Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015264.t1 | AES94520.2 | 90.3 | 319 | 29 | 2 | 1 | 318 | 1 | 318 | 1.20E-123 | 453 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015264.t1 | Q8VWK4 | 49.8 | 247 | 116 | 5 | 1 | 242 | 1 | 244 | 3.4e-55 | 216.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015264.t1 | G7K2G9 | 90.3 | 319 | 29 | 2 | 1 | 318 | 1 | 318 | 8.5e-124 | 453.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene015264.t1 | TF | MYB-related |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015264.t1 | MTR_5g015340 | 98.635 | 293 | 4 | 0 | 1 | 293 | 1 | 293 | 0.0 | 584 |
| MS.gene015264.t1 | MTR_5g015340 | 98.635 | 293 | 4 | 0 | 1 | 293 | 1 | 293 | 0.0 | 584 |
| MS.gene015264.t1 | MTR_5g015340 | 92.331 | 326 | 9 | 2 | 1 | 318 | 1 | 318 | 0.0 | 511 |
| MS.gene015264.t1 | MTR_4g097130 | 65.161 | 310 | 91 | 6 | 1 | 294 | 1 | 309 | 2.81e-103 | 305 |
| MS.gene015264.t1 | MTR_4g097130 | 65.049 | 309 | 91 | 6 | 1 | 293 | 1 | 308 | 1.12e-101 | 301 |
| MS.gene015264.t1 | MTR_4g097130 | 63.694 | 314 | 92 | 6 | 1 | 293 | 1 | 313 | 2.41e-100 | 298 |
| MS.gene015264.t1 | MTR_2g031870 | 48.548 | 241 | 117 | 5 | 1 | 236 | 1 | 239 | 1.83e-65 | 208 |
| MS.gene015264.t1 | MTR_8g494240 | 50.584 | 257 | 122 | 5 | 1 | 254 | 1 | 255 | 2.66e-62 | 200 |
| MS.gene015264.t1 | MTR_8g494240 | 50.584 | 257 | 122 | 5 | 1 | 254 | 1 | 255 | 2.87e-62 | 200 |
| MS.gene015264.t1 | MTR_8g494240 | 50.584 | 257 | 122 | 5 | 1 | 254 | 1 | 255 | 5.74e-61 | 200 |
| MS.gene015264.t1 | MTR_8g092810 | 40.711 | 253 | 136 | 4 | 1 | 240 | 1 | 252 | 3.81e-50 | 173 |
| MS.gene015264.t1 | MTR_2g031870 | 45.205 | 292 | 127 | 6 | 1 | 287 | 1 | 264 | 1.80e-43 | 150 |
| MS.gene015264.t1 | MTR_0095s0040 | 49.677 | 155 | 72 | 4 | 1 | 149 | 1 | 155 | 9.96e-38 | 135 |
| MS.gene015264.t1 | MTR_1g041765 | 66.292 | 89 | 28 | 1 | 1 | 89 | 1 | 87 | 1.83e-32 | 120 |
| MS.gene015264.t1 | MTR_8g018410 | 32.509 | 283 | 160 | 6 | 1 | 270 | 1 | 265 | 2.99e-31 | 119 |
| MS.gene015264.t1 | MTR_2g099610 | 36.681 | 229 | 84 | 7 | 1 | 187 | 1 | 210 | 3.43e-31 | 119 |
| MS.gene015264.t1 | MTR_1g088180 | 38.843 | 121 | 70 | 2 | 121 | 241 | 295 | 411 | 2.04e-14 | 73.9 |
| MS.gene015264.t1 | MTR_3g467090 | 60.377 | 53 | 17 | 2 | 5 | 56 | 569 | 618 | 1.65e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015264.t1 | AT5G67580 | 53.242 | 293 | 133 | 1 | 1 | 289 | 1 | 293 | 2.20e-74 | 231 |
| MS.gene015264.t1 | AT5G67580 | 53.242 | 293 | 133 | 1 | 1 | 289 | 1 | 293 | 2.20e-74 | 231 |
| MS.gene015264.t1 | AT1G49950 | 49.383 | 243 | 115 | 5 | 1 | 238 | 1 | 240 | 9.85e-71 | 222 |
| MS.gene015264.t1 | AT1G49950 | 49.383 | 243 | 115 | 5 | 1 | 238 | 1 | 240 | 9.85e-71 | 222 |
| MS.gene015264.t1 | AT1G49950 | 49.383 | 243 | 115 | 5 | 1 | 238 | 1 | 240 | 9.85e-71 | 222 |
| MS.gene015264.t1 | AT3G49850 | 50.847 | 295 | 133 | 5 | 1 | 289 | 1 | 289 | 3.31e-65 | 207 |
