AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene015033

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene015033.t1 MTR_3g104100 79.101 378 42 1 5 345 1 378 0.0 577
MS.gene015033.t1 MTR_2g081040 70.492 366 49 2 1 329 1 344 7.56e-165 464
MS.gene015033.t1 MTR_3g030700 68.044 363 77 3 1 329 1 358 9.82e-156 442
MS.gene015033.t1 MTR_3g498695 48.387 217 99 2 119 322 242 458 3.70e-62 206
MS.gene015033.t1 MTR_3g498695 48.387 217 99 2 119 322 242 458 3.87e-62 206
MS.gene015033.t1 MTR_7g083900 49.763 211 102 2 125 333 249 457 8.16e-55 186
MS.gene015033.t1 MTR_7g083900 51.500 200 95 1 125 322 249 448 1.13e-54 186
MS.gene015033.t1 MTR_5g030770 40.513 195 87 7 147 334 134 306 1.16e-27 110
MS.gene015033.t1 MTR_3g111290 35.593 177 90 4 146 322 157 309 6.60e-26 106
MS.gene015033.t1 MTR_5g030770 38.974 195 84 6 147 334 134 300 8.02e-26 105
MS.gene015033.t1 MTR_1g112680 29.268 205 118 4 140 322 296 495 2.69e-21 95.1
MS.gene015033.t1 MTR_4g057270 33.918 171 96 5 155 318 142 302 7.69e-19 86.7
MS.gene015033.t1 MTR_8g064700 30.814 172 106 3 155 322 237 399 4.25e-18 85.1
MS.gene015033.t1 MTR_8g024790 33.929 168 100 4 158 324 287 444 1.54e-17 83.6
MS.gene015033.t1 MTR_8g024770 33.974 156 95 3 158 312 275 423 6.27e-17 82.0
MS.gene015033.t1 MTR_2g084280 32.065 184 107 5 155 335 126 294 1.36e-16 79.7
MS.gene015033.t1 MTR_8g067280 30.189 159 110 1 157 314 457 615 1.53e-14 75.1
MS.gene015033.t1 MTR_2g010450 25.238 210 145 4 135 341 150 350 7.13e-14 72.0
MS.gene015033.t1 MTR_4g091990 26.923 182 100 3 131 310 14 164 5.69e-13 67.4
MS.gene015033.t1 MTR_4g092700 24.783 230 138 7 131 343 121 332 8.99e-13 68.6
MS.gene015033.t1 MTR_2g038040 28.723 188 108 7 136 312 33 205 1.05e-12 67.4
MS.gene015033.t1 MTR_8g069740 27.568 185 122 6 138 318 84 260 5.46e-12 65.9
MS.gene015033.t1 MTR_5g030430 31.481 162 104 4 157 314 488 646 5.60e-12 67.4
MS.gene015033.t1 MTR_1g072320 28.571 175 112 5 155 323 458 625 5.88e-12 67.0
MS.gene015033.t1 MTR_8g027495 46.377 69 32 1 166 229 462 530 1.18e-11 66.2
MS.gene015033.t1 MTR_5g014640 24.201 219 146 4 107 318 92 297 2.04e-11 64.7
MS.gene015033.t1 MTR_7g117670 43.662 71 37 1 157 224 397 467 3.63e-11 64.7
MS.gene015033.t1 MTR_0250s0040 27.982 218 136 6 104 318 35 234 7.85e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene015033.t1 AT3G26744 47.465 217 106 1 115 323 252 468 1.32e-56 191
MS.gene015033.t1 AT3G26744 47.685 216 105 1 115 322 252 467 1.99e-56 191
MS.gene015033.t1 AT3G26744 47.685 216 105 1 115 322 252 467 1.99e-56 191
MS.gene015033.t1 AT3G26744 47.685 216 105 1 115 322 252 467 1.99e-56 191
MS.gene015033.t1 AT1G12860 53.216 171 74 2 160 329 265 430 9.31e-54 183
MS.gene015033.t1 AT1G12860 53.939 165 70 2 160 323 265 424 3.14e-53 181
MS.gene015033.t1 AT2G16910 38.857 175 93 4 161 322 313 486 2.52e-25 107
MS.gene015033.t1 AT5G65640 38.095 189 96 6 140 322 150 323 5.32e-25 103
MS.gene015033.t1 AT5G10570 38.710 186 77 7 139 316 125 281 2.86e-24 101
MS.gene015033.t1 AT2G28160 32.143 196 118 6 118 309 87 271 1.39e-16 79.7
MS.gene015033.t1 AT2G28160 32.143 196 118 6 118 309 87 271 1.67e-16 79.3
MS.gene015033.t1 AT5G46760 32.278 158 101 2 157 314 410 561 5.05e-16 79.7
MS.gene015033.t1 AT5G65640 50.000 84 36 1 140 217 150 233 1.19e-15 76.6
MS.gene015033.t1 AT4G29930 29.221 154 88 3 161 311 53 188 1.17e-14 72.8
MS.gene015033.t1 AT4G29930 30.864 162 101 5 161 311 53 214 1.89e-14 72.8
MS.gene015033.t1 AT4G29930 30.864 162 101 5 161 311 53 214 1.89e-14 72.8
MS.gene015033.t1 AT4G29930 30.864 162 101 5 161 311 53 214 1.94e-14 72.8
MS.gene015033.t1 AT4G29930 30.519 154 83 3 161 311 53 185 4.83e-14 70.9
MS.gene015033.t1 AT4G29930 30.519 154 83 3 161 311 53 185 5.33e-14 71.2
MS.gene015033.t1 AT4G17880 31.250 160 96 5 157 314 411 558 2.39e-13 71.2
MS.gene015033.t1 AT4G00870 38.298 94 54 2 127 218 214 305 2.58e-13 70.9
MS.gene015033.t1 AT1G63650 30.968 155 95 4 165 309 408 560 1.17e-12 69.3
MS.gene015033.t1 AT1G63650 30.968 155 95 4 165 309 408 560 1.17e-12 69.3
MS.gene015033.t1 AT1G63650 30.968 155 95 4 165 309 408 560 1.17e-12 69.3
MS.gene015033.t1 AT4G09820 25.628 199 109 7 150 343 348 512 1.51e-12 68.9
MS.gene015033.t1 AT1G01260 37.500 104 53 3 123 217 388 488 3.04e-12 68.2
MS.gene015033.t1 AT1G01260 37.500 104 53 3 123 217 388 488 3.04e-12 68.2
MS.gene015033.t1 AT1G01260 37.500 104 53 3 123 217 388 488 3.04e-12 68.2
MS.gene015033.t1 AT1G32640 24.662 296 149 11 64 314 329 595 3.59e-12 67.8
MS.gene015033.t1 AT4G29930 44.615 65 36 0 161 225 53 117 6.78e-12 63.9
MS.gene015033.t1 AT5G57150 44.595 74 39 1 154 225 46 119 8.78e-12 64.3
MS.gene015033.t1 AT5G57150 44.595 74 39 1 154 225 47 120 1.01e-11 64.3
MS.gene015033.t1 AT5G57150 44.595 74 39 1 154 225 47 120 1.10e-11 64.3
MS.gene015033.t1 AT5G57150 44.595 74 39 1 154 225 46 119 1.35e-11 64.3
MS.gene015033.t1 AT2G22760 22.449 196 115 4 143 318 90 268 1.49e-11 64.7
MS.gene015033.t1 AT5G57150 44.595 74 39 1 154 225 47 120 1.56e-11 64.3
MS.gene015033.t1 AT2G46510 45.902 61 33 0 157 217 390 450 1.77e-11 65.5
MS.gene015033.t1 AT2G22760 22.449 196 115 4 143 318 90 268 2.67e-11 63.9
MS.gene015033.t1 AT4G37850 25.414 181 126 5 164 344 154 325 7.48e-11 63.2
MS.gene015033.t1 AT4G37850 25.414 181 126 5 164 344 154 325 7.48e-11 63.2

Find 77 sgRNAs with CRISPR-Local

Find 325 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCGGTAGATTTGAGAAAT+TGG 0.166436 3.2:+86118672 None:intergenic
