Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene015079.t1 | XP_013461785.1 | 92.3 | 843 | 64 | 1 | 1 | 842 | 1 | 843 | 9.1e-309 | 1069.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene015079.t1 | F4IXE7 | 31.8 | 424 | 269 | 7 | 424 | 839 | 620 | 1031 | 1.4e-60 | 236.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene015079.t1 | A0A072VCE4 | 92.3 | 843 | 64 | 1 | 1 | 842 | 1 | 843 | 6.5e-309 | 1069.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene015079.t1 | TR | PHD |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene015079.t1 | MTR_3g103120 | 95.374 | 843 | 38 | 1 | 1 | 842 | 1 | 843 | 0.0 | 1600 |
MS.gene015079.t1 | MTR_7g109640 | 59.482 | 733 | 193 | 7 | 185 | 840 | 91 | 796 | 0.0 | 827 |
MS.gene015079.t1 | MTR_7g109640 | 62.948 | 251 | 76 | 2 | 1 | 235 | 1 | 250 | 4.87e-82 | 280 |
MS.gene015079.t1 | MTR_3g103110 | 58.322 | 715 | 179 | 7 | 234 | 840 | 97 | 800 | 0.0 | 743 |
MS.gene015079.t1 | MTR_3g103110 | 72.851 | 221 | 51 | 4 | 1 | 220 | 1 | 213 | 1.36e-85 | 290 |
MS.gene015079.t1 | MTR_5g024390 | 67.654 | 439 | 108 | 3 | 424 | 840 | 2 | 428 | 0.0 | 622 |
MS.gene015079.t1 | MTR_5g024500 | 66.970 | 439 | 111 | 3 | 424 | 840 | 2 | 428 | 0.0 | 614 |
MS.gene015079.t1 | MTR_5g071340 | 41.443 | 485 | 259 | 9 | 358 | 833 | 618 | 1086 | 3.41e-109 | 361 |
MS.gene015079.t1 | MTR_3g464550 | 42.548 | 416 | 222 | 8 | 424 | 831 | 602 | 1008 | 5.40e-101 | 338 |
MS.gene015079.t1 | MTR_3g103160 | 40.816 | 539 | 199 | 14 | 313 | 833 | 2 | 438 | 8.86e-88 | 286 |
MS.gene015079.t1 | MTR_2g078040 | 36.117 | 443 | 260 | 9 | 403 | 835 | 741 | 1170 | 1.88e-75 | 268 |
MS.gene015079.t1 | MTR_1g103830 | 32.809 | 509 | 299 | 10 | 357 | 831 | 513 | 1012 | 3.33e-70 | 253 |
MS.gene015079.t1 | MTR_1g072130 | 34.043 | 423 | 259 | 7 | 422 | 833 | 809 | 1222 | 5.63e-69 | 249 |
MS.gene015079.t1 | MTR_7g095140 | 31.056 | 322 | 200 | 4 | 518 | 837 | 6 | 307 | 1.40e-49 | 179 |
MS.gene015079.t1 | MTR_1g068930 | 27.296 | 392 | 223 | 11 | 458 | 806 | 458 | 830 | 1.90e-39 | 157 |
MS.gene015079.t1 | MTR_1g068930 | 27.296 | 392 | 223 | 11 | 458 | 806 | 495 | 867 | 2.02e-39 | 157 |
MS.gene015079.t1 | MTR_7g102610 | 26.712 | 438 | 231 | 13 | 459 | 829 | 531 | 945 | 1.69e-37 | 152 |
MS.gene015079.t1 | MTR_4g099530 | 24.528 | 424 | 269 | 11 | 424 | 831 | 110 | 498 | 7.42e-34 | 137 |
MS.gene015079.t1 | MTR_1g062330 | 25.400 | 437 | 246 | 12 | 459 | 833 | 386 | 804 | 9.02e-33 | 136 |
MS.gene015079.t1 | MTR_4g050090 | 24.439 | 446 | 240 | 14 | 459 | 834 | 226 | 644 | 1.01e-28 | 124 |
MS.gene015079.t1 | MTR_4g056990 | 24.792 | 480 | 270 | 15 | 394 | 813 | 152 | 600 | 5.39e-28 | 120 |
MS.gene015079.t1 | MTR_4g057290 | 25.060 | 415 | 233 | 12 | 459 | 813 | 126 | 522 | 2.01e-26 | 115 |
MS.gene015079.t1 | MTR_6g061000 | 56.410 | 78 | 23 | 1 | 511 | 577 | 24 | 101 | 1.02e-21 | 90.9 |
MS.gene015079.t1 | MTR_2g084425 | 27.350 | 234 | 143 | 6 | 608 | 840 | 818 | 1025 | 3.13e-18 | 90.5 |
MS.gene015079.t1 | MTR_2g084425 | 28.049 | 246 | 154 | 6 | 331 | 568 | 365 | 595 | 5.58e-12 | 70.1 |
MS.gene015079.t1 | MTR_2g084425 | 29.570 | 186 | 118 | 4 | 385 | 568 | 421 | 595 | 8.28e-12 | 69.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene015079.t1 | AT5G58610 | 40.964 | 415 | 238 | 5 | 424 | 833 | 367 | 779 | 3.76e-99 | 328 |
MS.gene015079.t1 | AT5G58610 | 40.964 | 415 | 238 | 5 | 424 | 833 | 598 | 1010 | 4.12e-97 | 326 |
MS.gene015079.t1 | AT5G58610 | 40.964 | 415 | 238 | 5 | 424 | 833 | 598 | 1010 | 4.12e-97 | 326 |
MS.gene015079.t1 | AT5G58610 | 40.964 | 415 | 238 | 5 | 424 | 833 | 598 | 1010 | 6.31e-97 | 327 |
MS.gene015079.t1 | AT5G58610 | 40.964 | 415 | 238 | 5 | 424 | 833 | 589 | 1001 | 1.40e-96 | 326 |
MS.gene015079.t1 | AT5G58610 | 40.964 | 415 | 238 | 5 | 424 | 833 | 589 | 1001 | 2.10e-96 | 325 |
MS.gene015079.t1 | AT5G58610 | 38.741 | 413 | 224 | 5 | 424 | 833 | 589 | 975 | 6.71e-87 | 298 |
MS.gene015079.t1 | AT5G58610 | 38.741 | 413 | 224 | 5 | 424 | 833 | 589 | 975 | 6.95e-87 | 299 |
MS.gene015079.t1 | AT5G58610 | 40.443 | 361 | 208 | 5 | 424 | 779 | 598 | 956 | 2.12e-80 | 279 |
