Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015142.t1 | XP_003611755.1 | 81.2 | 250 | 26 | 2 | 1 | 250 | 1 | 229 | 1.80E-103 | 385.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015142.t1 | G7K6Q6 | 81.2 | 250 | 26 | 2 | 1 | 250 | 1 | 229 | 1.3e-103 | 385.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene015142.t1 | TF | Trihelix |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015142.t1 | MTR_5g017500 | 84.800 | 250 | 17 | 3 | 1 | 250 | 1 | 229 | 8.14e-146 | 407 |
| MS.gene015142.t1 | MTR_4g117990 | 45.872 | 109 | 57 | 1 | 14 | 122 | 36 | 142 | 4.86e-27 | 107 |
| MS.gene015142.t1 | MTR_7g081190 | 49.020 | 102 | 49 | 2 | 19 | 118 | 43 | 143 | 1.13e-21 | 92.8 |
| MS.gene015142.t1 | MTR_1g061600 | 36.000 | 100 | 58 | 2 | 22 | 121 | 133 | 226 | 4.70e-15 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015142.t1 | AT3G24860 | 34.201 | 269 | 134 | 6 | 11 | 249 | 54 | 309 | 9.84e-44 | 150 |
| MS.gene015142.t1 | AT2G44730 | 44.348 | 115 | 54 | 2 | 9 | 119 | 51 | 159 | 1.35e-22 | 95.5 |
| MS.gene015142.t1 | AT3G10030 | 35.644 | 101 | 59 | 2 | 22 | 122 | 161 | 255 | 1.29e-14 | 73.2 |
| MS.gene015142.t1 | AT3G10030 | 35.644 | 101 | 59 | 2 | 22 | 122 | 161 | 255 | 1.42e-14 | 73.2 |
| MS.gene015142.t1 | AT3G54390 | 28.390 | 236 | 130 | 8 | 22 | 233 | 38 | 258 | 1.63e-14 | 72.0 |
| MS.gene015142.t1 | AT3G54390 | 28.270 | 237 | 131 | 8 | 22 | 234 | 54 | 275 | 2.02e-14 | 72.0 |
| MS.gene015142.t1 | AT3G58630 | 30.769 | 117 | 68 | 2 | 22 | 128 | 26 | 139 | 1.13e-13 | 69.7 |
| MS.gene015142.t1 | AT3G58630 | 30.769 | 117 | 68 | 2 | 22 | 128 | 26 | 139 | 1.19e-13 | 69.7 |
| MS.gene015142.t1 | AT3G14180 | 34.043 | 94 | 57 | 3 | 22 | 115 | 84 | 172 | 7.20e-11 | 62.0 |
| MS.gene015142.t1 | AT5G05550 | 25.692 | 253 | 151 | 9 | 1 | 239 | 1 | 230 | 7.43e-11 | 60.8 |
| MS.gene015142.t1 | AT5G05550 | 25.692 | 253 | 151 | 9 | 1 | 239 | 1 | 230 | 7.80e-11 | 60.8 |
| MS.gene015142.t1 | AT5G05550 | 25.692 | 253 | 151 | 9 | 1 | 239 | 1 | 230 | 9.46e-11 | 60.8 |
Find 78 sgRNAs with CRISPR-Local
Find 88 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCTTGTTACTGTTGGTTTC+TGG | 0.153076 | 5.1:-9705689 | None:intergenic |
| GTAAGCTCGAATGAGGTTAA+TGG | 0.275887 | 5.1:-9705286 | None:intergenic |
| GATTCTATTGGAAAGGCATT+TGG | 0.282980 | 5.1:+9705927 | MS.gene015142:CDS |