TACGATACCTTGGTAATCTT+TGG 0.220172 3.2:+86118208 None:intergenic
TAGATTTGAGAAATTGGATA+TGG 0.269646 3.2:+86118678 None:intergenic
GTTGAAGGAGTTTGAGAATA+AGG 0.272801 3.2:-86118524 MS.gene015033:CDS
GGTATTTGCAGGTAGATGTT+AGG 0.324730 3.2:-86114097 MS.gene015033:intron
TTAAGACCTGACACATTGTT+AGG 0.350933 3.2:+86115490 None:intergenic
AAGAAAATGAGGAACCTAAA+TGG 0.357926 3.2:+86118710 None:intergenic
TGCAAACAAACCAGGTGTTT+TGG 0.363305 3.2:-86114036 MS.gene015033:CDS
TTGATATTGTCATTAATATT+CGG 0.365214 3.2:+86118655 None:intergenic
AGATGTTAGGGTAAGGGAAG+GGG 0.376203 3.2:-86114084 MS.gene015033:CDS
ACGATACCTTGGTAATCTTT+GGG 0.376698 3.2:+86118209 None:intergenic
TTGCACAATTAACCTCGATA+TGG 0.377511 3.2:-86118546 MS.gene015033:CDS
ATGGACAAAATTTCAATACT+TGG 0.390066 3.2:-86115676 MS.gene015033:CDS
TGTTGGGAAGATGGGGAACC+AGG 0.394023 3.2:-86118437 MS.gene015033:CDS
AGTGTTGGTGTTGGGAAGAT+GGG 0.396480 3.2:-86118445 MS.gene015033:CDS
GATGTTAGGGTAAGGGAAGG+GGG 0.402944 3.2:-86114083 MS.gene015033:CDS
GTTTGTTTGCACAAAACATA+TGG 0.404542 3.2:+86114048 None:intergenic
TTGTTCTCATGATCACATAT+TGG 0.416449 3.2:+86113807 None:intergenic
AAGTAAATAAGTACCTTTGT+TGG 0.430963 3.2:+86115460 None:intergenic
TTTCTGCCTTCGCTTCTTCT+CGG 0.437246 3.2:+86118267 None:intergenic
TGGACAAAATTTCAATACTT+GGG 0.438929 3.2:-86115675 MS.gene015033:CDS
GAGTGTTGGTGTTGGGAAGA+TGG 0.443794 3.2:-86118446 MS.gene015033:CDS
TCGGCGATGAGACTCTTTGA+TGG 0.448765 3.2:+86118286 None:intergenic
ACCATCACCAACAATCCATT+TGG 0.465647 3.2:-86118619 MS.gene015033:CDS
GTATTTGCAGGTAGATGTTA+GGG 0.469646 3.2:-86114096 MS.gene015033:intron
TTCTTTCATTTGAACTGGAA+GGG 0.474550 3.2:+86115522 None:intergenic
TGCAGGTAGATGTTAGGGTA+AGG 0.474740 3.2:-86114091 MS.gene015033:intron
TTATTTCCTAACAATGTGTC+AGG 0.476438 3.2:-86115496 MS.gene015033:CDS
CCTTGGATTGAATGTTCACC+AGG 0.476679 3.2:-86113988 MS.gene015033:CDS
GCAGGTAGATGTTAGGGTAA+GGG 0.478930 3.2:-86114090 MS.gene015033:intron
ATGAAGGCATTGGATAGCCT+TGG 0.483753 3.2:-86114005 MS.gene015033:CDS
ACTCAACAACAAAACATTGT+TGG 0.483783 3.2:-86118766 MS.gene015033:CDS
TCATTTATGCCACCGCCTAC+AGG 0.487852 3.2:-86115574 MS.gene015033:CDS
GGGACAAGTTCTTCGATACA+AGG 0.496654 3.2:+86118805 None:intergenic
GACATTACCAAATGGATTGT+TGG 0.497830 3.2:+86118612 None:intergenic
TAAAACAGCTTATGTTAGCC+TGG 0.498246 3.2:+86113970 None:intergenic
TTTCTTTCATTTGAACTGGA+AGG 0.499926 3.2:+86115521 None:intergenic
AGATTTGAGAAATTGGATAT+GGG 0.502394 3.2:+86118679 None:intergenic
TAGATGTTAGGGTAAGGGAA+GGG 0.507834 3.2:-86114085 MS.gene015033:CDS
AAATAAGTACCTTTGTTGGT+TGG 0.508995 3.2:+86115464 None:intergenic
GGCGGTGGCATAAATGATCT+AGG 0.520460 3.2:+86115580 None:intergenic
GGCGTCGACTATGAAGGCAT+TGG 0.524252 3.2:-86114015 MS.gene015033:CDS
CTAATGAGAGTGTTGGTGTT+GGG 0.532269 3.2:-86118453 MS.gene015033:CDS
TCGATTTGGGGTTTCAACAC+AGG 0.539378 3.2:+86118856 None:intergenic
ATTAACCTCGATATGGTTGA+AGG 0.542070 3.2:-86118539 MS.gene015033:CDS
GAGAAATTGGATATGGGCGA+TGG 0.547203 3.2:+86118685 None:intergenic
AAAGATGGAAATGAAGAGGT+TGG 0.550194 3.2:-86118496 MS.gene015033:CDS
ACAGAAGTATTGGGGTCTGA+AGG 0.550721 3.2:+86118742 None:intergenic
AATGACAATATCAACATCAC+TGG 0.551581 3.2:-86118646 MS.gene015033:CDS
AAATTGAAGACATTACCAAA+TGG 0.551861 3.2:+86118604 None:intergenic
AAGAAGCGAAGGCAGAAACT+CGG 0.556353 3.2:-86118262 MS.gene015033:CDS
GGACAAAATTTCAATACTTG+GGG 0.557700 3.2:-86115674 MS.gene015033:CDS
TTGAACTGGAAGGGCTGACA+TGG 0.561404 3.2:+86115531 None:intergenic
ATAGTCGACGCCAAAACACC+TGG 0.570568 3.2:+86114026 None:intergenic
GTTAATTGTGCAACTGACAA+TGG 0.577189 3.2:+86118556 None:intergenic
GTCTTCAATTTAGATTCCAA+AGG 0.578166 3.2:-86118592 MS.gene015033:CDS
GATGGAAATGAAGAGGTTGG+CGG 0.581667 3.2:-86118493 MS.gene015033:CDS
ATGTGAGTTCCTGTAGGCGG+TGG 0.584540 3.2:+86115565 None:intergenic
TCTAGATGTGTTCAAAGCTG+AGG 0.585169 3.2:-86113937 MS.gene015033:intron
GGGCGATGGCAAAGAAAATG+AGG 0.586268 3.2:+86118699 None:intergenic
GGAAATGAAGAGGTTGGCGG+AGG 0.586382 3.2:-86118490 MS.gene015033:CDS
CCTGGTGAACATTCAATCCA+AGG 0.587601 3.2:+86113988 None:intergenic
TCATCGCCGAGAAGAAGCGA+AGG 0.591349 3.2:-86118273 MS.gene015033:CDS
AAATGGATTGTTGGTGATGG+TGG 0.593173 3.2:+86118621 None:intergenic
GTGTTGGTGTTGGGAAGATG+GGG 0.595142 3.2:-86118444 MS.gene015033:CDS
GTAGATGTTAGGGTAAGGGA+AGG 0.599192 3.2:-86114086 MS.gene015033:CDS
ACCAAATGGATTGTTGGTGA+TGG 0.608335 3.2:+86118618 None:intergenic
TCTAATGAGAGTGTTGGTGT+TGG 0.611113 3.2:-86118454 MS.gene015033:CDS
GTTGGGAAGATGGGGAACCA+GGG 0.613946 3.2:-86118436 MS.gene015033:intron
CATGACTCTAATGAGAGTGT+TGG 0.632191 3.2:-86118460 MS.gene015033:CDS
GTCATAATGTGAGTTCCTGT+AGG 0.642737 3.2:+86115559 None:intergenic
GAAGGAGTTTGAGAATAAGG+CGG 0.653004 3.2:-86118521 MS.gene015033:CDS
TGTTGTCCCAAAGATTACCA+AGG 0.668590 3.2:-86118215 MS.gene015033:intron
AAACTCCTTCAACCATATCG+AGG 0.678488 3.2:+86118534 None:intergenic
ATAATGTGAGTTCCTGTAGG+CGG 0.737699 3.2:+86115562 None:intergenic
ACAAGTTCTTCGATACAAGG+TGG 0.746630 3.2:+86118808 None:intergenic
AATTGTGCAACTGACAATGG+AGG 0.769372 3.2:+86118559 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAATATTTATAAAAAT+AGG - chr3.2:86117553-86117572 MS.gene015033:intron 0.0%
!! AAATACATAAATTTGTATTA+TGG + chr3.2:86116925-86116944 None:intergenic 10.0%
!! AAATTATAAAATAAATGACA+TGG + chr3.2:86118774-86118793 None:intergenic 10.0%
