AlfalfaGEDB | MS.gene015114

M. sativa cultivar XinJiangDaYe / MS.gene015114

KEGG: -
GO: GO:0000160 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0007165 GO:0008150 GO:0009987 GO:0035556 GO:0050789 GO:0050794 GO:0065007 GO:0097159 GO:1901363
PFAM: PF00072.27

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene015114.t1	KEH35772.1	94.4	195	10	1	1	194	1	195	2.00E-94	355.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene015114.t1	A2X1N2	52.9	240	59	2	6	191	23	262	2.0e-58	226.9

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene015114.t1	A0A072V1R9	94.4	195	10	1	1	194	1	195	1.4e-94	355.1

TFs/TRs:

Gene ID	Type	Classification
MS.gene015114.t1	TR	Others

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene015114.t1	MTR_3g102590	94.359	195	10	1	1	194	1	195	1.78e-122	344
MS.gene015114.t1	MTR_3g102590	94.271	192	10	1	1	191	1	192	1.08e-119	339
MS.gene015114.t1	MTR_3g102600	71.649	194	45	1	1	194	1	184	7.02e-92	266
MS.gene015114.t1	MTR_3g102600	71.728	191	44	1	1	191	1	181	3.52e-89	261
MS.gene015114.t1	MTR_1g013170	51.883	239	63	2	5	191	2	240	2.37e-74	232
MS.gene015114.t1	MTR_7g117705	48.954	239	70	3	5	191	2	240	6.78e-69	217
MS.gene015114.t1	MTR_3g102600	69.655	145	34	1	50	194	1	135	9.52e-68	204
MS.gene015114.t1	MTR_4g131600	49.784	231	69	1	8	191	20	250	1.99e-66	214
MS.gene015114.t1	MTR_1g013180	48.954	239	70	2	5	191	153	391	2.96e-66	215
MS.gene015114.t1	MTR_3g102600	69.718	142	33	1	50	191	1	132	2.66e-65	199
MS.gene015114.t1	MTR_4g121020	48.117	239	74	2	3	191	26	264	2.94e-65	212
MS.gene015114.t1	MTR_4g121020	48.117	239	74	2	3	191	26	264	2.98e-65	212
MS.gene015114.t1	MTR_2g034960	46.383	235	78	2	5	191	26	260	3.55e-64	208
MS.gene015114.t1	MTR_1g032570	45.679	243	77	2	4	191	7	249	4.18e-62	203
MS.gene015114.t1	MTR_4g131580	46.025	239	80	1	2	191	11	249	8.69e-62	202
MS.gene015114.t1	MTR_4g131570	46.610	236	74	1	8	191	17	252	2.94e-61	200
MS.gene015114.t1	MTR_3g106220	73.134	134	36	0	1	134	1	134	8.96e-61	200
MS.gene015114.t1	MTR_3g106220	81.356	59	11	0	133	191	189	247	1.16e-24	100
MS.gene015114.t1	MTR_3g086100	43.220	236	82	2	8	191	13	248	4.23e-58	191
MS.gene015114.t1	MTR_8g079940	44.068	236	82	2	6	191	23	258	4.61e-56	185
MS.gene015114.t1	MTR_2g450070	63.359	131	48	0	2	132	12	142	2.63e-49	169
MS.gene015114.t1	MTR_2g450070	68.519	54	17	0	138	191	209	262	4.15e-17	79.0
MS.gene015114.t1	MTR_2g450070	63.359	131	48	0	2	132	12	142	3.08e-49	169
MS.gene015114.t1	MTR_2g450070	68.519	54	17	0	138	191	209	262	4.06e-17	79.0
MS.gene015114.t1	MTR_4g021760	39.720	214	103	3	3	191	6	218	1.16e-47	158
MS.gene015114.t1	MTR_4g021845	36.321	212	109	3	8	194	10	220	8.25e-43	143
MS.gene015114.t1	MTR_1g032570	43.333	180	47	2	67	191	1	180	1.03e-39	142
MS.gene015114.t1	MTR_4g021790	36.364	209	107	3	8	191	10	217	1.72e-39	136
MS.gene015114.t1	MTR_4g021855	35.407	209	109	3	8	191	10	217	6.66e-39	135
MS.gene015114.t1	MTR_0450s0040	32.227	211	112	1	12	191	8	218	7.67e-36	128
MS.gene015114.t1	MTR_3g086100	40.113	177	54	2	67	191	1	177	1.57e-35	130
MS.gene015114.t1	MTR_7g026400	35.233	193	89	1	35	191	14	206	3.64e-34	127
MS.gene015114.t1	MTR_6g045327	33.495	206	111	3	13	193	19	223	1.24e-32	120
MS.gene015114.t1	MTR_1g013160	43.243	148	32	2	70	165	1	148	1.15e-31	112
MS.gene015114.t1	MTR_4g121020	41.290	155	41	2	87	191	6	160	4.84e-29	113
MS.gene015114.t1	MTR_8g105600	31.304	230	110	5	8	191	9	236	1.70e-27	108
MS.gene015114.t1	MTR_5g055260	34.021	194	105	6	8	191	10	190	3.94e-26	100
MS.gene015114.t1	MTR_8g093040	35.811	148	92	2	1	145	7	154	3.18e-23	94.0
MS.gene015114.t1	MTR_3g084390	53.165	79	27	1	1	69	1	79	5.19e-22	85.5
MS.gene015114.t1	MTR_4g023980	32.374	139	69	2	55	168	36	174	8.26e-22	87.8