| MS.gene015264.t1 | AT3G49850 | 50.847 | 295 | 133 | 5 | 1 | 289 | 1 | 289 | 3.31e-65 | 207 |
| MS.gene015264.t1 | AT1G72740 | 33.798 | 287 | 167 | 5 | 1 | 284 | 1 | 267 | 3.22e-31 | 119 |
| MS.gene015264.t1 | AT1G72740 | 33.798 | 287 | 173 | 6 | 1 | 284 | 1 | 273 | 1.32e-29 | 114 |
| MS.gene015264.t1 | AT1G17520 | 36.500 | 200 | 110 | 3 | 1 | 187 | 1 | 196 | 2.56e-29 | 114 |
| MS.gene015264.t1 | AT1G17520 | 32.990 | 291 | 161 | 7 | 1 | 275 | 1 | 273 | 8.43e-29 | 112 |
| MS.gene015264.t1 | AT1G17520 | 36.816 | 201 | 109 | 4 | 1 | 187 | 1 | 197 | 1.20e-28 | 112 |
| MS.gene015264.t1 | AT1G17520 | 33.219 | 292 | 160 | 8 | 1 | 275 | 1 | 274 | 4.11e-28 | 110 |
Find 77 sgRNAs with CRISPR-Local
Find 274 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTAAGCCTCTTTCAGTTTC+TGG | 0.037607 | 5.4:+9018159 | MS.gene015264:CDS |
| GGCTTAGGAGCTGCAACTTC+TGG | 0.214227 | 5.4:-9018144 | None:intergenic |
| AATGCAGAAGACTTAATATT+TGG | 0.225595 | 5.4:+9020694 | MS.gene015264:CDS |
| CGCAAAATGGTGCTGAAATC+TGG | 0.244024 | 5.4:-9017724 | None:intergenic |
| TAACCTTGATATTTGTTCTT+TGG | 0.249384 | 5.4:-9018196 | None:intergenic |
| ACATAAATGTGACTGCAATA+TGG | 0.284211 | 5.4:+9018019 | MS.gene015264:CDS |
| GAACCAGTTTGGTTTGATTC+AGG | 0.293852 | 5.4:-9021394 | None:intergenic |
| TTCTGGATTATATTGAACTA+TGG | 0.296937 | 5.4:-9018127 | None:intergenic |
| CAGGTGAAGCCATTGAAGTT+TGG | 0.341585 | 5.4:-9021375 | None:intergenic |
| ATTTGAACGCATGCGCAAAA+TGG | 0.355071 | 5.4:-9017737 | None:intergenic |
| CATAAATGTGACTGCAATAT+GGG | 0.356271 | 5.4:+9018020 | MS.gene015264:CDS |
| TGACAATCGAGTCGAATATA+AGG | 0.364822 | 5.4:-9018737 | None:intergenic |
| TCAAATACGGGGCTGGAAAA+TGG | 0.375403 | 5.4:+9017683 | MS.gene015264:CDS |
| TCTGCAGTCCATTTCTGCTT+AGG | 0.379164 | 5.4:-9017631 | None:intergenic |
| GAACTATGGCGGTCGAGGTT+GGG | 0.406154 | 5.4:-9018113 | None:intergenic |
| AGCAGCTGCAAAAGCAGTTG+CGG | 0.409911 | 5.4:+9020560 | MS.gene015264:CDS |
| GACAGTAACTTTATGAGGTT+TGG | 0.411444 | 5.4:-9019901 | None:intergenic |
| CGCCATTGCTGCTTATATAG+AGG | 0.411827 | 5.4:+9018791 | MS.gene015264:CDS |
| ATCGGAGCACTGAACCAGTT+TGG | 0.415307 | 5.4:-9021405 | None:intergenic |
| ATGCTCTTCCTTGTTACTCC+TGG | 0.423977 | 5.4:+9020419 | MS.gene015264:CDS |
| TGGGTGCTCCTAAGCAGAAA+TGG | 0.425779 | 5.4:+9017623 | MS.gene015264:CDS |
| GAAGAGGCAGCTCTGAAAGC+TGG | 0.428221 | 5.4:+9017655 | MS.gene015264:CDS |
| AGCTGCAAAAGCAGTTGCGG+AGG | 0.430575 | 5.4:+9020563 | MS.gene015264:CDS |
| TTGTTGACAGTAACTTTATG+AGG | 0.436494 | 5.4:-9019906 | None:intergenic |
| CCAGAAACTGAAAGAGGCTT+AGG | 0.456807 | 5.4:-9018159 | None:intergenic |
| TCACCTGAATCAAACCAAAC+TGG | 0.460815 | 5.4:+9021391 | MS.gene015264:CDS |
| CGACTCGATTGTCAAGTTGA+AGG | 0.467379 | 5.4:+9018746 | MS.gene015264:CDS |
| GAAGCCATTGAAGTTTGGTT+CGG | 0.467649 | 5.4:-9021370 | None:intergenic |