!! AGCTAATTATATTTAAATTA+AGG + chr3.2:86116259-86116278 None:intergenic 10.0%
!! ATACAAGTAATATTATAAAA+AGG - chr3.2:86118401-86118420 MS.gene015033:intron 10.0%
!! TTTATATGAATGATAATTTA+TGG + chr3.2:86116216-86116235 None:intergenic 10.0%
!! TTTATTTAGTTATTTAAATG+GGG - chr3.2:86116327-86116346 MS.gene015033:intron 10.0%
!!! AAAATTCATTTTTAAAAAAG+GGG + chr3.2:86117632-86117651 None:intergenic 10.0%
!!! AAATATTATTTTGAAAATTG+GGG + chr3.2:86116567-86116586 None:intergenic 10.0%
!!! AGAAAATTCATTTTTAAAAA+AGG + chr3.2:86117634-86117653 None:intergenic 10.0%
!!! CAAATATTATTTTGAAAATT+GGG + chr3.2:86116568-86116587 None:intergenic 10.0%
!!! CTTTATTTAGTTATTTAAAT+GGG - chr3.2:86116326-86116345 MS.gene015033:intron 10.0%
!!! GAAAATTCATTTTTAAAAAA+GGG + chr3.2:86117633-86117652 None:intergenic 10.0%
!!! TCAAATATTATTTTGAAAAT+TGG + chr3.2:86116569-86116588 None:intergenic 10.0%
!!! TCTTTATTTAGTTATTTAAA+TGG - chr3.2:86116325-86116344 MS.gene015033:intron 10.0%
!!! TTTTATATTTTGGAATTTTT+TGG - chr3.2:86117307-86117326 MS.gene015033:intron 10.0%
!! AAATATTAGTATTTAGTTGT+TGG - chr3.2:86116812-86116831 MS.gene015033:intron 15.0%
!! AACAAATATCAAAGAATAAA+CGG - chr3.2:86114595-86114614 MS.gene015033:intron 15.0%
!! AAGTGAATAAACTATTAATT+TGG + chr3.2:86118472-86118491 None:intergenic 15.0%
!! AGTGAATAAACTATTAATTT+GGG + chr3.2:86118471-86118490 None:intergenic 15.0%
!! ATTATCTATAAAATTAAGTG+TGG + chr3.2:86118071-86118090 None:intergenic 15.0%
!! ATTATCTATAAAATTTAGTG+TGG + chr3.2:86118203-86118222 None:intergenic 15.0%
!! TCACAAATTTAGTTAAATAT+GGG + chr3.2:86117602-86117621 None:intergenic 15.0%
!! TTCACAAATTTAGTTAAATA+TGG + chr3.2:86117603-86117622 None:intergenic 15.0%
!! TTGATATTGTCATTAATATT+CGG + chr3.2:86113983-86114002 None:intergenic 15.0%
!! TTTATTCTTTGATATTTGTT+GGG + chr3.2:86114595-86114614 None:intergenic 15.0%
!!! AATATTATTTTGAAAATTGG+GGG + chr3.2:86116566-86116585 None:intergenic 15.0%
!!! ACTTTTTTTTTTGTTCATTT+TGG - chr3.2:86117503-86117522 MS.gene015033:intron 15.0%
!!! ATAAAAATAGGTTGATTTAA+TGG - chr3.2:86117565-86117584 MS.gene015033:intron 15.0%
!!! ATACATATATGTCAATTTTA+TGG - chr3.2:86116676-86116695 MS.gene015033:intron 15.0%
!!! GATTTTTATTGAAATGTTTA+AGG - chr3.2:86116443-86116462 MS.gene015033:intron 15.0%
!!! TATGATTACTTTTTTTTATC+TGG - chr3.2:86116506-86116525 MS.gene015033:intron 15.0%
!!! TTTCTCCATAATTTTATTTA+GGG - chr3.2:86116179-86116198 MS.gene015033:intron 15.0%
!!! TTTTCTCCATAATTTTATTT+AGG - chr3.2:86116178-86116197 MS.gene015033:intron 15.0%
!! AAGTATAGATAATACTATGA+TGG - chr3.2:86118517-86118536 MS.gene015033:CDS 20.0%
!! ACAAATATCAAAGAATAAAC+GGG - chr3.2:86114596-86114615 MS.gene015033:intron 20.0%
!! ACAAATTTAGTTAAATATGG+GGG + chr3.2:86117600-86117619 None:intergenic 20.0%
!! ACACAAAAGTCATAATAATT+AGG + chr3.2:86114714-86114733 None:intergenic 20.0%
!! ACATAAATTTGTATTATGGA+GGG + chr3.2:86116921-86116940 None:intergenic 20.0%
!! ATCATTCATATAAAACACTT+AGG - chr3.2:86116222-86116241 MS.gene015033:intron 20.0%
!! ATTGTTGATGTTAAAAATCA+GGG + chr3.2:86115528-86115547 None:intergenic 20.0%
!! CACAAAAGTCATAATAATTA+GGG + chr3.2:86114713-86114732 None:intergenic 20.0%
!! CACAAATTTAGTTAAATATG+GGG + chr3.2:86117601-86117620 None:intergenic 20.0%
!! CTAAAATAAGTCTATAATTG+TGG + chr3.2:86116394-86116413 None:intergenic 20.0%
!! GATAAAACAGTTTAAAAGAA+TGG - chr3.2:86118423-86118442 MS.gene015033:intron 20.0%
!! GTAATAAATGTGAATATTGA+AGG - chr3.2:86117868-86117887 MS.gene015033:intron 20.0%
!! GTTTATTCTTTGATATTTGT+TGG + chr3.2:86114596-86114615 None:intergenic 20.0%
!! TAAACATTATATAAGTGAGA+GGG - chr3.2:86114779-86114798 MS.gene015033:intron 20.0%
!! TACATAAATTTGTATTATGG+AGG + chr3.2:86116922-86116941 None:intergenic 20.0%
!! TATAATGCAAATAACAATGT+TGG - chr3.2:86114241-86114260 MS.gene015033:intron 20.0%
!! TCATTCATATAAAACACTTA+GGG - chr3.2:86116223-86116242 MS.gene015033:intron 20.0%
!! TTAAACATTATATAAGTGAG+AGG - chr3.2:86114778-86114797 MS.gene015033:intron 20.0%
!! TTATGTTTGTTTAAAAGAGA+AGG + chr3.2:86115770-86115789 None:intergenic 20.0%
!!! AACAATCTTTTAAATCATGT+TGG - chr3.2:86116589-86116608 MS.gene015033:intron 20.0%
!!! ACAATCTTTTAAATCATGTT+GGG - chr3.2:86116590-86116609 MS.gene015033:intron 20.0%
!!! ATCGAGTATTCAAATATTTT+TGG + chr3.2:86115577-86115596 None:intergenic 20.0%
!!! CATAAAAATAATCGATTTTG+AGG + chr3.2:86117710-86117729 None:intergenic 20.0%
!!! GTGAATAAACTATTAATTTG+GGG + chr3.2:86118470-86118489 None:intergenic 20.0%
!!! TCATTAGGAGTTTTATATTT+TGG - chr3.2:86117297-86117316 MS.gene015033:intron 20.0%
!!! TTGTTCAGTTTTAAAAAAGA+TGG - chr3.2:86117897-86117916 MS.gene015033:intron 20.0%
! AAAAAAAAGTTACGATACCT+TGG + chr3.2:86114440-86114459 None:intergenic 25.0%
! AAATTGAAGACATTACCAAA+TGG + chr3.2:86114034-86114053 None:intergenic 25.0%
! AAGTAAATAAGTACCTTTGT+TGG + chr3.2:86117178-86117197 None:intergenic 25.0%
! ACTCTAAGTATGAAAACTAT+TGG - chr3.2:86115843-86115862 MS.gene015033:intron 25.0%
! AGAATAGCAATTTGGATTAA+TGG + chr3.2:86115912-86115931 None:intergenic 25.0%
! AGATTTGAGAAATTGGATAT+GGG + chr3.2:86113959-86113978 None:intergenic 25.0%
! ATAATAATTAGGGATGTTTG+TGG + chr3.2:86114703-86114722 None:intergenic 25.0%
! ATGGACAAAATTTCAATACT+TGG - chr3.2:86116959-86116978 MS.gene015033:intron 25.0%
! ATTGTTCATATATTGTAGTG+AGG - chr3.2:86118315-86118334 MS.gene015033:intron 25.0%