MS.gene015079.t1 | AT5G58610 | 40.443 | 361 | 208 | 5 | 424 | 779 | 589 | 947 | 6.19e-80 | 277 |
MS.gene015079.t1 | AT5G36740 | 32.936 | 419 | 269 | 5 | 422 | 835 | 542 | 953 | 4.09e-70 | 252 |
MS.gene015079.t1 | AT5G36740 | 32.936 | 419 | 269 | 5 | 422 | 835 | 542 | 953 | 4.09e-70 | 252 |
MS.gene015079.t1 | AT1G05380 | 33.252 | 412 | 266 | 4 | 424 | 831 | 519 | 925 | 8.62e-70 | 251 |
MS.gene015079.t1 | AT1G05380 | 33.252 | 412 | 266 | 4 | 424 | 831 | 519 | 925 | 8.62e-70 | 251 |
MS.gene015079.t1 | AT1G05380 | 33.252 | 412 | 266 | 4 | 424 | 831 | 519 | 925 | 8.62e-70 | 251 |
MS.gene015079.t1 | AT5G36740 | 32.168 | 429 | 269 | 6 | 422 | 835 | 389 | 810 | 4.01e-67 | 242 |
MS.gene015079.t1 | AT3G14980 | 31.840 | 424 | 269 | 7 | 424 | 839 | 575 | 986 | 1.27e-65 | 239 |
MS.gene015079.t1 | AT5G58610 | 39.009 | 323 | 190 | 5 | 424 | 741 | 589 | 909 | 1.39e-65 | 236 |
MS.gene015079.t1 | AT3G14980 | 31.840 | 424 | 269 | 7 | 424 | 839 | 620 | 1031 | 1.65e-65 | 238 |
MS.gene015079.t1 | AT3G14980 | 31.840 | 424 | 269 | 7 | 424 | 839 | 620 | 1031 | 1.65e-65 | 238 |
MS.gene015079.t1 | AT3G14980 | 31.840 | 424 | 269 | 7 | 424 | 839 | 620 | 1031 | 1.65e-65 | 238 |
MS.gene015079.t1 | AT3G14980 | 31.840 | 424 | 269 | 7 | 424 | 839 | 620 | 1031 | 2.93e-65 | 237 |
MS.gene015079.t1 | AT5G36670 | 31.034 | 435 | 270 | 7 | 422 | 835 | 542 | 967 | 7.80e-62 | 228 |
MS.gene015079.t1 | AT5G36670 | 31.034 | 435 | 270 | 7 | 422 | 835 | 542 | 967 | 7.80e-62 | 228 |
MS.gene015079.t1 | AT4G14920 | 30.824 | 425 | 281 | 5 | 421 | 840 | 576 | 992 | 5.11e-60 | 222 |
MS.gene015079.t1 | AT4G14920 | 30.824 | 425 | 281 | 5 | 421 | 840 | 576 | 992 | 5.64e-60 | 222 |
MS.gene015079.t1 | AT4G14920 | 30.824 | 425 | 281 | 5 | 421 | 840 | 576 | 992 | 5.64e-60 | 222 |
MS.gene015079.t1 | AT5G36740 | 33.053 | 357 | 227 | 5 | 422 | 773 | 542 | 891 | 1.66e-59 | 219 |
MS.gene015079.t1 | AT5G36740 | 33.053 | 357 | 227 | 5 | 422 | 773 | 542 | 891 | 1.66e-59 | 219 |
MS.gene015079.t1 | AT5G36670 | 33.053 | 357 | 227 | 5 | 422 | 773 | 542 | 891 | 1.66e-59 | 219 |
MS.gene015079.t1 | AT5G36670 | 30.337 | 445 | 270 | 8 | 422 | 835 | 389 | 824 | 8.95e-59 | 218 |
MS.gene015079.t1 | AT5G36670 | 30.337 | 445 | 270 | 8 | 422 | 835 | 542 | 977 | 2.16e-58 | 217 |
MS.gene015079.t1 | AT5G63900 | 34.111 | 343 | 191 | 11 | 503 | 835 | 227 | 544 | 2.41e-53 | 195 |
MS.gene015079.t1 | AT3G14980 | 31.498 | 327 | 204 | 7 | 424 | 742 | 620 | 934 | 3.45e-45 | 176 |
MS.gene015079.t1 | AT2G37520 | 27.356 | 435 | 229 | 13 | 459 | 833 | 410 | 817 | 4.46e-41 | 162 |
MS.gene015079.t1 | AT3G53680 | 29.648 | 398 | 211 | 14 | 459 | 806 | 427 | 805 | 1.08e-38 | 155 |
MS.gene015079.t1 | AT3G53680 | 29.648 | 398 | 211 | 14 | 459 | 806 | 429 | 807 | 1.20e-38 | 155 |
MS.gene015079.t1 | AT2G36720 | 25.917 | 436 | 241 | 10 | 459 | 831 | 557 | 973 | 9.91e-38 | 152 |
MS.gene015079.t1 | AT2G36720 | 25.917 | 436 | 241 | 10 | 459 | 831 | 557 | 973 | 9.91e-38 | 152 |
MS.gene015079.t1 | AT2G27980 | 26.230 | 488 | 262 | 13 | 420 | 834 | 598 | 1060 | 8.81e-36 | 147 |
Find 138 sgRNAs with CRISPR-Local
Find 162 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTCACTCTCGCTGGATTTA+AGG | 0.128168 | 3.2:+85522291 | MS.gene015079:CDS |
AAAACAACATCTTCTTTCTT+TGG | 0.186886 | 3.2:+85521025 | MS.gene015079:CDS |
TATTACTTTCTTAGAATTTC+AGG | 0.193107 | 3.2:+85523332 | MS.gene015079:CDS |
CACCATTCTCTTACAGCTTC+TGG | 0.208379 | 3.2:-85520939 | None:intergenic |
GTTTGTTCTATTTGTGGTTT+TGG | 0.227006 | 3.2:+85522469 | MS.gene015079:CDS |
CCAACAATTGATGCTTTATC+TGG | 0.227211 | 3.2:+85522964 | MS.gene015079:CDS |
TTGTCCTCGATGTTCTTTCT+TGG | 0.259390 | 3.2:-85523151 | None:intergenic |
TGGTTTCTATAATGTGATTT+TGG | 0.261940 | 3.2:+85523050 | MS.gene015079:CDS |
GTGGCTACCATAAGGATTTA+TGG | 0.283165 | 3.2:+85523096 | MS.gene015079:CDS |
CACGCAGTGTAAGGCCATTT+AGG | 0.288596 | 3.2:-85523387 | None:intergenic |
TTTCTTTGGGTTGGAAGCTT+TGG | 0.293261 | 3.2:+85521039 | MS.gene015079:CDS |
ATCATCCACTAGTATCTTCT+TGG | 0.299268 | 3.2:+85522339 | MS.gene015079:CDS |
