AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene015207

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene015207.t1 MTR_5g016510 97.196 321 4 2 1 321 1 316 0.0 622
MS.gene015207.t1 MTR_4g094982 53.636 330 83 10 1 320 1 270 2.86e-104 306
MS.gene015207.t1 MTR_6g015455 86.726 113 15 0 1 113 1 113 4.73e-64 219
MS.gene015207.t1 MTR_3g101290 74.766 107 27 0 1 107 33 139 1.53e-56 183
MS.gene015207.t1 MTR_5g082910 39.145 304 140 8 2 298 16 281 3.42e-54 179
MS.gene015207.t1 MTR_4g019370 68.932 103 32 0 3 105 36 138 2.94e-47 162
MS.gene015207.t1 MTR_5g041570 56.436 101 44 0 5 105 134 234 3.15e-38 140
MS.gene015207.t1 MTR_4g082040 55.446 101 45 0 5 105 105 205 9.08e-38 139
MS.gene015207.t1 MTR_3g110028 42.424 165 82 3 4 159 84 244 1.25e-36 140
MS.gene015207.t1 MTR_1g026870 54.206 107 49 0 4 110 84 190 1.36e-36 139
MS.gene015207.t1 MTR_6g027370 39.506 162 91 2 4 162 98 255 2.18e-36 134
MS.gene015207.t1 MTR_7g061330 57.843 102 43 0 4 105 112 213 3.64e-36 137
MS.gene015207.t1 MTR_7g461410 57.843 102 43 0 4 105 112 213 3.64e-36 137
MS.gene015207.t1 MTR_7g061330 57.843 102 43 0 4 105 76 177 5.16e-36 136
MS.gene015207.t1 MTR_7g086960 46.617 133 62 2 5 128 89 221 3.81e-35 130
MS.gene015207.t1 MTR_6g074860 54.000 100 46 0 5 104 4 103 5.45e-35 127
MS.gene015207.t1 MTR_3g089045 56.436 101 44 0 5 105 16 116 1.22e-34 128
MS.gene015207.t1 MTR_3g077650 52.885 104 49 0 4 107 180 283 2.23e-33 128
MS.gene015207.t1 MTR_4g105660 52.885 104 49 0 4 107 179 282 2.72e-33 127
MS.gene015207.t1 MTR_3g461490 50.459 109 53 1 5 112 14 122 4.54e-33 124
MS.gene015207.t1 MTR_5g042030 50.435 115 56 1 5 118 9 123 7.31e-33 123
MS.gene015207.t1 MTR_7g037260 51.961 102 49 0 4 105 144 245 1.49e-31 121
MS.gene015207.t1 MTR_7g037130 50.000 106 51 1 1 106 141 244 2.42e-31 120
MS.gene015207.t1 MTR_5g070020 48.077 104 54 0 4 107 121 224 2.57e-31 120
MS.gene015207.t1 MTR_3g052450 53.922 102 46 1 5 105 42 143 2.69e-31 123
MS.gene015207.t1 MTR_5g049190 47.115 104 55 0 4 107 18 121 3.28e-31 117
MS.gene015207.t1 MTR_4g029540 49.606 127 60 3 5 129 12 136 4.11e-31 119
MS.gene015207.t1 MTR_5g029840 50.459 109 53 1 5 112 14 122 5.32e-31 119
MS.gene015207.t1 MTR_7g451170 50.962 104 51 0 2 105 188 291 6.82e-31 120
MS.gene015207.t1 MTR_3g463400 49.038 104 53 0 4 107 132 235 8.92e-31 120
MS.gene015207.t1 MTR_3g052430 52.941 102 47 1 5 105 43 144 1.71e-30 121
MS.gene015207.t1 MTR_8g095390 50.427 117 57 1 5 120 14 130 2.24e-30 117
MS.gene015207.t1 MTR_4g088015 51.485 101 49 0 4 104 220 320 3.88e-30 119
MS.gene015207.t1 MTR_4g478180 51.818 110 50 2 5 112 15 123 4.91e-30 117
MS.gene015207.t1 MTR_5g010650 53.061 98 46 0 2 99 107 204 5.40e-30 119
MS.gene015207.t1 MTR_1g100653 52.941 102 47 1 5 105 14 115 6.68e-30 115
MS.gene015207.t1 MTR_6g012690 46.789 109 57 1 5 112 14 122 8.22e-30 116
MS.gene015207.t1 MTR_4g091490 46.789 109 57 1 5 112 15 123 1.11e-29 116
MS.gene015207.t1 MTR_8g006470 54.902 102 44 2 5 104 12 113 1.14e-29 114
MS.gene015207.t1 MTR_5g007370 50.909 110 51 2 5 112 14 122 1.37e-29 115
MS.gene015207.t1 MTR_2g011660 47.706 109 56 1 5 112 15 123 1.97e-29 115
MS.gene015207.t1 MTR_1g085040 50.427 117 55 2 5 119 14 129 2.32e-29 115
MS.gene015207.t1 MTR_7g102110 49.533 107 52 2 5 109 14 120 3.84e-29 113
MS.gene015207.t1 MTR_1g076150 45.255 137 62 4 5 132 14 146 3.91e-29 112
MS.gene015207.t1 MTR_3g097450 41.026 156 77 2 5 159 14 155 5.00e-29 113
MS.gene015207.t1 MTR_3g074520 48.182 110 54 2 5 112 14 122 5.86e-29 114
MS.gene015207.t1 MTR_0008s0470 38.312 154 90 2 5 157 15 164 7.36e-29 112
MS.gene015207.t1 MTR_6g009430 42.975 121 68 1 5 124 14 134 7.60e-29 113
MS.gene015207.t1 MTR_7g076740 51.351 111 50 3 5 112 14 123 8.13e-29 112
MS.gene015207.t1 MTR_7g011170 47.706 109 56 1 5 112 14 122 9.41e-29 112
MS.gene015207.t1 MTR_3g103570 50.485 103 49 2 5 105 14 116 1.28e-28 113
MS.gene015207.t1 MTR_1g100667 48.598 107 54 1 5 110 15 121 1.52e-28 111
MS.gene015207.t1 MTR_1g043080 50.980 102 49 1 5 105 14 115 1.68e-28 110
MS.gene015207.t1 MTR_0008s0390 36.364 154 84 2 5 157 15 155 1.82e-28 111
MS.gene015207.t1 MTR_8g031360 37.297 185 88 4 5 162 15 198 2.39e-28 111
MS.gene015207.t1 MTR_0063s0090 44.275 131 62 4 5 133 14 135 2.52e-28 109
MS.gene015207.t1 MTR_1g045610 48.113 106 52 2 5 108 23 127 2.90e-28 110
MS.gene015207.t1 MTR_4g057635 48.624 109 54 2 5 111 14 122 3.17e-28 111
MS.gene015207.t1 MTR_5g014990 50.485 103 49 2 5 105 14 116 3.19e-28 111
MS.gene015207.t1 MTR_2g097910 41.791 134 77 1 5 137 22 155 3.60e-28 111
MS.gene015207.t1 MTR_1g112760 48.718 117 57 2 5 119 15 130 3.96e-28 109
MS.gene015207.t1 MTR_8g017500 34.419 215 111 7 5 192 14 225 4.28e-28 112
MS.gene015207.t1 MTR_7g117730 49.057 106 45 2 5 105 14 115 4.33e-28 109
MS.gene015207.t1 MTR_5g079670 47.706 109 56 1 5 112 13 121 4.93e-28 108
MS.gene015207.t1 MTR_4g065017 46.847 111 58 1 5 114 19 129 5.32e-28 111
MS.gene015207.t1 MTR_1g073170 49.515 103 49 2 5 105 22 123 5.62e-28 109
MS.gene015207.t1 MTR_7g035350 51.485 101 49 0 1 101 221 321 6.32e-28 113
MS.gene015207.t1 MTR_4g100720 47.170 106 55 1 5 109 15 120 7.22e-28 107
MS.gene015207.t1 MTR_3g077110 46.341 123 63 2 5 125 14 135 7.31e-28 111
MS.gene015207.t1 MTR_7g087130 49.057 106 53 1 5 109 14 119 9.20e-28 110