MS.gene015114.t1	MTR_6g016850	33.594	128	82	2	5	130	6	132	3.53e-21	85.9
MS.gene015114.t1	MTR_3g092780	30.952	168	107	3	12	171	56	222	2.55e-19	85.5
MS.gene015114.t1	MTR_3g092780	30.952	168	107	3	12	171	56	222	2.61e-19	85.5
MS.gene015114.t1	MTR_3g092780	31.138	167	107	3	12	171	56	221	6.88e-19	84.0
MS.gene015114.t1	MTR_3g092780	31.138	167	107	3	12	171	56	221	6.98e-19	84.0
MS.gene015114.t1	MTR_5g014040	38.400	125	71	3	8	130	14	134	9.36e-19	83.6
MS.gene015114.t1	MTR_5g014040	52.632	57	27	0	135	191	304	360	3.31e-12	64.7
MS.gene015114.t1	MTR_5g014040	38.400	125	71	3	8	130	14	134	9.86e-19	83.6
MS.gene015114.t1	MTR_5g014040	53.333	60	27	1	135	194	304	362	2.99e-12	64.7
MS.gene015114.t1	MTR_7g118260	32.450	151	96	3	1	145	1	151	1.34e-18	83.2
MS.gene015114.t1	MTR_8g024260	36.667	120	73	1	14	130	38	157	1.64e-18	83.2
MS.gene015114.t1	MTR_4g108880	31.200	125	83	1	11	132	32	156	4.52e-18	81.6
MS.gene015114.t1	MTR_3g037390	32.000	125	82	1	11	132	23	147	5.18e-18	81.6
MS.gene015114.t1	MTR_7g118260	29.825	171	115	2	1	166	1	171	6.98e-18	81.3
MS.gene015114.t1	MTR_1g067110	31.690	142	94	1	12	150	85	226	1.83e-17	80.1
MS.gene015114.t1	MTR_1g067110	31.690	142	94	1	12	150	85	226	1.91e-17	80.1
MS.gene015114.t1	MTR_4g061360	35.246	122	76	2	12	130	89	210	1.27e-16	77.8
MS.gene015114.t1	MTR_4g098870	32.520	123	81	1	8	130	34	154	1.08e-15	74.7
MS.gene015114.t1	MTR_4g098870	51.515	66	29	2	127	191	316	379	2.87e-12	64.7
MS.gene015114.t1	MTR_4g098870	32.520	123	81	1	8	130	14	134	1.15e-15	74.7
MS.gene015114.t1	MTR_4g098870	51.515	66	29	2	127	191	296	359	2.89e-12	64.7
MS.gene015114.t1	MTR_4g098870	32.520	123	81	1	8	130	53	173	1.30e-15	74.7
MS.gene015114.t1	MTR_4g098870	51.515	66	29	2	127	191	335	398	3.87e-12	64.7
MS.gene015114.t1	MTR_4g098870	32.520	123	81	1	8	130	34	154	1.34e-15	74.7
MS.gene015114.t1	MTR_4g098870	51.515	66	29	2	127	191	316	379	4.03e-12	64.3
MS.gene015114.t1	MTR_4g098870	32.520	123	81	1	8	130	14	134	1.39e-15	74.3
MS.gene015114.t1	MTR_4g098870	51.515	66	29	2	127	191	296	359	3.95e-12	64.3
MS.gene015114.t1	MTR_6g088950	32.292	96	65	0	38	133	34	129	2.03e-15	71.6
MS.gene015114.t1	MTR_5g014040	53.333	60	27	1	135	194	264	322	3.12e-12	64.7
MS.gene015114.t1	MTR_8g032710	32.203	118	79	1	12	128	21	138	7.90e-12	63.5
MS.gene015114.t1	MTR_4g078810	47.170	53	28	0	139	191	155	207	4.10e-11	61.2
MS.gene015114.t1	MTR_4g064730	52.941	51	24	0	141	191	130	180	7.79e-11	60.1
MS.gene015114.t1	MTR_2g090675	47.170	53	28	0	139	191	158	210	8.43e-11	60.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene015114.t1	AT2G25180	52.321	237	65	2	3	191	8	244	2.43e-74	234
MS.gene015114.t1	AT4G31920	52.703	222	69	1	6	191	11	232	7.13e-74	232
MS.gene015114.t1	AT5G58080	46.414	237	79	2	2	191	8	243	1.80e-60	199
MS.gene015114.t1	AT1G67710	45.763	236	75	3	9	191	8	243	2.40e-58	191
MS.gene015114.t1	AT2G01760	40.244	246	88	3	5	191	4	249	1.43e-51	170
MS.gene015114.t1	AT2G01760	36.131	274	88	4	5	191	4	277	1.83e-45	155
MS.gene015114.t1	AT3G16857	53.103	145	56	1	8	152	33	165	1.93e-44	156
MS.gene015114.t1	AT3G16857	56.410	78	24	1	124	191	209	286	1.32e-19	86.3
MS.gene015114.t1	AT3G16857	53.103	145	56	1	8	152	33	165	2.18e-44	156
MS.gene015114.t1	AT3G16857	56.410	78	24	1	124	191	209	286	1.23e-19	86.3
MS.gene015114.t1	AT1G67710	43.820	178	47	3	67	191	1	178	2.80e-36	131
MS.gene015114.t1	AT5G49240	31.535	241	114	2	5	194	35	275	7.03e-36	127
MS.gene015114.t1	AT3G62670	34.177	237	107	5	2	191	31	265	2.35e-33	123
MS.gene015114.t1	AT3G16857	54.206	107	37	1	46	152	1	95	1.03e-32	123
MS.gene015114.t1	AT3G16857	56.410	78	24	1	124	191	139	216	1.37e-19	86.3