AAACAACATCTTCTTTCTTT+GGG | 0.299298 | 3.2:+85521026 | MS.gene015079:CDS |
ATTATTGTTGCTGCTGTTAC+TGG | 0.303084 | 3.2:-85521200 | None:intergenic |
GATTAAATAGAGAAGGTATA+AGG | 0.305895 | 3.2:+85522125 | MS.gene015079:CDS |
AGATTATCCGCAACCTTAAC+TGG | 0.315691 | 3.2:-85522817 | None:intergenic |
GTTGATAAAGAATAAAGTTT+TGG | 0.317891 | 3.2:+85522171 | MS.gene015079:CDS |
AAAGGTATTCACTTGTTTCT+TGG | 0.322354 | 3.2:+85522149 | MS.gene015079:CDS |
GTACATTCTTGTTTACGTTT+AGG | 0.328883 | 3.2:-85522613 | None:intergenic |
AACCACTGAAGAAACCTAAA+TGG | 0.332081 | 3.2:+85523373 | MS.gene015079:CDS |
TCAGGCACTATGTTCATATC+AGG | 0.336590 | 3.2:-85520909 | None:intergenic |
AGAGAATGGTGCCGCTTAAC+AGG | 0.346625 | 3.2:+85520951 | MS.gene015079:CDS |
GAAAATGGAGGAAGTGATTT+CGG | 0.358446 | 3.2:+85523074 | MS.gene015079:CDS |
GATACTGTTTGTTCTATTTG+TGG | 0.359159 | 3.2:+85522463 | MS.gene015079:CDS |
GACACATGGACAAAATCTTT+TGG | 0.362557 | 3.2:+85523267 | MS.gene015079:CDS |
GCAATATAGTTTGCGCGAAC+AGG | 0.368324 | 3.2:+85522764 | MS.gene015079:CDS |
GGTTTCTCTTTCAACTGTAA+TGG | 0.368815 | 3.2:-85521698 | None:intergenic |
GTGAGCAGAAATTTCACTTT+GGG | 0.378660 | 3.2:+85522674 | MS.gene015079:CDS |
TTTAGATCTTGATCGAGTTC+CGG | 0.381635 | 3.2:+85522543 | MS.gene015079:CDS |
GTTACTGGTGCTGCAGTTGA+AGG | 0.385036 | 3.2:-85521185 | None:intergenic |
ATCGAGTTCCGGATGGTGAT+TGG | 0.385313 | 3.2:+85522554 | MS.gene015079:CDS |
TAGGTTTCTTCAGTGGTTTA+AGG | 0.387281 | 3.2:-85523368 | None:intergenic |
TGCTATTGCTGCTGCTTCCT+CGG | 0.398745 | 3.2:-85521927 | None:intergenic |
AACATCTTCTTTCTTTGGGT+TGG | 0.401046 | 3.2:+85521030 | MS.gene015079:CDS |
CCAGATAAAGCATCAATTGT+TGG | 0.408789 | 3.2:-85522964 | None:intergenic |
TGACAACAACATCAATATAT+TGG | 0.418067 | 3.2:+85521408 | MS.gene015079:CDS |
ATTAAATAGAGAAGGTATAA+GGG | 0.424847 | 3.2:+85522126 | MS.gene015079:CDS |
GGTTGCACTTTCAGCTGTAA+TGG | 0.426195 | 3.2:-85521566 | None:intergenic |
AGTCGCTCAATCGACTGAAA+TGG | 0.435511 | 3.2:-85521632 | None:intergenic |
CTTTGAATTGACTTCTAATG+AGG | 0.442824 | 3.2:+85521964 | MS.gene015079:CDS |
TAAACCGGAAGTTACTAATT+CGG | 0.448302 | 3.2:+85522078 | MS.gene015079:CDS |
TTTGGGTGTGTAAAGGCAAC+AGG | 0.448561 | 3.2:+85522691 | MS.gene015079:CDS |
ATTTGCTTCATAGTTTGCTT+CGG | 0.452884 | 3.2:-85522437 | None:intergenic |
ACTGATACCTCGGATTCCTT+CGG | 0.453162 | 3.2:-85521587 | None:intergenic |
AACAAGAATACTGTTATCAT+TGG | 0.453522 | 3.2:-85522641 | None:intergenic |
CAAAGAAAGTGCTGGTAGAA+AGG | 0.455867 | 3.2:+85520986 | MS.gene015079:CDS |
TGTTGTTGTCACTTCTTCCT+CGG | 0.457876 | 3.2:-85521396 | None:intergenic |
AGGAATGTGTCGTTTGTTGA+TGG | 0.460065 | 3.2:+85523173 | MS.gene015079:CDS |
AACTACAGCCACGCAGTGTA+AGG | 0.462994 | 3.2:-85523396 | None:intergenic |
GCTATTGTGGAAACCAGTTA+AGG | 0.464746 | 3.2:+85522804 | MS.gene015079:CDS |
ACTAGTATCTTCTTGGAAGA+TGG | 0.470828 | 3.2:+85522346 | MS.gene015079:CDS |
GCATGTGATTCAATCTAAAC+CGG | 0.473942 | 3.2:+85522063 | MS.gene015079:CDS |
TACTACATTATCAACATCAA+TGG | 0.474099 | 3.2:+85522030 | MS.gene015079:CDS |
GTTATACTTCTCCTAACAAT+GGG | 0.474735 | 3.2:+85521093 | MS.gene015079:CDS |
TGATTTCGGTGGCTACCATA+AGG | 0.474912 | 3.2:+85523088 | MS.gene015079:CDS |
CTTGTGACCATAAATCCTTA+TGG | 0.478256 | 3.2:-85523103 | None:intergenic |
TTCTTCAATGCAACTCTCGC+AGG | 0.478869 | 3.2:-85521141 | None:intergenic |
CCCACCGAATTAGTAACTTC+CGG | 0.484863 | 3.2:-85522082 | None:intergenic |
GCTGCTTCCTCGGATTCACT+TGG | 0.486702 | 3.2:-85521917 | None:intergenic |
CTGCAGTTGAAGGGTGTTTG+AGG | 0.486894 | 3.2:-85521175 | None:intergenic |
TGCTCTAGCTACTGCTTCCT+CGG | 0.490289 | 3.2:-85521264 | None:intergenic |
TCCTCTTGCTACTGATACCT+CGG | 0.491108 | 3.2:-85521597 | None:intergenic |
ATTTCACTTTGGGTGTGTAA+AGG | 0.492058 | 3.2:+85522684 | MS.gene015079:CDS |
AGTTGCTCATTCGACTGTAA+TGG | 0.494258 | 3.2:-85521434 | None:intergenic |
TCGCTCTTTAGAAAGTAAAC+AGG | 0.494647 | 3.2:-85521363 | None:intergenic |
GAGAAACAATTGACTCGCTT+AGG | 0.495533 | 3.2:+85523204 | MS.gene015079:CDS |