| TGGAGGATTGTTGATTCTAT+TGG | 0.285128 | 5.1:+9705915 | MS.gene015142:CDS |
| ACGACATTGAAGAGCGGTTT+TGG | 0.311108 | 5.1:-9705415 | None:intergenic |
| GAATGAGGTTAATGGTTTCT+TGG | 0.338119 | 5.1:-9705278 | None:intergenic |
| TTCTTGGTGGGTCCATGGGA+TGG | 0.355899 | 5.1:-9705262 | None:intergenic |
| CCGTCGCTATCGTCGGAGAT+AGG | 0.363885 | 5.1:-9705600 | None:intergenic |
| TCTTGGTGGGTCCATGGGAT+GGG | 0.368132 | 5.1:-9705261 | None:intergenic |
| GATTAGAGATGGAGAATAAG+AGG | 0.371813 | 5.1:+9705868 | MS.gene015142:CDS |
| ATTCTATTGGAAAGGCATTT+GGG | 0.373738 | 5.1:+9705928 | MS.gene015142:CDS |
| ATGGTTTCTTGGTGGGTCCA+TGG | 0.378553 | 5.1:-9705267 | None:intergenic |
| TTTCAGATCGGTGGCGTTGA+CGG | 0.386482 | 5.1:-9705455 | None:intergenic |
| GCCCACTCCGCGGCAGTCAA+TGG | 0.394607 | 5.1:+9705337 | MS.gene015142:CDS |
| ATGGGTTGAGGTTTCTTTGT+GGG | 0.395257 | 5.1:-9705243 | None:intergenic |
| CCGCCGGTTCTTCTCGATCC+TGG | 0.419395 | 5.1:+9705502 | MS.gene015142:CDS |
| TGCAGAGAGGATTGTAGGGT+TGG | 0.427539 | 5.1:+9705803 | MS.gene015142:CDS |
| GAAAGAGGTCTGACGGAGAT+AGG | 0.427949 | 5.1:-9705567 | None:intergenic |
| TGGGTCCATGGGATGGGTTG+AGG | 0.432168 | 5.1:-9705255 | None:intergenic |
| TGGTTTCTTGGTGGGTCCAT+GGG | 0.436356 | 5.1:-9705266 | None:intergenic |
| ATAGTGCTGCTAGGTCTGTT+AGG | 0.441997 | 5.1:+9705640 | MS.gene015142:CDS |
| TAAGAGAATACCATTTCTCT+TGG | 0.442052 | 5.1:-9705308 | None:intergenic |
| GGAGGAGGAAGACGAAGAGG+AGG | 0.442580 | 5.1:+9705740 | MS.gene015142:CDS |
| CCCATTGACTGCCGCGGAGT+GGG | 0.449342 | 5.1:-9705338 | None:intergenic |
| TTCGAGCTTACCAAGAGAAA+TGG | 0.455451 | 5.1:+9705298 | MS.gene015142:CDS |
| AACTGATGATGAAGAGGAGG+AGG | 0.459365 | 5.1:+9705725 | MS.gene015142:CDS |
| GAGGTTAATGGTTTCTTGGT+GGG | 0.461484 | 5.1:-9705274 | None:intergenic |
| CCCACTCCGCGGCAGTCAAT+GGG | 0.462147 | 5.1:+9705338 | MS.gene015142:CDS |
| CGTTGTTGTCTTGTTACTGT+TGG | 0.464913 | 5.1:-9705696 | None:intergenic |
| AGAGAGGTTTAGATTAGAGA+TGG | 0.466781 | 5.1:+9705857 | MS.gene015142:CDS |
| GATGGGTTGAGGTTTCTTTG+TGG | 0.466878 | 5.1:-9705244 | None:intergenic |
| TTGAGGTTTCTTTGTGGGAA+GGG | 0.468718 | 5.1:-9705238 | None:intergenic |
| CTGCCAGGATCGAGAAGAAC+CGG | 0.473658 | 5.1:-9705505 | None:intergenic |
| TCCCATTGACTGCCGCGGAG+TGG | 0.479922 | 5.1:-9705339 | None:intergenic |