MS.gene015114.t1	AT1G49190	30.833	240	111	5	7	191	29	268	2.13e-30	115
MS.gene015114.t1	AT1G67710	39.873	158	42	3	87	191	12	169	3.01e-25	101
MS.gene015114.t1	AT1G49190	38.400	125	77	0	7	131	29	153	7.98e-25	101
MS.gene015114.t1	AT2G46790	34.815	135	85	1	12	143	37	171	5.89e-20	87.0
MS.gene015114.t1	AT2G46790	34.815	135	85	1	12	143	37	171	7.97e-20	86.7
MS.gene015114.t1	AT5G61380	33.871	124	79	1	12	132	19	142	9.23e-20	86.7
MS.gene015114.t1	AT5G24470	34.400	125	79	1	10	131	48	172	1.99e-19	85.5
MS.gene015114.t1	AT2G01760	51.515	66	31	1	67	131	1	66	5.19e-17	77.8
MS.gene015114.t1	AT2G01760	66.667	51	17	0	141	191	134	184	3.12e-16	75.5
MS.gene015114.t1	AT5G02810	36.066	122	75	1	12	130	78	199	8.18e-17	78.2
MS.gene015114.t1	AT5G60100	35.246	122	76	1	12	130	64	185	1.03e-16	77.4
MS.gene015114.t1	AT5G60100	35.246	122	76	1	12	130	64	185	1.03e-16	77.4
MS.gene015114.t1	AT5G60100	35.246	122	76	1	12	130	64	185	1.03e-16	77.4
MS.gene015114.t1	AT5G60100	35.246	122	76	1	12	130	64	185	1.18e-16	77.8
MS.gene015114.t1	AT5G60100	35.246	122	76	1	12	130	64	185	2.09e-16	77.0
MS.gene015114.t1	AT5G60100	35.246	122	76	1	12	130	64	185	2.09e-16	77.0
MS.gene015114.t1	AT5G60100	35.246	122	76	1	12	130	64	185	2.09e-16	77.0
MS.gene015114.t1	AT5G07210	28.659	164	97	4	10	172	14	158	1.07e-14	72.0
MS.gene015114.t1	AT4G18020	33.333	132	79	3	6	130	12	141	6.17e-14	69.7
MS.gene015114.t1	AT4G18020	46.970	66	33	1	128	191	280	345	4.57e-11	61.2
MS.gene015114.t1	AT4G18020	33.333	132	79	3	6	130	12	141	6.17e-14	69.7
MS.gene015114.t1	AT4G18020	46.970	66	33	1	128	191	280	345	4.57e-11	61.2
MS.gene015114.t1	AT4G18020	33.333	132	79	3	6	130	12	141	6.17e-14	69.7
MS.gene015114.t1	AT4G18020	46.970	66	33	1	128	191	280	345	4.57e-11	61.2
MS.gene015114.t1	AT4G18020	33.333	132	79	3	6	130	12	141	6.17e-14	69.7
MS.gene015114.t1	AT4G18020	46.970	66	33	1	128	191	280	345	4.57e-11	61.2
MS.gene015114.t1	AT4G18020	33.333	132	79	3	6	130	12	141	6.17e-14	69.7
MS.gene015114.t1	AT4G18020	46.970	66	33	1	128	191	280	345	4.57e-11	61.2
MS.gene015114.t1	AT4G18020	33.333	132	79	3	6	130	12	141	6.17e-14	69.7
MS.gene015114.t1	AT4G18020	46.970	66	33	1	128	191	280	345	4.57e-11	61.2
MS.gene015114.t1	AT4G18020	33.333	132	79	3	6	130	12	141	6.19e-14	69.7
MS.gene015114.t1	AT4G18020	46.970	66	33	1	128	191	280	345	4.44e-11	61.6
MS.gene015114.t1	AT4G18020	33.333	132	79	3	6	130	12	141	6.19e-14	69.7
MS.gene015114.t1	AT4G18020	46.970	66	33	1	128	191	280	345	4.44e-11	61.6
MS.gene015114.t1	AT4G18020	33.333	132	79	3	6	130	12	141	6.19e-14	69.7
MS.gene015114.t1	AT4G18020	46.970	66	33	1	128	191	280	345	4.44e-11	61.6
MS.gene015114.t1	AT4G18020	33.333	132	79	3	6	130	12	141	6.19e-14	69.7
MS.gene015114.t1	AT4G18020	46.970	66	33	1	128	191	280	345	4.44e-11	61.6
MS.gene015114.t1	AT4G18020	33.333	132	79	3	6	130	12	141	6.19e-14	69.7
MS.gene015114.t1	AT4G18020	46.970	66	33	1	128	191	280	345	4.44e-11	61.6
MS.gene015114.t1	AT5G44190	57.692	52	22	0	140	191	145	196	4.52e-13	67.0
MS.gene015114.t1	AT5G44190	57.692	52	22	0	140	191	145	196	5.60e-13	66.6
MS.gene015114.t1	AT5G07210	27.326	172	97	5	10	172	14	166	4.73e-12	64.3
MS.gene015114.t1	AT3G46640	52.542	59	26	1	135	191	135	193	1.29e-11	62.8
MS.gene015114.t1	AT3G46640	52.542	59	26	1	135	191	135	193	1.29e-11	62.8
MS.gene015114.t1	AT3G46640	52.542	59	26	1	135	191	135	193	1.31e-11	62.8
MS.gene015114.t1	AT2G40970	52.941	51	24	0	141	191	104	154	3.03e-11	60.8
MS.gene015114.t1	AT5G59570	50.847	59	27	1	135	191	132	190	3.25e-11	61.2
MS.gene015114.t1	AT5G59570	50.847	59	27	1	135	191	132	190	3.25e-11	61.2
MS.gene015114.t1	AT2G20570	52.830	53	25	0	139	191	150	202	4.39e-11	61.2
MS.gene015114.t1	AT2G20570	60.000	45	18	0	147	191	174	218	7.05e-11	60.8