MS.gene015207.t1 MTR_8g027345 51.961 102 48 1 5 105 14 115 1.18e-27 109
MS.gene015207.t1 MTR_2g089620 36.538 156 98 1 5 159 14 169 1.23e-27 110
MS.gene015207.t1 MTR_1g017140 50.485 103 49 2 5 105 14 116 1.34e-27 110
MS.gene015207.t1 MTR_8g042410 50.000 102 50 1 5 105 39 140 1.42e-27 112
MS.gene015207.t1 MTR_6g027340 36.800 125 79 0 5 129 16 140 1.43e-27 107
MS.gene015207.t1 MTR_2g064160 49.091 110 53 2 5 112 13 121 1.53e-27 109
MS.gene015207.t1 MTR_3g028740 51.961 102 48 1 5 105 24 125 2.05e-27 110
MS.gene015207.t1 MTR_4g073420 46.552 116 61 1 5 119 14 129 2.33e-27 108
MS.gene015207.t1 MTR_7g115650 47.170 106 55 1 1 105 10 115 2.50e-27 106
MS.gene015207.t1 MTR_7g110830 49.138 116 58 1 5 119 14 129 2.75e-27 110
MS.gene015207.t1 MTR_4g105130 47.500 120 62 1 5 123 14 133 2.87e-27 109
MS.gene015207.t1 MTR_1g017000 47.573 103 52 2 5 105 14 116 2.99e-27 107
MS.gene015207.t1 MTR_2g095520 53.061 98 44 2 5 100 14 111 3.40e-27 108
MS.gene015207.t1 MTR_4g063100 47.059 102 53 1 5 105 9 110 3.53e-27 107
MS.gene015207.t1 MTR_6g055910 50.000 102 50 1 5 105 16 117 3.75e-27 108
MS.gene015207.t1 MTR_2g034790 45.217 115 62 1 5 118 14 128 4.21e-27 108
MS.gene015207.t1 MTR_8g017440 35.233 193 98 6 5 171 14 205 4.48e-27 108
MS.gene015207.t1 MTR_1g085640 46.341 123 65 1 5 126 14 136 4.56e-27 109
MS.gene015207.t1 MTR_2g089450 48.039 102 50 2 5 104 14 114 4.85e-27 107
MS.gene015207.t1 MTR_0251s0050 44.444 117 64 1 5 120 15 131 5.36e-27 107
MS.gene015207.t1 MTR_6g027360 36.800 125 79 0 5 129 78 202 5.52e-27 108
MS.gene015207.t1 MTR_8g098860 51.961 102 48 1 5 105 14 115 6.15e-27 108
MS.gene015207.t1 MTR_4g082230 42.308 130 73 2 5 133 14 142 7.23e-27 109
MS.gene015207.t1 MTR_1g021230 50.980 102 49 1 5 105 59 160 7.76e-27 109
MS.gene015207.t1 MTR_4g082290 42.308 130 73 2 5 133 14 142 8.15e-27 109
MS.gene015207.t1 MTR_5g088610 48.182 110 53 3 1 106 7 116 8.94e-27 108
MS.gene015207.t1 MTR_4g121460 44.094 127 68 2 5 128 14 140 9.59e-27 108
MS.gene015207.t1 MTR_7g010210 49.020 102 51 1 5 105 14 115 1.05e-26 106
MS.gene015207.t1 MTR_7g010210 49.020 102 51 1 5 105 14 115 1.14e-26 107
MS.gene015207.t1 MTR_0140s0030 49.057 106 45 2 5 105 15 116 1.26e-26 107
MS.gene015207.t1 MTR_0489s0020 49.057 106 45 2 5 105 15 116 1.26e-26 107
MS.gene015207.t1 MTR_8g017540 36.000 200 100 8 5 178 60 257 1.60e-26 108
MS.gene015207.t1 MTR_1g043050 32.663 199 129 3 5 202 14 208 1.66e-26 105
MS.gene015207.t1 MTR_2g099740 33.168 202 97 6 5 194 14 189 1.71e-26 108
MS.gene015207.t1 MTR_1g110460 41.284 109 63 1 5 112 28 136 1.98e-26 106
MS.gene015207.t1 MTR_5g088080 48.182 110 54 3 2 109 11 119 2.11e-26 105
MS.gene015207.t1 MTR_5g088150 48.182 110 54 3 2 109 11 119 2.11e-26 105
MS.gene015207.t1 MTR_5g488210 48.182 110 54 3 2 109 11 119 2.11e-26 105
MS.gene015207.t1 MTR_3g011610 49.020 102 51 1 5 105 39 140 2.26e-26 109
MS.gene015207.t1 MTR_4g485530 43.363 113 63 1 1 112 10 122 2.37e-26 103
MS.gene015207.t1 MTR_4g097570 50.000 98 46 2 5 99 14 111 2.54e-26 105
MS.gene015207.t1 MTR_5g488170 48.182 110 54 3 2 109 11 119 2.57e-26 104
MS.gene015207.t1 MTR_5g088640 48.182 110 54 3 2 109 11 119 2.77e-26 105
MS.gene015207.t1 MTR_3g083540 44.828 116 63 1 5 119 43 158 3.14e-26 105
MS.gene015207.t1 MTR_5g010020 53.608 97 44 1 5 100 14 110 3.20e-26 106
MS.gene015207.t1 MTR_7g111290 50.427 117 55 2 5 119 14 129 3.86e-26 107
MS.gene015207.t1 MTR_1g062940 48.544 103 50 2 5 105 8 109 4.07e-26 103
MS.gene015207.t1 MTR_7g035075 48.077 104 53 1 2 104 13 116 4.62e-26 103
MS.gene015207.t1 MTR_2g088170 52.941 102 47 1 5 105 31 132 5.36e-26 107
MS.gene015207.t1 MTR_3g039990 46.364 110 50 2 5 109 15 120 9.71e-26 104
MS.gene015207.t1 MTR_7g096930 49.020 102 51 1 5 105 14 115 1.17e-25 103
MS.gene015207.t1 MTR_7g450950 45.714 105 54 1 4 105 156 260 1.37e-25 104
MS.gene015207.t1 MTR_6g090405 47.573 103 52 2 5 105 14 116 1.89e-25 102
MS.gene015207.t1 MTR_4g102380 43.802 121 65 2 5 123 14 133 1.97e-25 103
MS.gene015207.t1 MTR_4g097570 49.485 97 47 2 5 99 14 110 2.31e-25 103
MS.gene015207.t1 MTR_2g067420 51.546 97 46 1 5 100 16 112 2.39e-25 103
MS.gene015207.t1 MTR_0008s0280 45.763 118 58 4 5 117 14 130 2.72e-25 101
MS.gene015207.t1 MTR_8g020490 47.059 102 53 1 5 105 10 111 2.88e-25 102
MS.gene015207.t1 MTR_1g057980 48.958 96 49 0 5 100 80 175 3.26e-25 103
MS.gene015207.t1 MTR_5g062790 48.598 107 52 3 1 105 7 112 3.47e-25 103
MS.gene015207.t1 MTR_6g012180 48.515 101 43 2 5 100 14 110 4.12e-25 103
MS.gene015207.t1 MTR_2g096380 44.660 103 56 1 5 106 8 110 4.31e-25 101
MS.gene015207.t1 MTR_2g089420 46.602 103 52 2 5 105 13 114 6.35e-25 104
MS.gene015207.t1 MTR_7g017260 41.379 116 65 1 5 117 27 142 7.50e-25 101
MS.gene015207.t1 MTR_4g128670 50.000 98 47 2 5 100 14 111 8.55e-25 102
MS.gene015207.t1 MTR_6g006030 44.340 106 58 1 5 109 16 121 1.44e-24 99.4
MS.gene015207.t1 MTR_8g017340 50.000 104 48 3 5 105 14 116 1.63e-24 103
MS.gene015207.t1 MTR_5g078140 43.333 120 65 2 5 122 14 132 1.79e-24 101
MS.gene015207.t1 MTR_5g079120 39.683 126 75 1 5 129 63 188 1.87e-24 101
MS.gene015207.t1 MTR_3g065440 44.545 110 58 2 5 112 14 122 2.05e-24 101
MS.gene015207.t1 MTR_0247s0040 44.000 100 55 1 5 103 9 108 4.31e-24 97.1
MS.gene015207.t1 MTR_0193s0090 42.574 101 57 1 5 104 9 109 6.55e-24 97.4
MS.gene015207.t1 MTR_1g086530 43.119 109 61 1 5 112 35 143 1.11e-23 98.6