AGTCGCTCTTTCGACTGTAA+TGG | 0.504195 | 3.2:-85521500 | None:intergenic |
AGTCGCTCTTTCGACTGTAA+TGG | 0.504195 | 3.2:-85521764 | None:intergenic |
CCATGTGTCTATAGCATCCT+CGG | 0.512950 | 3.2:-85523253 | None:intergenic |
TGTGAGCAGAAATTTCACTT+TGG | 0.513785 | 3.2:+85522673 | MS.gene015079:CDS |
ACTTCTTCCTCGGATTCTCT+CGG | 0.514079 | 3.2:-85521386 | None:intergenic |
CGTTATACTTCTCCTAACAA+TGG | 0.516763 | 3.2:+85521092 | MS.gene015079:CDS |
TGCAGTTGAAGGGTGTTTGA+GGG | 0.525454 | 3.2:-85521174 | None:intergenic |
AGTAACAATGTTGTTACAAG+CGG | 0.529847 | 3.2:+85522223 | MS.gene015079:CDS |
GGCCATTTAGGTTTCTTCAG+TGG | 0.532886 | 3.2:-85523375 | None:intergenic |
ACTGCTTCCTCAGATTCTCT+CGG | 0.534592 | 3.2:-85521719 | None:intergenic |
TGCGAGAGTTGCATTGAAGA+AGG | 0.537811 | 3.2:+85521143 | MS.gene015079:CDS |
GGGTAGTGGTAAAAGAGGGA+TGG | 0.540207 | 3.2:+85522102 | MS.gene015079:CDS |
GTTACTAATTCGGTGGGTAG+TGG | 0.540215 | 3.2:+85522088 | MS.gene015079:CDS |
TGTTGTTGTTGCTGCTTCCA+CGG | 0.540281 | 3.2:-85521465 | None:intergenic |
ACTGCTTCCTCGGATTCTCT+AGG | 0.540660 | 3.2:-85521254 | None:intergenic |
CAGGCACTATGTTCATATCA+GGG | 0.543358 | 3.2:-85520908 | None:intergenic |
CTCATTAGAAGTCAATTCAA+AGG | 0.543407 | 3.2:-85521963 | None:intergenic |
GGTAGTGGTAAAAGAGGGAT+GGG | 0.544447 | 3.2:+85522103 | MS.gene015079:CDS |
TTACTGGTGCTGCAGTTGAA+GGG | 0.544490 | 3.2:-85521184 | None:intergenic |
AAGATACTAGTGGATGATGT+AGG | 0.545362 | 3.2:-85522334 | None:intergenic |
GTGGAAACCAGTTAAGGTTG+CGG | 0.547741 | 3.2:+85522810 | MS.gene015079:CDS |
ACAGCTTCTGGACAATGCTC+AGG | 0.548245 | 3.2:-85520927 | None:intergenic |
TTTAACAGAAATGAAACTAG+AGG | 0.548944 | 3.2:-85521996 | None:intergenic |
ATAGAGAAGGTATAAGGGAA+AGG | 0.549390 | 3.2:+85522131 | MS.gene015079:CDS |
CGGTGGGTAGTGGTAAAAGA+GGG | 0.549718 | 3.2:+85522098 | MS.gene015079:CDS |
GTCCAGAAGCTGTAAGAGAA+TGG | 0.553572 | 3.2:+85520937 | MS.gene015079:CDS |
TCGGTGGGTAGTGGTAAAAG+AGG | 0.553960 | 3.2:+85522097 | MS.gene015079:CDS |
CAAGATTGCAAAGAAAGTGC+TGG | 0.555376 | 3.2:+85520978 | MS.gene015079:CDS |
GGGATGGGATTAAATAGAGA+AGG | 0.563176 | 3.2:+85522118 | MS.gene015079:CDS |
GGTCGTTGTTAGAATGTCAA+AGG | 0.570075 | 3.2:+85522371 | MS.gene015079:CDS |
ACCGGAAGTTACTAATTCGG+TGG | 0.573180 | 3.2:+85522081 | MS.gene015079:CDS |
AGGTTGCGGATAATCTAACT+TGG | 0.576168 | 3.2:+85522824 | MS.gene015079:CDS |
GGACAGAACCAATCACCATC+CGG | 0.576643 | 3.2:-85522562 | None:intergenic |
AGAGAAACCGAGAGAATCTG+AGG | 0.577170 | 3.2:+85521712 | MS.gene015079:CDS |
GGGACTAATGTGCTCTGTCG+TGG | 0.584268 | 3.2:+85522199 | MS.gene015079:CDS |
GTCGTTGTTAGAATGTCAAA+GGG | 0.585264 | 3.2:+85522372 | MS.gene015079:CDS |
TATGTCTAAAGAAGCTATTG+TGG | 0.590646 | 3.2:+85522791 | MS.gene015079:CDS |
CATAAGGATTTATGGTCACA+AGG | 0.591190 | 3.2:+85523104 | MS.gene015079:CDS |
AATCTTGTAGTCCTGTTAAG+CGG | 0.598627 | 3.2:-85520962 | None:intergenic |
AAGAAAGAACATCGAGGACA+AGG | 0.599999 | 3.2:+85523153 | MS.gene015079:CDS |
AGAGCGACTGAGAGAATCTG+AGG | 0.606930 | 3.2:+85521514 | MS.gene015079:CDS |
GTATCTTCTTGGAAGATGGA+AGG | 0.608492 | 3.2:+85522350 | MS.gene015079:CDS |
CAACTGAGGTGGAATACAGA+AGG | 0.615320 | 3.2:-85522520 | None:intergenic |
CAAGATCTAAACAACTGAGG+TGG | 0.615408 | 3.2:-85522531 | None:intergenic |
GCTGGATTTAAGGATCATGC+TGG | 0.615585 | 3.2:+85522301 | MS.gene015079:CDS |
GATCTTGATCGAGTTCCGGA+TGG | 0.620225 | 3.2:+85522547 | MS.gene015079:CDS |
ATCTTCCAAGAAGATACTAG+TGG | 0.622444 | 3.2:-85522344 | None:intergenic |
CCGGAAGTTACTAATTCGGT+GGG | 0.625187 | 3.2:+85522082 | MS.gene015079:CDS |
AGAGCGACCGAGAGAATCCG+AGG | 0.626644 | 3.2:+85521379 | MS.gene015079:CDS |
AGAGCGACTGAGAGAATGCG+AGG | 0.629289 | 3.2:+85521778 | MS.gene015079:CDS |
GAGAGTTGCATTGAAGAAGG+AGG | 0.635933 | 3.2:+85521146 | MS.gene015079:CDS |
AGAGTTGCATTGAAGAAGGA+GGG | 0.637310 | 3.2:+85521147 | MS.gene015079:CDS |
GTAACAATGTTGTTACAAGC+GGG | 0.638089 | 3.2:+85522224 | MS.gene015079:CDS |
TGAGCAACTGAGAGAATCCG+TGG | 0.638615 | 3.2:+85521448 | MS.gene015079:CDS |
AGGATATGAATCTAGTCACA+TGG | 0.639199 | 3.2:+85522711 | MS.gene015079:CDS |
