MS.gene014889:intron
CACGCATTCCGATGGGAAAA+CGG 0.428750 3.3:+87181503 None:intergenic
AAGGTAGGCACGGTGATAAT+TGG 0.437512 3.3:-87178620 MS.gene014889:CDS
CGAGGCTTCTTCTGAGCTGA+TGG 0.438400 3.3:+87179753 None:intergenic
AAACACGGAGGTATAGGAAT+AGG 0.439930 3.3:-87178708 MS.gene014889:CDS
TGCAAACCAACAAGCTAGTA+TGG 0.442595 3.3:-87179192 MS.gene014889:CDS
AGGTGGAGCTAGTTGTTGTC+TGG 0.446742 3.3:+87178289 None:intergenic
AGATCAATCTTATTTGAGAA+TGG 0.446802 3.3:-87179150 MS.gene014889:CDS
GAACTAGAGGTGGCAAAACT+TGG 0.447157 3.3:+87178792 None:intergenic
GTTGCTGCTGTTAATCAGTT+AGG 0.449852 3.3:-87179696 MS.gene014889:CDS
TGAAGAATATTCTGATTAAC+GGG 0.453613 3.3:+87178939 None:intergenic
GATCAATCTTATTTGAGAAT+GGG 0.453918 3.3:-87179149 MS.gene014889:CDS
ATCCGGGAATTTATTTGGGA+TGG 0.454627 3.3:+87178821 None:intergenic
AGCTTAAATCCATCCATGTC+AGG 0.455967 3.3:+87180263 None:intergenic
GGTAAGTAGCATCCTGATTA+CGG 0.456384 3.3:+87178379 None:intergenic
GACTAAGAAAAGAAAGGATC+AGG 0.456770 3.3:-87179823 MS.gene014889:CDS
GCTTCTTTGCCCTTGCAAGC+GGG 0.456904 3.3:-87178504 MS.gene014889:CDS
GGAGGTATAGGAATAGGATA+TGG 0.457148 3.3:-87178702 MS.gene014889:CDS
TGCTGGCTTATGATATTAGC+TGG 0.457220 3.3:+87178183 None:intergenic
GGCTTCTTTGCCCTTGCAAG+CGG 0.465152 3.3:-87178505 MS.gene014889:CDS
CAAAACTTGGCCGTTGATCC+GGG 0.465888 3.3:+87178805 None:intergenic
GAAGATGAGGATAAAGAGAA+TGG 0.467439 3.3:-87179792 MS.gene014889:CDS
AATTCACCTGAGTATATAAA+CGG 0.467724 3.3:-87178429 MS.gene014889:CDS
GAGCTAGTTGTTGTCTGGCC+TGG 0.468240 3.3:+87178294 None:intergenic
GATTATTAGAAAACTTCTGC+TGG 0.476268 3.3:+87178166 None:intergenic
TCCAAAACCATGAGACAAGT+TGG 0.479542 3.3:+87181460 None:intergenic
AATTATCCCACTAGGTGAAA+AGG 0.479567 3.3:+87179091 None:intergenic
ACACTCCAACTAGTCTTAAC+GGG 0.480069 3.3:-87179058 MS.gene014889:CDS
CGACGATCCAACTTGTCTCA+TGG 0.481091 3.3:-87181467 MS.gene014889:CDS
CCAGCATGCTTCATTTGTAT+GGG 0.481160 3.3:+87178246 None:intergenic
TTTAGCTCCTCTAATCTCAC+AGG 0.481770 3.3:+87179990 None:intergenic
AGGATGGGAAGACCGTAATC+AGG 0.483908 3.3:-87178391 MS.gene014889:CDS
TTTAAGCTGCTTGAACTTGT+GGG 0.484142 3.3:-87180248 MS.gene014889:CDS
ACCAGGATACCCCGCTTGCA+AGG 0.485505 3.3:+87178494 None:intergenic
TGTTTGAGATACCGAGACTT+GGG 0.488772 3.3:+87178763 None:intergenic
TCCGGGAATTTATTTGGGAT+GGG 0.491640 3.3:+87178822 None:intergenic
CCATGCCCGTTAAGACTAGT+TGG 0.492442 3.3:+87179053 None:intergenic
CAGGGAATGCCAATGTCCAT+AGG 0.498172 3.3:-87178918 MS.gene014889:CDS
CCCATACAAATGAAGCATGC+TGG 0.498373 3.3:-87178246 MS.gene014889:CDS
GTTAATCAGAATATTCTTCA+GGG 0.498546 3.3:-87178936 MS.gene014889:CDS
TCCGATGGGAAAACGGTCAC+CGG 0.502454 3.3:+87181510 None:intergenic
TCTTTCTCTATGCTGGATCA+AGG 0.503800 3.3:-87178639 MS.gene014889:CDS
GTAATTTGCCATTTCAAGGA+TGG 0.513037 3.3:-87178407 MS.gene014889:CDS
GAAGAAGAAGTCTGATCCAA+AGG 0.514805 3.3:-87179943 MS.gene014889:CDS
GACAAAACTACTTCTGATAG+TGG 0.516959 3.3:-87179897 MS.gene014889:CDS
GAACGTGGCAAGCCATCTCC+AGG 0.523004 3.3:-87179334 MS.gene014889:intron
TTTGTTTGGATTCCAGATAA+CGG 0.525042 3.3:+87178585 None:intergenic
ATTTAAGCTGCTTGAACTTG+TGG 0.531591 3.3:-87180249 MS.gene014889:CDS
ATACTTGGCGAGTTCAATGA+TGG 0.533419 3.3:-87178130 MS.gene014889:CDS
CTAGTATGGTGGCAGCCTTA+GGG 0.534344 3.3:-87179178 MS.gene014889:CDS
TGTTATTGCTTGACTAGTTG+TGG 0.534638 3.3:+87180349 None:intergenic
CTAGTTGTTGTCTGGCCTGG+TGG 0.535200 3.3:+87178297 None:intergenic
CTTCTTTGCCCTTGCAAGCG+GGG 0.537483 3.3:-87178503 MS.gene014889:CDS
TAATTTGCCATTTCAAGGAT+GGG 0.541605 3.3:-87178406 MS.gene014889:CDS
AAATTACCGTTTATATACTC+AGG 0.541639 3.3:+87178423 None:intergenic
GCCTCGGGTTGTTTGGTCTG+TGG 0.542268 3.3:-87179736 MS.gene014889:CDS
GGCAGTGGACTAAGATCCGC+AGG 0.543371 3.3:-87179876 MS.gene014889:CDS
TTGTTTGAGATACCGAGACT+TGG 0.548378 3.3:+87178762 None:intergenic
TAACGGGAGTTATGGCTGAC+TGG 0.548521 3.3:+87178955 None:intergenic
ACTACTTCTGATAGTGGCAG+TGG 0.549024 3.3:-87179891 MS.gene014889:CDS
TACCACTCAAATGTTACTTG+TGG 0.549615 3.3:-87178360 MS.gene014889:CDS
TGTGCACATCACTGATTACC+AGG 0.551505 3.3:+87180288 None:intergenic
CATCAGCTCAGAAGAAGCCT+CGG 0.554303 3.3:-87179752 MS.gene014889:CDS
GGCGAGAACACGCATTCCGA+TGG 0.558372 3.3:+87181495 None:intergenic
CCAGGATACCCCGCTTGCAA+GGG 0.561131 3.3:+87178495 None:intergenic
CAAATAAATTCCCGGATCAA+CGG 0.562184 3.3:-87178815 MS.gene014889:CDS
AGTCTCGGTATCTCAAACAA+TGG 0.562603 3.3:-87178759 MS.gene014889:CDS
CAGATAATCACAGGCACCAT+GGG 0.562735 3.3:+87180019 None:intergenic
GGCGAGTTCAATGATGGGAC+AGG 0.562860 3.3:-87178124 MS.gene014889:intron
CAATCTTATTTGAGAATGGG+TGG 0.565295 3.3:-87179146 MS.gene014889:CDS
GAGGCTTCTTCTGAGCTGAT+GGG 0.565647 3.3:+87179754 None:intergenic
AAAGCTGACTAAGAAAAGAA+AGG 0.566687 3.3:-87179829 MS.gene014889:CDS
AGGGAATGCCAATGTCCATA+GGG 0.567298 3.3:-87178917 MS.gene014889:CDS
TTGCAAGTGATCAAACCCTA+TGG 0.568247 3.3:+87178902 None:intergenic
TCTCTATGCTGGATCAAGGT+AGG 0.568314 3.3:-87178635 MS.gene014889:CDS
TGATCACTTGCAAAACAGCA+AGG 0.568375 3.3:-87178892 MS.gene014889:CDS
