Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene014989.t1 | XP_024632961.1 | 83.8 | 794 | 100 | 5 | 1 | 765 | 1 | 794 | 0.00E+00 | 1324.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene014989.t1 | Q9SZL8 | 26.6 | 636 | 396 | 12 | 32 | 664 | 70 | 637 | 1.7e-60 | 235.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene014989.t1 | D3YBB9 | 76.0 | 774 | 165 | 5 | 1 | 763 | 49 | 812 | 0.0e+00 | 1176.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene014989.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene014989.t1 | MTR_0558s0020 | 86.149 | 296 | 39 | 2 | 1 | 294 | 1 | 296 | 0.0 | 535 |
MS.gene014989.t1 | MTR_1g083640 | 81.690 | 284 | 35 | 2 | 1 | 267 | 1 | 284 | 9.97e-167 | 483 |
MS.gene014989.t1 | MTR_8g446020 | 72.542 | 295 | 41 | 2 | 1 | 294 | 1 | 256 | 5.56e-147 | 431 |
MS.gene014989.t1 | MTR_6g090505 | 82.278 | 237 | 42 | 0 | 64 | 300 | 1 | 237 | 2.25e-139 | 416 |
MS.gene014989.t1 | MTR_6g090505 | 65.686 | 102 | 8 | 2 | 395 | 494 | 230 | 306 | 6.28e-33 | 131 |
MS.gene014989.t1 | MTR_6g090505 | 77.551 | 49 | 11 | 0 | 566 | 614 | 314 | 362 | 8.97e-12 | 68.2 |
MS.gene014989.t1 | MTR_2g014100 | 80.408 | 245 | 38 | 2 | 1 | 235 | 1 | 245 | 6.58e-136 | 402 |
MS.gene014989.t1 | MTR_0337s0040 | 70.769 | 260 | 35 | 3 | 1 | 258 | 1 | 221 | 1.71e-118 | 357 |
MS.gene014989.t1 | MTR_3g008240 | 82.266 | 203 | 34 | 2 | 1 | 201 | 1 | 203 | 3.23e-112 | 340 |
MS.gene014989.t1 | MTR_4g040430 | 81.683 | 202 | 32 | 2 | 1 | 201 | 1 | 198 | 8.61e-112 | 338 |
MS.gene014989.t1 | MTR_0337s0060 | 58.861 | 316 | 30 | 4 | 446 | 758 | 21 | 239 | 3.63e-109 | 333 |
MS.gene014989.t1 | MTR_5g071590 | 71.667 | 180 | 37 | 3 | 1 | 166 | 1 | 180 | 1.08e-84 | 267 |
MS.gene014989.t1 | MTR_1g055240 | 85.915 | 142 | 20 | 0 | 90 | 231 | 3 | 144 | 4.56e-84 | 264 |
MS.gene014989.t1 | MTR_0019s0290 | 80.263 | 152 | 30 | 0 | 81 | 232 | 9 | 160 | 2.08e-83 | 263 |
MS.gene014989.t1 | MTR_3g028680 | 79.605 | 152 | 28 | 1 | 617 | 765 | 1 | 152 | 1.32e-79 | 254 |
MS.gene014989.t1 | MTR_2g067090 | 77.852 | 149 | 30 | 1 | 620 | 765 | 99 | 247 | 1.51e-71 | 236 |
MS.gene014989.t1 | MTR_4g133495 | 64.088 | 181 | 39 | 2 | 575 | 752 | 88 | 245 | 1.96e-68 | 227 |
MS.gene014989.t1 | MTR_4g133340 | 64.088 | 181 | 39 | 2 | 575 | 752 | 88 | 245 | 1.96e-68 | 227 |
MS.gene014989.t1 | MTR_1281s0010 | 79.817 | 109 | 21 | 1 | 19 | 126 | 1 | 109 | 5.67e-54 | 182 |
MS.gene014989.t1 | MTR_6g051425 | 32.246 | 276 | 172 | 4 | 48 | 323 | 31 | 291 | 4.86e-36 | 139 |
MS.gene014989.t1 | MTR_4g008820 | 82.500 | 80 | 12 | 2 | 1 | 78 | 125 | 204 | 2.19e-29 | 125 |
MS.gene014989.t1 | MTR_8g046060 | 76.136 | 88 | 11 | 3 | 1 | 78 | 91 | 178 | 6.41e-29 | 115 |
MS.gene014989.t1 | MTR_2g067130 | 60.000 | 75 | 24 | 2 | 694 | 765 | 46 | 117 | 6.71e-18 | 82.0 |
MS.gene014989.t1 | MTR_1g070355 | 27.347 | 245 | 155 | 6 | 48 | 290 | 88 | 311 | 3.30e-17 | 86.3 |
MS.gene014989.t1 | MTR_0337s0050 | 75.000 | 36 | 9 | 0 | 258 | 293 | 14 | 49 | 1.76e-13 | 66.6 |
MS.gene014989.t1 | MTR_0402s0040 | 24.865 | 185 | 120 | 4 | 48 | 232 | 40 | 205 | 3.09e-13 | 73.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene014989.t1 | AT4G38180 | 27.640 | 644 | 379 | 16 | 32 | 664 | 70 | 637 | 5.42e-67 | 238 |
MS.gene014989.t1 | AT4G15090 | 24.549 | 721 | 450 | 16 | 49 | 752 | 66 | 709 | 4.71e-58 | 213 |
MS.gene014989.t1 | AT4G15090 | 24.549 | 721 | 450 | 16 | 49 | 752 | 66 | 709 | 4.71e-58 | 213 |
MS.gene014989.t1 | AT4G15090 | 24.549 | 721 | 450 | 16 | 49 | 752 | 66 | 709 | 4.71e-58 | 213 |
MS.gene014989.t1 | AT4G15090 | 24.549 | 721 | 450 | 16 | 49 | 752 | 66 | 709 | 4.71e-58 | 213 |
MS.gene014989.t1 | AT4G15090 | 24.549 | 721 | 450 | 16 | 49 | 752 | 66 | 709 | 4.71e-58 | 213 |
MS.gene014989.t1 | AT2G27110 | 27.112 | 509 | 314 | 11 | 212 | 718 | 36 | 489 | 3.77e-52 | 194 |
MS.gene014989.t1 | AT2G27110 | 27.112 | 509 | 314 | 11 | 212 | 718 | 181 | 634 | 1.14e-51 | 194 |
MS.gene014989.t1 | AT2G27110 | 27.112 | 509 | 314 | 11 | 212 | 718 | 181 | 634 | 1.14e-51 | 194 |
MS.gene014989.t1 | AT3G06250 | 24.797 | 617 | 341 | 15 | 49 | 660 | 205 | 703 | 2.38e-49 | 186 |
