Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015023.t1 | XP_003603145.1 | 92.2 | 166 | 13 | 0 | 1 | 166 | 65 | 230 | 3.10E-83 | 317.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015023.t1 | Q9LVS0 | 66.2 | 74 | 22 | 1 | 18 | 91 | 87 | 157 | 1.7e-21 | 104.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015023.t1 | G7J7M5 | 92.2 | 166 | 13 | 0 | 1 | 166 | 65 | 230 | 2.3e-83 | 317.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene015023.t1 | TF | MYB-related |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015023.t1 | MTR_3g104370 | 92.169 | 166 | 13 | 0 | 1 | 166 | 65 | 230 | 9.41e-111 | 315 |
| MS.gene015023.t1 | MTR_4g100630 | 54.082 | 98 | 41 | 2 | 18 | 114 | 86 | 180 | 6.06e-29 | 108 |
| MS.gene015023.t1 | MTR_6g092540 | 58.621 | 87 | 32 | 2 | 24 | 109 | 94 | 177 | 7.86e-27 | 102 |
| MS.gene015023.t1 | MTR_8g101650 | 61.333 | 75 | 26 | 1 | 24 | 98 | 102 | 173 | 4.78e-26 | 100 |
| MS.gene015023.t1 | MTR_2g100930 | 66.176 | 68 | 20 | 1 | 24 | 91 | 106 | 170 | 3.13e-25 | 99.8 |
| MS.gene015023.t1 | MTR_5g069710 | 49.091 | 110 | 43 | 3 | 24 | 133 | 129 | 225 | 4.26e-25 | 98.6 |
| MS.gene015023.t1 | MTR_7g067080 | 60.759 | 79 | 27 | 1 | 11 | 85 | 120 | 198 | 5.27e-24 | 95.9 |
| MS.gene015023.t1 | MTR_3g462790 | 67.742 | 62 | 20 | 0 | 24 | 85 | 144 | 205 | 1.83e-23 | 94.4 |
| MS.gene015023.t1 | MTR_4g107230 | 71.698 | 53 | 15 | 0 | 21 | 73 | 78 | 130 | 2.15e-23 | 93.6 |
| MS.gene015023.t1 | MTR_5g081860 | 60.759 | 79 | 25 | 3 | 6 | 80 | 102 | 178 | 2.59e-23 | 93.2 |
| MS.gene015023.t1 | MTR_5g037080 | 72.222 | 54 | 15 | 0 | 21 | 74 | 96 | 149 | 3.15e-23 | 93.6 |
| MS.gene015023.t1 | MTR_1g111830 | 69.841 | 63 | 17 | 1 | 24 | 86 | 121 | 181 | 5.16e-23 | 92.0 |
| MS.gene015023.t1 | MTR_4g111975 | 57.746 | 71 | 27 | 1 | 24 | 94 | 135 | 202 | 1.19e-22 | 92.0 |
| MS.gene015023.t1 | MTR_5g088010 | 50.000 | 72 | 36 | 0 | 21 | 92 | 54 | 125 | 1.35e-20 | 85.5 |
| MS.gene015023.t1 | MTR_1g048660 | 65.385 | 52 | 18 | 0 | 22 | 73 | 7 | 58 | 1.08e-19 | 79.3 |
| MS.gene015023.t1 | MTR_2g090305 | 59.322 | 59 | 24 | 0 | 27 | 85 | 28 | 86 | 1.58e-19 | 81.6 |
| MS.gene015023.t1 | MTR_5g027570 | 51.389 | 72 | 34 | 1 | 21 | 92 | 86 | 156 | 3.82e-19 | 81.3 |
| MS.gene015023.t1 | MTR_0036s0260 | 59.322 | 59 | 24 | 0 | 27 | 85 | 28 | 86 | 4.47e-19 | 80.5 |
| MS.gene015023.t1 | MTR_5g088060 | 54.688 | 64 | 29 | 0 | 29 | 92 | 274 | 337 | 8.26e-19 | 82.8 |
| MS.gene015023.t1 | MTR_5g488160 | 54.688 | 64 | 29 | 0 | 29 | 92 | 274 | 337 | 8.26e-19 | 82.8 |
| MS.gene015023.t1 | MTR_8g063600 | 51.948 | 77 | 36 | 1 | 18 | 94 | 97 | 172 | 3.61e-18 | 79.7 |