MS.gene015207.t1 MTR_5g078910 42.157 102 58 1 5 105 9 110 1.15e-23 99.0
MS.gene015207.t1 MTR_0001s0360 41.905 105 60 1 5 108 9 113 1.47e-23 97.8
MS.gene015207.t1 MTR_5g079220 41.176 102 59 1 5 105 23 124 1.76e-23 97.8
MS.gene015207.t1 MTR_5g079290 40.000 105 62 1 5 108 19 123 1.92e-23 97.4
MS.gene015207.t1 MTR_8g017390 48.077 104 50 3 5 105 14 116 2.04e-23 100
MS.gene015207.t1 MTR_8g017350 49.038 104 49 3 5 105 14 116 2.07e-23 101
MS.gene015207.t1 MTR_5g078800 42.157 102 58 1 5 105 9 110 2.96e-23 97.1
MS.gene015207.t1 MTR_4g125520 42.453 106 60 1 5 109 14 119 3.06e-23 97.8
MS.gene015207.t1 MTR_5g078860 43.137 102 57 1 5 105 9 110 3.76e-23 97.8
MS.gene015207.t1 MTR_5g078930 39.683 126 75 1 5 129 11 136 3.77e-23 95.5
MS.gene015207.t1 MTR_3g045430 41.880 117 67 1 8 123 18 134 6.44e-23 96.7
MS.gene015207.t1 MTR_1g086510 42.202 109 62 1 5 112 23 131 6.48e-23 96.3
MS.gene015207.t1 MTR_2g033170 41.593 113 65 1 1 112 22 134 1.03e-22 96.7
MS.gene015207.t1 MTR_8g060940 42.424 99 56 1 5 102 9 107 5.41e-22 93.2
MS.gene015207.t1 MTR_1g083630 44.118 102 56 1 5 105 14 115 1.07e-21 95.9
MS.gene015207.t1 MTR_5g078950 40.000 100 59 1 5 103 9 108 1.31e-21 92.4
MS.gene015207.t1 MTR_0197s0010 37.391 115 71 1 7 120 5 119 5.82e-21 90.1
MS.gene015207.t1 MTR_7g109320 34.973 183 109 4 5 183 14 190 1.56e-20 91.3
MS.gene015207.t1 MTR_4g123040 40.708 113 66 1 1 112 22 134 1.70e-20 90.5
MS.gene015207.t1 MTR_8g468380 39.048 105 63 1 8 112 25 128 2.82e-20 91.3
MS.gene015207.t1 MTR_5g038910 37.755 98 61 0 8 105 29 126 3.11e-20 91.3
MS.gene015207.t1 MTR_5g038910 37.755 98 61 0 8 105 29 126 5.58e-20 90.1
MS.gene015207.t1 MTR_4g063100 50.000 68 34 0 38 105 14 81 3.55e-19 85.1
MS.gene015207.t1 MTR_6g055910 52.941 68 32 0 38 105 21 88 3.69e-19 85.5
MS.gene015207.t1 MTR_4g128190 44.860 107 45 4 5 110 13 106 4.16e-18 82.4
MS.gene015207.t1 MTR_2g096380 46.377 69 37 0 38 106 23 91 9.94e-18 80.9
MS.gene015207.t1 MTR_7g111290 49.412 85 43 0 38 122 6 90 2.31e-17 82.0
MS.gene015207.t1 MTR_5g007300 48.000 75 38 1 5 78 66 140 2.97e-17 77.4
MS.gene015207.t1 MTR_1g008970 40.426 94 37 1 2 95 107 181 1.58e-16 78.2
MS.gene015207.t1 MTR_1g085880 46.000 100 51 3 8 105 17 115 6.21e-16 75.5
MS.gene015207.t1 MTR_1g085770 46.000 100 51 3 8 105 17 115 1.06e-15 76.6
MS.gene015207.t1 MTR_7g061550 37.234 94 56 1 8 98 10 103 9.72e-14 71.6
MS.gene015207.t1 MTR_0023s0210 36.709 79 41 2 5 78 9 83 1.36e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene015207.t1 AT4G37260 49.568 347 113 10 1 320 9 320 1.83e-97 291
MS.gene015207.t1 AT5G67300 52.870 331 116 14 2 320 3 305 9.02e-90 271
MS.gene015207.t1 AT3G50060 49.351 308 107 8 2 296 3 274 2.75e-84 256
MS.gene015207.t1 AT2G23290 45.272 349 114 8 1 320 9 309 3.56e-81 249
MS.gene015207.t1 AT3G55730 68.224 107 34 0 3 109 54 160 3.81e-48 166
MS.gene015207.t1 AT3G09230 60.484 124 38 1 2 114 52 175 6.48e-47 163
MS.gene015207.t1 AT2G39880 65.049 103 36 0 3 105 48 150 3.42e-44 155
MS.gene015207.t1 AT3G09370 55.556 117 52 0 2 118 127 243 4.84e-39 144
MS.gene015207.t1 AT3G09370 55.556 117 52 0 2 118 132 248 5.06e-39 144
MS.gene015207.t1 AT3G09370 55.556 117 52 0 2 118 140 256 5.32e-39 144
MS.gene015207.t1 AT1G69560 55.446 101 45 0 5 105 107 207 2.35e-38 139
MS.gene015207.t1 AT1G69560 55.446 101 45 0 5 105 123 223 2.63e-38 139
MS.gene015207.t1 AT4G32730 44.099 161 85 2 4 160 86 245 3.72e-38 144
MS.gene015207.t1 AT4G32730 44.099 161 85 2 4 160 86 245 4.49e-38 144
MS.gene015207.t1 AT4G32730 44.099 161 85 2 4 160 86 245 4.49e-38 144
MS.gene015207.t1 AT4G32730 44.099 161 85 2 4 160 86 245 4.49e-38 144
MS.gene015207.t1 AT4G32730 44.099 161 85 2 4 160 86 245 4.49e-38 144
MS.gene015207.t1 AT1G26780 55.446 101 45 0 5 105 98 198 7.94e-38 136
MS.gene015207.t1 AT5G17800 47.015 134 68 1 5 138 93 223 8.23e-38 137
MS.gene015207.t1 AT1G26780 55.446 101 45 0 5 105 98 198 2.41e-37 137
MS.gene015207.t1 AT5G02320 50.000 120 60 0 4 123 66 185 2.90e-37 139
MS.gene015207.t1 AT3G29020 54.455 101 46 0 5 105 65 165 3.37e-37 133
MS.gene015207.t1 AT5G02320 50.000 120 60 0 4 123 126 245 3.83e-37 139
MS.gene015207.t1 AT5G02320 50.000 120 60 0 4 123 126 245 3.83e-37 139
MS.gene015207.t1 AT3G29020 54.455 101 46 0 5 105 67 167 1.72e-36 133
MS.gene015207.t1 AT5G11510 48.333 120 58 1 4 119 80 199 4.58e-36 138
MS.gene015207.t1 AT5G11510 48.333 120 58 1 4 119 80 199 4.58e-36 138
MS.gene015207.t1 AT5G11510 48.333 120 58 1 4 119 80 199 4.58e-36 138
MS.gene015207.t1 AT5G11510 48.333 120 58 1 4 119 80 199 5.62e-36 138
MS.gene015207.t1 AT5G11510 48.333 120 58 1 4 119 80 199 5.76e-36 137
MS.gene015207.t1 AT4G33450 52.475 101 48 0 5 105 19 119 1.87e-35 129
MS.gene015207.t1 AT1G17950 51.485 101 49 0 5 105 5 105 8.25e-35 127
MS.gene015207.t1 AT5G11050 50.962 104 51 0 4 107 104 207 1.23e-34 131
MS.gene015207.t1 AT1G73410 54.455 101 46 0 5 105 6 106 2.50e-34 124
MS.gene015207.t1 AT1G73410 54.455 101 46 0 5 105 6 106 3.17e-34 125
MS.gene015207.t1 AT5G58850 38.509 161 95 2 4 160 104 264 1.37e-33 128
MS.gene015207.t1 AT5G60890 47.967 123 63 1 5 126 14 136 1.42e-33 125
MS.gene015207.t1 AT3G27785 53.846 104 48 0 4 107 188 291 1.77e-33 128
MS.gene015207.t1 AT4G18770 51.818 110 48 1 4 108 216 325 2.00e-32 125
MS.gene015207.t1 AT5G10280 50.909 110 51 2 5 112 14 122 1.03e-31 121