CCGAGGATGCTATAGACACA+TGG | 0.641134 | 3.2:+85523253 | MS.gene015079:CDS |
AAAGCAACCAAGTGAATCCG+AGG | 0.642797 | 3.2:+85521910 | MS.gene015079:CDS |
TCGCTTAGGAGTAGAAAGCA+TGG | 0.644182 | 3.2:+85523218 | MS.gene015079:CDS |
AAAGCGTCCTAGAGAATCCG+AGG | 0.646241 | 3.2:+85521247 | MS.gene015079:CDS |
GGCACTATGTTCATATCAGG+GGG | 0.651855 | 3.2:-85520906 | None:intergenic |
AGGCACTATGTTCATATCAG+GGG | 0.652316 | 3.2:-85520907 | None:intergenic |
CTAAATGGCCTTACACTGCG+TGG | 0.653302 | 3.2:+85523388 | MS.gene015079:CDS |
GGAGCGACAGAGAAAATCTG+AGG | 0.653734 | 3.2:+85521313 | MS.gene015079:CDS |
AATGTGAATAGTGATGATGA+TGG | 0.655587 | 3.2:+85522859 | MS.gene015079:CDS |
TCCGAGGTATCAGTAGCAAG+AGG | 0.658945 | 3.2:+85521596 | MS.gene015079:CDS |
AGTGCAACCGAAGGAATCCG+AGG | 0.659623 | 3.2:+85521580 | MS.gene015079:CDS |
ACAGCTGAAAGTGCAACCGA+AGG | 0.661328 | 3.2:+85521571 | MS.gene015079:CDS |
CATCGCCGATAAAAGAGCAA+CGG | 0.665684 | 3.2:+85521831 | MS.gene015079:CDS |
AATGGAGGAAGTGATTTCGG+TGG | 0.688617 | 3.2:+85523077 | MS.gene015079:CDS |
GATCAAGATCTAAACAACTG+AGG | 0.693653 | 3.2:-85522534 | None:intergenic |
TGTTGATAATGTAGTAACCG+TGG | 0.738318 | 3.2:-85522023 | None:intergenic |
GTCACCAAGAAAGAACATCG+AGG | 0.800027 | 3.2:+85523147 | MS.gene015079:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATTACTTTCTTAGAATTTC+AGG | + | chr3.2:85523332-85523351 | MS.gene015079:CDS | 20.0% |
!!! | ATTAAATAGAGAAGGTATAA+GGG | + | chr3.2:85522126-85522145 | MS.gene015079:CDS | 20.0% |
!!! | GTTGATAAAGAATAAAGTTT+TGG | + | chr3.2:85522171-85522190 | MS.gene015079:CDS | 20.0% |
! | AAAACAACATCTTCTTTCTT+TGG | + | chr3.2:85521025-85521044 | MS.gene015079:CDS | 25.0% |
! | AAACAACATCTTCTTTCTTT+GGG | + | chr3.2:85521026-85521045 | MS.gene015079:CDS | 25.0% |
! | AACAAGAATACTGTTATCAT+TGG | - | chr3.2:85522644-85522663 | None:intergenic | 25.0% |
! | GTGATGTTAAAAAGAAGAAT+TGG | + | chr3.2:85522737-85522756 | MS.gene015079:CDS | 25.0% |
! | TACTACATTATCAACATCAA+TGG | + | chr3.2:85522030-85522049 | MS.gene015079:CDS | 25.0% |
! | TGACAACAACATCAATATAT+TGG | + | chr3.2:85521408-85521427 | MS.gene015079:CDS | 25.0% |
! | TTTAACAGAAATGAAACTAG+AGG | - | chr3.2:85521999-85522018 | None:intergenic | 25.0% |
!! | GATTAAATAGAGAAGGTATA+AGG | + | chr3.2:85522125-85522144 | MS.gene015079:CDS | 25.0% |
!! | TGGTTTCTATAATGTGATTT+TGG | + | chr3.2:85523050-85523069 | MS.gene015079:CDS | 25.0% |
!!! | AAGAATAAAGTTTTGGTTTC+AGG | + | chr3.2:85522178-85522197 | MS.gene015079:CDS | 25.0% |
!!! | AGAATAAAGTTTTGGTTTCA+GGG | + | chr3.2:85522179-85522198 | MS.gene015079:CDS | 25.0% |
!!! | AGGCTTTTTTAAGAGTAATA+TGG | - | chr3.2:85521124-85521143 | None:intergenic | 25.0% |
!!! | TAATGTGATTTTGGAGAAAA+TGG | + | chr3.2:85523059-85523078 | MS.gene015079:CDS | 25.0% |
AGTAACAATGTTGTTACAAG+CGG | + | chr3.2:85522223-85522242 | MS.gene015079:CDS | 30.0% | |
CATTTCTGTTAAAAAAGCCA+CGG | + | chr3.2:85522006-85522025 | MS.gene015079:CDS | 30.0% | |
CTCATTAGAAGTCAATTCAA+AGG | - | chr3.2:85521966-85521985 | None:intergenic | 30.0% | |
CTTTGGTACATTGACAAAAA+TGG | + | chr3.2:85521056-85521075 | MS.gene015079:CDS | 30.0% | |
GATACTGTTTGTTCTATTTG+TGG | + | chr3.2:85522463-85522482 | MS.gene015079:CDS | 30.0% | |
GTTATACTTCTCCTAACAAT+GGG | + | chr3.2:85521093-85521112 | MS.gene015079:CDS | 30.0% | |
TAAACCGGAAGTTACTAATT+CGG | + | chr3.2:85522078-85522097 | MS.gene015079:CDS | 30.0% | |
TATGTCTAAAGAAGCTATTG+TGG | + | chr3.2:85522791-85522810 | MS.gene015079:CDS | 30.0% | |
! | AATGTGAATAGTGATGATGA+TGG | + | chr3.2:85522859-85522878 | MS.gene015079:CDS | 30.0% |
! | ATATGGTTTTTCCCATTGTT+AGG | - | chr3.2:85521107-85521126 | None:intergenic | 30.0% |
! | CATATTTTGCAACAACAAGT+TGG | - | chr3.2:85522586-85522605 | None:intergenic | 30.0% |
! | CTTTGAATTGACTTCTAATG+AGG | + | chr3.2:85521964-85521983 | MS.gene015079:CDS | 30.0% |
! | GTACATTCTTGTTTACGTTT+AGG | - | chr3.2:85522616-85522635 | None:intergenic | 30.0% |
! | GTTTGTTCTATTTGTGGTTT+TGG | + | chr3.2:85522469-85522488 | MS.gene015079:CDS | 30.0% |