| MS.gene015023.t1 | MTR_5g027550 | 59.259 | 54 | 22 | 0 | 21 | 74 | 71 | 124 | 6.38e-17 | 75.5 |
| MS.gene015023.t1 | MTR_4g015130 | 62.745 | 51 | 19 | 0 | 35 | 85 | 1 | 51 | 4.51e-16 | 69.7 |
| MS.gene015023.t1 | MTR_8g063870 | 50.000 | 68 | 32 | 1 | 29 | 94 | 94 | 161 | 5.80e-15 | 70.9 |
| MS.gene015023.t1 | MTR_1g083180 | 45.205 | 73 | 39 | 1 | 21 | 93 | 55 | 126 | 5.53e-14 | 66.6 |
| MS.gene015023.t1 | MTR_3g070110 | 48.571 | 70 | 32 | 1 | 29 | 94 | 97 | 166 | 8.88e-13 | 63.9 |
| MS.gene015023.t1 | MTR_5g075790 | 64.583 | 48 | 16 | 1 | 29 | 76 | 115 | 161 | 1.25e-12 | 63.9 |
| MS.gene015023.t1 | MTR_5g075760 | 64.583 | 48 | 16 | 1 | 29 | 76 | 107 | 153 | 1.44e-12 | 63.5 |
| MS.gene015023.t1 | MTR_1g033620 | 54.902 | 51 | 20 | 1 | 42 | 92 | 20 | 67 | 6.24e-12 | 62.0 |
| MS.gene015023.t1 | MTR_7g110040 | 70.732 | 41 | 11 | 1 | 40 | 80 | 11 | 50 | 8.92e-12 | 57.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015023.t1 | AT5G56840 | 47.794 | 136 | 67 | 2 | 24 | 159 | 88 | 219 | 4.57e-28 | 104 |
| MS.gene015023.t1 | AT5G47390 | 54.255 | 94 | 31 | 2 | 18 | 111 | 87 | 168 | 4.38e-27 | 104 |
| MS.gene015023.t1 | AT5G58900 | 54.545 | 88 | 39 | 1 | 24 | 111 | 138 | 224 | 3.45e-24 | 95.9 |
| MS.gene015023.t1 | AT5G61620 | 52.222 | 90 | 40 | 1 | 8 | 97 | 89 | 175 | 4.28e-24 | 96.3 |
| MS.gene015023.t1 | AT2G38090 | 67.742 | 62 | 20 | 0 | 24 | 85 | 138 | 199 | 6.48e-24 | 95.5 |
| MS.gene015023.t1 | AT1G70000 | 74.074 | 54 | 14 | 0 | 21 | 74 | 92 | 145 | 8.46e-24 | 94.4 |
| MS.gene015023.t1 | AT1G70000 | 74.074 | 54 | 14 | 0 | 21 | 74 | 92 | 145 | 8.46e-24 | 94.4 |
| MS.gene015023.t1 | AT5G01200 | 66.129 | 62 | 21 | 0 | 24 | 85 | 143 | 204 | 1.01e-23 | 94.4 |
| MS.gene015023.t1 | AT1G49010 | 60.563 | 71 | 25 | 2 | 24 | 94 | 131 | 198 | 1.15e-22 | 92.4 |
| MS.gene015023.t1 | AT3G16350 | 72.549 | 51 | 14 | 0 | 24 | 74 | 134 | 184 | 1.87e-22 | 92.8 |
| MS.gene015023.t1 | AT3G11280 | 66.129 | 62 | 21 | 0 | 24 | 85 | 124 | 185 | 1.21e-21 | 88.6 |
| MS.gene015023.t1 | AT3G11280 | 66.129 | 62 | 21 | 0 | 24 | 85 | 124 | 185 | 1.21e-21 | 88.6 |
| MS.gene015023.t1 | AT5G04760 | 65.079 | 63 | 20 | 1 | 24 | 86 | 96 | 156 | 1.43e-21 | 87.4 |
| MS.gene015023.t1 | AT5G08520 | 57.746 | 71 | 27 | 2 | 24 | 94 | 115 | 182 | 1.51e-21 | 89.0 |
| MS.gene015023.t1 | AT1G74840 | 70.000 | 50 | 15 | 0 | 24 | 73 | 93 | 142 | 3.29e-21 | 87.0 |
| MS.gene015023.t1 | AT1G74840 | 70.000 | 50 | 15 | 0 | 24 | 73 | 93 | 142 | 4.62e-21 | 87.0 |
| MS.gene015023.t1 | AT5G05790 | 64.516 | 62 | 22 | 0 | 24 | 85 | 128 | 189 | 5.46e-21 | 87.0 |