MS.gene014989.t1 | AT3G06250 | 24.797 | 617 | 341 | 15 | 49 | 660 | 205 | 703 | 2.38e-49 | 186 |
MS.gene014989.t1 | AT3G06250 | 24.797 | 617 | 341 | 15 | 49 | 660 | 205 | 703 | 2.38e-49 | 186 |
MS.gene014989.t1 | AT1G76320 | 24.520 | 677 | 415 | 19 | 49 | 719 | 12 | 598 | 5.72e-49 | 184 |
MS.gene014989.t1 | AT1G76320 | 24.556 | 676 | 414 | 19 | 49 | 718 | 12 | 597 | 2.50e-48 | 183 |
MS.gene014989.t1 | AT1G76320 | 24.556 | 676 | 414 | 19 | 49 | 718 | 12 | 597 | 2.97e-48 | 183 |
MS.gene014989.t1 | AT1G76320 | 24.556 | 676 | 414 | 19 | 49 | 718 | 12 | 597 | 2.97e-48 | 183 |
MS.gene014989.t1 | AT3G22170 | 23.031 | 673 | 406 | 18 | 49 | 707 | 85 | 659 | 3.57e-46 | 178 |
MS.gene014989.t1 | AT3G22170 | 23.031 | 673 | 406 | 18 | 49 | 707 | 85 | 659 | 3.57e-46 | 178 |
MS.gene014989.t1 | AT4G38170 | 25.058 | 431 | 265 | 11 | 234 | 661 | 24 | 399 | 3.60e-43 | 165 |
MS.gene014989.t1 | AT5G18960 | 24.575 | 647 | 359 | 20 | 24 | 660 | 200 | 727 | 1.19e-42 | 167 |
MS.gene014989.t1 | AT5G18960 | 24.575 | 647 | 359 | 20 | 24 | 660 | 200 | 727 | 1.19e-42 | 167 |
MS.gene014989.t1 | AT1G10240 | 24.398 | 623 | 379 | 19 | 48 | 658 | 62 | 604 | 6.01e-40 | 157 |
MS.gene014989.t1 | AT1G10240 | 24.398 | 623 | 379 | 19 | 48 | 658 | 62 | 604 | 6.01e-40 | 157 |
MS.gene014989.t1 | AT5G28530 | 22.930 | 628 | 391 | 15 | 48 | 659 | 69 | 619 | 2.39e-38 | 152 |
MS.gene014989.t1 | AT2G32250 | 24.034 | 699 | 397 | 19 | 49 | 742 | 53 | 622 | 3.28e-38 | 153 |
MS.gene014989.t1 | AT2G32250 | 24.034 | 699 | 397 | 19 | 49 | 742 | 12 | 581 | 4.19e-38 | 152 |
MS.gene014989.t1 | AT2G32250 | 24.177 | 699 | 396 | 20 | 49 | 742 | 12 | 581 | 4.50e-38 | 152 |
MS.gene014989.t1 | AT2G32250 | 24.034 | 699 | 397 | 19 | 49 | 742 | 53 | 622 | 4.63e-38 | 152 |
MS.gene014989.t1 | AT2G32250 | 24.034 | 699 | 397 | 19 | 49 | 742 | 53 | 622 | 4.63e-38 | 152 |
MS.gene014989.t1 | AT2G32250 | 24.034 | 699 | 397 | 19 | 49 | 742 | 53 | 622 | 4.75e-38 | 152 |
MS.gene014989.t1 | AT2G32250 | 24.034 | 699 | 397 | 19 | 49 | 742 | 53 | 622 | 4.75e-38 | 152 |
MS.gene014989.t1 | AT2G32250 | 24.034 | 699 | 397 | 19 | 49 | 742 | 53 | 622 | 4.75e-38 | 152 |
MS.gene014989.t1 | AT5G28530 | 22.771 | 628 | 388 | 16 | 48 | 659 | 69 | 615 | 1.27e-37 | 150 |
MS.gene014989.t1 | AT5G28530 | 22.771 | 628 | 388 | 16 | 48 | 659 | 69 | 615 | 1.27e-37 | 150 |
MS.gene014989.t1 | AT1G80010 | 23.913 | 644 | 367 | 23 | 49 | 661 | 110 | 661 | 5.49e-35 | 142 |
MS.gene014989.t1 | AT1G52520 | 21.718 | 617 | 403 | 16 | 48 | 661 | 99 | 638 | 1.12e-31 | 132 |
MS.gene014989.t1 | AT4G19990 | 27.985 | 268 | 186 | 4 | 218 | 482 | 163 | 426 | 3.73e-26 | 115 |
MS.gene014989.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 590 | 720 | 495 | 615 | 8.42e-13 | 72.8 |
MS.gene014989.t1 | AT4G19990 | 27.985 | 268 | 186 | 4 | 218 | 482 | 177 | 440 | 3.93e-26 | 115 |
MS.gene014989.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 590 | 720 | 509 | 629 | 8.60e-13 | 72.8 |
MS.gene014989.t1 | AT4G19990 | 27.985 | 268 | 186 | 4 | 218 | 482 | 163 | 426 | 4.04e-26 | 115 |
MS.gene014989.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 590 | 720 | 495 | 615 | 7.80e-13 | 72.8 |
MS.gene014989.t1 | AT4G19990 | 27.985 | 268 | 186 | 4 | 218 | 482 | 163 | 426 | 4.04e-26 | 115 |
MS.gene014989.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 590 | 720 | 495 | 615 | 7.80e-13 | 72.8 |
MS.gene014989.t1 | AT4G19990 | 27.985 | 268 | 186 | 4 | 218 | 482 | 106 | 369 | 4.14e-26 | 115 |
MS.gene014989.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 590 | 720 | 438 | 558 | 7.84e-13 | 72.8 |
MS.gene014989.t1 | AT4G19990 | 27.985 | 268 | 186 | 4 | 218 | 482 | 163 | 426 | 5.86e-26 | 114 |
MS.gene014989.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 590 | 720 | 495 | 615 | 7.48e-13 | 72.8 |
MS.gene014989.t1 | AT4G19990 | 27.985 | 268 | 186 | 4 | 218 | 482 | 163 | 426 | 5.86e-26 | 114 |
MS.gene014989.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 590 | 720 | 495 | 615 | 7.48e-13 | 72.8 |
Find 114 sgRNAs with CRISPR-Local
Find 172 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCATGCTGAGTTGGACTTTA+AGG | 0.133287 | 3.2:-86561657 | MS.gene014989:CDS |