Find 51 sgRNAs with CRISPR-Local

Find 89 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CCATGGTGCCTCTGAGTTTC+TGG	0.051652	3.2:-85207393	MS.gene015114:CDS
GCTGTACCCGAAAAGATTCT+TGG	0.366985	3.2:-85206942	MS.gene015114:CDS
AGGACGTGGGAAGCCATCTC+CGG	0.385064	3.2:-85206890	MS.gene015114:CDS
TAGAGGAGCTAAAGACCATT+TGG	0.400234	3.2:-85207355	MS.gene015114:CDS
CCATTTGGCAGCATGTAATT+CGG	0.418909	3.2:-85207340	MS.gene015114:CDS
AGAAGAAGTCCCAGTCTGTT+TGG	0.426238	3.2:-85207286	MS.gene015114:CDS
TTCGATCGGAAACCGGTCAC+TGG	0.435936	3.2:+85208326	None:intergenic
GGAACTTGAGACGGACCTTC+CGG	0.436170	3.2:-85207544	MS.gene015114:CDS
GGTGAAACCTGTGAGATTAG+AGG	0.438440	3.2:-85207372	MS.gene015114:CDS
CACGCATTTCGATCGGAAAC+CGG	0.444933	3.2:+85208319	None:intergenic
GTTGCTGCTGTTAATCAGTT+AGG	0.449852	3.2:-85207239	MS.gene015114:CDS
CCGAATTACATGCTGCCAAA+TGG	0.458584	3.2:+85207340	None:intergenic
AGCTTAAGTCCATCCATGTC+AGG	0.462326	3.2:+85207579	None:intergenic
GGACGTGGGAAGCCATCTCC+GGG	0.474388	3.2:-85206889	MS.gene015114:CDS
TTTAGCTCCTCTAATCTCAC+AGG	0.481770	3.2:+85207365	None:intergenic
AAATATTACAAGGGAGGACG+TGG	0.493697	3.2:-85206904	MS.gene015114:CDS
ACTAGAAAATTGCCCGGAGA+TGG	0.513115	3.2:+85206877	None:intergenic
GTCCCAGTCTGTTTGGTCTG+TGG	0.513687	3.2:-85207279	MS.gene015114:CDS
ATGCGTGTTCTCGCCGTCGA+TGG	0.517179	3.2:-85208303	MS.gene015114:CDS
CGATAATGAGCTAGTGATGA+AGG	0.518138	3.2:-85207423	MS.gene015114:CDS
GCTCCACAGACCAAACAGAC+TGG	0.522152	3.2:+85207276	None:intergenic
TTCTAAATCCGAGAGATAAG+TGG	0.525410	3.2:+85208275	None:intergenic
GGGACTTCTTCTGAGCTGAT+AGG	0.528115	3.2:+85207297	None:intergenic
GGTGCACATCAGCGATTACC+AGG	0.528972	3.2:+85207604	None:intergenic
ACTTAAGCTGCTTGAACTTG+TGG	0.534364	3.2:-85207565	MS.gene015114:CDS
CTCCACAGACCAAACAGACT+GGG	0.537731	3.2:+85207277	None:intergenic
TGGCGATTCCACTTATCTCT+CGG	0.540916	3.2:-85208283	MS.gene015114:CDS
GTGCACCTGCCTGACATGGA+TGG	0.546404	3.2:-85207588	MS.gene015114:CDS
GAACTGAACTTACTTACGAC+CGG	0.554201	3.2:+85207525	None:intergenic
TTATGGATGACTCCAGTGAC+CGG	0.561206	3.2:-85208338	MS.gene015114:CDS
GCATGTAATTCGGAAGAAGA+AGG	0.566666	3.2:-85207330	MS.gene015114:CDS
TGAACTTGTGGAACTTGAGA+CGG	0.569359	3.2:-85207553	MS.gene015114:CDS
TGATGTGCACCTGCCTGACA+TGG	0.573968	3.2:-85207592	MS.gene015114:CDS
TAAGTCCATCCATGTCAGGC+AGG	0.574028	3.2:+85207583	None:intergenic
TGAATGTTGAAAATATTACA+AGG	0.578744	3.2:-85206914	MS.gene015114:CDS
GACCGTGGTATTGACATGAT+CGG	0.585397	3.2:+85208244	None:intergenic
GCGAGAACACGCATTTCGAT+CGG	0.597411	3.2:+85208312	None:intergenic
TAAAGGACTAGAAAATTGCC+CGG	0.605859	3.2:+85206871	None:intergenic
TGAACTTACTTACGACCGGA+AGG	0.625105	3.2:+85207529	None:intergenic
ATAAGTGGAATCGCCATCGA+CGG	0.627981	3.2:+85208290	None:intergenic
CCAGAAACTCAGAGGCACCA+TGG	0.637813	3.2:+85207393	None:intergenic
GAATGTTGAAAATATTACAA+GGG	0.643931	3.2:-85206913	MS.gene015114:CDS