MS.gene015207.t1 AT5G54230 49.541 109 54 1 5 112 14 122 8.39e-31 118
MS.gene015207.t1 AT5G16770 45.669 127 68 1 5 130 14 140 1.25e-30 118
MS.gene015207.t1 AT5G16770 45.669 127 68 1 5 130 14 140 1.25e-30 118
MS.gene015207.t1 AT5G65230 50.909 110 51 2 5 112 14 122 1.53e-30 117
MS.gene015207.t1 AT5G16770 45.669 127 68 1 5 130 14 140 2.11e-30 117
MS.gene015207.t1 AT5G16770 45.669 127 68 1 5 130 14 140 2.11e-30 117
MS.gene015207.t1 AT4G26930 53.465 101 46 1 5 104 21 121 3.04e-30 118
MS.gene015207.t1 AT4G28110 48.624 109 55 1 5 112 14 122 3.46e-30 116
MS.gene015207.t1 AT5G56110 47.706 109 56 1 5 112 14 122 4.45e-30 116
MS.gene015207.t1 AT1G34670 49.541 109 54 1 5 112 14 122 4.90e-30 117
MS.gene015207.t1 AT2G32460 52.941 102 47 1 5 105 20 121 5.44e-30 119
MS.gene015207.t1 AT2G32460 52.941 102 47 1 5 105 8 109 5.54e-30 119
MS.gene015207.t1 AT5G39700 47.475 99 52 0 6 104 57 155 5.68e-30 113
MS.gene015207.t1 AT3G02940 49.541 109 54 1 5 112 14 122 5.97e-30 116
MS.gene015207.t1 AT5G15310 42.958 142 74 2 5 139 14 155 6.09e-30 114
MS.gene015207.t1 AT4G21440 48.624 109 55 1 5 112 14 122 6.78e-30 117
MS.gene015207.t1 AT5G15310 42.958 142 74 2 5 139 14 155 7.91e-30 115
MS.gene015207.t1 AT5G15310 42.958 142 74 2 5 139 14 155 8.24e-30 116
MS.gene015207.t1 AT3G02940 49.541 109 54 1 5 112 14 122 1.13e-29 115
MS.gene015207.t1 AT3G02940 49.541 109 54 1 5 112 14 122 1.13e-29 115
MS.gene015207.t1 AT3G11440 50.980 102 49 1 5 105 43 144 1.53e-29 117
MS.gene015207.t1 AT3G11440 50.980 102 49 1 5 105 43 144 2.40e-29 118
MS.gene015207.t1 AT3G11440 50.980 102 49 1 5 105 43 144 2.40e-29 118
MS.gene015207.t1 AT3G11440 50.980 102 49 1 5 105 43 144 2.40e-29 118
MS.gene015207.t1 AT4G05100 47.706 109 56 1 5 112 15 123 2.56e-29 114
MS.gene015207.t1 AT1G18710 47.706 109 56 1 5 112 14 122 3.16e-29 113
MS.gene015207.t1 AT3G01140 49.541 109 54 1 5 112 14 122 3.37e-29 114
MS.gene015207.t1 AT5G06100 50.980 102 49 1 5 105 34 135 3.45e-29 116
MS.gene015207.t1 AT3G60460 52.941 102 46 2 5 104 13 114 4.86e-29 113
MS.gene015207.t1 AT1G22640 35.468 203 108 4 5 184 14 216 4.93e-29 112
MS.gene015207.t1 AT5G14750 50.000 102 50 1 5 105 18 119 4.98e-29 110
MS.gene015207.t1 AT3G01140 49.541 109 54 1 5 112 57 165 5.02e-29 115
MS.gene015207.t1 AT5G12870 50.000 106 52 1 5 109 20 125 5.06e-29 113
MS.gene015207.t1 AT5G26660 50.427 117 55 2 5 119 14 129 5.19e-29 114
MS.gene015207.t1 AT4G38620 35.644 202 120 4 5 204 14 207 5.98e-29 112
MS.gene015207.t1 AT1G74430 47.706 109 56 1 5 112 14 122 6.21e-29 112
MS.gene015207.t1 AT5G40330 50.000 102 50 1 5 105 14 115 6.61e-29 111
MS.gene015207.t1 AT5G06100 50.980 102 49 1 5 105 34 135 6.76e-29 116
MS.gene015207.t1 AT5G06100 50.980 102 49 1 5 105 34 135 6.76e-29 116
MS.gene015207.t1 AT5G06100 50.980 102 49 1 5 105 34 135 6.76e-29 116
MS.gene015207.t1 AT5G06100 50.980 102 49 1 5 105 34 135 6.76e-29 116
MS.gene015207.t1 AT1G79180 49.600 125 60 2 5 126 16 140 6.94e-29 112
MS.gene015207.t1 AT1G57560 50.427 117 55 2 5 119 14 129 7.35e-29 112
MS.gene015207.t1 AT1G09540 49.573 117 56 2 5 119 14 129 7.47e-29 114
MS.gene015207.t1 AT3G61250 47.863 117 58 2 5 119 14 129 7.97e-29 112
MS.gene015207.t1 AT3G27920 44.853 136 64 4 5 132 16 148 8.30e-29 111
MS.gene015207.t1 AT5G52600 50.980 102 49 1 5 105 14 115 8.87e-29 110
MS.gene015207.t1 AT3G30210 46.281 121 60 2 5 124 29 145 1.08e-28 112
MS.gene015207.t1 AT1G56160 42.953 149 75 3 5 144 16 163 1.12e-28 112
MS.gene015207.t1 AT1G57560 50.427 117 55 2 5 119 14 129 1.20e-28 112
MS.gene015207.t1 AT5G55020 51.485 101 48 1 5 104 28 128 1.37e-28 115
MS.gene015207.t1 AT1G18570 43.902 123 64 2 5 126 15 133 2.05e-28 112
MS.gene015207.t1 AT5G40360 35.057 174 103 3 5 169 158 330 2.56e-28 112
MS.gene015207.t1 AT4G01680 51.376 109 52 1 5 112 14 122 3.05e-28 110
MS.gene015207.t1 AT2G36890 50.000 108 52 2 5 110 14 121 3.98e-28 110
MS.gene015207.t1 AT1G08810 43.791 153 69 5 5 151 14 155 4.00e-28 110
MS.gene015207.t1 AT4G17785 48.182 110 54 2 5 112 15 123 4.03e-28 112
MS.gene015207.t1 AT1G16490 50.459 109 45 2 5 108 16 120 4.44e-28 110
MS.gene015207.t1 AT4G17785 48.182 110 54 2 5 112 15 123 5.04e-28 112
MS.gene015207.t1 AT5G62470 48.571 105 54 0 5 109 14 118 5.48e-28 111
MS.gene015207.t1 AT2G36890 50.000 108 52 2 5 110 55 162 6.86e-28 111
MS.gene015207.t1 AT4G09460 43.846 130 70 2 5 131 14 143 6.86e-28 108
MS.gene015207.t1 AT4G13480 49.524 105 50 2 5 107 8 111 7.19e-28 109
MS.gene015207.t1 AT3G12720 50.000 110 52 2 5 112 24 132 7.48e-28 110
MS.gene015207.t1 AT4G01680 51.376 109 52 1 5 112 14 122 7.84e-28 110
MS.gene015207.t1 AT3G23250 33.641 217 124 6 5 213 14 218 7.88e-28 110
MS.gene015207.t1 AT5G14340 43.590 117 63 2 5 119 26 141 9.34e-28 109
MS.gene015207.t1 AT1G35515 47.706 109 56 1 5 112 14 122 1.17e-27 107
MS.gene015207.t1 AT2G26960 52.475 101 47 1 5 104 22 122 1.23e-27 112
MS.gene015207.t1 AT3G24310 48.113 106 52 2 5 108 20 124 1.25e-27 108
MS.gene015207.t1 AT5G62470 48.182 110 48 2 5 109 14 119 1.60e-27 110
MS.gene015207.t1 AT1G74080 44.000 125 65 3 5 128 14 134 1.76e-27 110
MS.gene015207.t1 AT4G34990 47.414 116 60 1 5 119 14 129 1.83e-27 108
MS.gene015207.t1 AT4G37780 50.943 106 50 2 5 108 14 119 2.03e-27 109
MS.gene015207.t1 AT2G16720 48.673 113 49 2 5 112 14 122 2.41e-27 108