TTTCAATGAGTTAACTAATT+TGG | 0.156761 | 3.2:-86561966 | MS.gene014989:CDS |
AGTCGCTTCTTTGACCTAAT+TGG | 0.186128 | 3.2:+86560831 | None:intergenic |
CTTTAGTCATTTCAACATTA+TGG | 0.194287 | 3.2:-86561699 | MS.gene014989:CDS |
CAACAAGATTATGCTCTATT+TGG | 0.198611 | 3.2:-86562751 | MS.gene014989:CDS |
TTCATTTCAGCTGCCTTTCT+TGG | 0.201003 | 3.2:-86562247 | MS.gene014989:intron |
ACATTATGGTTCAGAGAATA+AGG | 0.214761 | 3.2:-86561685 | MS.gene014989:CDS |
TATGGCTTGAGGTTTCTTAT+TGG | 0.276008 | 3.2:+86562120 | None:intergenic |
CATCGTAAGAGTGTGTTATT+TGG | 0.276792 | 3.2:-86562214 | MS.gene014989:CDS |
TTCTTTGACCTAATTGGATT+TGG | 0.299426 | 3.2:+86560837 | None:intergenic |
TGTTCTTGAGGCAGGGAAAA+AGG | 0.322946 | 3.2:-86560985 | MS.gene014989:CDS |
GCCGATATTTATTGTTTGTT+CGG | 0.341758 | 3.2:+86562701 | None:intergenic |
ACTAGCCTGGTCTGTGTATA+TGG | 0.347339 | 3.2:+86562102 | None:intergenic |
AATCAGATCTCGACTACAAT+TGG | 0.347642 | 3.2:-86561925 | MS.gene014989:CDS |
GGTTTCGAATGTTGATGTTT+TGG | 0.354913 | 3.2:-86561402 | MS.gene014989:CDS |
TATGCATTGGTCTTCAGTTT+GGG | 0.370760 | 3.2:-86561825 | MS.gene014989:CDS |
CTCAACGGTGTTCTTGAGGC+AGG | 0.386173 | 3.2:-86560993 | MS.gene014989:CDS |
AACAATAAATATCGGCCATT+AGG | 0.388497 | 3.2:-86562694 | MS.gene014989:intron |
ACCGAACAAACAATAAATAT+CGG | 0.389395 | 3.2:-86562702 | MS.gene014989:CDS |
GTATGCATTGGTCTTCAGTT+TGG | 0.392120 | 3.2:-86561826 | MS.gene014989:CDS |
TTTGGTCTTTCTTTGAACTT+TGG | 0.395048 | 3.2:+86560855 | None:intergenic |
GTCTTTAGTGCCAACATTCA+TGG | 0.395146 | 3.2:+86561109 | None:intergenic |
TTCTCATACTCAACAAGAAC+TGG | 0.395633 | 3.2:+86563231 | None:intergenic |
AAGAAAGACCAAATCCAATT+AGG | 0.397771 | 3.2:-86560845 | MS.gene014989:intron |
TTCCTTCAAATACTATTATG+AGG | 0.399583 | 3.2:-86561525 | MS.gene014989:CDS |
GAGGAGTTTCTTATTTCTAA+AGG | 0.403538 | 3.2:-86560960 | MS.gene014989:CDS |
TAAAGAATCATGGAAGTCTT+TGG | 0.408500 | 3.2:-86563457 | MS.gene014989:CDS |
CATGTCGTATGTTTGAGAAC+CGG | 0.411671 | 3.2:-86561277 | MS.gene014989:CDS |
GATTATGATCTTCAAACCTT+GGG | 0.413114 | 3.2:+86561354 | None:intergenic |
CGAGAAGTAAATAAAGTTCA+AGG | 0.413853 | 3.2:-86563054 | MS.gene014989:CDS |
ATAACACTGGATTCTCTGTT+AGG | 0.417808 | 3.2:-86563389 | MS.gene014989:CDS |
GGGTTGTCACAGTCGACATT+AGG | 0.419786 | 3.2:-86561319 | MS.gene014989:CDS |
CGATTATGATCTTCAAACCT+TGG | 0.425681 | 3.2:+86561353 | None:intergenic |
AGCTGGAATATATTTGAAGT+TGG | 0.433136 | 3.2:-86563172 | MS.gene014989:CDS |
GAAAGGGTTGGTTGTAAAGC+TGG | 0.447509 | 3.2:-86563189 | MS.gene014989:CDS |
CGCTTTAAAACATATTGTGC+AGG | 0.447633 | 3.2:+86561176 | None:intergenic |
CGTTATGCTTGTAACAAAGA+AGG | 0.449439 | 3.2:-86563306 | MS.gene014989:CDS |
GCTTTAATAAATTCTAAAGC+TGG | 0.450264 | 3.2:-86563024 | MS.gene014989:CDS |
ATCTGAGAGTGGACAATTGA+CGG | 0.452529 | 3.2:-86563532 | MS.gene014989:CDS |
TGGTCTTTGCTCATGGCACA+TGG | 0.452802 | 3.2:-86562035 | MS.gene014989:CDS |
GGCCTACTTCGGACTTTAAG+TGG | 0.458978 | 3.2:-86561871 | MS.gene014989:CDS |
ATGTCGTATGTTTGAGAACC+GGG | 0.461344 | 3.2:-86561276 | MS.gene014989:CDS |
ACAAAATAAGAAATCGGATA+AGG | 0.469178 | 3.2:-86563340 | MS.gene014989:CDS |
GAAGTGATGGGTCAAGGAGT+TGG | 0.484292 | 3.2:-86562979 | MS.gene014989:CDS |
CTCCTCATAATAGTATTTGA+AGG | 0.485089 | 3.2:+86561523 | None:intergenic |
TTACAACCAACCCTTTCCTC+TGG | 0.485330 | 3.2:+86563195 | None:intergenic |
TTTAATTATGCATATAACAC+TGG | 0.485542 | 3.2:-86563402 | MS.gene014989:CDS |
TCTAATGACAACTCGTCAAA+AGG | 0.488137 | 3.2:-86562911 | MS.gene014989:CDS |
CTCAAGTAGCACAAATGCTC+TGG | 0.489977 | 3.2:+86563084 | None:intergenic |
CAATTCACAAAATAAGAAAT+CGG | 0.490263 | 3.2:-86563346 | MS.gene014989:CDS |
TATGAGGAGGACACAACAAA+AGG | 0.490908 | 3.2:-86561509 | MS.gene014989:CDS |
ATGATTGTCAAAACCAAGAA+AGG | 0.491378 | 3.2:+86562234 | None:intergenic |
CTGTCTATGAACCATCTGTT+GGG | 0.491412 | 3.2:-86560884 | MS.gene014989:CDS |
CGTCAAAAGGAGATGGTGGC+TGG | 0.492100 | 3.2:-86562898 | MS.gene014989:CDS |
GACCGCATAAGCTGACTGTT+GGG | 0.496307 | 3.2:+86561605 | None:intergenic |
GAGAACATCTTATGAAGTGA+TGG | 0.499875 | 3.2:-86562992 | MS.gene014989:CDS |