| GTATGATACTTGAATCTCAA+TGG | 0.493726 | 5.1:+9705895 | MS.gene015142:CDS |
| GAGGAGGAAGACGAAGAGGA+GGG | 0.496326 | 5.1:+9705741 | MS.gene015142:CDS |
| TCTCTTGGTAAGCTCGAATG+AGG | 0.503486 | 5.1:-9705293 | None:intergenic |
| TGAGGTTAATGGTTTCTTGG+TGG | 0.505014 | 5.1:-9705275 | None:intergenic |
| CGTCGCTATCGTCGGAGATA+GGG | 0.505081 | 5.1:-9705599 | None:intergenic |
| GGAAGGGAAAGAGTGAGTTC+TGG | 0.514086 | 5.1:-9705222 | None:intergenic |
| GGTCTGACGGAGATAGGTAA+AGG | 0.526532 | 5.1:-9705561 | None:intergenic |
| GATTGTTGATTCTATTGGAA+AGG | 0.528242 | 5.1:+9705920 | MS.gene015142:CDS |
| AGACGAAGAGGAGGGAGTGA+TGG | 0.530323 | 5.1:+9705749 | MS.gene015142:CDS |
| GTCTGACGGAGATAGGTAAA+GGG | 0.538000 | 5.1:-9705560 | None:intergenic |
| TCTTCAATGTCGTCATAAGA+TGG | 0.539576 | 5.1:+9705425 | MS.gene015142:CDS |
| ATAGGGTGCTTCTGAGAAAG+AGG | 0.554837 | 5.1:-9705582 | None:intergenic |
| CCGACGATAGCGACGGTGAG+AGG | 0.555103 | 5.1:+9705607 | MS.gene015142:CDS |
| TAAGAAGATGGAGATGATGA+AGG | 0.556347 | 5.1:+9705830 | MS.gene015142:CDS |
| AGAGGAGGAGGAAGACGAAG+AGG | 0.557060 | 5.1:+9705737 | MS.gene015142:CDS |
| CGGCAGTCAATGGGAAGAAG+TGG | 0.558439 | 5.1:+9705347 | MS.gene015142:CDS |
| GTTGAGGTTTCTTTGTGGGA+AGG | 0.565690 | 5.1:-9705239 | None:intergenic |
| GGATCGAGAAGAACCGGCGG+AGG | 0.569200 | 5.1:-9705499 | None:intergenic |
| AGGGTTGGAAAATAAGAAGA+TGG | 0.571203 | 5.1:+9705818 | MS.gene015142:CDS |
| AGAAACCTCAACCCATCCCA+TGG | 0.573775 | 5.1:+9705250 | MS.gene015142:CDS |
| CTTCTTCCCATTGACTGCCG+CGG | 0.577676 | 5.1:-9705344 | None:intergenic |
| CTGCTAGGTCTGTTAGGTCA+AGG | 0.578720 | 5.1:+9705646 | MS.gene015142:CDS |
| CCTCTCACCGTCGCTATCGT+CGG | 0.582059 | 5.1:-9705607 | None:intergenic |
| CTCACCGCTACTTCCTCCGC+CGG | 0.582798 | 5.1:+9705486 | MS.gene015142:CDS |
| CTTCTGAGAAAGAGGTCTGA+CGG | 0.593494 | 5.1:-9705574 | None:intergenic |
| CGGAGGAAGTAGCGGTGAGG+CGG | 0.599547 | 5.1:-9705482 | None:intergenic |
| AGTGAGTTCTGGTGAAGCGG+TGG | 0.606604 | 5.1:-9705211 | None:intergenic |
| CATGAGACGAAAATACTGCC+AGG | 0.607104 | 5.1:-9705520 | None:intergenic |
| AAGAGTGAGTTCTGGTGAAG+CGG | 0.610541 | 5.1:-9705214 | None:intergenic |
| AGAACCGGCGGAGGAAGTAG+CGG | 0.637741 | 5.1:-9705490 | None:intergenic |
| AGATGATGAAGGAAACAGAG+AGG | 0.638850 | 5.1:+9705841 | MS.gene015142:CDS |