TAACAGCAGCAACAAACTTG+TGG	0.645143	3.2:+85207249	None:intergenic
TCGGAAGAAGAAGGACAATG+AGG	0.649373	3.2:-85207321	MS.gene015114:CDS
TGTTGAAAATATTACAAGGG+AGG	0.651126	3.2:-85206910	MS.gene015114:CDS
AAACAAAGACATGTTTGACC+TGG	0.656788	3.2:-85207622	MS.gene015114:CDS
GTGATGAAGGCAGTTTACCA+TGG	0.674402	3.2:-85207410	MS.gene015114:CDS
CTCCGATCATGTCAATACCA+CGG	0.699650	3.2:-85208246	MS.gene015114:intron
CGTGGTATTGACATGATCGG+AGG	0.711493	3.2:+85208247	None:intergenic
AGGTTTCACCAGAAACTCAG+AGG	0.716031	3.2:+85207385	None:intergenic
AATATTACAAGGGAGGACGT+GGG	0.729612	3.2:-85206903	MS.gene015114:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATGAATAAATCAAATAAAAT+TGG	+	chr3.2:85207017-85207036	None:intergenic	10.0%
!!	TAAAAATGAGAAATAAAATT+CGG	+	chr3.2:85208074-85208093	None:intergenic	10.0%
!!	TGAATAAATCAAATAAAATT+GGG	+	chr3.2:85207016-85207035	None:intergenic	10.0%
!!!	TATGTTATTTATACACATTT+TGG	-	chr3.2:85207390-85207409	MS.gene015114:CDS	15.0%
!!!	TTTAATTTATTTTCAATCTG+AGG	-	chr3.2:85208110-85208129	MS.gene015114:intron	15.0%
!!	AATAAAAATTGTTTGTGTTG+CGG	+	chr3.2:85208027-85208046	None:intergenic	20.0%
!!	GAATGTTGAAAATATTACAA+GGG	-	chr3.2:85208301-85208320	MS.gene015114:CDS	20.0%
!!	TGAAAAAAACTTATGATGAT+AGG	-	chr3.2:85208134-85208153	MS.gene015114:intron	20.0%
!!	TGAATGTTGAAAATATTACA+AGG	-	chr3.2:85208300-85208319	MS.gene015114:CDS	20.0%
!!!	ATGTTATTTATGTATTGTTG+CGG	-	chr3.2:85207516-85207535	MS.gene015114:intron	20.0%
!	ATTGTTCCTATACTATAACA+AGG	+	chr3.2:85207463-85207482	None:intergenic	25.0%
!	CACATTTATAAACACTATAG+AGG	+	chr3.2:85207230-85207249	None:intergenic	25.0%
!	CATGCATTATACACATAAAT+TGG	+	chr3.2:85207049-85207068	None:intergenic	25.0%
!	GAACTTACTTTGAATTCATT+TGG	-	chr3.2:85207284-85207303	MS.gene015114:CDS	25.0%
!	TATGTTTATGTAGAGAGATA+CGG	-	chr3.2:85207094-85207113	MS.gene015114:intron	25.0%
!	TCATGTTAATGTTGTATTAC+TGG	-	chr3.2:85208244-85208263	MS.gene015114:intron	25.0%
!!	CTTTGAATTCATTTGGATTT+TGG	-	chr3.2:85207291-85207310	MS.gene015114:CDS	25.0%
!!!	TGATGTAGATTTTAGTTTGT+TGG	-	chr3.2:85207130-85207149	MS.gene015114:intron	25.0%
	TAATGAAACACTTCATGACA+TGG	+	chr3.2:85208207-85208226	None:intergenic	30.0%
	TGTTGAAAATATTACAAGGG+AGG	-	chr3.2:85208304-85208323	MS.gene015114:CDS	30.0%
!	ATCAAACCAAGAATCTTTTC+GGG	+	chr3.2:85208281-85208300	None:intergenic	30.0%
!	CAAACTCCTTGTTATAGTAT+AGG	-	chr3.2:85207454-85207473	MS.gene015114:intron	30.0%
!	CATCAAACCAAGAATCTTTT+CGG	+	chr3.2:85208282-85208301	None:intergenic	30.0%
!	TGTTGATAAAAAGTTTGACC+TGG	-	chr3.2:85207352-85207371	MS.gene015114:CDS	30.0%
	AAACAAAGACATGTTTGACC+TGG	-	chr3.2:85207592-85207611	MS.gene015114:CDS	35.0%
	AACAAGGAGTTTGTGAAACT+AGG	+	chr3.2:85207447-85207466	None:intergenic	35.0%
	TAATGTTGTATTACTGGCAG+AGG	-	chr3.2:85208250-85208269	MS.gene015114:CDS	35.0%
	TTCTAAATCCGAGAGATAAG+TGG	+	chr3.2:85206942-85206961	None:intergenic	35.0%