TGTCTTCTGCAGCATCAACT+TGG | 0.502977 | 3.2:+86562806 | None:intergenic |
CTCATTCAAATCGTATGCAT+TGG | 0.507227 | 3.2:-86561838 | MS.gene014989:CDS |
ATCATAATCGACTTGATGAA+AGG | 0.507955 | 3.2:-86561340 | MS.gene014989:CDS |
TTTAAGTCCGAAAATCGAAA+AGG | 0.508080 | 3.2:+86562940 | None:intergenic |
AAGGGATAATCATGCTGAGT+TGG | 0.508852 | 3.2:-86561666 | MS.gene014989:CDS |
ATTGGTCTTCAGTTTGGGTG+AGG | 0.509410 | 3.2:-86561820 | MS.gene014989:CDS |
ATCAGATCTCGACTACAATT+GGG | 0.514063 | 3.2:-86561924 | MS.gene014989:CDS |
TGTCTATAAGATATATAAGT+GGG | 0.514682 | 3.2:-86563136 | MS.gene014989:CDS |
GATCTTCAAACCTTGGGGAA+AGG | 0.519004 | 3.2:+86561360 | None:intergenic |
TAAAGAATCGAACAAGTGAA+TGG | 0.519618 | 3.2:+86561717 | None:intergenic |
CATTATGGTTCAGAGAATAA+GGG | 0.522134 | 3.2:-86561684 | MS.gene014989:CDS |
TCATAATCGACTTGATGAAA+GGG | 0.526860 | 3.2:-86561339 | MS.gene014989:CDS |
CATAATAGTATTTGAAGGAA+AGG | 0.529686 | 3.2:+86561528 | None:intergenic |
ACTTCAACAACGCACTAGCC+TGG | 0.534735 | 3.2:+86562089 | None:intergenic |
TAACAAAGAAGGTTTCAAGA+AGG | 0.538422 | 3.2:-86563295 | MS.gene014989:CDS |
AATCGAACAAGTGAATGGTC+TGG | 0.540971 | 3.2:+86561722 | None:intergenic |
ATGAGGAGGACACAACAAAA+GGG | 0.542065 | 3.2:-86561508 | MS.gene014989:CDS |
AACAAAGAAGGTTTCAAGAA+GGG | 0.545537 | 3.2:-86563294 | MS.gene014989:CDS |
CATTTAGTGATAAAGAATCA+TGG | 0.546005 | 3.2:-86563467 | MS.gene014989:CDS |
TGGTCTGTGTATATGGCTTG+AGG | 0.556772 | 3.2:+86562109 | None:intergenic |
CTGAAATCCACCATGAATGT+TGG | 0.557140 | 3.2:-86561119 | MS.gene014989:CDS |
AATGAAGCTCTCTCGAAACC+AGG | 0.565261 | 3.2:-86562844 | MS.gene014989:CDS |
TGAAAATTCAGTTATTGATG+CGG | 0.565546 | 3.2:-86563508 | MS.gene014989:CDS |
GCTGTCTATGAACCATCTGT+TGG | 0.568181 | 3.2:-86560885 | MS.gene014989:CDS |
GTGATGGGTCAAGGAGTTGG+AGG | 0.568802 | 3.2:-86562976 | MS.gene014989:CDS |
TACACGTGTTTGCGCAGATG+CGG | 0.571672 | 3.2:-86561033 | MS.gene014989:CDS |
ATGTCTATAAGATATATAAG+TGG | 0.572287 | 3.2:-86563137 | MS.gene014989:CDS |
GGACCGCATAAGCTGACTGT+TGG | 0.579264 | 3.2:+86561604 | None:intergenic |
TGGTGTATACTTGTTTACTA+CGG | 0.585960 | 3.2:+86561583 | None:intergenic |
ATATTAACTTCATCTGAGAG+TGG | 0.588105 | 3.2:-86563543 | MS.gene014989:CDS |
TCTTATGAAGTGATGGGTCA+AGG | 0.589029 | 3.2:-86562985 | MS.gene014989:CDS |
TCAACGGTGTTCTTGAGGCA+GGG | 0.590097 | 3.2:-86560992 | MS.gene014989:CDS |
ATTTCTCAACGGTGTTCTTG+AGG | 0.591378 | 3.2:-86560997 | MS.gene014989:CDS |
ATAAGTTAGGAAAGATGATG+AGG | 0.591839 | 3.2:-86560691 | MS.gene014989:intron |
TTGAAGAAAACCTTTCCCCA+AGG | 0.594796 | 3.2:-86561370 | MS.gene014989:CDS |
TGAAGACTTAGAAGGCGTAA+CGG | 0.598405 | 3.2:+86560917 | None:intergenic |
GACAACTCGTCAAAAGGAGA+TGG | 0.599038 | 3.2:-86562905 | MS.gene014989:CDS |
TTGATATCGTTGTGCTTGAG+TGG | 0.601464 | 3.2:+86561085 | None:intergenic |
AGAACATCTTATGAAGTGAT+GGG | 0.601988 | 3.2:-86562991 | MS.gene014989:CDS |
AACTCGTCAAAAGGAGATGG+TGG | 0.603142 | 3.2:-86562902 | MS.gene014989:CDS |
TTTGGTGTAGTCCCAACAGA+TGG | 0.603444 | 3.2:+86560873 | None:intergenic |
ACGTGTTTGCGCAGATGCGG+AGG | 0.605934 | 3.2:-86561030 | MS.gene014989:CDS |
ATCCCAACAGTCAGCTTATG+CGG | 0.606153 | 3.2:-86561607 | MS.gene014989:CDS |
CTTCAAATACTATTATGAGG+AGG | 0.607664 | 3.2:-86561522 | MS.gene014989:CDS |
AGAACTGGACTGTCACATGT+TGG | 0.620791 | 3.2:+86563246 | None:intergenic |
AGCCACTTAAAGTCCGAAGT+AGG | 0.621799 | 3.2:+86561869 | None:intergenic |
GGGTCAAGGAGTTGGAGGCA+CGG | 0.621882 | 3.2:-86562971 | MS.gene014989:CDS |
ATTATGATCTTCAAACCTTG+GGG | 0.630358 | 3.2:+86561355 | None:intergenic |
GGTCTTTGCTCATGGCACAT+GGG | 0.639768 | 3.2:-86562034 | MS.gene014989:CDS |
TTTAGTGCCAACATTCATGG+TGG | 0.641441 | 3.2:+86561112 | None:intergenic |
GATTTCAGCTTATCGACAGA+CGG | 0.644926 | 3.2:+86561134 | None:intergenic |
TGAATAAATGAAAAGCAAGA+TGG | 0.655697 | 3.2:+86561563 | None:intergenic |
GCATCTGAAATATTTCTCAA+CGG | 0.661104 | 3.2:-86561008 | MS.gene014989:CDS |
CATGTCGACATAAGAAACCC+CGG | 0.663279 | 3.2:+86561258 | None:intergenic |
TCAAGCCATATACACAGACC+AGG | 0.664578 | 3.2:-86562107 | MS.gene014989:CDS |
TGTCGTATGTTTGAGAACCG+GGG | 0.673760 | 3.2:-86561275 | MS.gene014989:CDS |