| TGATGAAACTGATGATGAAG+AGG | 0.652723 | 5.1:+9705719 | MS.gene015142:CDS |
| CTCATGGATGATCTTGAACG+CGG | 0.658671 | 5.1:+9705537 | MS.gene015142:CDS |
| TGATACTTGAATCTCAATGG+AGG | 0.662965 | 5.1:+9705898 | MS.gene015142:CDS |
| TGAAACTGATGATGAAGAGG+AGG | 0.676552 | 5.1:+9705722 | MS.gene015142:CDS |
| CTTATGACGACATTGAAGAG+CGG | 0.678566 | 5.1:-9705421 | None:intergenic |
| CTTAAACGTGGCCCACTCCG+CGG | 0.683812 | 5.1:+9705327 | MS.gene015142:CDS |
| CCTATCTCCGACGATAGCGA+CGG | 0.701116 | 5.1:+9705600 | MS.gene015142:CDS |
| CCAGGATCGAGAAGAACCGG+CGG | 0.705218 | 5.1:-9705502 | None:intergenic |
| GTAATCGTAGCCGCAACGAG+CGG | 0.705311 | 5.1:-9705382 | None:intergenic |
| CGGCGGAGGAAGTAGCGGTG+AGG | 0.714161 | 5.1:-9705485 | None:intergenic |
| AAATGGTATTCTCTTAAACG+TGG | 0.727462 | 5.1:+9705315 | MS.gene015142:CDS |
| GATGGCGAAGAGTTTGACAG+CGG | 0.738106 | 5.1:+9705767 | MS.gene015142:CDS |
| GTTGTCGTAGCCGCTCGTTG+CGG | 0.744946 | 5.1:+9705372 | MS.gene015142:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| AAATGGTATTCTCTTAAACG+TGG | + | chr5.1:9705315-9705334 | MS.gene015142:CDS | 30.0% | |
| GTATGATACTTGAATCTCAA+TGG | + | chr5.1:9705895-9705914 | MS.gene015142:CDS | 30.0% | |
| TAAGAGAATACCATTTCTCT+TGG | - | chr5.1:9705311-9705330 | None:intergenic | 30.0% | |
| !! | ATTCTATTGGAAAGGCATTT+GGG | + | chr5.1:9705928-9705947 | MS.gene015142:CDS | 30.0% |
| !! | GATTGTTGATTCTATTGGAA+AGG | + | chr5.1:9705920-9705939 | MS.gene015142:CDS | 30.0% |
| AGAGAGGTTTAGATTAGAGA+TGG | + | chr5.1:9705857-9705876 | MS.gene015142:CDS | 35.0% | |
| AGGGTTGGAAAATAAGAAGA+TGG | + | chr5.1:9705818-9705837 | MS.gene015142:CDS | 35.0% | |
| GAATGAGGTTAATGGTTTCT+TGG | - | chr5.1:9705281-9705300 | None:intergenic | 35.0% | |
| GATTAGAGATGGAGAATAAG+AGG | + | chr5.1:9705868-9705887 | MS.gene015142:CDS | 35.0% | |
| TAAGAAGATGGAGATGATGA+AGG | + | chr5.1:9705830-9705849 | MS.gene015142:CDS | 35.0% | |
| TCTTCAATGTCGTCATAAGA+TGG | + | chr5.1:9705425-9705444 | MS.gene015142:CDS | 35.0% | |
| TGATACTTGAATCTCAATGG+AGG | + | chr5.1:9705898-9705917 | MS.gene015142:CDS | 35.0% | |
| ! | TGATGAAACTGATGATGAAG+AGG | + | chr5.1:9705719-9705738 | MS.gene015142:CDS | 35.0% |
| !! | GATTCTATTGGAAAGGCATT+TGG | + | chr5.1:9705927-9705946 | MS.gene015142:CDS | 35.0% |