!! | AAAGGTATTCACTTGTTTCT+TGG | + | chr3.2:85522149-85522168 | MS.gene015079:CDS | 30.0% |
!! | ATTTGCTTCATAGTTTGCTT+CGG | - | chr3.2:85522440-85522459 | None:intergenic | 30.0% |
!!! | AATTTTAATTTCACTCTCGC+TGG | + | chr3.2:85522283-85522302 | MS.gene015079:CDS | 30.0% |
!!! | CAAAATCTTTTGGTTTTGAG+AGG | + | chr3.2:85523277-85523296 | MS.gene015079:CDS | 30.0% |
AACATCTTCTTTCTTTGGGT+TGG | + | chr3.2:85521030-85521049 | MS.gene015079:CDS | 35.0% | |
AACCACTGAAGAAACCTAAA+TGG | + | chr3.2:85523373-85523392 | MS.gene015079:CDS | 35.0% | |
AATCTTGTAGTCCTGTTAAG+CGG | - | chr3.2:85520965-85520984 | None:intergenic | 35.0% | |
ACATTGACAAAAATGGTAGG+AGG | + | chr3.2:85521063-85521082 | MS.gene015079:CDS | 35.0% | |
ACTAGTATCTTCTTGGAAGA+TGG | + | chr3.2:85522346-85522365 | MS.gene015079:CDS | 35.0% | |
AGGATATGAATCTAGTCACA+TGG | + | chr3.2:85522711-85522730 | MS.gene015079:CDS | 35.0% | |
ATCATCCACTAGTATCTTCT+TGG | + | chr3.2:85522339-85522358 | MS.gene015079:CDS | 35.0% | |
ATCTTCCAAGAAGATACTAG+TGG | - | chr3.2:85522347-85522366 | None:intergenic | 35.0% | |
ATTATTGTTGCTGCTGTTAC+TGG | - | chr3.2:85521203-85521222 | None:intergenic | 35.0% | |
ATTTCACTTTGGGTGTGTAA+AGG | + | chr3.2:85522684-85522703 | MS.gene015079:CDS | 35.0% | |
CATAAGGATTTATGGTCACA+AGG | + | chr3.2:85523104-85523123 | MS.gene015079:CDS | 35.0% | |
CATTGACAAAAATGGTAGGA+GGG | + | chr3.2:85521064-85521083 | MS.gene015079:CDS | 35.0% | |
CCAACAATTGATGCTTTATC+TGG | + | chr3.2:85522964-85522983 | MS.gene015079:CDS | 35.0% | |
CGTTATACTTCTCCTAACAA+TGG | + | chr3.2:85521092-85521111 | MS.gene015079:CDS | 35.0% | |
CTTGTGACCATAAATCCTTA+TGG | - | chr3.2:85523106-85523125 | None:intergenic | 35.0% | |
GAAAATGGAGGAAGTGATTT+CGG | + | chr3.2:85523074-85523093 | MS.gene015079:CDS | 35.0% | |
GATCAAGATCTAAACAACTG+AGG | - | chr3.2:85522537-85522556 | None:intergenic | 35.0% | |
GCATGTGATTCAATCTAAAC+CGG | + | chr3.2:85522063-85522082 | MS.gene015079:CDS | 35.0% | |
GGTACATTGACAAAAATGGT+AGG | + | chr3.2:85521060-85521079 | MS.gene015079:CDS | 35.0% | |
GGTTTCTCTTTCAACTGTAA+TGG | - | chr3.2:85521701-85521720 | None:intergenic | 35.0% | |
GTAACAATGTTGTTACAAGC+GGG | + | chr3.2:85522224-85522243 | MS.gene015079:CDS | 35.0% | |
GTCGTTGTTAGAATGTCAAA+GGG | + | chr3.2:85522372-85522391 | MS.gene015079:CDS | 35.0% | |
GTGAGCAGAAATTTCACTTT+GGG | + | chr3.2:85522674-85522693 | MS.gene015079:CDS | 35.0% | |
TAGGTTTCTTCAGTGGTTTA+AGG | - | chr3.2:85523371-85523390 | None:intergenic | 35.0% | |
TGTGAGCAGAAATTTCACTT+TGG | + | chr3.2:85522673-85522692 | MS.gene015079:CDS | 35.0% | |
TTTAGATCTTGATCGAGTTC+CGG | + | chr3.2:85522543-85522562 | MS.gene015079:CDS | 35.0% | |
! | AAGATACTAGTGGATGATGT+AGG | - | chr3.2:85522337-85522356 | None:intergenic | 35.0% |
! | ATAGAGAAGGTATAAGGGAA+AGG | + | chr3.2:85522131-85522150 | MS.gene015079:CDS | 35.0% |
! | CCAGATAAAGCATCAATTGT+TGG | - | chr3.2:85522967-85522986 | None:intergenic | 35.0% |
! | GACACATGGACAAAATCTTT+TGG | + | chr3.2:85523267-85523286 | MS.gene015079:CDS | 35.0% |
! | TCGCTCTTTAGAAAGTAAAC+AGG | - | chr3.2:85521366-85521385 | None:intergenic | 35.0% |
! | TTTTTCTCAACTACAGCTGA+AGG | + | chr3.2:85521292-85521311 | MS.gene015079:CDS | 35.0% |
!! | TGTGATTTTGGAGAAAATGG+AGG | + | chr3.2:85523062-85523081 | MS.gene015079:CDS | 35.0% |
!! | TGTTGATAATGTAGTAACCG+TGG | - | chr3.2:85522026-85522045 | None:intergenic | 35.0% |
!!! | TGTTCTATTTGTGGTTTTGG+AGG | + | chr3.2:85522472-85522491 | MS.gene015079:CDS | 35.0% |
AAGAAAGAACATCGAGGACA+AGG | + | chr3.2:85523153-85523172 | MS.gene015079:CDS | 40.0% | |
AGAGTTGCATTGAAGAAGGA+GGG | + | chr3.2:85521147-85521166 | MS.gene015079:CDS | 40.0% | |
AGATTATCCGCAACCTTAAC+TGG | - | chr3.2:85522820-85522839 | None:intergenic | 40.0% | |
AGGCACTATGTTCATATCAG+GGG | - | chr3.2:85520910-85520929 | None:intergenic | 40.0% | |
AGGTTGCGGATAATCTAACT+TGG | + | chr3.2:85522824-85522843 | MS.gene015079:CDS | 40.0% | |
AGTTGCTCATTCGACTGTAA+TGG | - | chr3.2:85521437-85521456 | None:intergenic | 40.0% | |
CAAGATCTAAACAACTGAGG+TGG | - | chr3.2:85522534-85522553 | None:intergenic | 40.0% | |