ATGTTGATAATGATAATGAG+AGG | 0.683310 | 3.2:-86561424 | MS.gene014989:CDS |
TGTTGATAATGATAATGAGA+GGG | 0.689129 | 3.2:-86561423 | MS.gene014989:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTTTATGTTATAAGTT+AGG | - | chr3.2:86563468-86563487 | MS.gene014989:CDS | 10.0% |
!! | ATGTCTATAAGATATATAAG+TGG | - | chr3.2:86561035-86561054 | MS.gene014989:CDS | 20.0% |
!! | CAATTCACAAAATAAGAAAT+CGG | - | chr3.2:86560826-86560845 | MS.gene014989:intron | 20.0% |
!! | TGTCTATAAGATATATAAGT+GGG | - | chr3.2:86561036-86561055 | MS.gene014989:CDS | 20.0% |
!! | TTTAATTATGCATATAACAC+TGG | - | chr3.2:86560770-86560789 | MS.gene014989:intron | 20.0% |
!! | TTTCAATGAGTTAACTAATT+TGG | - | chr3.2:86562206-86562225 | MS.gene014989:CDS | 20.0% |
!!! | AATTTAATGTTCTGGTTTAT+GGG | - | chr3.2:86561653-86561672 | MS.gene014989:CDS | 20.0% |
!!! | ATGATGAAAAACTGTTTTAA+TGG | - | chr3.2:86562276-86562295 | MS.gene014989:intron | 20.0% |
!!! | TGAATGTTTATATTGATTGA+AGG | - | chr3.2:86561625-86561644 | MS.gene014989:CDS | 20.0% |
! | AAAACACCTTGAAAAACATT+CGG | + | chr3.2:86562114-86562133 | None:intergenic | 25.0% |
! | ACAAAATAAGAAATCGGATA+AGG | - | chr3.2:86560832-86560851 | MS.gene014989:intron | 25.0% |
! | ACCGAACAAACAATAAATAT+CGG | - | chr3.2:86561470-86561489 | MS.gene014989:CDS | 25.0% |
! | AGTACAAAATACTAACCTAA+TGG | + | chr3.2:86561496-86561515 | None:intergenic | 25.0% |
! | CATAATAGTATTTGAAGGAA+AGG | + | chr3.2:86562647-86562666 | None:intergenic | 25.0% |
! | CATTTAGTGATAAAGAATCA+TGG | - | chr3.2:86560705-86560724 | MS.gene014989:intron | 25.0% |
! | CTTTAGTCATTTCAACATTA+TGG | - | chr3.2:86562473-86562492 | MS.gene014989:intron | 25.0% |
! | TGAAAATTCAGTTATTGATG+CGG | - | chr3.2:86560664-86560683 | MS.gene014989:CDS | 25.0% |
! | TGAAATTTGAATGAATGTTC+TGG | - | chr3.2:86561543-86561562 | MS.gene014989:CDS | 25.0% |
! | TGAATAAATGAAAAGCAAGA+TGG | + | chr3.2:86562612-86562631 | None:intergenic | 25.0% |
! | TTCCTTCAAATACTATTATG+AGG | - | chr3.2:86562647-86562666 | MS.gene014989:intron | 25.0% |
!! | AGGTTTAGAATTTAATGTTC+TGG | - | chr3.2:86561645-86561664 | MS.gene014989:CDS | 25.0% |
!! | TGTTGTATTTTGTTCTGATT+TGG | - | chr3.2:86561902-86561921 | MS.gene014989:CDS | 25.0% |
!!! | ATGTTGATAATGATAATGAG+AGG | - | chr3.2:86562748-86562767 | MS.gene014989:CDS | 25.0% |
!!! | CTTATTTTGTGAATTGTTCT+TGG | + | chr3.2:86560822-86560841 | None:intergenic | 25.0% |
!!! | GAATTTAATGTTCTGGTTTA+TGG | - | chr3.2:86561652-86561671 | MS.gene014989:CDS | 25.0% |
!!! | GCTTTAATAAATTCTAAAGC+TGG | - | chr3.2:86561148-86561167 | MS.gene014989:CDS | 25.0% |
!!! | TGAAAAACTGTTTTAATGGA+AGG | - | chr3.2:86562280-86562299 | MS.gene014989:intron | 25.0% |
!!! | TGTTGATAATGATAATGAGA+GGG | - | chr3.2:86562749-86562768 | MS.gene014989:CDS | 25.0% |
AAACACATATGATCTTTCCA+TGG | + | chr3.2:86561716-86561735 | None:intergenic | 30.0% | |
AACAAAGAAGGTTTCAAGAA+GGG | - | chr3.2:86560878-86560897 | MS.gene014989:CDS | 30.0% | |
AACAATAAATATCGGCCATT+AGG | - | chr3.2:86561478-86561497 | MS.gene014989:CDS | 30.0% | |
AAGAAAGACCAAATCCAATT+AGG | - | chr3.2:86563327-86563346 | MS.gene014989:CDS | 30.0% | |
ACATTATGGTTCAGAGAATA+AGG | - | chr3.2:86562487-86562506 | MS.gene014989:intron | 30.0% | |
AGAACATCTTATGAAGTGAT+GGG | - | chr3.2:86561181-86561200 | MS.gene014989:CDS | 30.0% | |
ATAAGTTAGGAAAGATGATG+AGG | - | chr3.2:86563481-86563500 | MS.gene014989:CDS | 30.0% | |
ATATTAACTTCATCTGAGAG+TGG | - | chr3.2:86560629-86560648 | MS.gene014989:CDS | 30.0% | |
ATGATTGTCAAAACCAAGAA+AGG | + | chr3.2:86561941-86561960 | None:intergenic | 30.0% | |
ATTATGATCTTCAAACCTTG+GGG | + | chr3.2:86562820-86562839 | None:intergenic | 30.0% | |
CAACAAGATTATGCTCTATT+TGG | - | chr3.2:86561421-86561440 | MS.gene014989:CDS | 30.0% | |
CATTATGGTTCAGAGAATAA+GGG | - | chr3.2:86562488-86562507 | MS.gene014989:intron | 30.0% | |
CGAGAAGTAAATAAAGTTCA+AGG | - | chr3.2:86561118-86561137 | MS.gene014989:CDS | 30.0% | |
CTCCTCATAATAGTATTTGA+AGG | + | chr3.2:86562652-86562671 | None:intergenic | 30.0% | |
CTGGTATATGTGTGTTAATT+TGG | - | chr3.2:86561582-86561601 | MS.gene014989:CDS | 30.0% | |