!	GTTTGTTGGAAATTCTGCTT+CGG	-	chr3.2:85207144-85207163	MS.gene015114:intron	35.0%
!	TTATGATGATAGGTGCTACA+TGG	-	chr3.2:85208144-85208163	MS.gene015114:intron	35.0%
	AAAAGAAAAGAAGCAGACCG+TGG	+	chr3.2:85206988-85207007	None:intergenic	40.0%
	AAATATTACAAGGGAGGACG+TGG	-	chr3.2:85208310-85208329	MS.gene015114:CDS	40.0%
	AACAGCTAGCGAAGCAAAAA+TGG	-	chr3.2:85207550-85207569	MS.gene015114:CDS	40.0%
	AATATTACAAGGGAGGACGT+GGG	-	chr3.2:85208311-85208330	MS.gene015114:CDS	40.0%
	AATTAACCACCTCAAAGCCA+AGG	+	chr3.2:85207184-85207203	None:intergenic	40.0%
	ACTTAAGCTGCTTGAACTTG+TGG	-	chr3.2:85207649-85207668	MS.gene015114:CDS	40.0%
	ATAAAATTCGGTCAAGCTCG+AGG	+	chr3.2:85208062-85208081	None:intergenic	40.0%
	ATACCATAACAGCGATTACC+AGG	+	chr3.2:85207373-85207392	None:intergenic	40.0%
	CCATTTGGCAGCATGTAATT+CGG	-	chr3.2:85207874-85207893	MS.gene015114:intron	40.0%
	CGATAATGAGCTAGTGATGA+AGG	-	chr3.2:85207791-85207810	MS.gene015114:intron	40.0%
	GAACTGAACTTACTTACGAC+CGG	+	chr3.2:85207692-85207711	None:intergenic	40.0%
	GAGGTCATATCTAAGCAATG+TGG	+	chr3.2:85207211-85207230	None:intergenic	40.0%
	GATCAAAGACTCCTAAGTCA+TGG	-	chr3.2:85207412-85207431	MS.gene015114:CDS	40.0%
	GCATGTAATTCGGAAGAAGA+AGG	-	chr3.2:85207884-85207903	MS.gene015114:intron	40.0%
	GGTCAAACATACCATGACTT+AGG	+	chr3.2:85207426-85207445	None:intergenic	40.0%
	GTTGCTGCTGTTAATCAGTT+AGG	-	chr3.2:85207975-85207994	MS.gene015114:intron	40.0%
	TAACAGCAGCAACAAACTTG+TGG	+	chr3.2:85207968-85207987	None:intergenic	40.0%
	TAGAGGAGCTAAAGACCATT+TGG	-	chr3.2:85207859-85207878	MS.gene015114:intron	40.0%
	TCAAGCTCGAGGAAATTGAT+AGG	+	chr3.2:85208051-85208070	None:intergenic	40.0%
	TGAACTTGTGGAACTTGAGA+CGG	-	chr3.2:85207661-85207680	MS.gene015114:CDS	40.0%
!	TTTAGCTCCTCTAATCTCAC+AGG	+	chr3.2:85207852-85207871	None:intergenic	40.0%
	AGAAGAAGTCCCAGTCTGTT+TGG	-	chr3.2:85207928-85207947	MS.gene015114:intron	45.0%
	AGCTTAAGTCCATCCATGTC+AGG	+	chr3.2:85207638-85207657	None:intergenic	45.0%
	AGGTTTCACCAGAAACTCAG+AGG	+	chr3.2:85207832-85207851	None:intergenic	45.0%
	ATAAGTGGAATCGCCATCGA+CGG	+	chr3.2:85206927-85206946	None:intergenic	45.0%
	CCGAATTACATGCTGCCAAA+TGG	+	chr3.2:85207877-85207896	None:intergenic	45.0%
	CTCCGATCATGTCAATACCA+CGG	-	chr3.2:85206968-85206987	MS.gene015114:intron	45.0%
	GCTGTACCCGAAAAGATTCT+TGG	-	chr3.2:85208272-85208291	MS.gene015114:CDS	45.0%
	GGTGAAACCTGTGAGATTAG+AGG	-	chr3.2:85207842-85207861	MS.gene015114:intron	45.0%
	GTGATGAAGGCAGTTTACCA+TGG	-	chr3.2:85207804-85207823	MS.gene015114:intron	45.0%
	TCGGAAGAAGAAGGACAATG+AGG	-	chr3.2:85207893-85207912	MS.gene015114:intron	45.0%
	TGAACTTACTTACGACCGGA+AGG	+	chr3.2:85207688-85207707	None:intergenic	45.0%
	TGACCTGGTAATCGCTGTTA+TGG	-	chr3.2:85207367-85207386	MS.gene015114:CDS	45.0%
	TGGCGATTCCACTTATCTCT+CGG	-	chr3.2:85206931-85206950	MS.gene015114:CDS	45.0%