AGATTGATCTGCACTCCCTA+AGG 0.568615 3.3:+87179163 None:intergenic
GACAACAACTAGCTCCACCT+TGG 0.570450 3.3:-87178286 MS.gene014889:CDS
CTCAAACAATGGCTTGATGT+CGG 0.579465 3.3:-87178748 MS.gene014889:CDS
TGTTCCTCCTTCAGATAACA+TGG 0.580834 3.3:-87178526 MS.gene014889:CDS
ATCAGCTCAGAAGAAGCCTC+GGG 0.581453 3.3:-87179751 MS.gene014889:CDS
TATGCGATAATTACTCCGAC+GGG 0.584211 3.3:-87177481 MS.gene014889:CDS
AGATCCCCACTTACTTATGA+CGG 0.584541 3.3:+87180208 None:intergenic
CCAACTAGTCTTAACGGGCA+TGG 0.588692 3.3:-87179053 MS.gene014889:CDS
GTTTGAGATACCGAGACTTG+GGG 0.591845 3.3:+87178764 None:intergenic
GCAGATAATCACAGGCACCA+TGG 0.592029 3.3:+87180018 None:intergenic
TGATCAAACCCTATGGACAT+TGG 0.593062 3.3:+87178909 None:intergenic
TGCATATGGTGATACAAAGC+TGG 0.593897 3.3:-87180057 MS.gene014889:CDS
GATCCCCACTTACTTATGAC+GGG 0.593976 3.3:+87180209 None:intergenic
AGAAAATTCTGAATGTTGAG+AGG 0.594209 3.3:+87178659 None:intergenic
ATATGCGATAATTACTCCGA+CGG 0.598221 3.3:-87177482 MS.gene014889:CDS
GTGCACATGCCTGACATGGA+TGG 0.600433 3.3:-87180272 MS.gene014889:CDS
CCCAACTGAAGAAGCCCCGA+AGG 0.603189 3.3:+87179023 None:intergenic
AGATTACCAATTATCCCACT+AGG 0.605896 3.3:+87179083 None:intergenic
AAAGAAGCCATGTTATCTGA+AGG 0.609057 3.3:+87178519 None:intergenic
AGGTTTCAGCAGATAATCAC+AGG 0.609824 3.3:+87180010 None:intergenic
GATCACTTGCAAAACAGCAA+GGG 0.610593 3.3:-87178891 MS.gene014889:CDS
TGAGCTGCATTCAGTTAACT+CGG 0.614968 3.3:+87178218 None:intergenic
TGATGTGCACATGCCTGACA+TGG 0.615041 3.3:-87180276 MS.gene014889:CDS
TCAGGATGAAGACGAAGATG+AGG 0.615403 3.3:-87179805 MS.gene014889:CDS
ACAAGTTGGATCGTCGTCAA+CGG 0.615563 3.3:+87181474 None:intergenic
GCGAGAACACGCATTCCGAT+GGG 0.617268 3.3:+87181496 None:intergenic
GACCGTGGTATTGACATCTA+CGG 0.617438 3.3:+87181428 None:intergenic
ATATCTGGCAACGAACCACC+AGG 0.619562 3.3:+87178477 None:intergenic
TTGCCAGATATGCACTCCCA+AGG 0.620552 3.3:-87178465 MS.gene014889:CDS
ATGCTGGATCAAGGTAGGCA+CGG 0.622381 3.3:-87178630 MS.gene014889:CDS
GATAAGATGAAATTATTGGG+TGG 0.625103 3.3:-87177512 MS.gene014889:CDS
ATCCACAAGTAACATTTGAG+TGG 0.625700 3.3:+87178358 None:intergenic
CCCACTTACTTATGACGGGA+AGG 0.626480 3.3:+87180213 None:intergenic
GAAGCCATGTTATCTGAAGG+AGG 0.632238 3.3:+87178522 None:intergenic
GATACAAAGCTGGTGATGAA+AGG 0.634012 3.3:-87180047 MS.gene014889:CDS
AAATATCACAAGGGAGAACG+TGG 0.641409 3.3:-87179349 MS.gene014889:CDS
TACTTGGCGAGTTCAATGAT+GGG 0.644216 3.3:-87178129 MS.gene014889:CDS
TTGCAAGCGGGGTATCCTGG+TGG 0.644472 3.3:-87178492 MS.gene014889:CDS
TAACAGCAGCAACAAACTTG+CGG 0.664827 3.3:+87179706 None:intergenic
TCCACAGACCAAACAACCCG+AGG 0.670707 3.3:+87179735 None:intergenic
AAACAAAGACAAGTTTGACC+TGG 0.671629 3.3:-87180306 MS.gene014889:CDS
CTCCGTAGATGTCAATACCA+CGG 0.676022 3.3:-87181430 MS.gene014889:intron
TTTGAGATACCGAGACTTGG+GGG 0.680383 3.3:+87178765 None:intergenic
TGAATGTCGAAAATATCACA+AGG 0.689686 3.3:-87179359 MS.gene014889:CDS
GTGATGAAAGGAATTTCCCA+TGG 0.694201 3.3:-87180035 MS.gene014889:CDS
ACGCACCCTGAAAGAAAACA+CGG 0.699020 3.3:-87178723 MS.gene014889:CDS
AAACCAACAAGCTAGTATGG+TGG 0.708833 3.3:-87179189 MS.gene014889:CDS
GAATGTCGAAAATATCACAA+GGG 0.725612 3.3:-87179358 MS.gene014889:CDS
CTGTCACAAAGATACCCCGT+CGG 0.726754 3.3:+87177466 None:intergenic
ATGCGATAATTACTCCGACG+GGG 0.780483 3.3:-87177480 MS.gene014889:CDS
AGAGAATGGTAATGACAACG+AGG 0.788270 3.3:-87179778 MS.gene014889:CDS
CACCCTGAAAGAAAACACGG+AGG 0.809478 3.3:-87178720 MS.gene014889:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTATTTGAATTTC+TGG + chr3.3:87177750-87177769 None:intergenic 10.0%
!! ATAAAAAAAAACATGTCTTT+AGG - chr3.3:87177759-87177778 MS.gene014889:intron 15.0%
!! ATTAAAAAATTTAGTATCCA+AGG + chr3.3:87180723-87180742 None:intergenic 15.0%
!! TCAAAATGAATAAATAGAAA+AGG + chr3.3:87178840-87178859 None:intergenic 15.0%
!! TGAAATTTGAAGATTTAAAT+TGG - chr3.3:87181134-87181153 MS.gene014889:intron 15.0%
!!! ACATTTTTTGAATATAATGT+TGG - chr3.3:87180893-87180912 MS.gene014889:intron 15.0%
!!! ATATATTTCATTTTGTTTAG+TGG - chr3.3:87178194-87178213 MS.gene014889:CDS 15.0%
!!! ATCATATCAAGAATTTTTTT+GGG + chr3.3:87179611-87179630 None:intergenic 15.0%
!! AAGAACATCAATGAAATATA+TGG + chr3.3:87181190-87181209 None:intergenic 20.0%
!! AATTAGTAAAAATCATTCCT+TGG + chr3.3:87180544-87180563 None:intergenic 20.0%
!! AATTGTTTAAATTACGTGAT+TGG + chr3.3:87179992-87180011 None:intergenic 20.0%
!! AATTTGAAGATTTAAATTGG+TGG - chr3.3:87181137-87181156 MS.gene014889:intron 20.0%
!! ATAATACTCAAATTCAGTAA+TGG + chr3.3:87179555-87179574 None:intergenic 20.0%
!! ATATCTAGTAAAAATATGCT+TGG + chr3.3:87178096-87178115 None:intergenic 20.0%
!! ATTAACACCAAAACAAAAAA+TGG + chr3.3:87178250-87178269 None:intergenic 20.0%
!! ATTAGTAAAAATCATTCCTT+GGG + chr3.3:87180543-87180562 None:intergenic 20.0%
!! CAAGATAAGATGAAATTATT+GGG - chr3.3:87181474-87181493 MS.gene014889:CDS 20.0%
!!! CAATTTTTACAGATTTTATG+TGG - chr3.3:87177960-87177979 MS.gene014889:intron 20.0%