CTTCAAATACTATTATGAGG+AGG | - | chr3.2:86562650-86562669 | MS.gene014989:intron | 30.0% | |
GAGAATGCAAAGAAAAATCT+CGG | - | chr3.2:86562162-86562181 | MS.gene014989:CDS | 30.0% | |
GATTATGATCTTCAAACCTT+GGG | + | chr3.2:86562821-86562840 | None:intergenic | 30.0% | |
GCCGATATTTATTGTTTGTT+CGG | + | chr3.2:86561474-86561493 | None:intergenic | 30.0% | |
TAAAGAAAAACCAGAGGAAA+GGG | - | chr3.2:86560967-86560986 | MS.gene014989:CDS | 30.0% | |
TAAAGAATCATGGAAGTCTT+TGG | - | chr3.2:86560715-86560734 | MS.gene014989:intron | 30.0% | |
TAAAGAATCGAACAAGTGAA+TGG | + | chr3.2:86562458-86562477 | None:intergenic | 30.0% | |
TAACAAAGAAGGTTTCAAGA+AGG | - | chr3.2:86560877-86560896 | MS.gene014989:CDS | 30.0% | |
TGGATATCATAGTAAAAACC+TGG | + | chr3.2:86561349-86561368 | None:intergenic | 30.0% | |
TGGTGTATACTTGTTTACTA+CGG | + | chr3.2:86562592-86562611 | None:intergenic | 30.0% | |
TTCTTTGACCTAATTGGATT+TGG | + | chr3.2:86563338-86563357 | None:intergenic | 30.0% | |
TTTAAGTCCGAAAATCGAAA+AGG | + | chr3.2:86561235-86561254 | None:intergenic | 30.0% | |
TTTCTATTTACACAGCACAA+TGG | - | chr3.2:86561861-86561880 | MS.gene014989:CDS | 30.0% | |
! | AGCTGGAATATATTTGAAGT+TGG | - | chr3.2:86561000-86561019 | MS.gene014989:CDS | 30.0% |
! | CAAAGTTTTCACAATTGAGA+AGG | - | chr3.2:86562707-86562726 | MS.gene014989:CDS | 30.0% |
! | GAATCTTCCTTTTCGATTTT+CGG | - | chr3.2:86561225-86561244 | MS.gene014989:CDS | 30.0% |
! | GCATCTGAAATATTTCTCAA+CGG | - | chr3.2:86563164-86563183 | MS.gene014989:CDS | 30.0% |
! | TCAATTCCGAATGTTTTTCA+AGG | - | chr3.2:86562105-86562124 | MS.gene014989:CDS | 30.0% |
! | TGAGGCTTTAACAATTTAAG+CGG | - | chr3.2:86563436-86563455 | MS.gene014989:CDS | 30.0% |
! | TGAGGCTTTAACTAAAAAAG+CGG | - | chr3.2:86563499-86563518 | MS.gene014989:CDS | 30.0% |
! | TTTGGTCTTTCTTTGAACTT+TGG | + | chr3.2:86563320-86563339 | None:intergenic | 30.0% |
!! | ACATGTTTTCAAGATTTTGG+AGG | - | chr3.2:86562932-86562951 | MS.gene014989:CDS | 30.0% |
!! | ATCATAATCGACTTGATGAA+AGG | - | chr3.2:86562832-86562851 | MS.gene014989:CDS | 30.0% |
!! | ATGTTCTGGTTTAGAATTGA+AGG | - | chr3.2:86561557-86561576 | MS.gene014989:CDS | 30.0% |
!! | GAGGAGTTTCTTATTTCTAA+AGG | - | chr3.2:86563212-86563231 | MS.gene014989:CDS | 30.0% |
!! | TCATAATCGACTTGATGAAA+GGG | - | chr3.2:86562833-86562852 | MS.gene014989:CDS | 30.0% |
!! | TCGACATGTTTTCAAGATTT+TGG | - | chr3.2:86562929-86562948 | MS.gene014989:CDS | 30.0% |
!!! | AAGACATAGCCAGTATTTTT+TGG | - | chr3.2:86561383-86561402 | MS.gene014989:CDS | 30.0% |
!!! | AGACATAGCCAGTATTTTTT+GGG | - | chr3.2:86561384-86561403 | MS.gene014989:CDS | 30.0% |
!!! | CTGCACAATATGTTTTAAAG+CGG | - | chr3.2:86562997-86563016 | MS.gene014989:CDS | 30.0% |
!!! | GTTTTTCAAGGTGTTTTTCA+TGG | - | chr3.2:86562117-86562136 | MS.gene014989:CDS | 30.0% |
AATCAGATCTCGACTACAAT+TGG | - | chr3.2:86562247-86562266 | MS.gene014989:intron | 35.0% | |
ATAACACTGGATTCTCTGTT+AGG | - | chr3.2:86560783-86560802 | MS.gene014989:intron | 35.0% | |
ATCAGATCTCGACTACAATT+GGG | - | chr3.2:86562248-86562267 | MS.gene014989:intron | 35.0% | |
CATAAATTCCAAGGCAAGAT+AGG | + | chr3.2:86561683-86561702 | None:intergenic | 35.0% | |
CGATTATGATCTTCAAACCT+TGG | + | chr3.2:86562822-86562841 | None:intergenic | 35.0% | |
CGTTATGCTTGTAACAAAGA+AGG | - | chr3.2:86560866-86560885 | MS.gene014989:CDS | 35.0% | |
CTAAAGAAAAACCAGAGGAA+AGG | - | chr3.2:86560966-86560985 | MS.gene014989:CDS | 35.0% | |
CTCATTCAAATCGTATGCAT+TGG | - | chr3.2:86562334-86562353 | MS.gene014989:intron | 35.0% | |
GAAAGCTAAAGAAAAACCAG+AGG | - | chr3.2:86560961-86560980 | MS.gene014989:CDS | 35.0% | |
GAAGCAAAAGAAAGATGATG+AGG | - | chr3.2:86563418-86563437 | MS.gene014989:CDS | 35.0% | |
GACAGAAATTCCTTATAGCT+CGG | - | chr3.2:86563393-86563412 | MS.gene014989:CDS | 35.0% | |
GAGAACATCTTATGAAGTGA+TGG | - | chr3.2:86561180-86561199 | MS.gene014989:CDS | 35.0% | |
GTCTGCTTAATCCTAAAAAC+AGG | - | chr3.2:86560903-86560922 | MS.gene014989:CDS | 35.0% | |
TATGGCTTGAGGTTTCTTAT+TGG | + | chr3.2:86562055-86562074 | None:intergenic | 35.0% | |
TCTAATGACAACTCGTCAAA+AGG | - | chr3.2:86561261-86561280 | MS.gene014989:CDS | 35.0% | |