| !! | TGGAGGATTGTTGATTCTAT+TGG | + | chr5.1:9705915-9705934 | MS.gene015142:CDS | 35.0% |
| AGATGATGAAGGAAACAGAG+AGG | + | chr5.1:9705841-9705860 | MS.gene015142:CDS | 40.0% | |
| CTTATGACGACATTGAAGAG+CGG | - | chr5.1:9705424-9705443 | None:intergenic | 40.0% | |
| GAGGTTAATGGTTTCTTGGT+GGG | - | chr5.1:9705277-9705296 | None:intergenic | 40.0% | |
| GTAAGCTCGAATGAGGTTAA+TGG | - | chr5.1:9705289-9705308 | None:intergenic | 40.0% | |
| TGAGGTTAATGGTTTCTTGG+TGG | - | chr5.1:9705278-9705297 | None:intergenic | 40.0% | |
| TTCGAGCTTACCAAGAGAAA+TGG | + | chr5.1:9705298-9705317 | MS.gene015142:CDS | 40.0% | |
| TTGAGGTTTCTTTGTGGGAA+GGG | - | chr5.1:9705241-9705260 | None:intergenic | 40.0% | |
| ! | AGTTGAGAAGTTTTGCAGAG+AGG | + | chr5.1:9705790-9705809 | MS.gene015142:CDS | 40.0% |
| ! | AGTTTTGCAGAGAGGATTGT+AGG | + | chr5.1:9705798-9705817 | MS.gene015142:CDS | 40.0% |
| ! | ATGGGTTGAGGTTTCTTTGT+GGG | - | chr5.1:9705246-9705265 | None:intergenic | 40.0% |
| ! | CGTTGTTGTCTTGTTACTGT+TGG | - | chr5.1:9705699-9705718 | None:intergenic | 40.0% |
| ! | GTTTTGCAGAGAGGATTGTA+GGG | + | chr5.1:9705799-9705818 | MS.gene015142:CDS | 40.0% |
| ! | TGAAAAAGCATAGTGCTGCT+AGG | + | chr5.1:9705631-9705650 | MS.gene015142:CDS | 40.0% |
| ! | TGAAACTGATGATGAAGAGG+AGG | + | chr5.1:9705722-9705741 | MS.gene015142:CDS | 40.0% |
| !! | GTCTTGTTACTGTTGGTTTC+TGG | - | chr5.1:9705692-9705711 | None:intergenic | 40.0% |
| !!! | ATTGAAGAGCGGTTTTGGAA+GGG | - | chr5.1:9705413-9705432 | None:intergenic | 40.0% |
| CATGAGACGAAAATACTGCC+AGG | - | chr5.1:9705523-9705542 | None:intergenic | 45.0% | |
| CTCATGGATGATCTTGAACG+CGG | + | chr5.1:9705537-9705556 | MS.gene015142:CDS | 45.0% | |
| GTCTGACGGAGATAGGTAAA+GGG | - | chr5.1:9705563-9705582 | None:intergenic | 45.0% | |
| GTTGAGGTTTCTTTGTGGGA+AGG | - | chr5.1:9705242-9705261 | None:intergenic | 45.0% | |
| TCTCTTGGTAAGCTCGAATG+AGG | - | chr5.1:9705296-9705315 | None:intergenic | 45.0% | |
| ! | AACTGATGATGAAGAGGAGG+AGG | + | chr5.1:9705725-9705744 | MS.gene015142:CDS | 45.0% |
| ! | AAGAGTGAGTTCTGGTGAAG+CGG | - | chr5.1:9705217-9705236 | None:intergenic | 45.0% |
| ! | ACGACATTGAAGAGCGGTTT+TGG | - | chr5.1:9705418-9705437 | None:intergenic | 45.0% |
| ! | ATAGGGTGCTTCTGAGAAAG+AGG | - | chr5.1:9705585-9705604 | None:intergenic | 45.0% |