MS.gene015207.t1 AT3G12820 51.456 103 47 2 5 105 16 117 2.77e-27 107
MS.gene015207.t1 AT3G13890 41.667 132 76 1 5 135 14 145 3.12e-27 109
MS.gene015207.t1 AT4G25560 49.020 102 51 1 5 105 12 113 3.55e-27 108
MS.gene015207.t1 AT3G13540 40.714 140 74 2 1 131 21 160 5.18e-27 107
MS.gene015207.t1 AT3G48920 49.505 101 50 1 5 104 20 120 5.23e-27 107
MS.gene015207.t1 AT3G08500 50.000 102 50 1 5 105 32 133 5.26e-27 108
MS.gene015207.t1 AT1G63910 51.961 102 48 1 5 105 14 115 6.59e-27 108
MS.gene015207.t1 AT5G59780 46.078 102 54 1 5 105 10 111 8.44e-27 105
MS.gene015207.t1 AT3G28470 49.485 97 48 1 5 100 14 110 9.39e-27 107
MS.gene015207.t1 AT5G57620 49.515 103 50 2 5 105 14 116 9.50e-27 108
MS.gene015207.t1 AT1G06180 51.456 103 47 2 5 105 14 115 1.16e-26 105
MS.gene015207.t1 AT5G07700 42.969 128 68 2 5 131 14 137 1.19e-26 107
MS.gene015207.t1 AT5G07700 42.969 128 68 2 5 131 14 137 1.19e-26 107
MS.gene015207.t1 AT5G61420 46.218 119 63 1 5 122 14 132 1.26e-26 108
MS.gene015207.t1 AT3G46130 47.059 102 53 1 5 105 11 112 1.39e-26 105
MS.gene015207.t1 AT2G31180 48.077 104 53 1 5 107 14 117 1.55e-26 105
MS.gene015207.t1 AT3G47600 48.113 106 46 2 5 105 14 115 2.01e-26 107
MS.gene015207.t1 AT5G65790 49.515 103 50 2 5 105 14 116 2.08e-26 107
MS.gene015207.t1 AT3G13890 40.426 141 74 2 5 135 14 154 2.12e-26 107
MS.gene015207.t1 AT5G23000 50.485 103 49 2 5 105 14 116 2.20e-26 107
MS.gene015207.t1 AT1G74650 49.057 106 45 2 5 105 14 115 2.45e-26 107
MS.gene015207.t1 AT5G40350 48.515 101 51 1 5 104 19 119 2.67e-26 103
MS.gene015207.t1 AT5G07690 47.706 109 52 2 5 112 14 118 3.44e-26 106
MS.gene015207.t1 AT4G01680 47.107 121 51 2 5 112 14 134 3.65e-26 106
MS.gene015207.t1 AT3G28910 45.133 113 53 2 5 112 14 122 5.91e-26 105
MS.gene015207.t1 AT1G25340 41.284 109 63 1 5 112 20 128 1.10e-25 103
MS.gene015207.t1 AT1G25340 41.667 108 59 1 5 112 20 123 1.48e-25 103
MS.gene015207.t1 AT4G00540 49.038 104 50 1 5 105 103 206 1.77e-25 105
MS.gene015207.t1 AT3G01530 37.349 166 97 3 5 167 27 188 1.85e-25 101
MS.gene015207.t1 AT1G25340 41.667 108 59 1 5 112 20 123 2.05e-25 103
MS.gene015207.t1 AT3G49690 48.544 103 51 2 5 105 14 116 2.28e-25 103
MS.gene015207.t1 AT3G27810 47.525 101 52 1 5 104 22 122 2.68e-25 101
MS.gene015207.t1 AT4G00540 49.038 104 50 1 5 105 101 204 3.56e-25 105
MS.gene015207.t1 AT2G47190 43.750 112 62 1 2 112 19 130 3.66e-25 102
MS.gene015207.t1 AT4G12350 43.697 119 64 2 5 121 14 131 8.10e-25 101
MS.gene015207.t1 AT4G22680 43.697 119 64 2 5 121 14 131 1.11e-24 100
MS.gene015207.t1 AT3G62610 47.059 102 53 1 5 105 14 115 2.05e-24 101
MS.gene015207.t1 AT1G79180 39.873 158 59 3 5 126 16 173 2.57e-24 101
MS.gene015207.t1 AT3G53200 49.020 102 51 1 5 105 11 112 3.36e-24 99.0
MS.gene015207.t1 AT5G35550 44.118 102 56 1 5 105 16 117 4.15e-24 99.4
MS.gene015207.t1 AT1G66230 42.735 117 64 2 5 119 14 129 5.89e-24 99.4
MS.gene015207.t1 AT5G16600 41.270 126 71 2 5 128 14 138 6.70e-24 100
MS.gene015207.t1 AT5G52260 47.573 103 51 2 5 105 14 115 8.30e-24 98.6
MS.gene015207.t1 AT1G68320 39.450 109 65 1 5 112 21 129 9.98e-24 99.0
MS.gene015207.t1 AT2G25230 44.898 98 52 2 8 104 29 125 1.07e-23 97.4
MS.gene015207.t1 AT2G47460 40.164 122 68 2 5 125 14 131 2.17e-23 99.4
MS.gene015207.t1 AT2G26950 35.714 140 78 3 5 136 18 153 3.98e-23 99.0
MS.gene015207.t1 AT5G49330 46.078 102 54 1 5 105 14 115 5.75e-23 97.8
MS.gene015207.t1 AT1G48000 39.167 120 71 2 5 123 34 152 6.21e-23 95.9
MS.gene015207.t1 AT5G62320 45.299 117 54 3 5 112 15 130 6.34e-23 95.9
MS.gene015207.t1 AT2G02820 40.404 99 59 0 8 106 33 131 4.34e-22 96.7
MS.gene015207.t1 AT2G02820 40.404 99 59 0 8 106 33 131 4.98e-22 96.3
MS.gene015207.t1 AT3G06490 41.593 113 65 1 1 112 17 129 5.50e-22 94.7
MS.gene015207.t1 AT2G02820 40.816 98 58 0 8 105 33 130 6.28e-22 94.7
MS.gene015207.t1 AT5G49620 41.593 113 65 1 1 112 24 136 9.07e-22 94.0
MS.gene015207.t1 AT5G14750 55.882 68 30 0 38 105 18 85 1.29e-21 90.1
MS.gene015207.t1 AT1G14350 36.290 124 78 1 8 130 28 151 2.66e-21 94.4
MS.gene015207.t1 AT1G14350 36.290 124 78 1 8 130 28 151 2.66e-21 94.4
MS.gene015207.t1 AT1G66370 38.983 118 58 3 5 112 10 123 4.30e-21 90.9
MS.gene015207.t1 AT5G26660 52.439 82 39 0 38 119 17 98 1.66e-20 90.5
MS.gene015207.t1 AT3G12820 57.353 68 29 0 38 105 2 69 3.73e-20 87.0
MS.gene015207.t1 AT5G40350 53.731 67 31 0 38 104 8 74 2.65e-19 84.0
MS.gene015207.t1 AT5G59780 50.000 68 34 0 38 105 23 90 3.81e-19 84.7
MS.gene015207.t1 AT3G46130 50.000 68 34 0 38 105 23 90 8.08e-19 84.3
MS.gene015207.t1 AT3G46130 50.000 68 34 0 38 105 13 80 8.13e-19 84.0
MS.gene015207.t1 AT5G40430 38.835 103 62 1 2 104 51 152 9.92e-19 84.3
MS.gene015207.t1 AT1G66380 41.509 106 53 2 5 105 10 111 1.22e-18 81.3
MS.gene015207.t1 AT5G35550 50.000 78 37 1 30 105 43 120 2.01e-18 83.6
MS.gene015207.t1 AT3G27810 52.239 67 32 0 38 104 7 73 2.72e-18 81.6
MS.gene015207.t1 AT5G49620 37.008 127 65 2 1 112 24 150 3.13e-18 84.3
MS.gene015207.t1 AT3G53200 52.941 68 32 0 38 105 12 79 6.61e-18 81.3
MS.gene015207.t1 AT1G56650 37.398 123 65 3 5 119 10 128 7.04e-18 82.0
MS.gene015207.t1 AT1G71030 48.611 72 37 0 41 112 19 90 2.12e-17 79.3
MS.gene015207.t1 AT1G71030 48.611 72 37 0 41 112 5 76 2.22e-17 79.0
MS.gene015207.t1 AT1G66390 40.566 106 54 2 5 105 10 111 4.90e-17 79.7