!!! CATCATATCAAGAATTTTTT+TGG + chr3.3:87179612-87179631 None:intergenic 20.0%
!!! CATGTTGTTTTATTTAACTT+AGG - chr3.3:87181335-87181354 MS.gene014889:intron 20.0%
!!! TATTTTTACTAGATATGTGA+AGG - chr3.3:87178100-87178119 MS.gene014889:intron 20.0%
!!! TCAAAATGTTTTTGAATATC+TGG - chr3.3:87179416-87179435 MS.gene014889:intron 20.0%
!!! TGTATAGTTTTTTTTGCATA+TGG - chr3.3:87180952-87180971 MS.gene014889:intron 20.0%
! AAAAAATTTAGTATCCAAGG+TGG + chr3.3:87180720-87180739 None:intergenic 25.0%
! AAATTACCGTTTATATACTC+AGG + chr3.3:87180569-87180588 None:intergenic 25.0%
! AACATGGTATCAAATTACTA+TGG + chr3.3:87181439-87181458 None:intergenic 25.0%
! AACGATATTGTGTAGATATT+TGG - chr3.3:87177819-87177838 MS.gene014889:intron 25.0%
! AAGAAAAAAATTAACAGCTG+AGG + chr3.3:87178817-87178836 None:intergenic 25.0%
! AATTCACCTGAGTATATAAA+CGG - chr3.3:87180560-87180579 MS.gene014889:intron 25.0%
! ACTATGGAAGCAAAATATTT+AGG + chr3.3:87181423-87181442 None:intergenic 25.0%
! ATAAAAATTGTTTGTGTTGC+AGG + chr3.3:87179344-87179363 None:intergenic 25.0%
! ATGAAAAGAGTCATGATTTA+GGG - chr3.3:87177867-87177886 MS.gene014889:intron 25.0%
! ATTTCTTTCACTGAATGTTT+CGG - chr3.3:87179720-87179739 MS.gene014889:CDS 25.0%
! CAAAGACAAGAAAAGAAAAA+TGG + chr3.3:87178450-87178469 None:intergenic 25.0%
! CTGAAGAATATTCTGATTAA+CGG + chr3.3:87180054-87180073 None:intergenic 25.0%
! GCAAGATAAGATGAAATTAT+TGG - chr3.3:87181473-87181492 MS.gene014889:CDS 25.0%
! GTTAATCAGAATATTCTTCA+GGG - chr3.3:87180053-87180072 MS.gene014889:CDS 25.0%
! TAAAGAACTAGAAAAATACC+TGG + chr3.3:87179676-87179695 None:intergenic 25.0%
! TAATGGAATACTTTATGACA+TGG + chr3.3:87179538-87179557 None:intergenic 25.0%
! TACTAATCATGAAGAAATAC+AGG + chr3.3:87178506-87178525 None:intergenic 25.0%
! TATAATCTAATCAGTATGTG+TGG + chr3.3:87181015-87181034 None:intergenic 25.0%
! TGAAGAATATTCTGATTAAC+GGG + chr3.3:87180053-87180072 None:intergenic 25.0%
! TGTTTCTTTATACTATCACA+GGG + chr3.3:87177942-87177961 None:intergenic 25.0%
!! AAGCAAAATATTTAGGACAA+GGG + chr3.3:87181416-87181435 None:intergenic 25.0%
!! AGATCAATCTTATTTGAGAA+TGG - chr3.3:87179839-87179858 MS.gene014889:CDS 25.0%
!! CAGAAGTTTTCTAATAATCT+TGG - chr3.3:87180827-87180846 MS.gene014889:intron 25.0%
!! GATCAATCTTATTTGAGAAT+GGG - chr3.3:87179840-87179859 MS.gene014889:CDS 25.0%
!! GGAACTTTTACTAAGAATAA+AGG - chr3.3:87177840-87177859 MS.gene014889:intron 25.0%
!! TTGAAGAGAAAGAATTTGTT+TGG + chr3.3:87180421-87180440 None:intergenic 25.0%
!! TTGTTTCTTTATACTATCAC+AGG + chr3.3:87177943-87177962 None:intergenic 25.0%
!!! AAACATTTGTTTTTCTATCC+TGG - chr3.3:87181279-87181298 MS.gene014889:intron 25.0%
!!! AAGTGATACTTATTTCTGAT+TGG - chr3.3:87178605-87178624 MS.gene014889:CDS 25.0%
!!! AATGATTTTAAGTCTTCTCT+CGG + chr3.3:87181101-87181120 None:intergenic 25.0%
!!! AGTGATACTTATTTCTGATT+GGG - chr3.3:87178606-87178625 MS.gene014889:CDS 25.0%
!!! CGATGTTTATTTTAAATCCT+AGG - chr3.3:87179441-87179460 MS.gene014889:intron 25.0%
!!! TCATAAGTCATTTTAAACCT+AGG + chr3.3:87179461-87179480 None:intergenic 25.0%
!!! TCATTTTGACTCTTGTTTAT+TGG - chr3.3:87178851-87178870 MS.gene014889:CDS 25.0%
AAAGCTGACTAAGAAAAGAA+AGG - chr3.3:87179160-87179179 MS.gene014889:CDS 30.0%
AAGTCAACACACTATGAATT+TGG + chr3.3:87177902-87177921 None:intergenic 30.0%
ACAACATGCTATATACTCAA+CGG + chr3.3:87181323-87181342 None:intergenic 30.0%
ACTTAATTATGTGCTTGCTT+GGG - chr3.3:87178062-87178081 MS.gene014889:intron 30.0%
AGAAAATTCTGAATGTTGAG+AGG + chr3.3:87180333-87180352 None:intergenic 30.0%
ATAAAATTCAGTAAAGCTCG+AGG + chr3.3:87179380-87179399 None:intergenic 30.0%
ATCCTATGTGAATGTTCTAA+AGG + chr3.3:87181257-87181276 None:intergenic 30.0%
CAAGGAAATAATGTTTGAGA+TGG + chr3.3:87180991-87181010 None:intergenic 30.0%
CGTTAATCAGAATATTCTTC+AGG - chr3.3:87180052-87180071 MS.gene014889:CDS 30.0%
GAAACATTCAGTGAAAGAAA+TGG + chr3.3:87179721-87179740 None:intergenic 30.0%
GAATGTCGAAAATATCACAA+GGG - chr3.3:87179631-87179650 MS.gene014889:intron 30.0%
GATAAGATGAAATTATTGGG+TGG - chr3.3:87181477-87181496 MS.gene014889:CDS 30.0%
GATGAAAAGAGTCATGATTT+AGG - chr3.3:87177866-87177885 MS.gene014889:intron 30.0%
GATTATTAGAAAACTTCTGC+TGG + chr3.3:87180826-87180845 None:intergenic 30.0%
GCAGAAAATTCAGATGAAAA+TGG - chr3.3:87179137-87179156 MS.gene014889:CDS 30.0%
TGAATGTCGAAAATATCACA+AGG - chr3.3:87179630-87179649 MS.gene014889:intron 30.0%
TTCATTGATGTTCTTTGTGA+TGG - chr3.3:87181195-87181214 MS.gene014889:intron 30.0%
TTCTAATAATCTTGGTTCAC+TGG - chr3.3:87180835-87180854 MS.gene014889:intron 30.0%
TTGACTATAACCAAGTGATT+GGG + chr3.3:87178427-87178446 None:intergenic 30.0%
TTTCTTTCACTGAATGTTTC+GGG - chr3.3:87179721-87179740 MS.gene014889:CDS 30.0%
TTTGTTTGGATTCCAGATAA+CGG + chr3.3:87180407-87180426 None:intergenic 30.0%
! AAGCAATGAAGCTCTAATTA+CGG + chr3.3:87178131-87178150 None:intergenic 30.0%
! AGAATTTTCTTTCTCTATGC+TGG - chr3.3:87180343-87180362 MS.gene014889:CDS 30.0%
! AGCAAAATATTTAGGACAAG+GGG + chr3.3:87181415-87181434 None:intergenic 30.0%