CAGGCACTATGTTCATATCA+GGG | - | chr3.2:85520911-85520930 | None:intergenic | 40.0% | |
GCTATTGTGGAAACCAGTTA+AGG | + | chr3.2:85522804-85522823 | MS.gene015079:CDS | 40.0% | |
GGGATGGGATTAAATAGAGA+AGG | + | chr3.2:85522118-85522137 | MS.gene015079:CDS | 40.0% | |
GGTCGTTGTTAGAATGTCAA+AGG | + | chr3.2:85522371-85522390 | MS.gene015079:CDS | 40.0% | |
GTATCTTCTTGGAAGATGGA+AGG | + | chr3.2:85522350-85522369 | MS.gene015079:CDS | 40.0% | |
GTGGCTACCATAAGGATTTA+TGG | + | chr3.2:85523096-85523115 | MS.gene015079:CDS | 40.0% | |
TCAGGCACTATGTTCATATC+AGG | - | chr3.2:85520912-85520931 | None:intergenic | 40.0% | |
TTGTCCTCGATGTTCTTTCT+TGG | - | chr3.2:85523154-85523173 | None:intergenic | 40.0% | |
TTTCACTCTCGCTGGATTTA+AGG | + | chr3.2:85522291-85522310 | MS.gene015079:CDS | 40.0% | |
! | CAAGATTGCAAAGAAAGTGC+TGG | + | chr3.2:85520978-85520997 | MS.gene015079:CDS | 40.0% |
! | CATAAGCGCTTGAACTTTTG+TGG | + | chr3.2:85523030-85523049 | MS.gene015079:CDS | 40.0% |
! | TCTCTCCGTTGCTCTTTTAT+CGG | - | chr3.2:85521839-85521858 | None:intergenic | 40.0% |
! | TGTTGTTGTCACTTCTTCCT+CGG | - | chr3.2:85521399-85521418 | None:intergenic | 40.0% |
!! | AGCGGGAGTATATTTTGTGA+TGG | + | chr3.2:85522241-85522260 | MS.gene015079:CDS | 40.0% |
!! | AGGAATGTGTCGTTTGTTGA+TGG | + | chr3.2:85523173-85523192 | MS.gene015079:CDS | 40.0% |
!! | CAAAGAAAGTGCTGGTAGAA+AGG | + | chr3.2:85520986-85521005 | MS.gene015079:CDS | 40.0% |
!! | GAGAAACAATTGACTCGCTT+AGG | + | chr3.2:85523204-85523223 | MS.gene015079:CDS | 40.0% |
!! | TTTCTTTGGGTTGGAAGCTT+TGG | + | chr3.2:85521039-85521058 | MS.gene015079:CDS | 40.0% |
!!! | GGTTGCTTTTTCGACTGTAA+TGG | - | chr3.2:85521899-85521918 | None:intergenic | 40.0% |
!!! | TTTGGTTTTGAGAGGATGAC+AGG | + | chr3.2:85523285-85523304 | MS.gene015079:CDS | 40.0% |
AAAGCAACCAAGTGAATCCG+AGG | + | chr3.2:85521910-85521929 | MS.gene015079:CDS | 45.0% | |
AATGGAGGAAGTGATTTCGG+TGG | + | chr3.2:85523077-85523096 | MS.gene015079:CDS | 45.0% | |
ACCGGAAGTTACTAATTCGG+TGG | + | chr3.2:85522081-85522100 | MS.gene015079:CDS | 45.0% | |
ACTGATACCTCGGATTCCTT+CGG | - | chr3.2:85521590-85521609 | None:intergenic | 45.0% | |
ACTGCTTCCTCAGATTCTCT+CGG | - | chr3.2:85521722-85521741 | None:intergenic | 45.0% | |
ACTTCTTCCTCGGATTCTCT+CGG | - | chr3.2:85521389-85521408 | None:intergenic | 45.0% | |
AGAGAAACCGAGAGAATCTG+AGG | + | chr3.2:85521712-85521731 | MS.gene015079:CDS | 45.0% | |
AGTCGCTCAATCGACTGAAA+TGG | - | chr3.2:85521635-85521654 | None:intergenic | 45.0% | |
AGTCGCTCTTTCGACTGTAA+TGG | - | chr3.2:85521503-85521522 | None:intergenic | 45.0% | |
CAACTGAGGTGGAATACAGA+AGG | - | chr3.2:85522523-85522542 | None:intergenic | 45.0% | |
CACCATTCTCTTACAGCTTC+TGG | - | chr3.2:85520942-85520961 | None:intergenic | 45.0% | |
CATCGCCGATAAAAGAGCAA+CGG | + | chr3.2:85521831-85521850 | MS.gene015079:CDS | 45.0% | |
CCATGTGTCTATAGCATCCT+CGG | - | chr3.2:85523256-85523275 | None:intergenic | 45.0% | |
CCCACCGAATTAGTAACTTC+CGG | - | chr3.2:85522085-85522104 | None:intergenic | 45.0% | |
CCGGAAGTTACTAATTCGGT+GGG | + | chr3.2:85522082-85522101 | MS.gene015079:CDS | 45.0% | |
GAGAGTTGCATTGAAGAAGG+AGG | + | chr3.2:85521146-85521165 | MS.gene015079:CDS | 45.0% | |
GCTGGATTTAAGGATCATGC+TGG | + | chr3.2:85522301-85522320 | MS.gene015079:CDS | 45.0% | |
GGCACTATGTTCATATCAGG+GGG | - | chr3.2:85520909-85520928 | None:intergenic | 45.0% | |
GGTTGCACTTTCAGCTGTAA+TGG | - | chr3.2:85521569-85521588 | None:intergenic | 45.0% | |
GTCACCAAGAAAGAACATCG+AGG | + | chr3.2:85523147-85523166 | MS.gene015079:CDS | 45.0% | |
GTCCAGAAGCTGTAAGAGAA+TGG | + | chr3.2:85520937-85520956 | MS.gene015079:CDS | 45.0% | |
GTGGAAACCAGTTAAGGTTG+CGG | + | chr3.2:85522810-85522829 | MS.gene015079:CDS | 45.0% | |
TCCTCTTGCTACTGATACCT+CGG | - | chr3.2:85521600-85521619 | None:intergenic | 45.0% | |
TCGCTTAGGAGTAGAAAGCA+TGG | + | chr3.2:85523218-85523237 | MS.gene015079:CDS | 45.0% | |
TGATTTCGGTGGCTACCATA+AGG | + | chr3.2:85523088-85523107 | MS.gene015079:CDS | 45.0% | |