MS.gene015207.t1 AT3G18100 42.553 94 54 0 5 98 546 639 5.52e-17 82.0
MS.gene015207.t1 AT3G18100 42.553 94 54 0 5 98 498 591 6.03e-17 82.0
MS.gene015207.t1 AT1G18960 38.793 116 67 3 5 119 10 122 6.66e-17 80.1
MS.gene015207.t1 AT3G18100 42.553 94 54 0 5 98 333 426 9.03e-17 81.3
MS.gene015207.t1 AT3G18100 42.553 94 54 0 5 98 385 478 9.84e-17 81.3
MS.gene015207.t1 AT3G47600 51.471 68 33 0 38 105 42 109 2.23e-16 79.0
MS.gene015207.t1 AT1G22640 32.911 158 84 3 49 184 2 159 2.66e-15 73.9
MS.gene015207.t1 AT5G14750 50.000 58 29 0 49 106 2 59 6.31e-14 68.6
MS.gene015207.t1 AT5G14750 50.000 58 29 0 49 106 2 59 6.31e-14 68.6
MS.gene015207.t1 AT2G37630 38.298 94 55 1 8 98 7 100 1.77e-13 70.9
MS.gene015207.t1 AT1G66380 47.059 68 36 0 38 105 11 78 7.04e-13 64.7
MS.gene015207.t1 AT3G23250 29.651 172 102 5 49 213 2 161 1.46e-11 63.5
MS.gene015207.t1 AT4G25560 55.556 45 20 0 61 105 3 47 2.36e-11 62.8

Find 88 sgRNAs with CRISPR-Local

Find 98 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAAGTGCTTCATCTTCTTC+TGG 0.229752 5.4:+9828714 None:intergenic
ATCGTTCGATTTCGAAGATT+TGG 0.279727 5.4:+9828182 None:intergenic
AATTCTCCTGGTTCTCCTTC+TGG 0.309036 5.4:-9828324 MS.gene015207:CDS
AACTCCGCACTAAAACTAAA+TGG 0.322665 5.4:+9827949 None:intergenic
GGCGGTGGTGGCGGAGGAGG+TGG 0.328429 5.4:+9828057 None:intergenic
ATCAGAGCCCATGCTCGATT+TGG 0.330164 5.4:-9828537 MS.gene015207:CDS
AAATCGATACCGGGCCGGTC+AGG 0.346100 5.4:-9828645 MS.gene015207:CDS
CTTATAATCGACCAGTTTCT+CGG 0.347069 5.4:+9828669 None:intergenic
GGGATCGCACTTGGCGGTGG+TGG 0.376891 5.4:+9828045 None:intergenic
GGTGGTGGCGGAGGAGGTGG+TGG 0.378626 5.4:+9828060 None:intergenic
TCGTTATCACTCTCACTTCC+CGG 0.387087 5.4:-9828150 MS.gene015207:CDS
AGAAGCACGGGCCGAGAAAC+TGG 0.390908 5.4:-9828680 MS.gene015207:CDS
AATGCTTTGGTGAAGCGAAT+TGG 0.396166 5.4:-9827820 MS.gene015207:CDS
CTTGGCGGTGGTGGCGGAGG+AGG 0.401104 5.4:+9828054 None:intergenic
ATTATAGTATCATCCTCTTC+AGG 0.406195 5.4:+9828558 None:intergenic
AGAAGGAGAACCAGGAGAAT+TGG 0.407625 5.4:+9828326 None:intergenic
GCTGCTATTCCTGTTTCTAC+TGG 0.408564 5.4:-9828363 MS.gene015207:CDS
GATTATAAGCAAATCGATAC+CGG 0.413047 5.4:-9828655 MS.gene015207:CDS
TCTTAATAGCGTTATCAGTT+CGG 0.416198 5.4:+9828478 None:intergenic
ATCGGAACCGCCATCGGAAC+AGG 0.421410 5.4:+9827994 None:intergenic
GAGGAGTTACATGGCGGGAT+TGG 0.427475 5.4:-9827890 MS.gene015207:CDS
GGCGGTTCCGATGCAACAAT+CGG 0.428107 5.4:-9827983 MS.gene015207:CDS
ATCGCACTTGGCGGTGGTGG+CGG 0.428269 5.4:+9828048 None:intergenic
AGTGAGAGTGATAACGAAGT+TGG 0.431268 5.4:+9828156 None:intergenic
TTCACCACAAGTTGAGCATC+GGG 0.439155 5.4:-9828589 MS.gene015207:CDS
ATGCTCGATTTGGAAACAAA+TGG 0.440299 5.4:-9828527 MS.gene015207:CDS
GCACTTGGCGGTGGTGGCGG+AGG 0.449118 5.4:+9828051 None:intergenic
TTAACATGAGTGTTCACAAT+AGG 0.450108 5.4:+9828276 None:intergenic
TCATCTTCTTCTGGACTCCA+TGG 0.458499 5.4:+9828723 None:intergenic
ATATAAAGACCAGTAGAAAC+AGG 0.460718 5.4:+9828354 None:intergenic
GGAACAGCCGTAGTCATTAC+CGG 0.463029 5.4:+9828015 None:intergenic
ATAACGCTATTAAGAATCAT+TGG 0.466304 5.4:-9828470 MS.gene015207:CDS
AAGTGCGATCCCTTTGATTC+CGG 0.467573 5.4:-9828034 MS.gene015207:CDS
ATCAACACCAACACCAACAC+CGG 0.484745 5.4:+9828131 None:intergenic
TCACTCTCACTTCCCGGTGT+TGG 0.485863 5.4:-9828144 MS.gene015207:CDS
TATATTAACGCCAATTCTCC+TGG 0.489647 5.4:-9828336 MS.gene015207:CDS
GGATGGAATTAGGAATGCTT+TGG 0.501843 5.4:-9827833 MS.gene015207:CDS
GTCGTTTCTACGAGTGGTAG+AGG 0.505072 5.4:+9828213 None:intergenic
TGCTCGATTTGGAAACAAAT+GGG 0.505863 5.4:-9828526 MS.gene015207:CDS
TCACTTCCCGGTGTTGGTGT+TGG 0.510864 5.4:-9828138 MS.gene015207:CDS
TTTGATTCCGGTAATGACTA+CGG 0.511896 5.4:-9828022 MS.gene015207:CDS
ATTTGTTTCCAAATCGAGCA+TGG 0.512519 5.4:+9828529 None:intergenic
CATGATTTCCCTGACCGGCC+CGG 0.514477 5.4:+9828636 None:intergenic
CGGGATTGGAGCAACAGAAT+GGG 0.516969 5.4:-9827876 MS.gene015207:CDS
ATCTGCATGATTTCCCTGAC+CGG 0.517690 5.4:+9828631 None:intergenic
TACGGCTGTTCCTGTTCCGA+TGG 0.523658 5.4:-9828004 MS.gene015207:CDS
AAAGGGATCGCACTTGGCGG+TGG 0.526326 5.4:+9828042 None:intergenic
GCGGGATTGGAGCAACAGAA+TGG 0.529381 5.4:-9827877 MS.gene015207:CDS
TGTTGCATCGGAACCGCCAT+CGG 0.532631 5.4:+9827988 None:intergenic
GCGGTTCCGATGCAACAATC+GGG 0.533201 5.4:-9827982 MS.gene015207:CDS
TTTCACCACAAGTTGAGCAT+CGG 0.539872 5.4:-9828590 MS.gene015207:CDS
GTAGTCATTACCGGAATCAA+AGG 0.543559 5.4:+9828024 None:intergenic
GCGACGGTTCTCGTTGGCAC+AGG 0.545873 5.4:+9828237 None:intergenic
ACTGATCCCGATTGTTGCAT+CGG 0.546146 5.4:+9827976 None:intergenic
GGAGTTGTTGAGTGTGATGC+AGG 0.552988 5.4:-9827932 MS.gene015207:CDS
TTTGTTTCCAAATCGAGCAT+GGG 0.553033 5.4:+9828530 None:intergenic
GGAATCAAAGGGATCGCACT+TGG 0.553165 5.4:+9828036 None:intergenic
ATCAAAGGGATCGCACTTGG+CGG 0.553289 5.4:+9828039 None:intergenic
AATCGATACCGGGCCGGTCA+GGG 0.554290 5.4:-9828644 MS.gene015207:CDS
GGCTGTTCCTGTTCCGATGG+CGG 0.555350 5.4:-9828001 MS.gene015207:CDS
TCGGATCCAGAAGGAGAACC+AGG 0.556131 5.4:+9828318 None:intergenic
ACAAATGGGCTACAATAGCC+AGG 0.556596 5.4:-9828512 MS.gene015207:CDS
GGTGGTGGTACAGTGTTGAC+AGG 0.557281 5.4:+9828075 None:intergenic
AAAGAAATGGATCGGATCAA+AGG 0.563795 5.4:-9828747 None:intergenic
GAGAGTGATAACGAAGTTGG+AGG 0.571500 5.4:+9828159 None:intergenic
AGTTCGGCCCGATAAAAGCC+TGG 0.578285 5.4:+9828494 None:intergenic