! GAAGCAAAATATTTAGGACA+AGG + chr3.3:87181417-87181436 None:intergenic 30.0%
! TAATTTGCCATTTCAAGGAT+GGG - chr3.3:87180583-87180602 MS.gene014889:intron 30.0%
! TTGTTTTCACATCAGTATTC+AGG + chr3.3:87180142-87180161 None:intergenic 30.0%
!! AATGTTTCGGGTTTATGAAA+TGG - chr3.3:87179733-87179752 MS.gene014889:CDS 30.0%
!! ATGATTTTAAGTCTTCTCTC+GGG + chr3.3:87181100-87181119 None:intergenic 30.0%
!! CTGGAATTTAAGTTGATCAT+TGG + chr3.3:87180018-87180037 None:intergenic 30.0%
!! CTTTAGGATCAAATCTAACT+GGG - chr3.3:87177775-87177794 MS.gene014889:intron 30.0%
!! GTGATACTTATTTCTGATTG+GGG - chr3.3:87178607-87178626 MS.gene014889:CDS 30.0%
!! TCTTTAGGATCAAATCTAAC+TGG - chr3.3:87177774-87177793 MS.gene014889:intron 30.0%
!! TTCACTGTTGCTTTCTTTAT+TGG - chr3.3:87178544-87178563 MS.gene014889:CDS 30.0%
!! TTCATTTTGTTTAGTGGCTT+TGG - chr3.3:87178200-87178219 MS.gene014889:CDS 30.0%
!! TTTGTTTTTCTATCCTGGAT+TGG - chr3.3:87181284-87181303 MS.gene014889:intron 30.0%
!!! TAATGTTGTTTTACTTGCAG+AGG - chr3.3:87179580-87179599 MS.gene014889:intron 30.0%
!!! TGGTCAACCATTTTTTGTTT+TGG - chr3.3:87178240-87178259 MS.gene014889:CDS 30.0%
AAACAAAGACAAGTTTGACC+TGG - chr3.3:87178683-87178702 MS.gene014889:CDS 35.0%
AAAGAAGCCATGTTATCTGA+AGG + chr3.3:87180473-87180492 None:intergenic 35.0%
AATATTCCGGAGTTTAGTCA+GGG - chr3.3:87178315-87178334 MS.gene014889:CDS 35.0%
AATTATCCCACTAGGTGAAA+AGG + chr3.3:87179901-87179920 None:intergenic 35.0%
ACAAATATAACCATGCTGAC+TGG + chr3.3:87181071-87181090 None:intergenic 35.0%
ACAAGTTATTGTACCAATCC+AGG + chr3.3:87181300-87181319 None:intergenic 35.0%
ACATTTGGCAGCATGTAATT+AGG - chr3.3:87179024-87179043 MS.gene014889:CDS 35.0%
ACTAGAAAAATACCTGGAGA+TGG + chr3.3:87179670-87179689 None:intergenic 35.0%
AGATTACCAATTATCCCACT+AGG + chr3.3:87179909-87179928 None:intergenic 35.0%
ATATGCGATAATTACTCCGA+CGG - chr3.3:87181507-87181526 MS.gene014889:CDS 35.0%
ATCCACAAGTAACATTTGAG+TGG + chr3.3:87180634-87180653 None:intergenic 35.0%
ATTCTGATTAACGGGAGTTA+TGG + chr3.3:87180045-87180064 None:intergenic 35.0%
ATTTAAGCTGCTTGAACTTG+TGG - chr3.3:87178740-87178759 MS.gene014889:CDS 35.0%
ATTTCAGTGTTGTCTGCATA+TGG - chr3.3:87178918-87178937 MS.gene014889:CDS 35.0%
CAAATAAATTCCCGGATCAA+CGG - chr3.3:87180174-87180193 MS.gene014889:intron 35.0%
CACTTAATTATGTGCTTGCT+TGG - chr3.3:87178061-87178080 MS.gene014889:intron 35.0%
CTAAAGGACATCGAAAGTTA+CGG + chr3.3:87181241-87181260 None:intergenic 35.0%
GAAATGAAATTCATCCCAAG+TGG + chr3.3:87179493-87179512 None:intergenic 35.0%
GAAGATGAGGATAAAGAGAA+TGG - chr3.3:87179197-87179216 MS.gene014889:CDS 35.0%
GACAAAACTACTTCTGATAG+TGG - chr3.3:87179092-87179111 MS.gene014889:CDS 35.0%
GACTAAGAAAAGAAAGGATC+AGG - chr3.3:87179166-87179185 MS.gene014889:CDS 35.0%
GATCAAATCTAACTGGGAAA+TGG - chr3.3:87177781-87177800 MS.gene014889:intron 35.0%
GTTGACTATAACCAAGTGAT+TGG + chr3.3:87178428-87178447 None:intergenic 35.0%
GTTGATCCGGGAATTTATTT+GGG + chr3.3:87180175-87180194 None:intergenic 35.0%
TAAAGTATGCAATGCTCGTT+TGG - chr3.3:87181369-87181388 MS.gene014889:intron 35.0%
TAATATTCCGGAGTTTAGTC+AGG - chr3.3:87178314-87178333 MS.gene014889:CDS 35.0%
TAGAGGAGCTAAAGAACATT+TGG - chr3.3:87179009-87179028 MS.gene014889:CDS 35.0%
TGACTAAACTCCGGAATATT+AGG + chr3.3:87178315-87178334 None:intergenic 35.0%
TGGACTGAATATGCACTTTA+TGG - chr3.3:87178220-87178239 MS.gene014889:CDS 35.0%
TTATGATGATAGATGCCACT+TGG - chr3.3:87179475-87179494 MS.gene014889:intron 35.0%
TTCCCATAAATGCTTCTGTA+TGG - chr3.3:87180918-87180937 MS.gene014889:intron 35.0%
TTTAAGCTGCTTGAACTTGT+GGG - chr3.3:87178741-87178760 MS.gene014889:CDS 35.0%
! AACGGTAATTTGCCATTTCA+AGG - chr3.3:87180578-87180597 MS.gene014889:intron 35.0%
! ACTGTTGTTGCTTAGATTTC+AGG - chr3.3:87178478-87178497 MS.gene014889:CDS 35.0%
! ATGAGCAACTTTTCCTACTA+CGG + chr3.3:87178166-87178185 None:intergenic 35.0%
! CAATCTTATTTGAGAATGGG+TGG - chr3.3:87179843-87179862 MS.gene014889:CDS 35.0%
! GTAATTTGCCATTTCAAGGA+TGG - chr3.3:87180582-87180601 MS.gene014889:intron 35.0%
! TACCACTCAAATGTTACTTG+TGG - chr3.3:87180629-87180648 MS.gene014889:intron 35.0%
! TATGATGATAGATGCCACTT+GGG - chr3.3:87179476-87179495 MS.gene014889:intron 35.0%
! TGTTATTGCTTGACTAGTTG+TGG + chr3.3:87178643-87178662 None:intergenic 35.0%
! TTTTCACCTAGTGGGATAAT+TGG - chr3.3:87179900-87179919 MS.gene014889:CDS 35.0%
!! AACACTCCAACTAGTCTTAA+CGG - chr3.3:87179930-87179949 MS.gene014889:CDS 35.0%
!! AAGCCATACAGAAGCATTTA+TGG + chr3.3:87180924-87180943 None:intergenic 35.0%
!! AGCCATACAGAAGCATTTAT+GGG + chr3.3:87180923-87180942 None:intergenic 35.0%
!! GTCCTTTAGAACATTCACAT+AGG - chr3.3:87181252-87181271 MS.gene014889:intron 35.0%
!!! AGTAGTTTTGTCTGGTTTAC+TGG + chr3.3:87179084-87179103 None:intergenic 35.0%
!!! CTATCAGAAGTAGTTTTGTC+TGG + chr3.3:87179092-87179111 None:intergenic 35.0%
!!! CTGGTTTTGTTTTTCTCCTT+TGG + chr3.3:87179065-87179084 None:intergenic 35.0%
!!! GTCTTTGTTTTCTCTCAACA+TGG + chr3.3:87178673-87178692 None:intergenic 35.0%