| MS.gene015023.t1 | AT5G05790 | 64.516 | 62 | 22 | 0 | 24 | 85 | 128 | 189 | 5.46e-21 | 87.0 |
| MS.gene015023.t1 | AT1G19000 | 70.000 | 50 | 15 | 0 | 24 | 73 | 99 | 148 | 9.49e-21 | 86.7 |
| MS.gene015023.t1 | AT1G19000 | 70.000 | 50 | 15 | 0 | 24 | 73 | 99 | 148 | 9.49e-21 | 86.7 |
| MS.gene015023.t1 | AT3G10580 | 55.072 | 69 | 26 | 1 | 24 | 92 | 92 | 155 | 2.48e-20 | 85.1 |
| MS.gene015023.t1 | AT3G10580 | 55.072 | 69 | 26 | 1 | 24 | 92 | 92 | 155 | 3.94e-20 | 85.1 |
| MS.gene015023.t1 | AT4G09450 | 51.220 | 82 | 37 | 2 | 24 | 103 | 88 | 168 | 8.70e-19 | 79.7 |
| MS.gene015023.t1 | AT5G23650 | 62.000 | 50 | 19 | 0 | 24 | 73 | 117 | 166 | 2.67e-14 | 69.7 |
| MS.gene015023.t1 | AT3G10590 | 53.448 | 58 | 27 | 0 | 28 | 85 | 112 | 169 | 8.01e-13 | 63.9 |
Find 39 sgRNAs with CRISPR-Local
Find 61 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGGAGTCAAATTTATTTC+TGG | 0.179125 | 3.2:-86202845 | None:intergenic |
| TCCTCCTTGCCTACCATGTT+TGG | 0.292024 | 3.2:+86202127 | None:intergenic |
| CTTAGAGGACTTGAGAAGAT+TGG | 0.328823 | 3.2:+86202558 | MS.gene015023:CDS |
| AGAAGATTGGGAAGGGTAAC+TGG | 0.333260 | 3.2:+86202571 | MS.gene015023:CDS |
| CTTATGCAGCTGATATCATT+TGG | 0.348494 | 3.2:-86202863 | None:intergenic |
| TTTGTGCATGACTAGCTACC+TGG | 0.362976 | 3.2:-86202635 | None:intergenic |
| AATTTCTACTTCCACTTAGT+TGG | 0.375503 | 3.2:-86202886 | None:intergenic |
| CTCAACATTCAATACTGAAA+TGG | 0.409371 | 3.2:+86202933 | MS.gene015023:CDS |
| TTAGAGGACTTGAGAAGATT+GGG | 0.415766 | 3.2:+86202559 | MS.gene015023:CDS |
| TCCGTTGATGTTGAAGAGTT+AGG | 0.422454 | 3.2:-86202956 | None:intergenic |
| GCAAGTTTGAGTTCTAAATC+AGG | 0.432705 | 3.2:-86203001 | None:intergenic |
| GAGCACATGATATTTCTTAG+AGG | 0.438938 | 3.2:+86202543 | MS.gene015023:CDS |
| TGATATATGCTCGTTTCTTA+CGG | 0.451802 | 3.2:-86202173 | None:intergenic |
| CATGCCTCTGTTAGCTCCAA+TGG | 0.472733 | 3.2:-86203034 | None:intergenic |
| GGACTTGAGAAGATTGGGAA+GGG | 0.480087 | 3.2:+86202564 | MS.gene015023:CDS |
| CTCTGTTAGCTCCAATGGCA+TGG | 0.483024 | 3.2:-86203029 | None:intergenic |
| AGGACTTGAGAAGATTGGGA+AGG | 0.495301 | 3.2:+86202563 | MS.gene015023:CDS |
| TTACATAATGGAGGCTAAGA+TGG | 0.500282 | 3.2:-86202707 | None:intergenic |
| ACTTGCAACTCCCATGCCAT+TGG | 0.501098 | 3.2:+86203018 | MS.gene015023:CDS |
| GTTGAGGATGAGAAAGCCAC+TGG | 0.522676 | 3.2:-86202916 | None:intergenic |
| AAATCAGGTGCTGCACTATG+AGG | 0.523156 | 3.2:-86202986 | None:intergenic |
| TCTGTTAGCTCCAATGGCAT+GGG | 0.536107 | 3.2:-86203028 | None:intergenic |