! CAAGATTTAATACCATTGTT+GGG + chr3.2:86114912-86114931 None:intergenic 25.0%
! CATTGTTGATGTTAAAAATC+AGG + chr3.2:86115529-86115548 None:intergenic 25.0%
! CTAAAAGTGATACTTTATCT+TGG - chr3.2:86117759-86117778 MS.gene015033:intron 25.0%
! CTCTAAGTATGAAAACTATT+GGG - chr3.2:86115844-86115863 MS.gene015033:intron 25.0%
! CTTAAATAAAAACCCTAAGT+CGG - chr3.2:86115815-86115834 MS.gene015033:intron 25.0%
! GCATTCCCTAAATAAAATTA+TGG + chr3.2:86116187-86116206 None:intergenic 25.0%
! GTAGTAAGCATTTATTGATA+TGG + chr3.2:86117219-86117238 None:intergenic 25.0%
! TAGATTTGAGAAATTGGATA+TGG + chr3.2:86113960-86113979 None:intergenic 25.0%
! TATTTCATTTCTATCACAGA+TGG - chr3.2:86116940-86116959 MS.gene015033:intron 25.0%
! TGGACAAAATTTCAATACTT+GGG - chr3.2:86116960-86116979 MS.gene015033:intron 25.0%
! TTGTATTAAGCCAAGTATTT+GGG + chr3.2:86115718-86115737 None:intergenic 25.0%
! TTTGTATTAAGCCAAGTATT+TGG + chr3.2:86115719-86115738 None:intergenic 25.0%
!! AACTTTTCTTTCATTTGAAC+TGG + chr3.2:86117121-86117140 None:intergenic 25.0%
!! AATAAACTATTAATTTGGGG+TGG + chr3.2:86118467-86118486 None:intergenic 25.0%
!! ATGAAAATTGTGTTGTTGAT+GGG - chr3.2:86114299-86114318 MS.gene015033:intron 25.0%
!! GGTAACAAATTACCTATTTT+GGG - chr3.2:86117816-86117835 MS.gene015033:intron 25.0%
!! GTAACAAATTACCTATTTTG+GGG - chr3.2:86117817-86117836 MS.gene015033:intron 25.0%
!! TCTTATTGTCATTCTGAAAA+AGG + chr3.2:86115644-86115663 None:intergenic 25.0%
!! TTTTCTTTTTCTTCCCTTTT+CGG + chr3.2:86114327-86114346 None:intergenic 25.0%
!!! CAAGATAAAGTATCACTTTT+AGG + chr3.2:86117761-86117780 None:intergenic 25.0%
!!! GTTTGACTTAATTACACTTT+TGG + chr3.2:86117955-86117974 None:intergenic 25.0%
!!! TAACAAATTACCTATTTTGG+GGG - chr3.2:86117818-86117837 MS.gene015033:intron 25.0%
!!! TATTAAATCTTGGTAACGAA+GGG - chr3.2:86114920-86114939 MS.gene015033:intron 25.0%
!!! TGCTTAAAAACAGAAGTATT+GGG + chr3.2:86113905-86113924 None:intergenic 25.0%
!!! TTTTTCAGAATGACAATAAG+AGG - chr3.2:86115643-86115662 MS.gene015033:CDS 25.0%
AAATAAGTACCTTTGTTGGT+TGG + chr3.2:86117174-86117193 None:intergenic 30.0%
AAGAAAATGAGGAACCTAAA+TGG + chr3.2:86113928-86113947 None:intergenic 30.0%
AATACTATGATGGTATTTGC+AGG - chr3.2:86118527-86118546 MS.gene015033:CDS 30.0%
AATGACAATATCAACATCAC+TGG - chr3.2:86113989-86114008 MS.gene015033:CDS 30.0%
AATGCAAATAACAATGTTGG+TGG - chr3.2:86114244-86114263 MS.gene015033:intron 30.0%
AATTTAGTGTGGTAGAAAAC+CGG + chr3.2:86118192-86118211 None:intergenic 30.0%
ACTCAACAACAAAACATTGT+TGG - chr3.2:86113869-86113888 MS.gene015033:intron 30.0%
AGCTATACACATAGATTGAT+AGG - chr3.2:86116275-86116294 MS.gene015033:intron 30.0%
ATGAAATAGATTTCGCTTGT+GGG - chr3.2:86115153-86115172 MS.gene015033:intron 30.0%
ATTAATGGTCATATGCCTTA+AGG + chr3.2:86115897-86115916 None:intergenic 30.0%
ATTCGGTAGATTTGAGAAAT+TGG + chr3.2:86113966-86113985 None:intergenic 30.0%
CCAACAATGGTATTAAATCT+TGG - chr3.2:86114910-86114929 MS.gene015033:intron 30.0%
CCAAGATTTAATACCATTGT+TGG + chr3.2:86114913-86114932 None:intergenic 30.0%
CGTAGGCTATTAACAATATT+CGG - chr3.2:86116738-86116757 MS.gene015033:intron 30.0%
GCTATACACATAGATTGATA+GGG - chr3.2:86116276-86116295 MS.gene015033:intron 30.0%
GGACAAAATTTCAATACTTG+GGG - chr3.2:86116961-86116980 MS.gene015033:intron 30.0%
GGCATATAAGAATAGCAATT+TGG + chr3.2:86115920-86115939 None:intergenic 30.0%
GTCTTCAATTTAGATTCCAA+AGG - chr3.2:86114043-86114062 MS.gene015033:CDS 30.0%
GTGAGTTATATGTTCTACAT+CGG - chr3.2:86114740-86114759 MS.gene015033:intron 30.0%
GTTTGTTTGCACAAAACATA+TGG + chr3.2:86118590-86118609 None:intergenic 30.0%
TAACTCAATTCAGTGAAGTA+CGG - chr3.2:86115964-86115983 MS.gene015033:intron 30.0%
TACAAGCAAGTAATTATGGA+TGG - chr3.2:86115243-86115262 MS.gene015033:intron 30.0%
TCTTAAAAACCAACCAACAA+AGG - chr3.2:86117162-86117181 MS.gene015033:intron 30.0%
TGTAACACTAAAACTAAGTG+TGG + chr3.2:86117994-86118013 None:intergenic 30.0%
TTATTTCCTAACAATGTGTC+AGG - chr3.2:86117139-86117158 MS.gene015033:intron 30.0%
TTCTTTCATTTGAACTGGAA+GGG + chr3.2:86117116-86117135 None:intergenic 30.0%
TTGTTCTCATGATCACATAT+TGG + chr3.2:86118831-86118850 None:intergenic 30.0%
TTTCTTTCATTTGAACTGGA+AGG + chr3.2:86117117-86117136 None:intergenic 30.0%
! CGTTTTTGTTCACAATTACA+AGG - chr3.2:86117396-86117415 MS.gene015033:intron 30.0%
! GATGAAAATTGTGTTGTTGA+TGG - chr3.2:86114298-86114317 MS.gene015033:intron 30.0%
! GGGTAACAAATTACCTATTT+TGG - chr3.2:86117815-86117834 MS.gene015033:intron 30.0%
! GTGAGGTTGTTCTTATTTAA+TGG - chr3.2:86118332-86118351 MS.gene015033:intron 30.0%
! GTGCTTAAAAACAGAAGTAT+TGG + chr3.2:86113906-86113925 None:intergenic 30.0%
!! ACGACTTGTGATTTTAATCT+TGG - chr3.2:86114637-86114656 MS.gene015033:intron 30.0%
!! ACTGTTTTGTTGACATCATT+AGG - chr3.2:86117282-86117301 MS.gene015033:intron 30.0%
!! GCTTAAAAACAGAAGTATTG+GGG + chr3.2:86113904-86113923 None:intergenic 30.0%
!! GTATTAAATCTTGGTAACGA+AGG - chr3.2:86114919-86114938 MS.gene015033:intron 30.0%
!!! AAATGACGGACTCAATTTTA+AGG - chr3.2:86115295-86115314 MS.gene015033:intron 30.0%
!!! AATGACGGACTCAATTTTAA+GGG - chr3.2:86115296-86115315 MS.gene015033:intron 30.0%
!!! TCTGTTTTTAAGCACCATTT+AGG - chr3.2:86113911-86113930 MS.gene015033:intron 30.0%
AAAGATGGAAATGAAGAGGT+TGG - chr3.2:86114139-86114158 MS.gene015033:intron 35.0%
AACTCAATTCAGTGAAGTAC+GGG - chr3.2:86115965-86115984 MS.gene015033:intron 35.0%
ACACTAAAACTAAGTGTGGT+TGG + chr3.2:86117990-86118009 None:intergenic 35.0%