TGCGAGAGTTGCATTGAAGA+AGG | + | chr3.2:85521143-85521162 | MS.gene015079:CDS | 45.0% | |
TTCTTCAATGCAACTCTCGC+AGG | - | chr3.2:85521144-85521163 | None:intergenic | 45.0% | |
TTTGGGTGTGTAAAGGCAAC+AGG | + | chr3.2:85522691-85522710 | MS.gene015079:CDS | 45.0% | |
! | GCAATATAGTTTGCGCGAAC+AGG | + | chr3.2:85522764-85522783 | MS.gene015079:CDS | 45.0% |
! | GGCCATTTAGGTTTCTTCAG+TGG | - | chr3.2:85523378-85523397 | None:intergenic | 45.0% |
! | GGTAGTGGTAAAAGAGGGAT+GGG | + | chr3.2:85522103-85522122 | MS.gene015079:CDS | 45.0% |
! | GGTTGCTGAGATAGTTTTCG+TGG | + | chr3.2:85523125-85523144 | MS.gene015079:CDS | 45.0% |
! | GTTACTAATTCGGTGGGTAG+TGG | + | chr3.2:85522088-85522107 | MS.gene015079:CDS | 45.0% |
! | TGTTGTTGTTGCTGCTTCCA+CGG | - | chr3.2:85521468-85521487 | None:intergenic | 45.0% |
!! | CATGGTTTTGCATTCATCCG+AGG | + | chr3.2:85523236-85523255 | MS.gene015079:CDS | 45.0% |
!! | TGCAGTTGAAGGGTGTTTGA+GGG | - | chr3.2:85521177-85521196 | None:intergenic | 45.0% |
!! | TTACTGGTGCTGCAGTTGAA+GGG | - | chr3.2:85521187-85521206 | None:intergenic | 45.0% |
ACAGCTTCTGGACAATGCTC+AGG | - | chr3.2:85520930-85520949 | None:intergenic | 50.0% | |
ACTGCTTCCTCGGATTCTCT+AGG | - | chr3.2:85521257-85521276 | None:intergenic | 50.0% | |
AGAGCGACTGAGAGAATCTG+AGG | + | chr3.2:85521514-85521533 | MS.gene015079:CDS | 50.0% | |
ATCGAGTTCCGGATGGTGAT+TGG | + | chr3.2:85522554-85522573 | MS.gene015079:CDS | 50.0% | |
CACGCAGTGTAAGGCCATTT+AGG | - | chr3.2:85523390-85523409 | None:intergenic | 50.0% | |
CCGAGGATGCTATAGACACA+TGG | + | chr3.2:85523253-85523272 | MS.gene015079:CDS | 50.0% | |
GATCTTGATCGAGTTCCGGA+TGG | + | chr3.2:85522547-85522566 | MS.gene015079:CDS | 50.0% | |
GGACAGAACCAATCACCATC+CGG | - | chr3.2:85522565-85522584 | None:intergenic | 50.0% | |
GGAGCGACAGAGAAAATCTG+AGG | + | chr3.2:85521313-85521332 | MS.gene015079:CDS | 50.0% | |
TGAGCAACTGAGAGAATCCG+TGG | + | chr3.2:85521448-85521467 | MS.gene015079:CDS | 50.0% | |
TGCTCTAGCTACTGCTTCCT+CGG | - | chr3.2:85521267-85521286 | None:intergenic | 50.0% | |
! | AAAGCGTCCTAGAGAATCCG+AGG | + | chr3.2:85521247-85521266 | MS.gene015079:CDS | 50.0% |
! | ACAGCTGAAAGTGCAACCGA+AGG | + | chr3.2:85521571-85521590 | MS.gene015079:CDS | 50.0% |
! | CGGTGGGTAGTGGTAAAAGA+GGG | + | chr3.2:85522098-85522117 | MS.gene015079:CDS | 50.0% |
! | CGTTGCTCTTTTATCGGCGA+TGG | - | chr3.2:85521833-85521852 | None:intergenic | 50.0% |
! | CTAAATGGCCTTACACTGCG+TGG | + | chr3.2:85523388-85523407 | MS.gene015079:CDS | 50.0% |
! | GGGTAGTGGTAAAAGAGGGA+TGG | + | chr3.2:85522102-85522121 | MS.gene015079:CDS | 50.0% |
! | TCCGAGGTATCAGTAGCAAG+AGG | + | chr3.2:85521596-85521615 | MS.gene015079:CDS | 50.0% |
! | TCGGTGGGTAGTGGTAAAAG+AGG | + | chr3.2:85522097-85522116 | MS.gene015079:CDS | 50.0% |
! | TGCTATTGCTGCTGCTTCCT+CGG | - | chr3.2:85521930-85521949 | None:intergenic | 50.0% |
!! | AGAGAATGGTGCCGCTTAAC+AGG | + | chr3.2:85520951-85520970 | MS.gene015079:CDS | 50.0% |
!! | CTGCAGTTGAAGGGTGTTTG+AGG | - | chr3.2:85521178-85521197 | None:intergenic | 50.0% |
!! | GTTACTGGTGCTGCAGTTGA+AGG | - | chr3.2:85521188-85521207 | None:intergenic | 50.0% |
!!! | GGACGCTTTTTCGACTGTGA+TGG | - | chr3.2:85521236-85521255 | None:intergenic | 50.0% |
AGAGCGACTGAGAGAATGCG+AGG | + | chr3.2:85521778-85521797 | MS.gene015079:CDS | 55.0% | |
AGTGCAACCGAAGGAATCCG+AGG | + | chr3.2:85521580-85521599 | MS.gene015079:CDS | 55.0% | |
GCTGCTTCCTCGGATTCACT+TGG | - | chr3.2:85521920-85521939 | None:intergenic | 55.0% | |
GGGACTAATGTGCTCTGTCG+TGG | + | chr3.2:85522199-85522218 | MS.gene015079:CDS | 55.0% | |
AGAGCGACCGAGAGAATCCG+AGG | + | chr3.2:85521379-85521398 | MS.gene015079:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 85520888 | 85523416 | 85520888 | ID=MS.gene015079 |
chr3.2 | mRNA | 85520888 | 85523416 | 85520888 | ID=MS.gene015079.t1;Parent=MS.gene015079 |
chr3.2 | exon | 85520888 | 85523416 | 85520888 | ID=MS.gene015079.t1.exon1;Parent=MS.gene015079.t1 |
chr3.2 | CDS | 85520888 | 85523416 | 85520888 | ID=cds.MS.gene015079.t1;Parent=MS.gene015079.t1 |
Gene Sequence |
Protein sequence |