| TGATCAAGCTATTCTGAGAC+TGG | 0.538315 | 3.2:-86202671 | None:intergenic |
| ACACTACTGGTTAGCTTAAG+GGG | 0.538405 | 3.2:-86203059 | None:intergenic |
| TTGTGCATGACTAGCTACCT+GGG | 0.547274 | 3.2:-86202634 | None:intergenic |
| TTAATTTACTTACATAATGG+AGG | 0.564586 | 3.2:-86202716 | None:intergenic |
| ATGTGCTCCTCCTCGGTCCA+CGG | 0.572063 | 3.2:-86202528 | None:intergenic |
| GCCTAACTCTTCAACATCAA+CGG | 0.576928 | 3.2:+86202955 | MS.gene015023:CDS |
| CATTTCAGTATTGAATGTTG+AGG | 0.583001 | 3.2:-86202932 | None:intergenic |
| AGCTGCATAAGCCAACTAAG+TGG | 0.584599 | 3.2:+86202875 | MS.gene015023:CDS |
| AAATATCATGTGCTCCTCCT+CGG | 0.585344 | 3.2:-86202535 | None:intergenic |
| TTGAGGATGAGAAAGCCACT+GGG | 0.600136 | 3.2:-86202915 | None:intergenic |
| ATCAGGTATGCCGTGGACCG+AGG | 0.606863 | 3.2:+86202518 | MS.gene015023:intron |
| GCATGACTAGCTACCTGGGT+TGG | 0.613754 | 3.2:-86202630 | None:intergenic |
| ATTGGGAAGGGTAACTGGAG+AGG | 0.616689 | 3.2:+86202576 | MS.gene015023:CDS |
| AGGTATGCCGTGGACCGAGG+AGG | 0.665092 | 3.2:+86202521 | MS.gene015023:intron |
| TCAAGCTATTCTGAGACTGG+CGG | 0.679211 | 3.2:-86202668 | None:intergenic |
| CATGCCATTGGAGCTAACAG+AGG | 0.690851 | 3.2:+86203030 | MS.gene015023:CDS |
| TGAGGATGAGAAAGCCACTG+GGG | 0.761973 | 3.2:-86202914 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCTTATTCTATATTTAATT+TGG | + | chr3.2:86202804-86202823 | MS.gene015023:intron | 10.0% |
| !!! | ATTTTAATTTACTTACATAA+TGG | - | chr3.2:86202722-86202741 | None:intergenic | 10.0% |
| !!! | AATTAAAGAAGTTTAAAGTA+AGG | - | chr3.2:86202778-86202797 | None:intergenic | 15.0% |
| !!! | ATAATTATAACCTTTTTTAC+TGG | - | chr3.2:86202209-86202228 | None:intergenic | 15.0% |
| !!! | TAATTATAACCTTTTTTACT+GGG | - | chr3.2:86202208-86202227 | None:intergenic | 15.0% |
| !! | TTAATTTACTTACATAATGG+AGG | - | chr3.2:86202719-86202738 | None:intergenic | 20.0% |
| !!! | TATTCTATATTTAATTTGGC+AGG | + | chr3.2:86202808-86202827 | MS.gene015023:intron | 20.0% |
| ! | TCCAACTAATGAGAAAATTA+AGG | + | chr3.2:86202323-86202342 | MS.gene015023:intron | 25.0% |
| ! | TGAATCCAAAATTCAAAATC+TGG | + | chr3.2:86202283-86202302 | MS.gene015023:intron | 25.0% |
| !! | TCCTTAATTTTCTCATTAGT+TGG | - | chr3.2:86202327-86202346 | None:intergenic | 25.0% |
| !! | TTTGGAGTCAAATTTATTTC+TGG | - | chr3.2:86202848-86202867 | None:intergenic | 25.0% |
| !!! | ATGTACATTTTTTTGTGATC+AGG | + | chr3.2:86202501-86202520 | MS.gene015023:intron | 25.0% |
| !!! | TGCACGTAACTATTTTTATA+TGG | - | chr3.2:86202751-86202770 | None:intergenic | 25.0% |
| AATTTCTACTTCCACTTAGT+TGG | - | chr3.2:86202889-86202908 | None:intergenic | 30.0% | |