ACCTTAAGGCAATAGGTTTA+TGG + chr3.2:86115403-86115422 None:intergenic 35.0%
ACGATACAAGTAAGTCATTG+CGG - chr3.2:86115022-86115041 MS.gene015033:intron 35.0%
AGCAATAAACCACCACTTTA+GGG - chr3.2:86117795-86117814 MS.gene015033:intron 35.0%
ATATTTCATGCCCCCAAAAT+AGG + chr3.2:86117831-86117850 None:intergenic 35.0%
ATTAACCTCGATATGGTTGA+AGG - chr3.2:86114096-86114115 MS.gene015033:intron 35.0%
ATTGTCTCATACACAAGCTA+AGG + chr3.2:86116766-86116785 None:intergenic 35.0%
CAGAACGAATCATAATCCAT+TGG + chr3.2:86116486-86116505 None:intergenic 35.0%
CCTTAAGGCAATAGGTTTAT+GGG + chr3.2:86115402-86115421 None:intergenic 35.0%
GATGAAATAGATTTCGCTTG+TGG - chr3.2:86115152-86115171 MS.gene015033:intron 35.0%
GGAAAAAGATGGAAATGAAG+AGG - chr3.2:86114135-86114154 MS.gene015033:intron 35.0%
GTATTTGCAGGTAGATGTTA+GGG - chr3.2:86118539-86118558 MS.gene015033:CDS 35.0%
GTTAATTGTGCAACTGACAA+TGG + chr3.2:86114082-86114101 None:intergenic 35.0%
GTTAGTGATGTCAAACCTTA+AGG - chr3.2:86115879-86115898 MS.gene015033:intron 35.0%
GTTGAAGGAGTTTGAGAATA+AGG - chr3.2:86114111-86114130 MS.gene015033:intron 35.0%
TAAAACAGCTTATGTTAGCC+TGG + chr3.2:86118668-86118687 None:intergenic 35.0%
TACTCACAAACCCAAATACT+TGG - chr3.2:86115705-86115724 MS.gene015033:intron 35.0%
TCTCACTTATATGGTTGTTC+TGG - chr3.2:86114849-86114868 MS.gene015033:intron 35.0%
TGAAATAGATTTCGCTTGTG+GGG - chr3.2:86115154-86115173 MS.gene015033:intron 35.0%
TTAAGACCTGACACATTGTT+AGG + chr3.2:86117148-86117167 None:intergenic 35.0%
TTATATGCCTCTGTCATCAT+TGG - chr3.2:86115931-86115950 MS.gene015033:intron 35.0%
TTCACTGAATTGAGTTACGA+GGG + chr3.2:86115961-86115980 None:intergenic 35.0%
TTCTACATCGGATAGAAAAG+TGG - chr3.2:86114752-86114771 MS.gene015033:intron 35.0%
TTGAACACTATACAAGTGAG+AGG - chr3.2:86115375-86115394 MS.gene015033:intron 35.0%
TTGCACAATTAACCTCGATA+TGG - chr3.2:86114089-86114108 MS.gene015033:CDS 35.0%
TTGTCTCATACACAAGCTAA+GGG + chr3.2:86116765-86116784 None:intergenic 35.0%
! AACCTATTGCCTTAAGGTTT+TGG - chr3.2:86115405-86115424 MS.gene015033:intron 35.0%
! AACTCAACTTGTTTGAGCTA+AGG + chr3.2:86116892-86116911 None:intergenic 35.0%
! ACCTATTGCCTTAAGGTTTT+GGG - chr3.2:86115406-86115425 MS.gene015033:intron 35.0%
! ACGATACCTTGGTAATCTTT+GGG + chr3.2:86114429-86114448 None:intergenic 35.0%
! ACTCAACTTGTTTGAGCTAA+GGG + chr3.2:86116891-86116910 None:intergenic 35.0%
! ATGAAAGAGTTTTCGCTTGA+GGG - chr3.2:86115045-86115064 MS.gene015033:intron 35.0%
! ATGACTCTCTATTGTTGTTG+TGG + chr3.2:86116005-86116024 None:intergenic 35.0%
! ATGTTTTGTGCAAACAAACC+AGG - chr3.2:86118591-86118610 MS.gene015033:CDS 35.0%
! TACGATACCTTGGTAATCTT+TGG + chr3.2:86114430-86114449 None:intergenic 35.0%
! TCAACTTTTCTATCCGATGT+GGG + chr3.2:86115353-86115372 None:intergenic 35.0%
! TGACTCTCTATTGTTGTTGT+GGG + chr3.2:86116004-86116023 None:intergenic 35.0%
!! AATTTGTTACCCTAAAGTGG+TGG + chr3.2:86117807-86117826 None:intergenic 35.0%
!! ACAAGTCGTTTGATTTGATC+TGG + chr3.2:86114626-86114645 None:intergenic 35.0%
!! GACATTACCAAATGGATTGT+TGG + chr3.2:86114026-86114045 None:intergenic 35.0%
!! GGTAATTTGTTACCCTAAAG+TGG + chr3.2:86117810-86117829 None:intergenic 35.0%
!! TATTTCCCTCATTTTTACCC+TGG + chr3.2:86114219-86114238 None:intergenic 35.0%
!! TTAGAGTAGATACCGACTTA+GGG + chr3.2:86115830-86115849 None:intergenic 35.0%
!!! CAATGTTTTGTTGTTGAGTG+TGG + chr3.2:86113868-86113887 None:intergenic 35.0%
!!! GAGTGTGGTTTTGAAGATTT+GGG + chr3.2:86113853-86113872 None:intergenic 35.0%
!!! GTACCACTCTTTTTCGATTT+GGG + chr3.2:86113795-86113814 None:intergenic 35.0%
!!! TACCACTCTTTTTCGATTTG+GGG + chr3.2:86113794-86113813 None:intergenic 35.0%
!!! TGAGTGTGGTTTTGAAGATT+TGG + chr3.2:86113854-86113873 None:intergenic 35.0%
!!! TGTACCACTCTTTTTCGATT+TGG + chr3.2:86113796-86113815 None:intergenic 35.0%
AAACTCCTTCAACCATATCG+AGG + chr3.2:86114104-86114123 None:intergenic 40.0%
AACCCCAAATCGAAAAAGAG+TGG - chr3.2:86113789-86113808 MS.gene015033:CDS 40.0%
AATACCATTGTTGGGTCACA+AGG + chr3.2:86114904-86114923 None:intergenic 40.0%
AATTGTGCAACTGACAATGG+AGG + chr3.2:86114079-86114098 None:intergenic 40.0%
ACAAGTTCTTCGATACAAGG+TGG + chr3.2:86113830-86113849 None:intergenic 40.0%
ACCATCACCAACAATCCATT+TGG - chr3.2:86114016-86114035 MS.gene015033:CDS 40.0%
ACCCAAAACCTTAAGGCAAT+AGG + chr3.2:86114813-86114832 None:intergenic 40.0%
ACCCAAAACCTTAAGGCAAT+GGG + chr3.2:86114813-86114832 None:intergenic 40.0%
ACGTGAGTCCATCAATTCAT+TGG + chr3.2:86115075-86115094 None:intergenic 40.0%
ACTCAATTCAGTGAAGTACG+GGG - chr3.2:86115966-86115985 MS.gene015033:intron 40.0%
ATAATGTGAGTTCCTGTAGG+CGG + chr3.2:86117076-86117095 None:intergenic 40.0%
ATACCATTGTTGGGTCACAA+GGG + chr3.2:86114903-86114922 None:intergenic 40.0%
CACATCGGATAGAAAAGTTG+AGG - chr3.2:86115352-86115371 MS.gene015033:intron 40.0%
CACTCTTACCCAAAACCTTA+AGG + chr3.2:86114820-86114839 None:intergenic 40.0%
CAGGGTAAAGTTGTCATTGT+TGG + chr3.2:86115510-86115529 None:intergenic 40.0%
CCAAGTGACATTGTTTCCAA+TGG - chr3.2:86116467-86116486 MS.gene015033:intron 40.0%
CCATTGGAAACAATGTCACT+TGG + chr3.2:86116470-86116489 None:intergenic 40.0%
CCCATAAACCTATTGCCTTA+AGG - chr3.2:86115399-86115418 MS.gene015033:intron 40.0%
CTTCACTGAATTGAGTTACG+AGG + chr3.2:86115962-86115981 None:intergenic 40.0%
GAAAATGTGTAAGAGGTTGC+GGG + chr3.2:86116869-86116888 None:intergenic 40.0%
GAAATAGATTTCGCTTGTGG+GGG - chr3.2:86115155-86115174 MS.gene015033:intron 40.0%