TTAACAGAAAAGAAATGGAT+CGG 0.584436 5.4:-9828755 None:intergenic
TAGTCATTACCGGAATCAAA+GGG 0.591280 5.4:+9828025 None:intergenic
TGTTGACAGGCTCAGTTACA+CGG 0.599320 5.4:+9828088 None:intergenic
TTGAAAAGATCTGTTAGTGC+TGG 0.605131 5.4:-9828387 MS.gene015207:CDS
TCAACACCAACACCAACACC+GGG 0.608327 5.4:+9828132 None:intergenic
TGGATCGGATCAAAGGTCCA+TGG 0.609523 5.4:-9828740 MS.gene015207:CDS
TACGAGTGGTAGAGGCGCGA+CGG 0.610707 5.4:+9828221 None:intergenic
CGGTTCTCGTTGGCACAGGT+CGG 0.612535 5.4:+9828241 None:intergenic
GACGACGTCGTTTCTACGAG+TGG 0.617236 5.4:+9828207 None:intergenic
AAAGCCCGATGCTCAACTTG+TGG 0.622271 5.4:+9828585 None:intergenic
AACAGAGGTGAGGAGTTACA+TGG 0.624499 5.4:-9827899 MS.gene015207:CDS
AGAGGCGCGACGGTTCTCGT+TGG 0.636991 5.4:+9828231 None:intergenic
AGTGTTCACAATAGGTACGC+TGG 0.639684 5.4:+9828284 None:intergenic
TAAGCAAATCGATACCGGGC+CGG 0.639738 5.4:-9828650 MS.gene015207:CDS
ATTATAAGCAAATCGATACC+GGG 0.640424 5.4:-9828654 MS.gene015207:CDS
TCGCTCACATCGGATCCAGA+AGG 0.646473 5.4:+9828309 None:intergenic
GGAAATCATGCAGATTACGT+TGG 0.658062 5.4:-9828623 MS.gene015207:CDS
GCAGGAGATGATTAGAACAG+AGG 0.661967 5.4:-9827914 MS.gene015207:CDS
TACGCTGGACTCGCTCACAT+CGG 0.665244 5.4:+9828299 None:intergenic
GAGGTGAGGAGTTACATGGC+GGG 0.665524 5.4:-9827895 MS.gene015207:CDS
AGATGATTAGAACAGAGGTG+AGG 0.690040 5.4:-9827909 MS.gene015207:CDS
AGAGGTGAGGAGTTACATGG+CGG 0.733534 5.4:-9827896 MS.gene015207:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! ATAACGCTATTAAGAATCAT+TGG - chr5.4:9828069-9828088 MS.gene015207:CDS 25.0%
ATATAAAGACCAGTAGAAAC+AGG + chr5.4:9828188-9828207 None:intergenic 30.0%
ATTATAAGCAAATCGATACC+GGG - chr5.4:9827885-9827904 MS.gene015207:CDS 30.0%
ATTATAGTATCATCCTCTTC+AGG + chr5.4:9827984-9828003 None:intergenic 30.0%
GATTATAAGCAAATCGATAC+CGG - chr5.4:9827884-9827903 MS.gene015207:CDS 30.0%
TCTTAATAGCGTTATCAGTT+CGG + chr5.4:9828064-9828083 None:intergenic 30.0%
TTAACATGAGTGTTCACAAT+AGG + chr5.4:9828266-9828285 None:intergenic 30.0%
AAAAAGCTGAGGATGGAATT+AGG - chr5.4:9828696-9828715 MS.gene015207:CDS 35.0%
AACTCCGCACTAAAACTAAA+TGG + chr5.4:9828593-9828612 None:intergenic 35.0%
ATCGTTCGATTTCGAAGATT+TGG + chr5.4:9828360-9828379 None:intergenic 35.0%
ATTTGTTTCCAAATCGAGCA+TGG + chr5.4:9828013-9828032 None:intergenic 35.0%
CTTATAATCGACCAGTTTCT+CGG + chr5.4:9827873-9827892 None:intergenic 35.0%
TAGTCATTACCGGAATCAAA+GGG + chr5.4:9828517-9828536 None:intergenic 35.0%
TATATTAACGCCAATTCTCC+TGG - chr5.4:9828203-9828222 MS.gene015207:CDS 35.0%
TTGAAAAGATCTGTTAGTGC+TGG - chr5.4:9828152-9828171 MS.gene015207:CDS 35.0%
TTTGATTCCGGTAATGACTA+CGG - chr5.4:9828517-9828536 MS.gene015207:CDS 35.0%
TTTGTTTCCAAATCGAGCAT+GGG + chr5.4:9828012-9828031 None:intergenic 35.0%
! GATGTGTTTTCAAAAAGCTG+AGG - chr5.4:9828685-9828704 MS.gene015207:CDS 35.0%
! GCACTAACAGATCTTTTCAA+CGG + chr5.4:9828152-9828171 None:intergenic 35.0%
! TACAATAGCCAGGCTTTTAT+CGG - chr5.4:9828037-9828056 MS.gene015207:CDS 35.0%
! TGTTTTCAAAAAGCTGAGGA+TGG - chr5.4:9828689-9828708 MS.gene015207:CDS 35.0%
!! ATGCTCGATTTGGAAACAAA+TGG - chr5.4:9828012-9828031 MS.gene015207:CDS 35.0%
!! TGCTCGATTTGGAAACAAAT+GGG - chr5.4:9828013-9828032 MS.gene015207:CDS 35.0%
!!! GATGCCATTTAGTTTTAGTG+CGG - chr5.4:9828586-9828605 MS.gene015207:CDS 35.0%
AATGCTTTGGTGAAGCGAAT+TGG - chr5.4:9828719-9828738 MS.gene015207:CDS 40.0%
AGATGATTAGAACAGAGGTG+AGG - chr5.4:9828630-9828649 MS.gene015207:CDS 40.0%
GGAAATCATGCAGATTACGT+TGG - chr5.4:9827916-9827935 MS.gene015207:CDS 40.0%
GGATGGAATTAGGAATGCTT+TGG - chr5.4:9828706-9828725 MS.gene015207:CDS 40.0%
GTAGTCATTACCGGAATCAA+AGG + chr5.4:9828518-9828537 None:intergenic 40.0%
! ACAATAGCCAGGCTTTTATC+GGG - chr5.4:9828038-9828057 MS.gene015207:CDS 40.0%
! AGTGAGAGTGATAACGAAGT+TGG + chr5.4:9828386-9828405 None:intergenic 40.0%
! CTAACAGATCTTTTCAACGG+TGG + chr5.4:9828149-9828168 None:intergenic 40.0%
! TGAAGCACTTCAAAAACTCG+TGG - chr5.4:9827836-9827855 MS.gene015207:CDS 40.0%
! TGAAGTGCTTCATCTTCTTC+TGG + chr5.4:9827828-9827847 None:intergenic 40.0%
! TTTCACCACAAGTTGAGCAT+CGG - chr5.4:9827949-9827968 MS.gene015207:CDS 40.0%
AACAGAGGTGAGGAGTTACA+TGG - chr5.4:9828640-9828659 MS.gene015207:CDS 45.0%
AAGTGCGATCCCTTTGATTC+CGG - chr5.4:9828505-9828524 MS.gene015207:CDS 45.0%
ACTGATCCCGATTGTTGCAT+CGG + chr5.4:9828566-9828585 None:intergenic 45.0%
AGAAGGAGAACCAGGAGAAT+TGG + chr5.4:9828216-9828235 None:intergenic 45.0%
AGTGTTCACAATAGGTACGC+TGG + chr5.4:9828258-9828277 None:intergenic 45.0%
ATCAACACCAACACCAACAC+CGG + chr5.4:9828411-9828430 None:intergenic 45.0%
ATCTGCATGATTTCCCTGAC+CGG + chr5.4:9827911-9827930 None:intergenic 45.0%
CAAAAACTCGTGGAGAAGCA+CGG - chr5.4:9827846-9827865 MS.gene015207:CDS 45.0%
GCAGGAGATGATTAGAACAG+AGG - chr5.4:9828625-9828644 MS.gene015207:CDS 45.0%
TCATCTTCTTCTGGACTCCA+TGG + chr5.4:9827819-9827838 None:intergenic 45.0%
TCGTTATCACTCTCACTTCC+CGG - chr5.4:9828389-9828408 MS.gene015207:CDS 45.0%
TGTTGACAGGCTCAGTTACA+CGG + chr5.4:9828454-9828473 None:intergenic 45.0%
! AAAAACTCGTGGAGAAGCAC+GGG - chr5.4:9827847-9827866 MS.gene015207:CDS 45.0%
! AATTCTCCTGGTTCTCCTTC+TGG - chr5.4:9828215-9828234 MS.gene015207:CDS 45.0%
! GAGAGTGATAACGAAGTTGG+AGG + chr5.4:9828383-9828402 None:intergenic 45.0%