| CTCAACATTCAATACTGAAA+TGG | + | chr3.2:86202933-86202952 | MS.gene015023:CDS | 30.0% | |
| TAGAATTGTGAATTGTTGCT+TGG | + | chr3.2:86202462-86202481 | MS.gene015023:intron | 30.0% | |
| TGATATATGCTCGTTTCTTA+CGG | - | chr3.2:86202176-86202195 | None:intergenic | 30.0% | |
| ! | CATTTCAGTATTGAATGTTG+AGG | - | chr3.2:86202935-86202954 | None:intergenic | 30.0% |
| !! | AGTTTTGTGAGGGTTAAATT+AGG | + | chr3.2:86202259-86202278 | MS.gene015023:intron | 30.0% |
| !! | CTATATTTAATTTGGCAGGT+GGG | + | chr3.2:86202812-86202831 | MS.gene015023:intron | 30.0% |
| !! | TCTATATTTAATTTGGCAGG+TGG | + | chr3.2:86202811-86202830 | MS.gene015023:intron | 30.0% |
| ACAATCAGACCCAGTAAAAA+AGG | + | chr3.2:86202196-86202215 | MS.gene015023:CDS | 35.0% | |
| CTTATGCAGCTGATATCATT+TGG | - | chr3.2:86202866-86202885 | None:intergenic | 35.0% | |
| GAGCACATGATATTTCTTAG+AGG | + | chr3.2:86202543-86202562 | MS.gene015023:CDS | 35.0% | |
| TTAGAGGACTTGAGAAGATT+GGG | + | chr3.2:86202559-86202578 | MS.gene015023:CDS | 35.0% | |
| ! | CTTGGCCAGATTTTGAATTT+TGG | - | chr3.2:86202291-86202310 | None:intergenic | 35.0% |
| ! | TTACATAATGGAGGCTAAGA+TGG | - | chr3.2:86202710-86202729 | None:intergenic | 35.0% |
| !! | CTTACAGATCAGTTTTGTGA+GGG | + | chr3.2:86202249-86202268 | MS.gene015023:intron | 35.0% |
| !! | GCAAGTTTGAGTTCTAAATC+AGG | - | chr3.2:86203004-86203023 | None:intergenic | 35.0% |
| AAATATCATGTGCTCCTCCT+CGG | - | chr3.2:86202538-86202557 | None:intergenic | 40.0% | |
| AACAACAAAAACACCAACCC+AGG | + | chr3.2:86202617-86202636 | MS.gene015023:CDS | 40.0% | |
| CCTCACAAAACTGATCTGTA+AGG | - | chr3.2:86202251-86202270 | None:intergenic | 40.0% | |
| CTTAGAGGACTTGAGAAGAT+TGG | + | chr3.2:86202558-86202577 | MS.gene015023:CDS | 40.0% | |
| GCCTAACTCTTCAACATCAA+CGG | + | chr3.2:86202955-86202974 | MS.gene015023:CDS | 40.0% | |
| TCCGTTGATGTTGAAGAGTT+AGG | - | chr3.2:86202959-86202978 | None:intergenic | 40.0% | |
| ! | GTAGAAATTTTCTTCCCCAG+TGG | + | chr3.2:86202900-86202919 | MS.gene015023:CDS | 40.0% |
| !! | CCTTACAGATCAGTTTTGTG+AGG | + | chr3.2:86202248-86202267 | MS.gene015023:intron | 40.0% |
| !! | TGATCAAGCTATTCTGAGAC+TGG | - | chr3.2:86202674-86202693 | None:intergenic | 40.0% |
| AGAAGATTGGGAAGGGTAAC+TGG | + | chr3.2:86202571-86202590 | MS.gene015023:CDS | 45.0% | |
| AGCTGCATAAGCCAACTAAG+TGG | + | chr3.2:86202875-86202894 | MS.gene015023:CDS | 45.0% | |
| AGGACTTGAGAAGATTGGGA+AGG | + | chr3.2:86202563-86202582 | MS.gene015023:CDS | 45.0% | |
| GGACTTGAGAAGATTGGGAA+GGG | + | chr3.2:86202564-86202583 | MS.gene015023:CDS | 45.0% | |