GAAGGAGTTTGAGAATAAGG+CGG - chr3.2:86114114-86114133 MS.gene015033:intron 40.0%
GAGAATAAGGCGGAAAAAGA+TGG - chr3.2:86114124-86114143 MS.gene015033:intron 40.0%
GAGCAATAAACCACCACTTT+AGG - chr3.2:86117794-86117813 MS.gene015033:intron 40.0%
GCGGTACAAGCAAGTAATTA+TGG - chr3.2:86115239-86115258 MS.gene015033:intron 40.0%
GCTAAGGGAAAATGTGTAAG+AGG + chr3.2:86116876-86116895 None:intergenic 40.0%
GGAAAATGTGTAAGAGGTTG+CGG + chr3.2:86116870-86116889 None:intergenic 40.0%
GGTATTTGCAGGTAGATGTT+AGG - chr3.2:86118538-86118557 MS.gene015033:CDS 40.0%
GTCATAATGTGAGTTCCTGT+AGG + chr3.2:86117079-86117098 None:intergenic 40.0%
TACATCGGATAGAAAAGTGG+AGG - chr3.2:86114755-86114774 MS.gene015033:intron 40.0%
TACCCAAAACCTTAAGGCAA+TGG + chr3.2:86114814-86114833 None:intergenic 40.0%
TAGATGTTAGGGTAAGGGAA+GGG - chr3.2:86118550-86118569 MS.gene015033:CDS 40.0%
TCACTGAATTGAGTTACGAG+GGG + chr3.2:86115960-86115979 None:intergenic 40.0%
TCAGGAACACTTTAGACACA+AGG + chr3.2:86114957-86114976 None:intergenic 40.0%
TCTAGATGTGTTCAAAGCTG+AGG - chr3.2:86118698-86118717 MS.gene015033:CDS 40.0%
TGCTTTCTTTGCAACGAAAC+CGG + chr3.2:86114996-86115015 None:intergenic 40.0%
TGGAGGTTGAAAAACACCTT+TGG + chr3.2:86114062-86114081 None:intergenic 40.0%
TGTTGTCCCAAAGATTACCA+AGG - chr3.2:86114420-86114439 MS.gene015033:intron 40.0%
TTTAGCAGCTCTTACTACGT+AGG - chr3.2:86116721-86116740 MS.gene015033:intron 40.0%
! CAACTTTTCTATCCGATGTG+GGG + chr3.2:86115352-86115371 None:intergenic 40.0%
! CATGACTCTAATGAGAGTGT+TGG - chr3.2:86114175-86114194 MS.gene015033:intron 40.0%
! CTCAACTTTTCTATCCGATG+TGG + chr3.2:86115354-86115373 None:intergenic 40.0%
! GATGAAAGAGTTTTCGCTTG+AGG - chr3.2:86115044-86115063 MS.gene015033:intron 40.0%
! TGAAAGAGTTTTCGCTTGAG+GGG - chr3.2:86115046-86115065 MS.gene015033:intron 40.0%
! TGCAAACAAACCAGGTGTTT+TGG - chr3.2:86118599-86118618 MS.gene015033:CDS 40.0%
! TGTCTAAAGTGTTCCTGACA+AGG - chr3.2:86114959-86114978 MS.gene015033:intron 40.0%
! TTGTTGATGGGAACCGAAAA+GGG - chr3.2:86114311-86114330 MS.gene015033:intron 40.0%
!! AAATGGATTGTTGGTGATGG+TGG + chr3.2:86114017-86114036 None:intergenic 40.0%
!! AATGAATTGATGGACTCACG+TGG - chr3.2:86115074-86115093 MS.gene015033:intron 40.0%
!! ACCAAATGGATTGTTGGTGA+TGG + chr3.2:86114020-86114039 None:intergenic 40.0%
!! CTAATGAGAGTGTTGGTGTT+GGG - chr3.2:86114182-86114201 MS.gene015033:intron 40.0%
!! CTTAGAGTAGATACCGACTT+AGG + chr3.2:86115831-86115850 None:intergenic 40.0%
!! TCTAATGAGAGTGTTGGTGT+TGG - chr3.2:86114181-86114200 MS.gene015033:intron 40.0%
!! TTGTCATTGTTGGTTCACGA+GGG + chr3.2:86115500-86115519 None:intergenic 40.0%
!!! TAAGGTTTTGGGTAAGAGTG+TGG - chr3.2:86114820-86114839 MS.gene015033:intron 40.0%
AAGAAGCGAAGGCAGAAACT+CGG - chr3.2:86114373-86114392 MS.gene015033:intron 45.0%
AGATGTTAGGGTAAGGGAAG+GGG - chr3.2:86118551-86118570 MS.gene015033:CDS 45.0%
CCTGGTGAACATTCAATCCA+AGG + chr3.2:86118650-86118669 None:intergenic 45.0%
CCTTGGATTGAATGTTCACC+AGG - chr3.2:86118647-86118666 MS.gene015033:CDS 45.0%
CTCATAAGCCCATTGCCTTA+AGG - chr3.2:86114802-86114821 MS.gene015033:intron 45.0%
GAGAAATTGGATATGGGCGA+TGG + chr3.2:86113953-86113972 None:intergenic 45.0%
GAGCACTATAATCGTCTGTC+CGG - chr3.2:86118170-86118189 MS.gene015033:intron 45.0%
GATGGAAATGAAGAGGTTGG+CGG - chr3.2:86114142-86114161 MS.gene015033:intron 45.0%
GCAGGTAGATGTTAGGGTAA+GGG - chr3.2:86118545-86118564 MS.gene015033:CDS 45.0%
GGGAACCAGGGTAAAAATGA+GGG - chr3.2:86114211-86114230 MS.gene015033:intron 45.0%
GGGACAAGTTCTTCGATACA+AGG + chr3.2:86113833-86113852 None:intergenic 45.0%
GTAGATGTTAGGGTAAGGGA+AGG - chr3.2:86118549-86118568 MS.gene015033:CDS 45.0%
GTGAGTTATATGCCCCACAT+CGG - chr3.2:86115337-86115356 MS.gene015033:intron 45.0%
TAAGCACACCAGTTTCAAGC+AGG - chr3.2:86115741-86115760 MS.gene015033:intron 45.0%
TACTCTCTTCGCAACGAAAC+CGG + chr3.2:86115213-86115232 None:intergenic 45.0%
TGCAGGTAGATGTTAGGGTA+AGG - chr3.2:86118544-86118563 MS.gene015033:CDS 45.0%
TGGCGTCTCTCTCACTTATA+TGG - chr3.2:86114840-86114859 MS.gene015033:intron 45.0%
TTTCTGCCTTCGCTTCTTCT+CGG + chr3.2:86114371-86114390 None:intergenic 45.0%
! AGCCCATTGCCTTAAGGTTT+TGG - chr3.2:86114808-86114827 MS.gene015033:intron 45.0%
! GAAAGAGTTTTCGCTTGAGG+GGG - chr3.2:86115047-86115066 MS.gene015033:intron 45.0%
! GCCCATTGCCTTAAGGTTTT+GGG - chr3.2:86114809-86114828 MS.gene015033:intron 45.0%
! GTTGTTGATGGGAACCGAAA+AGG - chr3.2:86114310-86114329 MS.gene015033:intron 45.0%
!! ACAGAAGTATTGGGGTCTGA+AGG + chr3.2:86113896-86113915 None:intergenic 45.0%
!! AGTGTTGGTGTTGGGAAGAT+GGG - chr3.2:86114190-86114209 MS.gene015033:intron 45.0%
!! ATGAAGGCATTGGATAGCCT+TGG - chr3.2:86118630-86118649 MS.gene015033:CDS 45.0%
!! GAAGGTATCCTGCTTGAAAC+TGG + chr3.2:86115752-86115771 None:intergenic 45.0%
!! GATGAATTGATGGACTCACG+TGG - chr3.2:86115183-86115202 MS.gene015033:intron 45.0%
!! GTTGTCATTGTTGGTTCACG+AGG + chr3.2:86115501-86115520 None:intergenic 45.0%
!! TCGATTTGGGGTTTCAACAC+AGG + chr3.2:86113782-86113801 None:intergenic 45.0%
!!! TGTTTTGGCGTCGACTATGA+AGG - chr3.2:86118614-86118633 MS.gene015033:CDS 45.0%
!! TATTAAAAAAAACATATAAT+TGG + chr3.2:86116790-86116809 None:intergenic 5.0%
AAGAGGTTGCGGGTTCAAAC+AGG + chr3.2:86116859-86116878 None:intergenic 50.0%
AGGGGGAGCCAATGAATTGA+TGG - chr3.2:86115064-86115083 MS.gene015033:intron 50.0%
ATAGTCGACGCCAAAACACC+TGG + chr3.2:86118612-86118631 None:intergenic 50.0%