AAACCAACAAGCTAGTATGG+TGG - chr3.3:87179800-87179819 MS.gene014889:CDS 40.0%
AAATATCACAAGGGAGAACG+TGG - chr3.3:87179640-87179659 MS.gene014889:intron 40.0%
AACTCTCTTGCTCCAGTTAA+CGG - chr3.3:87180659-87180678 MS.gene014889:intron 40.0%
AGATCCCCACTTACTTATGA+CGG + chr3.3:87178784-87178803 None:intergenic 40.0%
AGCTTAAATCCATCCATGTC+AGG + chr3.3:87178729-87178748 None:intergenic 40.0%
AGGTTTCAGCAGATAATCAC+AGG + chr3.3:87178982-87179001 None:intergenic 40.0%
AGTCTCGGTATCTCAAACAA+TGG - chr3.3:87180230-87180249 MS.gene014889:CDS 40.0%
ATACTTGGCGAGTTCAATGA+TGG - chr3.3:87180859-87180878 MS.gene014889:intron 40.0%
ATCCGGGAATTTATTTGGGA+TGG + chr3.3:87180171-87180190 None:intergenic 40.0%
CCAGCATGCTTCATTTGTAT+GGG + chr3.3:87180746-87180765 None:intergenic 40.0%
CGAAAGTTACGGTGGTTAAT+TGG + chr3.3:87181230-87181249 None:intergenic 40.0%
CGTTGATCCGGGAATTTATT+TGG + chr3.3:87180176-87180195 None:intergenic 40.0%
CTAAACTCCGGAATATTAGG+AGG + chr3.3:87178312-87178331 None:intergenic 40.0%
CTAATCAGTATGTGTGGTCA+AGG + chr3.3:87181009-87181028 None:intergenic 40.0%
CTCAAACAATGGCTTGATGT+CGG - chr3.3:87180241-87180260 MS.gene014889:CDS 40.0%
GAAGAAGAAGTCTGATCCAA+AGG - chr3.3:87179046-87179065 MS.gene014889:CDS 40.0%
GATCACTTGCAAAACAGCAA+GGG - chr3.3:87180098-87180117 MS.gene014889:intron 40.0%
GGTAAGTAGCATCCTGATTA+CGG + chr3.3:87180613-87180632 None:intergenic 40.0%
GTGATGAAAGGAATTTCCCA+TGG - chr3.3:87178954-87178973 MS.gene014889:CDS 40.0%
GTTGCTGCTGTTAATCAGTT+AGG - chr3.3:87179293-87179312 MS.gene014889:intron 40.0%
TAACAGCAGCAACAAACTTG+CGG + chr3.3:87179286-87179305 None:intergenic 40.0%
TACTTGGCGAGTTCAATGAT+GGG - chr3.3:87180860-87180879 MS.gene014889:intron 40.0%
TAGAGCTTCATTGCTTGTAG+AGG - chr3.3:87178135-87178154 MS.gene014889:CDS 40.0%
TATGCGATAATTACTCCGAC+GGG - chr3.3:87181508-87181527 MS.gene014889:CDS 40.0%
TATTTGAGAATGGGTGGTTC+TGG - chr3.3:87179849-87179868 MS.gene014889:CDS 40.0%
TCCAAAACCATGAGACAAGT+TGG + chr3.3:87177532-87177551 None:intergenic 40.0%
TCCAGCATGCTTCATTTGTA+TGG + chr3.3:87180747-87180766 None:intergenic 40.0%
TCCCATCCCAAATAAATTCC+CGG - chr3.3:87180166-87180185 MS.gene014889:intron 40.0%
TCTAACTGGGAAATGGAGTT+AGG - chr3.3:87177788-87177807 MS.gene014889:intron 40.0%
TCTTGGTTCACTGGAATACT+TGG - chr3.3:87180844-87180863 MS.gene014889:intron 40.0%
TCTTTCTCTATGCTGGATCA+AGG - chr3.3:87180350-87180369 MS.gene014889:CDS 40.0%
TGAACTTGTGGGACTTGAAA+TGG - chr3.3:87178752-87178771 MS.gene014889:CDS 40.0%
TGAGCTGCATTCAGTTAACT+CGG + chr3.3:87180774-87180793 None:intergenic 40.0%
TGATCAAACCCTATGGACAT+TGG + chr3.3:87180083-87180102 None:intergenic 40.0%
TGATCACTTGCAAAACAGCA+AGG - chr3.3:87180097-87180116 MS.gene014889:intron 40.0%
TGATTGGGATCAAGAGGTTA+AGG + chr3.3:87178412-87178431 None:intergenic 40.0%
TGCAAACCAACAAGCTAGTA+TGG - chr3.3:87179797-87179816 MS.gene014889:CDS 40.0%
TGCATATGGTGATACAAAGC+TGG - chr3.3:87178932-87178951 MS.gene014889:CDS 40.0%
TGTTCCTCCTTCAGATAACA+TGG - chr3.3:87180463-87180482 MS.gene014889:intron 40.0%
TTGCAAGTGATCAAACCCTA+TGG + chr3.3:87180090-87180109 None:intergenic 40.0%
! AAACACGGAGGTATAGGAAT+AGG - chr3.3:87180281-87180300 MS.gene014889:CDS 40.0%
! AGAGAATGGTAATGACAACG+AGG - chr3.3:87179211-87179230 MS.gene014889:CDS 40.0%
! ATACCTCCGTGTTTTCTTTC+AGG + chr3.3:87180275-87180294 None:intergenic 40.0%
! ATCTGAATTTTCTGCTCCTG+CGG + chr3.3:87179132-87179151 None:intergenic 40.0%
! GAAAGAAAACACGGAGGTAT+AGG - chr3.3:87180275-87180294 MS.gene014889:CDS 40.0%
! GAGTCATGATTTAGGGTCAA+AGG - chr3.3:87177874-87177893 MS.gene014889:intron 40.0%
! GATACAAAGCTGGTGATGAA+AGG - chr3.3:87178942-87178961 MS.gene014889:CDS 40.0%
! GGAGGTATAGGAATAGGATA+TGG - chr3.3:87180287-87180306 MS.gene014889:CDS 40.0%
! TACCTCCGTGTTTTCTTTCA+GGG + chr3.3:87180274-87180293 None:intergenic 40.0%
! TCAGATCCTTTTCACCTAGT+GGG - chr3.3:87179892-87179911 MS.gene014889:CDS 40.0%
! TCCAACTTGTCTCATGGTTT+TGG - chr3.3:87177528-87177547 MS.gene014889:intron 40.0%
! TCCGGGAATTTATTTGGGAT+GGG + chr3.3:87180170-87180189 None:intergenic 40.0%
! TGTTTGAGATACCGAGACTT+GGG + chr3.3:87180229-87180248 None:intergenic 40.0%
! TTCAGATCCTTTTCACCTAG+TGG - chr3.3:87179891-87179910 MS.gene014889:CDS 40.0%
! TTGTTTGAGATACCGAGACT+TGG + chr3.3:87180230-87180249 None:intergenic 40.0%
! TTTAGCTCCTCTAATCTCAC+AGG + chr3.3:87179002-87179021 None:intergenic 40.0%
!! ACACTCCAACTAGTCTTAAC+GGG - chr3.3:87179931-87179950 MS.gene014889:CDS 40.0%
!! TGCTGGCTTATGATATTAGC+TGG + chr3.3:87180809-87180828 None:intergenic 40.0%
AAGACATACTCCAGTCAGCA+TGG - chr3.3:87181058-87181077 MS.gene014889:intron 45.0%
AAGGACATCGAAAGTTACGG+TGG + chr3.3:87181238-87181257 None:intergenic 45.0%
AAGGTAGGCACGGTGATAAT+TGG - chr3.3:87180369-87180388 MS.gene014889:intron 45.0%
ACCAAGTGATTGGGATCAAG+AGG + chr3.3:87178418-87178437 None:intergenic 45.0%
ACCTCTTGATCCCAATCACT+TGG - chr3.3:87178414-87178433 MS.gene014889:CDS 45.0%
ACCTTCCCGTCATAAGTAAG+TGG - chr3.3:87178775-87178794 MS.gene014889:CDS 45.0%