| TCTGTTAGCTCCAATGGCAT+GGG | - | chr3.2:86203031-86203050 | None:intergenic | 45.0% | |
| TTGAGGATGAGAAAGCCACT+GGG | - | chr3.2:86202918-86202937 | None:intergenic | 45.0% | |
| ! | AAATCAGGTGCTGCACTATG+AGG | - | chr3.2:86202989-86203008 | None:intergenic | 45.0% |
| ! | TTGTGCATGACTAGCTACCT+GGG | - | chr3.2:86202637-86202656 | None:intergenic | 45.0% |
| ! | TTTGTGCATGACTAGCTACC+TGG | - | chr3.2:86202638-86202657 | None:intergenic | 45.0% |
| ! | TTTTGTGATCAGGTATGCCG+TGG | + | chr3.2:86202511-86202530 | MS.gene015023:intron | 45.0% |
| !! | TCAAGCTATTCTGAGACTGG+CGG | - | chr3.2:86202671-86202690 | None:intergenic | 45.0% |
| ACTTGCAACTCCCATGCCAT+TGG | + | chr3.2:86203018-86203037 | MS.gene015023:CDS | 50.0% | |
| ATTGGGAAGGGTAACTGGAG+AGG | + | chr3.2:86202576-86202595 | MS.gene015023:CDS | 50.0% | |
| CATGCCATTGGAGCTAACAG+AGG | + | chr3.2:86203030-86203049 | MS.gene015023:CDS | 50.0% | |
| CATGCCTCTGTTAGCTCCAA+TGG | - | chr3.2:86203037-86203056 | None:intergenic | 50.0% | |
| CTCTGTTAGCTCCAATGGCA+TGG | - | chr3.2:86203032-86203051 | None:intergenic | 50.0% | |
| GTTGAGGATGAGAAAGCCAC+TGG | - | chr3.2:86202919-86202938 | None:intergenic | 50.0% | |
| TGAGGATGAGAAAGCCACTG+GGG | - | chr3.2:86202917-86202936 | None:intergenic | 50.0% | |
| ! | GTTGGAGCACTCACTTCACT+TGG | - | chr3.2:86202309-86202328 | None:intergenic | 50.0% |
| ! | GCATGACTAGCTACCTGGGT+TGG | - | chr3.2:86202633-86202652 | None:intergenic | 55.0% |
| ATCAGGTATGCCGTGGACCG+AGG | + | chr3.2:86202518-86202537 | MS.gene015023:intron | 60.0% | |
| ATGTGCTCCTCCTCGGTCCA+CGG | - | chr3.2:86202531-86202550 | None:intergenic | 60.0% | |
| AGGTATGCCGTGGACCGAGG+AGG | + | chr3.2:86202521-86202540 | MS.gene015023:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 86202142 | 86203066 | 86202142 | ID=MS.gene015023 |
| chr3.2 | mRNA | 86202142 | 86203066 | 86202142 | ID=MS.gene015023.t1;Parent=MS.gene015023 |
| chr3.2 | exon | 86202142 | 86202217 | 86202142 | ID=MS.gene015023.t1.exon1;Parent=MS.gene015023.t1 |
| chr3.2 | CDS | 86202142 | 86202217 | 86202142 | ID=cds.MS.gene015023.t1;Parent=MS.gene015023.t1 |
| chr3.2 | exon | 86202523 | 86202725 | 86202523 | ID=MS.gene015023.t1.exon2;Parent=MS.gene015023.t1 |
| chr3.2 | CDS | 86202523 | 86202725 | 86202523 | ID=cds.MS.gene015023.t1;Parent=MS.gene015023.t1 |
| chr3.2 | exon | 86202830 | 86203066 | 86202830 | ID=MS.gene015023.t1.exon3;Parent=MS.gene015023.t1 |
| chr3.2 | CDS | 86202830 | 86203066 | 86202830 | ID=cds.MS.gene015023.t1;Parent=MS.gene015023.t1 |
| Gene Sequence |
| Protein sequence |