ATGGAAGAGCTTCCCCTTGA+GGG - chr3.2:86115262-86115281 MS.gene015033:intron 50.0%
CATTGCTGCTCTCTTTGCAG+CGG + chr3.2:86115110-86115129 None:intergenic 50.0%
GATGTTAGGGTAAGGGAAGG+GGG - chr3.2:86118552-86118571 MS.gene015033:CDS 50.0%
GGCGGTGGCATAAATGATCT+AGG + chr3.2:86117058-86117077 None:intergenic 50.0%
GGGCGATGGCAAAGAAAATG+AGG + chr3.2:86113939-86113958 None:intergenic 50.0%
GGGGAACCAGGGTAAAAATG+AGG - chr3.2:86114210-86114229 MS.gene015033:intron 50.0%
GGGGATTCCAATGATGACAG+AGG + chr3.2:86115941-86115960 None:intergenic 50.0%
TCATTTATGCCACCGCCTAC+AGG - chr3.2:86117061-86117080 MS.gene015033:intron 50.0%
TCGGCGATGAGACTCTTTGA+TGG + chr3.2:86114352-86114371 None:intergenic 50.0%
TGCGAAGAGAGTAGCAACTG+CGG - chr3.2:86115220-86115239 MS.gene015033:intron 50.0%
TGGTTGCTCCACCTTGATGT+GGG - chr3.2:86115457-86115476 MS.gene015033:intron 50.0%
TGGTTGTTCTGGCCTAGATG+CGG - chr3.2:86114860-86114879 MS.gene015033:intron 50.0%
TTGAACTGGAAGGGCTGACA+TGG + chr3.2:86117107-86117126 None:intergenic 50.0%
! GTGTTCCTGACAAGGTGTTC+AGG - chr3.2:86114967-86114986 MS.gene015033:intron 50.0%
!! CATTGTTGGTTCACGAGGGA+AGG + chr3.2:86115496-86115515 None:intergenic 50.0%
!! GAGTGTTGGTGTTGGGAAGA+TGG - chr3.2:86114189-86114208 MS.gene015033:intron 50.0%
!! GTGTTGGTGTTGGGAAGATG+GGG - chr3.2:86114191-86114210 MS.gene015033:intron 50.0%
ATGTGAGTTCCTGTAGGCGG+TGG + chr3.2:86117073-86117092 None:intergenic 55.0%
ATTTCATCGTGCCCCCCTCA+AGG + chr3.2:86115279-86115298 None:intergenic 55.0%
CTGCCCTTGTGACCCAACAA+TGG - chr3.2:86114897-86114916 MS.gene015033:intron 55.0%
GATGGAAGAGCTTCCCCTTG+AGG - chr3.2:86115261-86115280 MS.gene015033:intron 55.0%
GGAAATGAAGAGGTTGGCGG+AGG - chr3.2:86114145-86114164 MS.gene015033:intron 55.0%
GTGGTTGCTCCACCTTGATG+TGG - chr3.2:86115456-86115475 MS.gene015033:intron 55.0%
GTTGGGAAGATGGGGAACCA+GGG - chr3.2:86114199-86114218 MS.gene015033:intron 55.0%
TCATCGCCGAGAAGAAGCGA+AGG - chr3.2:86114362-86114381 MS.gene015033:intron 55.0%
TGGAAGAGCTTCCCCTTGAG+GGG - chr3.2:86115263-86115282 MS.gene015033:intron 55.0%
TGGCGTCTCTCTCACTTGTG+TGG - chr3.2:86115437-86115456 MS.gene015033:intron 55.0%
TGTTGGGAAGATGGGGAACC+AGG - chr3.2:86114198-86114217 MS.gene015033:intron 55.0%
TTGCTCCACCTTGATGTGGG+TGG - chr3.2:86115460-86115479 MS.gene015033:intron 55.0%
TTTCATCGTGCCCCCCTCAA+GGG + chr3.2:86115278-86115297 None:intergenic 55.0%
! AGGGGGGCACGATGAAATGA+CGG - chr3.2:86115281-86115300 MS.gene015033:intron 55.0%
! GATGGACTCACGTGGATGAC+CGG - chr3.2:86115082-86115101 MS.gene015033:intron 55.0%
! GATGGACTCACGTGGATGAC+TGG - chr3.2:86115082-86115101 MS.gene015033:intron 55.0%
! GGGGGAGCACGATGAATTGA+TGG - chr3.2:86115173-86115192 MS.gene015033:intron 55.0%
! TGACAAGGTGTTCAGGTCGC+CGG - chr3.2:86114974-86114993 MS.gene015033:intron 55.0%
!! GGCGTCGACTATGAAGGCAT+TGG - chr3.2:86118620-86118639 MS.gene015033:CDS 55.0%
CCAGTGGACCACCCACATCA+AGG + chr3.2:86115471-86115490 None:intergenic 60.0%
CCTTGATGTGGGTGGTCCAC+TGG - chr3.2:86115468-86115487 MS.gene015033:intron 60.0%
GAAGAGCTTCCCCTTGAGGG+GGG - chr3.2:86115265-86115284 MS.gene015033:intron 60.0%
GGAAGAGCTTCCCCTTGAGG+GGG - chr3.2:86115264-86115283 MS.gene015033:intron 60.0%
GGCGACCTGAACACCTTGTC+AGG + chr3.2:86114975-86114994 None:intergenic 60.0%
GTGGACCACCCACATCAAGG+TGG + chr3.2:86115468-86115487 None:intergenic 60.0%
TTCACGAGGGAAGGAGCCAG+TGG + chr3.2:86115487-86115506 None:intergenic 60.0%
TTCATCGTGCCCCCCTCAAG+GGG + chr3.2:86115277-86115296 None:intergenic 60.0%
TTGGGTCACAAGGGCAGCCT+GGG + chr3.2:86114894-86114913 None:intergenic 60.0%
GTTGGGTCACAAGGGCAGCC+TGG + chr3.2:86114895-86114914 None:intergenic 65.0%
TAGATGCGGACGATCCCCCC+AGG - chr3.2:86114874-86114893 MS.gene015033:intron 65.0%
TGGGGGGATCGTCCGCATCT+AGG + chr3.2:86114875-86114894 None:intergenic 65.0%
TGGGTCACAAGGGCAGCCTG+GGG + chr3.2:86114893-86114912 None:intergenic 65.0%
GGGTCACAAGGGCAGCCTGG+GGG + chr3.2:86114892-86114911 None:intergenic 70.0%
GGTCACAAGGGCAGCCTGGG+GGG + chr3.2:86114891-86114910 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 86113761 86118896 86113761 ID=MS.gene015033
chr3.2 mRNA 86113761 86118896 86113761 ID=MS.gene015033.t1;Parent=MS.gene015033
chr3.2 exon 86118437 86118896 86118437 ID=MS.gene015033.t1.exon1;Parent=MS.gene015033.t1
chr3.2 CDS 86118437 86118896 86118437 ID=cds.MS.gene015033.t1;Parent=MS.gene015033.t1
chr3.2 exon 86118216 86118325 86118216 ID=MS.gene015033.t1.exon2;Parent=MS.gene015033.t1
chr3.2 CDS 86118216 86118325 86118216 ID=cds.MS.gene015033.t1;Parent=MS.gene015033.t1
chr3.2 exon 86115474 86115698 86115474 ID=MS.gene015033.t1.exon3;Parent=MS.gene015033.t1
chr3.2 CDS 86115474 86115698 86115474 ID=cds.MS.gene015033.t1;Parent=MS.gene015033.t1
chr3.2 exon 86113938 86114108 86113938 ID=MS.gene015033.t1.exon4;Parent=MS.gene015033.t1
chr3.2 CDS 86113938 86114108 86113938 ID=cds.MS.gene015033.t1;Parent=MS.gene015033.t1
chr3.2 exon 86113761 86113832 86113761 ID=MS.gene015033.t1.exon5;Parent=MS.gene015033.t1
chr3.2 CDS 86113761 86113832 86113761 ID=cds.MS.gene015033.t1;Parent=MS.gene015033.t1
Gene Sequence

>MS.gene015033