| ! | ATAGTGCTGCTAGGTCTGTT+AGG | + | chr5.1:9705640-9705659 | MS.gene015142:CDS | 45.0% |
| ! | CTGGCAGTATTTTCGTCTCA+TGG | + | chr5.1:9705521-9705540 | MS.gene015142:CDS | 45.0% |
| ! | CTTCTGAGAAAGAGGTCTGA+CGG | - | chr5.1:9705577-9705596 | None:intergenic | 45.0% |
| !! | GATGGGTTGAGGTTTCTTTG+TGG | - | chr5.1:9705247-9705266 | None:intergenic | 45.0% |
| !! | TGAGGCGGTGTTTTTCAGAT+CGG | - | chr5.1:9705470-9705489 | None:intergenic | 45.0% |
| !!! | CATTGAAGAGCGGTTTTGGA+AGG | - | chr5.1:9705414-9705433 | None:intergenic | 45.0% |
| AGAAACCTCAACCCATCCCA+TGG | + | chr5.1:9705250-9705269 | MS.gene015142:CDS | 50.0% | |
| CTGCTAGGTCTGTTAGGTCA+AGG | + | chr5.1:9705646-9705665 | MS.gene015142:CDS | 50.0% | |
| GAAAGAGGTCTGACGGAGAT+AGG | - | chr5.1:9705570-9705589 | None:intergenic | 50.0% | |
| GATGGCGAAGAGTTTGACAG+CGG | + | chr5.1:9705767-9705786 | MS.gene015142:CDS | 50.0% | |
| GGAAGGGAAAGAGTGAGTTC+TGG | - | chr5.1:9705225-9705244 | None:intergenic | 50.0% | |
| GGTCTGACGGAGATAGGTAA+AGG | - | chr5.1:9705564-9705583 | None:intergenic | 50.0% | |
| TGCAGAGAGGATTGTAGGGT+TGG | + | chr5.1:9705803-9705822 | MS.gene015142:CDS | 50.0% | |
| ! | ATGGTTTCTTGGTGGGTCCA+TGG | - | chr5.1:9705270-9705289 | None:intergenic | 50.0% |
| ! | TGGTTTCTTGGTGGGTCCAT+GGG | - | chr5.1:9705269-9705288 | None:intergenic | 50.0% |
| ! | TTTCAGATCGGTGGCGTTGA+CGG | - | chr5.1:9705458-9705477 | None:intergenic | 50.0% |
| AGACGAAGAGGAGGGAGTGA+TGG | + | chr5.1:9705749-9705768 | MS.gene015142:CDS | 55.0% | |
| AGAGGAGGAGGAAGACGAAG+AGG | + | chr5.1:9705737-9705756 | MS.gene015142:CDS | 55.0% | |
| CCTATCTCCGACGATAGCGA+CGG | + | chr5.1:9705600-9705619 | MS.gene015142:CDS | 55.0% | |
| CGGCAGTCAATGGGAAGAAG+TGG | + | chr5.1:9705347-9705366 | MS.gene015142:CDS | 55.0% | |
| CGTCGCTATCGTCGGAGATA+GGG | - | chr5.1:9705602-9705621 | None:intergenic | 55.0% | |
| CTGCCAGGATCGAGAAGAAC+CGG | - | chr5.1:9705508-9705527 | None:intergenic | 55.0% | |
| GAGGAGGAAGACGAAGAGGA+GGG | + | chr5.1:9705741-9705760 | MS.gene015142:CDS | 55.0% | |
| GTAATCGTAGCCGCAACGAG+CGG | - | chr5.1:9705385-9705404 | None:intergenic | 55.0% | |
| ! | AGTGAGTTCTGGTGAAGCGG+TGG | - | chr5.1:9705214-9705233 | None:intergenic | 55.0% |
| ! | CTTCTTCCCATTGACTGCCG+CGG | - | chr5.1:9705347-9705366 | None:intergenic | 55.0% |
| ! | TCTTGGTGGGTCCATGGGAT+GGG | - | chr5.1:9705264-9705283 | None:intergenic | 55.0% |