	TTGGAAATTCTGCTTCGGTC+CGG	-	chr3.2:85207149-85207168	MS.gene015114:intron	45.0%
!!	GACCGTGGTATTGACATGAT+CGG	+	chr3.2:85206973-85206992	None:intergenic	45.0%
	AAAGCCAAGGCAGCAAATGC+CGG	+	chr3.2:85207171-85207190	None:intergenic	50.0%
	CACGCATTTCGATCGGAAAC+CGG	+	chr3.2:85206898-85206917	None:intergenic	50.0%
	CTCCACAGACCAAACAGACT+GGG	+	chr3.2:85207940-85207959	None:intergenic	50.0%
	GCGAGAACACGCATTTCGAT+CGG	+	chr3.2:85206905-85206924	None:intergenic	50.0%
	GGGACTTCTTCTGAGCTGAT+AGG	+	chr3.2:85207920-85207939	None:intergenic	50.0%
	TAAGTCCATCCATGTCAGGC+AGG	+	chr3.2:85207634-85207653	None:intergenic	50.0%
	TGTTTGTGTTGCGGACAGAG+TGG	+	chr3.2:85208018-85208037	None:intergenic	50.0%
!!	CATTTGCTGCCTTGGCTTTG+AGG	-	chr3.2:85207172-85207191	MS.gene015114:intron	50.0%
!!	CGTGGTATTGACATGATCGG+AGG	+	chr3.2:85206970-85206989	None:intergenic	50.0%
	CCATGGTGCCTCTGAGTTTC+TGG	-	chr3.2:85207821-85207840	MS.gene015114:intron	55.0%
	GCTCCACAGACCAAACAGAC+TGG	+	chr3.2:85207941-85207960	None:intergenic	55.0%
	GGAACTTGAGACGGACCTTC+CGG	-	chr3.2:85207670-85207689	MS.gene015114:CDS	55.0%
	GGTGCACATCAGCGATTACC+AGG	+	chr3.2:85207613-85207632	None:intergenic	55.0%
	GTCCCAGTCTGTTTGGTCTG+TGG	-	chr3.2:85207935-85207954	MS.gene015114:intron	55.0%
	TGATGTGCACCTGCCTGACA+TGG	-	chr3.2:85207622-85207641	MS.gene015114:CDS	55.0%
	TTCGATCGGAAACCGGTCAC+TGG	+	chr3.2:85206891-85206910	None:intergenic	55.0%
!!	CCAGAAACTCAGAGGCACCA+TGG	+	chr3.2:85207824-85207843	None:intergenic	55.0%
!!	TTGCTGCCTTGGCTTTGAGG+TGG	-	chr3.2:85207175-85207194	MS.gene015114:intron	55.0%
	AGGACGTGGGAAGCCATCTC+CGG	-	chr3.2:85208324-85208343	MS.gene015114:CDS	60.0%
	ATGCGTGTTCTCGCCGTCGA+TGG	-	chr3.2:85206911-85206930	MS.gene015114:CDS	60.0%
	GTGCACCTGCCTGACATGGA+TGG	-	chr3.2:85207626-85207645	MS.gene015114:CDS	60.0%
	GGACGTGGGAAGCCATCTCC+GGG	-	chr3.2:85208325-85208344	MS.gene015114:CDS	65.0%
!	CGGTCCGGCATTTGCTGCCT+TGG	-	chr3.2:85207164-85207183	MS.gene015114:intron	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.2	gene	85206878	85208358	85206878	ID=MS.gene015114
chr3.2	mRNA	85206878	85208358	85206878	ID=MS.gene015114.t1;Parent=MS.gene015114
chr3.2	exon	85208247	85208358	85208247	ID=MS.gene015114.t1.exon1;Parent=MS.gene015114.t1
chr3.2	CDS	85208247	85208358	85208247	ID=cds.MS.gene015114.t1;Parent=MS.gene015114.t1
chr3.2	exon	85207538	85207690	85207538	ID=MS.gene015114.t1.exon2;Parent=MS.gene015114.t1
chr3.2	CDS	85207538	85207690	85207538	ID=cds.MS.gene015114.t1;Parent=MS.gene015114.t1
chr3.2	exon	85207231	85207461	85207231	ID=MS.gene015114.t1.exon3;Parent=MS.gene015114.t1
chr3.2	CDS	85207231	85207461	85207231	ID=cds.MS.gene015114.t1;Parent=MS.gene015114.t1
chr3.2	exon	85206878	85206966	85206878	ID=MS.gene015114.t1.exon4;Parent=MS.gene015114.t1
chr3.2	CDS	85206878	85206966	85206878	ID=cds.MS.gene015114.t1;Parent=MS.gene015114.t1