ACGCACCCTGAAAGAAAACA+CGG - chr3.3:87180266-87180285 MS.gene014889:CDS 45.0%
AGATTGATCTGCACTCCCTA+AGG + chr3.3:87179829-87179848 None:intergenic 45.0%
AGGGAATGCCAATGTCCATA+GGG - chr3.3:87180072-87180091 MS.gene014889:intron 45.0%
ATGCGATAATTACTCCGACG+GGG - chr3.3:87181509-87181528 MS.gene014889:CDS 45.0%
CAGATAATCACAGGCACCAT+GGG + chr3.3:87178973-87178992 None:intergenic 45.0%
CCCATACAAATGAAGCATGC+TGG - chr3.3:87180743-87180762 MS.gene014889:intron 45.0%
CCTTCCCGTCATAAGTAAGT+GGG - chr3.3:87178776-87178795 MS.gene014889:CDS 45.0%
CTCCGTAGATGTCAATACCA+CGG - chr3.3:87177559-87177578 MS.gene014889:intron 45.0%
CTCTCGAATGATTCCTCCTA+GGG - chr3.3:87178381-87178400 MS.gene014889:CDS 45.0%
CTTCCCGTCATAAGTAAGTG+GGG - chr3.3:87178777-87178796 MS.gene014889:CDS 45.0%
GAACTAGAGGTGGCAAAACT+TGG + chr3.3:87180200-87180219 None:intergenic 45.0%
GAAGCCATGTTATCTGAAGG+AGG + chr3.3:87180470-87180489 None:intergenic 45.0%
GATCCCCACTTACTTATGAC+GGG + chr3.3:87178783-87178802 None:intergenic 45.0%
GCTGAAACCTGTGAGATTAG+AGG - chr3.3:87178992-87179011 MS.gene014889:CDS 45.0%
GTCAATACCACGGTCAGATT+CGG - chr3.3:87177569-87177588 MS.gene014889:intron 45.0%
GTCAGGGAGGTAATTGAACT+CGG - chr3.3:87178331-87178350 MS.gene014889:CDS 45.0%
TCAGGATGAAGACGAAGATG+AGG - chr3.3:87179184-87179203 MS.gene014889:CDS 45.0%
TCAGGGAGGTAATTGAACTC+GGG - chr3.3:87178332-87178351 MS.gene014889:CDS 45.0%
TCTCGAATGATTCCTCCTAG+GGG - chr3.3:87178382-87178401 MS.gene014889:CDS 45.0%
TCTCTATGCTGGATCAAGGT+AGG - chr3.3:87180354-87180373 MS.gene014889:CDS 45.0%
TCTCTCGAATGATTCCTCCT+AGG - chr3.3:87178380-87178399 MS.gene014889:CDS 45.0%
TGTAGAGGTAGTACCGTAGT+AGG - chr3.3:87178150-87178169 MS.gene014889:CDS 45.0%
TTACCTCCCTGACTAAACTC+CGG + chr3.3:87178324-87178343 None:intergenic 45.0%
! ACAAGTTGGATCGTCGTCAA+CGG + chr3.3:87177518-87177537 None:intergenic 45.0%
! ATTCCTTGGGAGTGCATATC+TGG + chr3.3:87180530-87180549 None:intergenic 45.0%
! GTTTGAGATACCGAGACTTG+GGG + chr3.3:87180228-87180247 None:intergenic 45.0%
! TGTGCACATCACTGATTACC+AGG + chr3.3:87178704-87178723 None:intergenic 45.0%
! TTTGAGATACCGAGACTTGG+GGG + chr3.3:87180227-87180246 None:intergenic 45.0%
!! ACTACTTCTGATAGTGGCAG+TGG - chr3.3:87179098-87179117 MS.gene014889:CDS 45.0%
!! GACCGTGGTATTGACATCTA+CGG + chr3.3:87177564-87177583 None:intergenic 45.0%
ACTAGATCCGAATCTGACCG+TGG + chr3.3:87177579-87177598 None:intergenic 50.0%
ACTTGGGGGATGAGAACTAG+AGG + chr3.3:87180213-87180232 None:intergenic 50.0%
AGAACCCGAGCTTGATTCAC+AGG + chr3.3:87178363-87178382 None:intergenic 50.0%
AGGATGGGAAGACCGTAATC+AGG - chr3.3:87180598-87180617 MS.gene014889:intron 50.0%
AGGTGGAGCTAGTTGTTGTC+TGG + chr3.3:87180703-87180722 None:intergenic 50.0%
AGTTCTCATCCCCCAAGTCT+CGG - chr3.3:87180215-87180234 MS.gene014889:intron 50.0%
ATATCTGGCAACGAACCACC+AGG + chr3.3:87180515-87180534 None:intergenic 50.0%
ATCAGCTCAGAAGAAGCCTC+GGG - chr3.3:87179238-87179257 MS.gene014889:intron 50.0%
ATGCTGGATCAAGGTAGGCA+CGG - chr3.3:87180359-87180378 MS.gene014889:intron 50.0%
ATTCCGGAGTTTAGTCAGGG+AGG - chr3.3:87178318-87178337 MS.gene014889:CDS 50.0%
CAAAACTTGGCCGTTGATCC+GGG + chr3.3:87180187-87180206 None:intergenic 50.0%
CACCCTGAAAGAAAACACGG+AGG - chr3.3:87180269-87180288 MS.gene014889:CDS 50.0%
CACGCATTCCGATGGGAAAA+CGG + chr3.3:87177489-87177508 None:intergenic 50.0%
CAGGGAATGCCAATGTCCAT+AGG - chr3.3:87180071-87180090 MS.gene014889:intron 50.0%
CATCAGCTCAGAAGAAGCCT+CGG - chr3.3:87179237-87179256 MS.gene014889:intron 50.0%
CCATGCCCGTTAAGACTAGT+TGG + chr3.3:87179939-87179958 None:intergenic 50.0%
CGACGATCCAACTTGTCTCA+TGG - chr3.3:87177522-87177541 MS.gene014889:intron 50.0%
CGGTCTTCCCATCCTTGAAA+TGG + chr3.3:87180593-87180612 None:intergenic 50.0%
CTAGTATGGTGGCAGCCTTA+GGG - chr3.3:87179811-87179830 MS.gene014889:CDS 50.0%
CTCGAATGATTCCTCCTAGG+GGG - chr3.3:87178383-87178402 MS.gene014889:CDS 50.0%
GACAACAACTAGCTCCACCT+TGG - chr3.3:87180703-87180722 MS.gene014889:intron 50.0%
GAGGCTTCTTCTGAGCTGAT+GGG + chr3.3:87179238-87179257 None:intergenic 50.0%
GCAAAACTTGGCCGTTGATC+CGG + chr3.3:87180188-87180207 None:intergenic 50.0%
GCAGATAATCACAGGCACCA+TGG + chr3.3:87178974-87178993 None:intergenic 50.0%
GGAAAAACGGCACCGTTAAC+TGG + chr3.3:87180674-87180693 None:intergenic 50.0%
GTTAATCCTCCTGCTCTCGA+GGG - chr3.3:87178264-87178283 MS.gene014889:CDS 50.0%
TAACGGGAGTTATGGCTGAC+TGG + chr3.3:87180037-87180056 None:intergenic 50.0%
TCAAGCGACGTACCGTTATC+TGG - chr3.3:87180392-87180411 MS.gene014889:intron 50.0%
TCGAATGATTCCTCCTAGGG+GGG - chr3.3:87178384-87178403 MS.gene014889:CDS 50.0%
TGATGTGCACATGCCTGACA+TGG - chr3.3:87178713-87178732 MS.gene014889:CDS 50.0%
TGTCTGGCCTGGTGGAAAAA+CGG + chr3.3:87180687-87180706 None:intergenic 50.0%
TGTTAATCCTCCTGCTCTCG+AGG - chr3.3:87178263-87178282 MS.gene014889:CDS 50.0%
TTCCGCCTGTGAATCAAGCT+CGG - chr3.3:87178355-87178374 MS.gene014889:CDS 50.0%
TTGCCAGATATGCACTCCCA+AGG - chr3.3:87180524-87180543 MS.gene014889:intron 50.0%