| ! | TTCTTGGTGGGTCCATGGGA+TGG | - | chr5.1:9705265-9705284 | None:intergenic | 55.0% |
| !! | GGCGGTGTTTTTCAGATCGG+TGG | - | chr5.1:9705467-9705486 | None:intergenic | 55.0% |
| !!! | GAAGAGCGGTTTTGGAAGGG+TGG | - | chr5.1:9705410-9705429 | None:intergenic | 55.0% |
| AGAACCGGCGGAGGAAGTAG+CGG | - | chr5.1:9705493-9705512 | None:intergenic | 60.0% | |
| CCAGGATCGAGAAGAACCGG+CGG | - | chr5.1:9705505-9705524 | None:intergenic | 60.0% | |
| CCGTCGCTATCGTCGGAGAT+AGG | - | chr5.1:9705603-9705622 | None:intergenic | 60.0% | |
| CCTCTCACCGTCGCTATCGT+CGG | - | chr5.1:9705610-9705629 | None:intergenic | 60.0% | |
| CTTAAACGTGGCCCACTCCG+CGG | + | chr5.1:9705327-9705346 | MS.gene015142:CDS | 60.0% | |
| GGAGGAGGAAGACGAAGAGG+AGG | + | chr5.1:9705740-9705759 | MS.gene015142:CDS | 60.0% | |
| GTTGTCGTAGCCGCTCGTTG+CGG | + | chr5.1:9705372-9705391 | MS.gene015142:CDS | 60.0% | |
| !! | TGGGTCCATGGGATGGGTTG+AGG | - | chr5.1:9705258-9705277 | None:intergenic | 60.0% |
| CCCACTCCGCGGCAGTCAAT+GGG | + | chr5.1:9705338-9705357 | MS.gene015142:CDS | 65.0% | |
| CCGACGATAGCGACGGTGAG+AGG | + | chr5.1:9705607-9705626 | MS.gene015142:CDS | 65.0% | |
| CGGAGGAAGTAGCGGTGAGG+CGG | - | chr5.1:9705485-9705504 | None:intergenic | 65.0% | |
| CTCACCGCTACTTCCTCCGC+CGG | + | chr5.1:9705486-9705505 | MS.gene015142:CDS | 65.0% | |
| GGATCGAGAAGAACCGGCGG+AGG | - | chr5.1:9705502-9705521 | None:intergenic | 65.0% | |
| ! | CCCATTGACTGCCGCGGAGT+GGG | - | chr5.1:9705341-9705360 | None:intergenic | 65.0% |
| ! | TCCCATTGACTGCCGCGGAG+TGG | - | chr5.1:9705342-9705361 | None:intergenic | 65.0% |
| !! | CCGCCGGTTCTTCTCGATCC+TGG | + | chr5.1:9705502-9705521 | MS.gene015142:CDS | 65.0% |
| CGGCGGAGGAAGTAGCGGTG+AGG | - | chr5.1:9705488-9705507 | None:intergenic | 70.0% | |
| GCCCACTCCGCGGCAGTCAA+TGG | + | chr5.1:9705337-9705356 | MS.gene015142:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 9705207 | 9705959 | 9705207 | ID=MS.gene015142 |
| chr5.1 | mRNA | 9705207 | 9705959 | 9705207 | ID=MS.gene015142.t1;Parent=MS.gene015142 |
| chr5.1 | exon | 9705207 | 9705959 | 9705207 | ID=MS.gene015142.t1.exon1;Parent=MS.gene015142.t1 |
| chr5.1 | CDS | 9705207 | 9705959 | 9705207 | ID=cds.MS.gene015142.t1;Parent=MS.gene015142.t1 |
| Gene Sequence |
| Protein sequence |