Gene Sequence

>MS.gene015114

ATGGATGACTCCAGTGACCGGTTTCCGATCGAAATGCGTGTTCTCGCCGTCGATGGCGATTCCACTTATCTCTCGGATTTAGAAACTCGCCTCCGATCATGTCAATACCACGGTCTGCTTCTTTTCTTTTTTATGCCCAATTTTATTTGATTTATTCATACATTATGTCCAATTTATGTGTATAATGCATGATGATCATAATTGATAAGTAAATGATATGTTTATGTAGAGAGATACGGTTAATTCTTTTATTGATGTAGATTTTAGTTTGTTGGAAATTCTGCTTCGGTCCGGCATTTGCTGCCTTGGCTTTGAGGTGGTTAATTTAGTCCACATTGCTTAGATATGACCTCTATAGTGTTTATAAATGTGTAATTTCAATTAATATTATAGAAATTCAAACAAAGAACTTACTTTGAATTCATTTGGATTTTGGAATCAATCAAATCTAACTGCGAAATCAAAAAGATGTTGTGTTGATAAAAAGTTTGACCTGGTAATCGCTGTTATGGTATGTTATTTATACACATTTTGGATCAAAGACTCCTAAGTCATGGTATGTTTGACCTAGTTTCACAAACTCCTTGTTATAGTATAGGAACAATATATACACATTTTGCTTGTTCTGAACGATATTTATGTTATTTATGTATTGTTGCGGATTGCAGTAACAACAGCTAGCGAAGCAAAAATGGCATTGACTATGTTGCGAGAAAACAAAGACATGTTTGACCTGGTAATCGCTGATGTGCACCTGCCTGACATGGATGGACTTAAGCTGCTTGAACTTGTGGAACTTGAGACGGACCTTCCGGTCGTAAGTAAGTTCAGTTCTTCATCTTTGTTTTGTTTCTTCATTTTCACTCTCATTTATTCATATAATTTTTTTTATTTCAGTGTTGTCTGAATCTAGCGATAATGAGCTAGTGATGAAGGCAGTTTACCATGGTGCCTCTGAGTTTCTGGTGAAACCTGTGAGATTAGAGGAGCTAAAGACCATTTGGCAGCATGTAATTCGGAAGAAGAAGGACAATGAGGACCTATCAGCTCAGAAGAAGTCCCAGTCTGTTTGGTCTGTGGAGCTGCACCACAAGTTTGTTGCTGCTGTTAATCAGTTAGGCATTGACAGTATGTTCTCCACTCTGTCCGCAACACAAACAATTTTTATTTCCTATCAATTTCCTCGAGCTTGACCGAATTTTATTTCTCATTTTTACATTATCAAAGTGTTTTTTAATTTATTTTCAATCTGAGGTTGAAAAAAACTTATGATGATAGGTGCTACATGGTATAAATTTCATTTCTCAATCATCACTCAAATTTATGCCATGTCATGAAGTGTTTCATTACTGAATTTGAGTGAGTCTCATGTTAATGTTGTATTACTGGCAGAGGCTGTACCCGAAAAGATTCTTGGTTTGATGAATGTTGAAAATATTACAAGGGAGGACGTGGGAAGCCATCTCCGGGCAATTTTCTAG

Protein sequence

>MS.gene015114.t1

MDDSSDRFPIEMRVLAVDGDSTYLSDLETRLRSCQYHVTTASEAKMALTMLRENKDMFDLVIADVHLPDMDGLKLLELVELETDLPVVMLSESSDNELVMKAVYHGASEFLVKPVRLEELKTIWQHVIRKKKDNEDLSAQKKSQSVWSVELHHKFVAAVNQLGIDKAVPEKILGLMNVENITREDVGSHLRAIF