! AGAAGAAGCCTCGGGTTGTT+TGG - chr3.3:87179246-87179265 MS.gene014889:intron 50.0%
! CCCACTTACTTATGACGGGA+AGG + chr3.3:87178779-87178798 None:intergenic 50.0%
! CGGGCATGGATTTTCTCCTT+CGG - chr3.3:87179950-87179969 MS.gene014889:CDS 50.0%
! CTGCCACCATACTAGCTTGT+TGG + chr3.3:87179806-87179825 None:intergenic 50.0%
! GGCATGGATTTTCTCCTTCG+GGG - chr3.3:87179952-87179971 MS.gene014889:CDS 50.0%
! GGGCATGGATTTTCTCCTTC+GGG - chr3.3:87179951-87179970 MS.gene014889:CDS 50.0%
!! CCAACTAGTCTTAACGGGCA+TGG - chr3.3:87179936-87179955 MS.gene014889:CDS 50.0%
ACCCGAGCTTGATTCACAGG+CGG + chr3.3:87178360-87178379 None:intergenic 55.0%
CCTTCGGGGCTTCTTCAGTT+GGG - chr3.3:87179966-87179985 MS.gene014889:CDS 55.0%
CGAGGCTTCTTCTGAGCTGA+TGG + chr3.3:87179239-87179258 None:intergenic 55.0%
CTAGTTGTTGTCTGGCCTGG+TGG + chr3.3:87180695-87180714 None:intergenic 55.0%
CTTCTTTGCCCTTGCAAGCG+GGG - chr3.3:87180486-87180505 MS.gene014889:intron 55.0%
GAGCTAGTTGTTGTCTGGCC+TGG + chr3.3:87180698-87180717 None:intergenic 55.0%
GCGAGAACACGCATTCCGAT+GGG + chr3.3:87177496-87177515 None:intergenic 55.0%
GCTAGTATGGTGGCAGCCTT+AGG - chr3.3:87179810-87179829 MS.gene014889:CDS 55.0%
GCTTCTTTGCCCTTGCAAGC+GGG - chr3.3:87180485-87180504 MS.gene014889:intron 55.0%
GGCTTCTTTGCCCTTGCAAG+CGG - chr3.3:87180484-87180503 MS.gene014889:intron 55.0%
GGGGAGGCCTCCTAATATTC+CGG - chr3.3:87178302-87178321 MS.gene014889:CDS 55.0%
GTGCACATGCCTGACATGGA+TGG - chr3.3:87178717-87178736 MS.gene014889:CDS 55.0%
TCCACAGACCAAACAACCCG+AGG + chr3.3:87179257-87179276 None:intergenic 55.0%
TCCGATGGGAAAACGGTCAC+CGG + chr3.3:87177482-87177501 None:intergenic 55.0%
TCCGCCTGTGAATCAAGCTC+GGG - chr3.3:87178356-87178375 MS.gene014889:CDS 55.0%
TCCTTCGGGGCTTCTTCAGT+TGG - chr3.3:87179965-87179984 MS.gene014889:CDS 55.0%
TGGGGGATGAGAACTAGAGG+TGG + chr3.3:87180210-87180229 None:intergenic 55.0%
! CCGACGGGGTATCTTTGTGA+AGG - chr3.3:87181523-87181542 MS.gene014889:CDS 55.0%
! GGCGAGTTCAATGATGGGAC+AGG - chr3.3:87180865-87180884 MS.gene014889:intron 55.0%
! TCCGGTGACCGTTTTCCCAT+CGG - chr3.3:87177478-87177497 MS.gene014889:CDS 55.0%
!!! AACGGTGCCGTTTTTCCACC+AGG - chr3.3:87180677-87180696 MS.gene014889:intron 55.0%
ACCAGGATACCCCGCTTGCA+AGG + chr3.3:87180498-87180517 None:intergenic 60.0%
AGAGGTTAAGGAGCCCCCCT+AGG + chr3.3:87178400-87178419 None:intergenic 60.0%
AGGGAAGGACCCCTCTCAAG+GGG - chr3.3:87178283-87178302 MS.gene014889:CDS 60.0%
ATCCTCCTGCTCTCGAGGGA+AGG - chr3.3:87178268-87178287 MS.gene014889:CDS 60.0%
CCAGGATACCCCGCTTGCAA+GGG + chr3.3:87180497-87180516 None:intergenic 60.0%
CCCAACTGAAGAAGCCCCGA+AGG + chr3.3:87179969-87179988 None:intergenic 60.0%
GAACGTGGCAAGCCATCTCC+AGG - chr3.3:87179655-87179674 MS.gene014889:intron 60.0%
GAGGGAAGGACCCCTCTCAA+GGG - chr3.3:87178282-87178301 MS.gene014889:CDS 60.0%
GGCGAGAACACGCATTCCGA+TGG + chr3.3:87177497-87177516 None:intergenic 60.0%
TAGGAGGCCTCCCCTTGAGA+GGG + chr3.3:87178296-87178315 None:intergenic 60.0%
TTAGGAGGCCTCCCCTTGAG+AGG + chr3.3:87178297-87178316 None:intergenic 60.0%
! GCCTCGGGTTGTTTGGTCTG+TGG - chr3.3:87179253-87179272 MS.gene014889:intron 60.0%
! TTGCAAGCGGGGTATCCTGG+TGG - chr3.3:87180497-87180516 MS.gene014889:intron 60.0%
!! GGCAGTGGACTAAGATCCGC+AGG - chr3.3:87179113-87179132 MS.gene014889:CDS 60.0%
AGGAGGCCTCCCCTTGAGAG+GGG + chr3.3:87178295-87178314 None:intergenic 65.0%
CGAGGGAAGGACCCCTCTCA+AGG - chr3.3:87178281-87178300 MS.gene014889:CDS 65.0%
GAAGGACCCCTCTCAAGGGG+AGG - chr3.3:87178286-87178305 MS.gene014889:CDS 65.0%
GGTTAAGGAGCCCCCCTAGG+AGG + chr3.3:87178397-87178416 None:intergenic 65.0%
GTCCTTCCCTCGAGAGCAGG+AGG + chr3.3:87178273-87178292 None:intergenic 65.0%
! CCCTTGCAAGCGGGGTATCC+TGG - chr3.3:87180494-87180513 MS.gene014889:intron 65.0%
GGGGTCCTTCCCTCGAGAGC+AGG + chr3.3:87178276-87178295 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 87177469 87181542 87177469 ID=MS.gene014889
chr3.3 mRNA 87177469 87181542 87177469 ID=MS.gene014889.t1;Parent=MS.gene014889
chr3.3 exon 87181431 87181542 87181431 ID=MS.gene014889.t1.exon1;Parent=MS.gene014889.t1
chr3.3 CDS 87181431 87181542 87181431 ID=cds.MS.gene014889.t1;Parent=MS.gene014889.t1
chr3.3 exon 87180222 87180374 87180222 ID=MS.gene014889.t1.exon2;Parent=MS.gene014889.t1
chr3.3 CDS 87180222 87180374 87180222 ID=cds.MS.gene014889.t1;Parent=MS.gene014889.t1
chr3.3 exon 87179688 87180086 87179688 ID=MS.gene014889.t1.exon3;Parent=MS.gene014889.t1
chr3.3 CDS 87179688 87180086 87179688 ID=cds.MS.gene014889.t1;Parent=MS.gene014889.t1
chr3.3 exon 87179335 87179411 87179335 ID=MS.gene014889.t1.exon4;Parent=MS.gene014889.t1
chr3.3 CDS 87179335 87179411 87179335 ID=cds.MS.gene014889.t1;Parent=MS.gene014889.t1
chr3.3 exon 87178125 87179249 87178125 ID=MS.gene014889.t1.exon5;Parent=MS.gene014889.t1
chr3.3 CDS 87178125 87179249 87178125 ID=cds.MS.gene014889.t1;Parent=MS.gene014889.t1
chr3.3 exon 87177469 87177540 87177469 ID=MS.gene014889.t1.exon6;Parent=MS.gene014889.t1