TGTACAGAGCATAAATTCCA+AGG | + | chr3.2:86561692-86561711 | None:intergenic | 35.0% | |
TTCTCATACTCAACAAGAAC+TGG | + | chr3.2:86560944-86560963 | None:intergenic | 35.0% | |
! | CATCGTAAGAGTGTGTTATT+TGG | - | chr3.2:86561958-86561977 | MS.gene014989:CDS | 35.0% |
! | GAGGCTTTAACAATTTAAGC+GGG | - | chr3.2:86563437-86563456 | MS.gene014989:CDS | 35.0% |
! | GGTTTCGAATGTTGATGTTT+TGG | - | chr3.2:86562770-86562789 | MS.gene014989:CDS | 35.0% |
! | TCTTTCAATGCTTTTCTTCG+TGG | - | chr3.2:86562417-86562436 | MS.gene014989:intron | 35.0% |
! | TGGTTTAGAATTGAAGGTTC+TGG | - | chr3.2:86561563-86561582 | MS.gene014989:CDS | 35.0% |
! | TTTTAATGGAAGGCCTACTT+CGG | - | chr3.2:86562290-86562309 | MS.gene014989:intron | 35.0% |
! | TTTTTCATGGTCTTTGCTCA+TGG | - | chr3.2:86562130-86562149 | MS.gene014989:CDS | 35.0% |
!! | ACTGCTTTTGAAGACTTAGA+AGG | + | chr3.2:86563266-86563285 | None:intergenic | 35.0% |
!! | CGCTTTAAAACATATTGTGC+AGG | + | chr3.2:86562999-86563018 | None:intergenic | 35.0% |
!! | TATGCATTGGTCTTCAGTTT+GGG | - | chr3.2:86562347-86562366 | MS.gene014989:intron | 35.0% |
!! | TTCAAGATTTTGGAGGTCTT+AGG | - | chr3.2:86562939-86562958 | MS.gene014989:CDS | 35.0% |
!!! | AGACATCAGCTACTTTTGAT+TGG | - | chr3.2:86562001-86562020 | MS.gene014989:CDS | 35.0% |
!!! | CACAATATGTTTTAAAGCGG+TGG | - | chr3.2:86563000-86563019 | MS.gene014989:CDS | 35.0% |
AAGGGATAATCATGCTGAGT+TGG | - | chr3.2:86562506-86562525 | MS.gene014989:intron | 40.0% | |
AATCGAACAAGTGAATGGTC+TGG | + | chr3.2:86562453-86562472 | None:intergenic | 40.0% | |
ACCTATGATCTTTGCATAGC+TGG | + | chr3.2:86561810-86561829 | None:intergenic | 40.0% | |
AGTCGCTTCTTTGACCTAAT+TGG | + | chr3.2:86563344-86563363 | None:intergenic | 40.0% | |
ATCTGAGAGTGGACAATTGA+CGG | - | chr3.2:86560640-86560659 | MS.gene014989:CDS | 40.0% | |
ATGAGGAGGACACAACAAAA+GGG | - | chr3.2:86562664-86562683 | MS.gene014989:intron | 40.0% | |
ATGTCGTATGTTTGAGAACC+GGG | - | chr3.2:86562896-86562915 | MS.gene014989:CDS | 40.0% | |
ATTTATGCTCTGTACAGCCA+TGG | - | chr3.2:86561696-86561715 | MS.gene014989:CDS | 40.0% | |
ATTTCTCAACGGTGTTCTTG+AGG | - | chr3.2:86563175-86563194 | MS.gene014989:CDS | 40.0% | |
CATGTCGTATGTTTGAGAAC+CGG | - | chr3.2:86562895-86562914 | MS.gene014989:CDS | 40.0% | |
CTGAAATCCACCATGAATGT+TGG | - | chr3.2:86563053-86563072 | MS.gene014989:CDS | 40.0% | |
CTGTCTATGAACCATCTGTT+GGG | - | chr3.2:86563288-86563307 | MS.gene014989:CDS | 40.0% | |
GATTTCAGCTTATCGACAGA+CGG | + | chr3.2:86563041-86563060 | None:intergenic | 40.0% | |
GTCTTTAGTGCCAACATTCA+TGG | + | chr3.2:86563066-86563085 | None:intergenic | 40.0% | |
TATGAGGAGGACACAACAAA+AGG | - | chr3.2:86562663-86562682 | MS.gene014989:intron | 40.0% | |
TCCAGCTATGCAAAGATCAT+AGG | - | chr3.2:86561806-86561825 | MS.gene014989:CDS | 40.0% | |
TCCATCTGCCCAAAAAATAC+TGG | + | chr3.2:86561395-86561414 | None:intergenic | 40.0% | |
TTCATTTCAGCTGCCTTTCT+TGG | - | chr3.2:86561925-86561944 | MS.gene014989:CDS | 40.0% | |
TTGAAGAAAACCTTTCCCCA+AGG | - | chr3.2:86562802-86562821 | MS.gene014989:CDS | 40.0% | |
TTGATATCGTTGTGCTTGAG+TGG | + | chr3.2:86563090-86563109 | None:intergenic | 40.0% | |
TTTAGTGCCAACATTCATGG+TGG | + | chr3.2:86563063-86563082 | None:intergenic | 40.0% | |
TTTGCTTCTTCCGAGCTATA+AGG | + | chr3.2:86563406-86563425 | None:intergenic | 40.0% | |
! | TCATGCTGAGTTGGACTTTA+AGG | - | chr3.2:86562515-86562534 | MS.gene014989:intron | 40.0% |
! | TGAAGACTTAGAAGGCGTAA+CGG | + | chr3.2:86563258-86563277 | None:intergenic | 40.0% |
!! | AAGATTTTGGAGGTCTTAGG+TGG | - | chr3.2:86562942-86562961 | MS.gene014989:CDS | 40.0% |
!! | GTATGCATTGGTCTTCAGTT+TGG | - | chr3.2:86562346-86562365 | MS.gene014989:intron | 40.0% |
!! | TCACATGTTGGCCTGTTTTT+AGG | + | chr3.2:86560917-86560936 | None:intergenic | 40.0% |
!! | TCTTATGAAGTGATGGGTCA+AGG | - | chr3.2:86561187-86561206 | MS.gene014989:CDS | 40.0% |
AACTCGTCAAAAGGAGATGG+TGG | - | chr3.2:86561270-86561289 | MS.gene014989:CDS | 45.0% | |
AATGAAGCTCTCTCGAAACC+AGG | - | chr3.2:86561328-86561347 | MS.gene014989:CDS | 45.0% | |
AGAACTGGACTGTCACATGT+TGG | + | chr3.2:86560929-86560948 | None:intergenic | 45.0% | |