! TTCACCACAAGTTGAGCATC+GGG - chr5.4:9827950-9827969 MS.gene015207:CDS 45.0%
!! ACAAATGGGCTACAATAGCC+AGG - chr5.4:9828027-9828046 MS.gene015207:CDS 45.0%
!! GCTGCTATTCCTGTTTCTAC+TGG - chr5.4:9828176-9828195 MS.gene015207:CDS 45.0%
AAAGCCCGATGCTCAACTTG+TGG + chr5.4:9827957-9827976 None:intergenic 50.0%
AGAGGTGAGGAGTTACATGG+CGG - chr5.4:9828643-9828662 MS.gene015207:CDS 50.0%
ATCAAAGGGATCGCACTTGG+CGG + chr5.4:9828503-9828522 None:intergenic 50.0%
ATCAGAGCCCATGCTCGATT+TGG - chr5.4:9828002-9828021 MS.gene015207:CDS 50.0%
CGGGATTGGAGCAACAGAAT+GGG - chr5.4:9828663-9828682 MS.gene015207:CDS 50.0%
GGAACAGCCGTAGTCATTAC+CGG + chr5.4:9828527-9828546 None:intergenic 50.0%
GGAATCAAAGGGATCGCACT+TGG + chr5.4:9828506-9828525 None:intergenic 50.0%
GGAGTTGTTGAGTGTGATGC+AGG - chr5.4:9828607-9828626 MS.gene015207:CDS 50.0%
GTCGTTTCTACGAGTGGTAG+AGG + chr5.4:9828329-9828348 None:intergenic 50.0%
TAAGCAAATCGATACCGGGC+CGG - chr5.4:9827889-9827908 MS.gene015207:CDS 50.0%
TCAACACCAACACCAACACC+GGG + chr5.4:9828410-9828429 None:intergenic 50.0%
TGGATCGGATCAAAGGTCCA+TGG - chr5.4:9827799-9827818 MS.gene015207:CDS 50.0%
AGTTCGGCCCGATAAAAGCC+TGG + chr5.4:9828048-9828067 None:intergenic 55.0%
GACGACGTCGTTTCTACGAG+TGG + chr5.4:9828335-9828354 None:intergenic 55.0%
GAGGTGAGGAGTTACATGGC+GGG - chr5.4:9828644-9828663 MS.gene015207:CDS 55.0%
GCGGGATTGGAGCAACAGAA+TGG - chr5.4:9828662-9828681 MS.gene015207:CDS 55.0%
GCGGTTCCGATGCAACAATC+GGG - chr5.4:9828557-9828576 MS.gene015207:CDS 55.0%
GGCGGTTCCGATGCAACAAT+CGG - chr5.4:9828556-9828575 MS.gene015207:CDS 55.0%
TACGCTGGACTCGCTCACAT+CGG + chr5.4:9828243-9828262 None:intergenic 55.0%
TACGGCTGTTCCTGTTCCGA+TGG - chr5.4:9828535-9828554 MS.gene015207:CDS 55.0%
TCACTCTCACTTCCCGGTGT+TGG - chr5.4:9828395-9828414 MS.gene015207:CDS 55.0%
TCGCTCACATCGGATCCAGA+AGG + chr5.4:9828233-9828252 None:intergenic 55.0%
TCGGATCCAGAAGGAGAACC+AGG + chr5.4:9828224-9828243 None:intergenic 55.0%
TGTTGCATCGGAACCGCCAT+CGG + chr5.4:9828554-9828573 None:intergenic 55.0%
! GAGGAGTTACATGGCGGGAT+TGG - chr5.4:9828649-9828668 MS.gene015207:CDS 55.0%
! TCGGGCTTTTACGCCTGAAG+AGG - chr5.4:9827968-9827987 MS.gene015207:CDS 55.0%
!! GGTGGTGGTACAGTGTTGAC+AGG + chr5.4:9828467-9828486 None:intergenic 55.0%
!! TCACTTCCCGGTGTTGGTGT+TGG - chr5.4:9828401-9828420 MS.gene015207:CDS 55.0%
AAAGGGATCGCACTTGGCGG+TGG + chr5.4:9828500-9828519 None:intergenic 60.0%
AAATCGATACCGGGCCGGTC+AGG - chr5.4:9827894-9827913 MS.gene015207:CDS 60.0%
AATCGATACCGGGCCGGTCA+GGG - chr5.4:9827895-9827914 MS.gene015207:CDS 60.0%
ATCGGAACCGCCATCGGAAC+AGG + chr5.4:9828548-9828567 None:intergenic 60.0%
CATGATTTCCCTGACCGGCC+CGG + chr5.4:9827906-9827925 None:intergenic 60.0%
CGGTTCTCGTTGGCACAGGT+CGG + chr5.4:9828301-9828320 None:intergenic 60.0%
GGCTGTTCCTGTTCCGATGG+CGG - chr5.4:9828538-9828557 MS.gene015207:CDS 60.0%
! AGAAGCACGGGCCGAGAAAC+TGG - chr5.4:9827859-9827878 MS.gene015207:CDS 60.0%
! TACGAGTGGTAGAGGCGCGA+CGG + chr5.4:9828321-9828340 None:intergenic 60.0%
GCGACGGTTCTCGTTGGCAC+AGG + chr5.4:9828305-9828324 None:intergenic 65.0%
! AGAGGCGCGACGGTTCTCGT+TGG + chr5.4:9828311-9828330 None:intergenic 65.0%
! ATCGCACTTGGCGGTGGTGG+CGG + chr5.4:9828494-9828513 None:intergenic 65.0%
GGGATCGCACTTGGCGGTGG+TGG + chr5.4:9828497-9828516 None:intergenic 70.0%
!! CTTGGCGGTGGTGGCGGAGG+AGG + chr5.4:9828488-9828507 None:intergenic 75.0%
!! GCACTTGGCGGTGGTGGCGG+AGG + chr5.4:9828491-9828510 None:intergenic 75.0%
!! GGTGGTGGCGGAGGAGGTGG+TGG + chr5.4:9828482-9828501 None:intergenic 75.0%
!!! GGCGGTGGTGGCGGAGGAGG+TGG + chr5.4:9828485-9828504 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 9827798 9828763 9827798 ID=MS.gene015207
chr5.4 mRNA 9827798 9828763 9827798 ID=MS.gene015207.t1;Parent=MS.gene015207
chr5.4 exon 9827798 9828763 9827798 ID=MS.gene015207.t1.exon1;Parent=MS.gene015207.t1
chr5.4 CDS 9827798 9828763 9827798 ID=cds.MS.gene015207.t1;Parent=MS.gene015207.t1
Gene Sequence

>MS.gene015207

ATGGATCGGATCAAAGGTCCATGGAGTCCAGAAGAAGATGAAGCACTTCAAAAACTCGTGGAGAAGCACGGGCCGAGAAACTGGTCGATTATAAGCAAATCGATACCGGGCCGGTCAGGGAAATCATGCAGATTACGTTGGTGTAATCAGCTTTCACCACAAGTTGAGCATCGGGCTTTTACGCCTGAAGAGGATGATACTATAATCAGAGCCCATGCTCGATTTGGAAACAAATGGGCTACAATAGCCAGGCTTTTATCGGGCCGAACTGATAACGCTATTAAGAATCATTGGAACTCTACTTTGAAACGTAAGTGTTCTTCTATTATGATTGATGATTCTGAATCTCCACCGTTGAAAAGATCTGTTAGTGCTGGTGCTGCTATTCCTGTTTCTACTGGTCTTTATATTAACGCCAATTCTCCTGGTTCTCCTTCTGGATCCGATGTGAGCGAGTCCAGCGTACCTATTGTGAACACTCATGTTAACTCTCATGTTTACCGACCTGTGCCAACGAGAACCGTCGCGCCTCTACCACTCGTAGAAACGACGTCGTCTTCCAAATCTTCGAAATCGAACGATCCTCCAACTTCGTTATCACTCTCACTTCCCGGTGTTGGTGTTGGTGTTGATTCTTCTTCTGAAGATTCAAACCGTGTAACTGAGCCTGTCAACACTGTACCACCACCTCCTCCGCCACCACCGCCAAGTGCGATCCCTTTGATTCCGGTAATGACTACGGCTGTTCCTGTTCCGATGGCGGTTCCGATGCAACAATCGGGATCAGTGATGCCATTTAGTTTTAGTGCGGAGTTGTTGAGTGTGATGCAGGAGATGATTAGAACAGAGGTGAGGAGTTACATGGCGGGATTGGAGCAACAGAATGGGATGTGTTTTCAAAAAGCTGAGGATGGAATTAGGAATGCTTTGGTGAAGCGAATTGGAATTAGCAGAATCGATTCGTAA
Protein sequence

>MS.gene015207.t1

MDRIKGPWSPEEDEALQKLVEKHGPRNWSIISKSIPGRSGKSCRLRWCNQLSPQVEHRAFTPEEDDTIIRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCSSIMIDDSESPPLKRSVSAGAAIPVSTGLYINANSPGSPSGSDVSESSVPIVNTHVNSHVYRPVPTRTVAPLPLVETTSSSKSSKSNDPPTSLSLSLPGVGVGVDSSSEDSNRVTEPVNTVPPPPPPPPPSAIPLIPVMTTAVPVPMAVPMQQSGSVMPFSFSAELLSVMQEMIRTEVRSYMAGLEQQNGMCFQKAEDGIRNALVKRIGISRIDS