chr3.3 CDS 87177469 87177540 87177469 ID=cds.MS.gene014889.t1;Parent=MS.gene014889.t1
Gene Sequence

>MS.gene014889

ATGGATGATTCCGGTGACCGTTTTCCCATCGGAATGCGTGTTCTCGCCGTTGACGACGATCCAACTTGTCTCATGGTTTTGGAAACTCTTCTCCGTAGATGTCAATACCACGGTCAGATTCGGATCTAGTGTTTTTTATTTTGATTAAAGTTTTCATTTCTATGCTCTATTTATGTGTATAATCAATGTATCATGATAATTCATAAGTCAATGATATGTGTATAGATATGATTAATTTTTTATATTTATTTTTAGTTTATAAGTGTATAATTGCAATTCCAGAAATTCAAATAAAAAAAAACATGTCTTTAGGATCAAATCTAACTGGGAAATGGAGTTAGGTAGAAATTAACGATATTGTGTAGATATTTGGAACTTTTACTAAGAATAAAGGTAAGATGAAAAGAGTCATGATTTAGGGTCAAAGGTTCCAAATTCATAGTGTGTTGACTTATTTTGACTGACTAACTCCCTGTGATAGTATAAAGAAACAATTTTTACAGATTTTATGTGGAGTTTAATCTTATTTCGTCTACGCTTGTAAAAGCAGCGTCTGCATAGATTCTTATATGATAAACACTTATTGAATAATCACTTAATTATGTGCTTGCTTGGGTAATGTATCCAAGCATATTTTTACTAGATATGTGAAGGATATTCCGTAATTAGAGCTTCATTGCTTGTAGAGGTAGTACCGTAGTAGGAAAAGTTGCTCATAGTGCATAATATATTTCATTTTGTTTAGTGGCTTTGGACTGAATATGCACTTTATGGTCAACCATTTTTTGTTTTGGTGTTAATCCTCCTGCTCTCGAGGGAAGGACCCCTCTCAAGGGGAGGCCTCCTAATATTCCGGAGTTTAGTCAGGGAGGTAATTGAACTCGGGTTCCGCCTGTGAATCAAGCTCGGGTTCTCTCGAATGATTCCTCCTAGGGGGGCTCCTTAACCTCTTGATCCCAATCACTTGGTTATAGTCAACCATTTTTCTTTTCTTGTCTTTGCTCTTGTAACTGTTGTTGCTTAGATTTCAGGATCCTGTATTTCTTCATGATTAGTAATTTTCTTTGACAAACATTTCACTGTTGCTTTCTTTATTGGATGTATATTGTAAATATGATGTGAACTTTGCTTATTCAAAGTGATACTTATTTCTGATTGGGGATTGCAGTAACCACAACTAGTCAAGCAATAACAGCGTTGACCATGTTGAGAGAAAACAAAGACAAGTTTGACCTGGTAATCAGTGATGTGCACATGCCTGACATGGATGGATTTAAGCTGCTTGAACTTGTGGGACTTGAAATGGACCTTCCCGTCATAAGTAAGTGGGGATCTGTCATGTAATCCTCAGCTGTTAATTTTTTTCTTCCTTTTCTATTTATTCATTTTGACTCTTGTTTATTGGTACGACTGCTAATCAATGATACTTTTGCTGTTATAAAATGTTTGATTTCAGTGTTGTCTGCATATGGTGATACAAAGCTGGTGATGAAAGGAATTTCCCATGGTGCCTGTGATTATCTGCTGAAACCTGTGAGATTAGAGGAGCTAAAGAACATTTGGCAGCATGTAATTAGGAAGAAGAAGTCTGATCCAAAGGAGAAAAACAAAACCAGTAAACCAGACAAAACTACTTCTGATAGTGGCAGTGGACTAAGATCCGCAGGAGCAGAAAATTCAGATGAAAATGGAAAGCTGACTAAGAAAAGAAAGGATCAGGATGAAGACGAAGATGAGGATAAAGAGAATGGTAATGACAACGAGGACCCATCAGCTCAGAAGAAGCCTCGGGTTGTTTGGTCTGTGGAGCTGCACCGCAAGTTTGTTGCTGCTGTTAATCAGTTAGGCATTGACAGTATGTTCTTCACTCTGCCTGCAACACAAACAATTTTTATATCTTATCAATTTCCTCGAGCTTTACTGAATTTTATTTCAAATTTTACATTATCAAAATGTTTTTGAATATCTGGTTCGATGTTTATTTTAAATCCTAGGTTTAAAATGACTTATGATGATAGATGCCACTTGGGATGAATTTCATTTCTGAATCATCACTCAAATTTAAGCCATGTCATAAAGTATTCCATTACTGAATTTGAGTATTATGTTAATAATGTTGTTTTACTTGCAGAGGCTGTGCCCAAAAAAATTCTTGATATGATGAATGTCGAAAATATCACAAGGGAGAACGTGGCAAGCCATCTCCAGGTATTTTTCTAGTTCTTTACACTTTAATTTATGTAAGTTAACCATTTCTTTCACTGAATGTTTCGGGTTTATGAAATGGCTGCAGAAGTATAGACTTTATCTGAAAAGAATTAGCTGTGTTGCAAACCAACAAGCTAGTATGGTGGCAGCCTTAGGGAGTGCAGATCAATCTTATTTGAGAATGGGTGGTTCTGGACATTTTCACAATAATGCTTTCAGATCCTTTTCACCTAGTGGGATAATTGGTAATCTGAACACTCCAACTAGTCTTAACGGGCATGGATTTTCTCCTTCGGGGCTTCTTCAGTTGGGCCAATCACGTAATTTAAACAATTCTTCCAATGATCAACTTAAATTCCAGTCAGCCATAACTCCCGTTAATCAGAATATTCTTCAGGGAATGCCAATGTCCATAGGGTTTGATCACTTGCAAAACAGCAAGGGTGTTATCTCTGTTCAAAACCTGAATACTGATGTGAAAACAACTTTTCCCATCCCAAATAAATTCCCGGATCAACGGCCAAGTTTTGCCACCTCTAGTTCTCATCCCCCAAGTCTCGGTATCTCAAACAATGGCTTGATGTCGGATACGCACCCTGAAAGAAAACACGGAGGTATAGGAATAGGATATGGAAGTTCATCTTCTTCAGTAGCCTCTCAACATTCAGAATTTTCTTTCTCTATGCTGGATCAAGGTAGGCACGGTGATAATTGGTCAAGCGACGTACCGTTATCTGGAATCCAAACAAATTCTTTCTCTTCAAGTGAATGTTTTAGACAGACAGCTGTTCCTCCTTCAGATAACATGGCTTCTTTGCCCTTGCAAGCGGGGTATCCTGGTGGTTCGTTGCCAGATATGCACTCCCAAGGAATGATTTTTACTAATTCACCTGAGTATATAAACGGTAATTTGCCATTTCAAGGATGGGAAGACCGTAATCAGGATGCTACTTACCACTCAAATGTTACTTGTGGATCAATGAACTCTCTTGCTCCAGTTAACGGTGCCGTTTTTCCACCAGGCCAGACAACAACTAGCTCCACCTTGGATACTAAATTTTTTAATCCCATACAAATGAAGCATGCTGGATTTGCCGAGTTAACTGAATGCAGCTCATCAAGACAATCTCCAGCTAATATCATAAGCCAGCAGAAGTTTTCTAATAATCTTGGTTCACTGGAATACTTGGCGAGTTCAATGATGGGACAGGTAATAACATTTTTTGAATATAATGTTGGTTTTCCCATAAATGCTTCTGTATGGCTTCTTTAACATGTATAGTTTTTTTTGCATATGGTTGATACTTGATACCATCTCAAACATTATTTCCTTGACCACACATACTGATTAGATTATAAAAGTACAATCAGTAGCTTTAGAAAGACATACTCCAGTCAGCATGGTTATATTTGTCTTATTCCCGAGAGAAGACTTAAAATCATTACATTGTCAGCATTGAAATTTGAAGATTTAAATTGGTGGAACTCTGTATTGTTGAAACTTTACGAGCCATATATTTCATTGATGTTCTTTGTGATGGATCTGCTAGCCAATTAACCACCGTAACTTTCGATGTCCTTTAGAACATTCACATAGGATGAAAACATTTGTTTTTCTATCCTGGATTGGTACAATAACTTGTCCGTTGAGTATATAGCATGTTGTTTTATTTAACTTAGGTTTAGCATCTTTAAAGTATGCAATGCTCGTTTGGTTGCTGTATCTTGTTTCTTGCCCCTTGTCCTAAATATTTTGCTTCCATAGTAATTTGATACCATGTTCATGACATGCAGGAGCAAGATAAGATGAAATTATTGGGTGGAGACTTCATATGCGATAATTACTCCGACGGGGTATCTTTGTGA
Protein sequence

>MS.gene014889.t1

MDDSGDRFPIGMRVLAVDDDPTCLMVLETLLRRCQYHVTTTSQAITALTMLRENKDKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSAYGDTKLVMKGISHGACDYLLKPVRLEELKNIWQHVIRKKKSDPKEKNKTSKPDKTTSDSGSGLRSAGAENSDENGKLTKKRKDQDEDEDEDKENGNDNEDPSAQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDMMNVENITRENVASHLQKYRLYLKRISCVANQQASMVAALGSADQSYLRMGGSGHFHNNAFRSFSPSGIIGNLNTPTSLNGHGFSPSGLLQLGQSRNLNNSSNDQLKFQSAITPVNQNILQGMPMSIGFDHLQNSKGVISVQNLNTDVKTTFPIPNKFPDQRPSFATSSSHPPSLGISNNGLMSDTHPERKHGGIGIGYGSSSSSVASQHSEFSFSMLDQGRHGDNWSSDVPLSGIQTNSFSSSECFRQTAVPPSDNMASLPLQAGYPGGSLPDMHSQGMIFTNSPEYINGNLPFQGWEDRNQDATYHSNVTCGSMNSLAPVNGAVFPPGQTTTSSTLDTKFFNPIQMKHAGFAELTECSSSRQSPANIISQQKFSNNLGSLEYLASSMMGQEQDKMKLLGGDFICDNYSDGVSL