ATGGAGAGAGATATGCTACCTGTGTTGAAACCCCAAATCGAAAAAGAGTGGTACATGAATAATATACCACCTTGTATCGAAGAACTTGTCCCAAATCTTCAAAACCACACTCAACAACAAAACATTGTTGGTCCTTCAGACCCCAATACTTCTGTTTTTAAGCACCATTTAGGTTCCTCATTTTCTTTGCCATCGCCCATATCCAATTTCTCAAATCTACCGAATATTAATGACAATATCAACATCACTGGCACCACCATCACCAACAATCCATTTGGTAATGTCTTCAATTTAGATTCCAAAGGTGTTTTTCAACCTCCATTGTCAGTTGCACAATTAACCTCGATATGGTTGAAGGAGTTTGAGAATAAGGCGGAAAAAGATGGAAATGAAGAGGTTGGCGGAGGATCGAATCATGACTCTAATGAGAGTGTTGGTGTTGGGAAGATGGGGAACCAGGGTAAAAATGAGGGAAATAATTATAATGCAAATAACAATGTTGGTGGTAGCAATAATAACATCATAGATAATAATGATGATGAAAATTGTGTTGTTGATGGGAACCGAAAAGGGAAGAAAAAGAAAACTCCATCAAAGAGTCTCATCGCCGAGAAGAAGCGAAGGCAGAAACTCGGTGATAATATGCACAAGCTTCGTTCTGTTGTCCCAAAGATTACCAAGGTATCGTAACTTTTTTTTATCGTTCTTACTAGCGTCTTTCTGCTTTTTTGTTGCAATAACGCGTGTAAATTGTGAACAGTATTTTATATAATATTTTGATTTTGATTTCAATTATAAGTATAAATATTTGTGACTTTAAAATTATAAAAACCCAACAAATATCAAAGAATAAACGGGTCTTCCAGATCAAATCAAACGACTTGTGATTTTAATCTTGGAATTTGATAGTTTTTTGTCTCAAAGCTGAGCTAAATCATACCACAAACATCCCTAATTATTATGACTTTTGTGTGCAAGTGTGAGTTATATGTTCTACATCGGATAGAAAAGTGGAGGTTAAACATTATATAAGTGAGAGGGCTCATAAGCCCATTGCCTTAAGGTTTTGGGTAAGAGTGTGGCGTCTCTCTCACTTATATGGTTGTTCTGGCCTAGATGCGGACGATCCCCCCAGGCTGCCCTTGTGACCCAACAATGGTATTAAATCTTGGTAACGAAGGGTATGACAAACTCCTTGTGTCTAAAGTGTTCCTGACAAGGTGTTCAGGTCGCCGGTTTCGTTGCAAAGAAAGCAGCAACGACGATACAAGTAAGTCATTGCGGATGAAAGAGTTTTCGCTTGAGGGGGAGCCAATGAATTGATGGACTCACGTGGATGACTGGTTCCGCTGCAAAGAGAGCAGCAATGTCGATACAAATAAGTCATTGCAGATGAAATAGATTTCGCTTGTGGGGGAGCACGATGAATTGATGGACTCACGTGGATGACCGGTTTCGTTGCGAAGAGAGTAGCAACTGCGGTACAAGCAAGTAATTATGGATGGAAGAGCTTCCCCTTGAGGGGGGCACGATGAAATGACGGACTCAATTTTAAGGGCGAGTGTTGTGTGCAAGTGTGAGTTATATGCCCCACATCGGATAGAAAAGTTGAGGTTGAACACTATACAAGTGAGAGGACCCATAAACCTATTGCCTTAAGGTTTTGGGTAAGAGTGTGGCGTCTCTCTCACTTGTGTGGTTGCTCCACCTTGATGTGGGTGGTCCACTGGCTCCTTCCCTCGTGAACCAACAATGACAACTTTACCCTGATTTTTAACATCAACAATGTATTTTTATTATTCTTTAAAACAATCCAAAAATATTTGAATACTCGATCATGAGTGTCTTTCATAATATTAGAGTGAAATTTATTTCAAAAACCTTTTTCAGAATGACAATAAGAGGCATGTCATATTTTTTAAAACAAAGTCACAACACATTATATACTCACAAACCCAAATACTTGGCTTAATACAAATGTAAGCACACCAGTTTCAAGCAGGATACCTTCTCTTTTAAACAAACATAAACTCAAAAATAAAAGAGATATAAAACTTAAATAAAAACCCTAAGTCGGTATCTACTCTAAGTATGAAAACTATTGGGTACTAAAAACTCGTTAGTGATGTCAAACCTTAAGGCATATGACCATTAATCCAAATTGCTATTCTTATATGCCTCTGTCATCATTGGAATCCCCTCGTAACTCAATTCAGTGAAGTACGGGGTATTAAGCTCAACCCACAACAACAATAGAGAGTCATAATATAAATAAACACATATACATAATATAAAAAGCAAACACACATAGCATGCAAAAAATATAAAGCATAATAGCTAGCATGTTCATAACATAACACAGATTAAGACAATGTAAACACGATTGTAATGCAATGTCTATATGTAAGTGCATATCGTTTTCTCCATAATTTTATTTAGGGAATGCTTTTCTCCATAAATTATCATTCATATAAAACACTTAGGGAAAGAATTCTCCTTAATTTAAATATAATTAGCTATACACATAGATTGATAGGGAACACATAGTAAATCAACTACTAAAATCTTTATTTAGTTATTTAAATGGGGAATACAACAACTGTGAAAAGATAAAAACTATGATGTCATAACCACAATTATAGACTTATTTTAGAAAAATGATAACAATGCTAACAATTTAGTGATTTTTATTGAAATGTTTAAGGACCAAGTGACATTGTTTCCAATGGATTATGATTCGTTCTGTATGATTACTTTTTTTTATCTGGAAAAATAATAACTTATTCATCTTTTGCTTCTCTACCCCCAATTTTCAAAATAATATTTGAAACAATCTTTTAAATCATGTTGGGTATTAATATAATGTGAAATGAAACAAACATCTATGATTGAAGAACATGATTTTTGTTTTATTTATACATATATGTCAATTTTATGGCTTTAAAATTTAACACGTGTTTTTTAGCAGCTCTTACTACGTAGGCTATTAACAATATTCGGTCCCTTAGCTTGTGTATGAGACAATGCCAATTATATGTTTTTTTTAATAGCAAATATTAGTATTTAGTTGTTGGACTGATATTTACTCTTTCACTCCTGTTTGAACCCGCAACCTCTTACACATTTTCCCTTAGCTCAAACAAGTTGAGTTATGCAACCCTCCATAATACAAATTTATGTATTTCATTTCTATCACAGATGGACAAAATTTCAATACTTGGGGATGCTGTTAACTACTTGAATGAGTTAAAAGAACAAATTAATGATCTTCAAAGTGAGATAGCGTCAAGCTCTCCTAGATCATTTATGCCACCGCCTACAGGAACTCACATTATGACATCTACCATGTCAGCCCTTCCAGTTCAAATGAAAGAAAAGTTATTTCCTAACAATGTGTCAGGTCTTAAAAACCAACCAACAAAGGTACTTATTTACTTTAATAGAAAGTTCTTATTCCATATCAATAAATGCTTACTACACTCAAGATATACATTTATATGTAAAATGAAGACATTTCATTCACTGTTTTGTTGACATCATTAGGAGTTTTATATTTTGGAATTTTTTGGTGCATTTTGTGCAAAATATTACACACACACACACACACACACACACACACACGAGAATTGTATTTGCGTTTTTGTTCACAATTACAAGGTGTAATATAACTCACTAAAAAATCTAAAAGATTTGACAATGCATGCATTTGATAACTATAATTGAAAACTGAAGCATGTTTGAAACTTTTTTTTTTGTTCATTTTGGATACTTTCACTTGATATTTAAATTCAATAAAAAATATTTATAAAAATAGGTTGATTTAATGGTACTGTTGACCCCCATATTTAACTAAATTTGTGAAATCATTCCCCTTTTTTAAAAATGAATTTTCTAGTTCTTCTATTTTCACGTTTGTTGTAGTTTTTGTCTAAATTCATATTTGTTGCCTCAAAATCGATTATTTTTATGCAAAAAGAAAAAAGAAAAAAATTTTACTCCTAAAAGTGATACTTTATCTTGGAATTTAACATTTGAGCAATAAACCACCACTTTAGGGTAACAAATTACCTATTTTGGGGGCATGAAATATATGTTGAGACTAAAATTGTAATAAATGTGAATATTGAAGGACTAGATTGTTCAGTTTTAAAAAAGATGGACTAGTTTTGTGAATTTGATTAAATAGAGAAACCAAAAGTGTAATTAAGTCAAACATTATGTCAATGCCAACCACACTTAGTTTTAGTGTTACAAATATTAGCTAGCAAAAAGATGAGCACTAACATAATCGCCTGTCCGGTTTTCTACCACACTTAATTTTATAGATAATTTGATATGTATAATGATCAATATTTTTTGAGCCAACCACACTTAGTTTTAGTGTTACAAATATTAGCTAGCAAAAAGATGAGCACTATAATCGTCTGTCCGGTTTTCTACCACACTAAATTTTATAGATAATTTGATATGTATAATGATCAATATTTTTTGAGAAAAAATGATTAGATATTATAAAAATAAGATTGAAATAAGCTTTTTTTTATAGTATTAAATATTGTTCATATATTGTAGTGAGGTTGTTCTTATTTAATGGTATTCAACTATTGTTTAAAAAAAATTGACAATTTTTTAAATTAACGATACAAGTAATATTATAAAAAGGATAAAACAGTTTAAAAGAATGGTAAAAATGAAAGAAAAAACCACCCCAAATTAATAGTTTATTCACTTTATATATAGTATAAAACAAATATACAAGTATAGATAATACTATGATGGTATTTGCAGGTAGATGTTAGGGTAAGGGAAGGGGGAATTGTCAACATCCATATGTTTTGTGCAAACAAACCAGGTGTTTTGGCGTCGACTATGAAGGCATTGGATAGCCTTGGATTGAATGTTCACCAGGCTAACATAAGCTGTTTTAATGATTTTTCTCTAGATGTGTTCAAAGCTGAGGTATACATTTATTTTTCAATACTATACTTTATAAAATTTCTTATTCGATTACCATGTCATTTATTTTATAATTTTCATTAATTATTCTTTCAAAATTTATTTTAGATGCCAATATGTGATCATGAGAACAATGTAATGAATGTTGTACGATCTATCTATGCTTGCTTGACTTTTTAA
Protein sequence

>MS.gene015033.t1

MERDMLPVLKPQIEKEWYMNNIPPCIEELVPNLQNHTQQQNIVGPSDPNTSVFKHHLGSSFSLPSPISNFSNLPNINDNINITGTTITNNPFGNVFNLDSKGVFQPPLSVAQLTSIWLKEFENKAEKDGNEEVGGGSNHDSNESVGVGKMGNQGKKKKTPSKSLIAEKKRRQKLGDNMHKLRSVVPKITKMDKISILGDAVNYLNELKEQINDLQSEIASSSPRSFMPPPTGTHIMTSTMSALPVQMKEKLFPNNVSGLKNQPTKVDVRVREGGIVNIHMFCANKPGVLASTMKALDSLGLNVHQANISCFNDFSLDVFKAEMPICDHENNVMNVVRSIYACLTF