AGCCACTTAAAGTCCGAAGT+AGG | + | chr3.2:86562306-86562325 | None:intergenic | 45.0% | |
ATCCCAACAGTCAGCTTATG+CGG | - | chr3.2:86562565-86562584 | MS.gene014989:intron | 45.0% | |
CATGTCGACATAAGAAACCC+CGG | + | chr3.2:86562917-86562936 | None:intergenic | 45.0% | |
CTCAAGTAGCACAAATGCTC+TGG | + | chr3.2:86561091-86561110 | None:intergenic | 45.0% | |
GAAAAACCAGAGGAAAGGGT+TGG | - | chr3.2:86560971-86560990 | MS.gene014989:CDS | 45.0% | |
GACAACTCGTCAAAAGGAGA+TGG | - | chr3.2:86561267-86561286 | MS.gene014989:CDS | 45.0% | |
GATCTTCAAACCTTGGGGAA+AGG | + | chr3.2:86562815-86562834 | None:intergenic | 45.0% | |
GCTGTCTATGAACCATCTGT+TGG | - | chr3.2:86563287-86563306 | MS.gene014989:CDS | 45.0% | |
TCAAGCCATATACACAGACC+AGG | - | chr3.2:86562065-86562084 | MS.gene014989:CDS | 45.0% | |
TGGTCTGTGTATATGGCTTG+AGG | + | chr3.2:86562066-86562085 | None:intergenic | 45.0% | |
TGTCGTATGTTTGAGAACCG+GGG | - | chr3.2:86562897-86562916 | MS.gene014989:CDS | 45.0% | |
TGTCTTCTGCAGCATCAACT+TGG | + | chr3.2:86561369-86561388 | None:intergenic | 45.0% | |
TGTTCTTGAGGCAGGGAAAA+AGG | - | chr3.2:86563187-86563206 | MS.gene014989:CDS | 45.0% | |
TTACAACCAACCCTTTCCTC+TGG | + | chr3.2:86560980-86560999 | None:intergenic | 45.0% | |
! | ACTAGCCTGGTCTGTGTATA+TGG | + | chr3.2:86562073-86562092 | None:intergenic | 45.0% |
! | GTGAGGTCACATTTTACAGC+TGG | - | chr3.2:86562369-86562388 | MS.gene014989:intron | 45.0% |
! | TTTGGTGTAGTCCCAACAGA+TGG | + | chr3.2:86563302-86563321 | None:intergenic | 45.0% |
!! | ATTGGTCTTCAGTTTGGGTG+AGG | - | chr3.2:86562352-86562371 | MS.gene014989:intron | 45.0% |
!! | GAAAGGGTTGGTTGTAAAGC+TGG | - | chr3.2:86560983-86561002 | MS.gene014989:CDS | 45.0% |
!!! | GCCAGTATTTTTTGGGCAGA+TGG | - | chr3.2:86561391-86561410 | MS.gene014989:CDS | 45.0% |
ACTTCAACAACGCACTAGCC+TGG | + | chr3.2:86562086-86562105 | None:intergenic | 50.0% | |
GACCGCATAAGCTGACTGTT+GGG | + | chr3.2:86562570-86562589 | None:intergenic | 50.0% | |
GGCCTACTTCGGACTTTAAG+TGG | - | chr3.2:86562301-86562320 | MS.gene014989:intron | 50.0% | |
GGGTTGTCACAGTCGACATT+AGG | - | chr3.2:86562853-86562872 | MS.gene014989:CDS | 50.0% | |
GGTCTTTGCTCATGGCACAT+GGG | - | chr3.2:86562138-86562157 | MS.gene014989:CDS | 50.0% | |
TACACGTGTTTGCGCAGATG+CGG | - | chr3.2:86563139-86563158 | MS.gene014989:CDS | 50.0% | |
TCAACGGTGTTCTTGAGGCA+GGG | - | chr3.2:86563180-86563199 | MS.gene014989:CDS | 50.0% | |
TGGGTGATCCTATCTTGCCT+TGG | - | chr3.2:86561672-86561691 | MS.gene014989:CDS | 50.0% | |
TGGTCTTTGCTCATGGCACA+TGG | - | chr3.2:86562137-86562156 | MS.gene014989:CDS | 50.0% | |
!! | GAAGTGATGGGTCAAGGAGT+TGG | - | chr3.2:86561193-86561212 | MS.gene014989:CDS | 50.0% |
CTCAACGGTGTTCTTGAGGC+AGG | - | chr3.2:86563179-86563198 | MS.gene014989:CDS | 55.0% | |
GGACCGCATAAGCTGACTGT+TGG | + | chr3.2:86562571-86562590 | None:intergenic | 55.0% | |
TGAGGCAGGGAAAAAGGCAG+AGG | - | chr3.2:86563193-86563212 | MS.gene014989:CDS | 55.0% | |
! | CGTCAAAAGGAGATGGTGGC+TGG | - | chr3.2:86561274-86561293 | MS.gene014989:CDS | 55.0% |
!! | GTGATGGGTCAAGGAGTTGG+AGG | - | chr3.2:86561196-86561215 | MS.gene014989:CDS | 55.0% |
ACGTGTTTGCGCAGATGCGG+AGG | - | chr3.2:86563142-86563161 | MS.gene014989:CDS | 60.0% | |
GGGTCAAGGAGTTGGAGGCA+CGG | - | chr3.2:86561201-86561220 | MS.gene014989:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 86560620 | 86563574 | 86560620 | ID=MS.gene014989 |
chr3.2 | mRNA | 86560620 | 86563574 | 86560620 | ID=MS.gene014989.t1;Parent=MS.gene014989 |
chr3.2 | exon | 86562695 | 86563574 | 86562695 | ID=MS.gene014989.t1.exon1;Parent=MS.gene014989.t1 |
chr3.2 | CDS | 86562695 | 86563574 | 86562695 | ID=cds.MS.gene014989.t1;Parent=MS.gene014989.t1 |
chr3.2 | exon | 86560846 | 86562259 | 86560846 | ID=MS.gene014989.t1.exon2;Parent=MS.gene014989.t1 |
chr3.2 | CDS | 86560846 | 86562259 | 86560846 | ID=cds.MS.gene014989.t1;Parent=MS.gene014989.t1 |
chr3.2 | exon | 86560620 | 86560704 | 86560620 | ID=MS.gene014989.t1.exon3;Parent=MS.gene014989.t1 |
chr3.2 | CDS | 86560620 | 86560704 | 86560620 | ID=cds.MS.gene014989.t1;Parent=MS.gene014989.t1 |
Gene Sequence |
Protein sequence |