| TGAACTATGGCGGTCGAGGT+TGG | 0.475508 | 5.4:-9018114 | None:intergenic |
| AAAGCTGGAGTAGTCAAATA+CGG | 0.485337 | 5.4:+9017670 | MS.gene015264:CDS |
| GTCAACAAAACTGAAGCATA+TGG | 0.488294 | 5.4:+9019921 | MS.gene015264:CDS |
| TAAGCTATGAACAGGACAAA+TGG | 0.495183 | 5.4:+9017992 | MS.gene015264:intron |
| TGACTGCAATATGGGGATCC+AGG | 0.496295 | 5.4:+9018028 | MS.gene015264:CDS |
| AAGCCTCTTTCAGTTTCTGG+TGG | 0.504900 | 5.4:+9018162 | MS.gene015264:CDS |
| CTTCCTTGTTACTCCTGGAA+GGG | 0.505904 | 5.4:+9020424 | MS.gene015264:CDS |
| GAAATCTGGGTCTGTAAGAA+TGG | 0.507475 | 5.4:-9017710 | None:intergenic |
| GCGGCAATGTCAGAACCCTT+TGG | 0.508392 | 5.4:-9018771 | None:intergenic |
| TCTTCCTTGTTACTCCTGGA+AGG | 0.509910 | 5.4:+9020423 | MS.gene015264:CDS |
| TTATGAGGTTTGGTGGAGAC+CGG | 0.510215 | 5.4:-9019891 | None:intergenic |
| GACAGGTAAATCATAAGTAC+AGG | 0.511866 | 5.4:+9020358 | MS.gene015264:intron |
| AGTAACTTTATGAGGTTTGG+TGG | 0.512273 | 5.4:-9019898 | None:intergenic |
| TGCTGTCTCAGCCTCAGCAA+TGG | 0.514472 | 5.4:-9020595 | None:intergenic |
| GGCTGAGACAGCAGCAAGGG+AGG | 0.514772 | 5.4:+9020605 | MS.gene015264:CDS |
| TGGCGGTCGAGGTTGGGTGG+TGG | 0.532625 | 5.4:-9018107 | None:intergenic |
| GGAGTAGTCAAATACGGGGC+TGG | 0.532847 | 5.4:+9017676 | MS.gene015264:CDS |
| CTTCCAAAGAACAAATATCA+AGG | 0.532967 | 5.4:+9018193 | MS.gene015264:CDS |
| AAGCTGGAGTAGTCAAATAC+GGG | 0.536563 | 5.4:+9017671 | MS.gene015264:CDS |
| GCAAAATGGTGCTGAAATCT+GGG | 0.539501 | 5.4:-9017723 | None:intergenic |
| ATATTGAACTATGGCGGTCG+AGG | 0.543535 | 5.4:-9018118 | None:intergenic |
| CCTTGTTACTCCTGGAAGGG+AGG | 0.547136 | 5.4:+9020427 | MS.gene015264:CDS |
| GGCAGAAGCTGCCATTGCTG+AGG | 0.547830 | 5.4:+9020584 | MS.gene015264:CDS |
| AAATCCGAACCAAACTTCAA+TGG | 0.548942 | 5.4:+9021366 | MS.gene015264:CDS |
| TACCTCTATATAAGCAGCAA+TGG | 0.560953 | 5.4:-9018793 | None:intergenic |
| TGAGGCTGAGACAGCAGCAA+GGG | 0.562956 | 5.4:+9020602 | MS.gene015264:CDS |
| CTATGGCGGTCGAGGTTGGG+TGG | 0.567809 | 5.4:-9018110 | None:intergenic |
| TTCTGCTTAGGAGCACCCAT+TGG | 0.569658 | 5.4:-9017619 | None:intergenic |
| TACCTCAATAGGATCAATAC+CGG | 0.570066 | 5.4:+9019872 | MS.gene015264:intron |
| GAAATGGACTGCAGAAGAAG+AGG | 0.574527 | 5.4:+9017639 | MS.gene015264:CDS |
| ATTCCACCAGAAACTGAAAG+AGG | 0.576366 | 5.4:-9018165 | None:intergenic |
| TGTCAAGTTGAAGGAGCCAA+AGG | 0.577322 | 5.4:+9018755 | MS.gene015264:CDS |
| GTATTGAAACCATAGTCAAT+CGG | 0.577926 | 5.4:-9021423 | None:intergenic |
| GCGTTCAAATGTAGATCTCA+AGG | 0.582023 | 5.4:+9017750 | MS.gene015264:CDS |
| CTCTATATAAGCAGCAATGG+CGG | 0.582614 | 5.4:-9018790 | None:intergenic |
| GTCAAGTTGAAGGAGCCAAA+GGG | 0.586146 | 5.4:+9018756 | MS.gene015264:CDS |
| GAGGGGTGTGACAGCTCAAG+AGG | 0.591616 | 5.4:+9020530 | MS.gene015264:CDS |
| CCTCCCTTCCAGGAGTAACA+AGG | 0.596501 | 5.4:-9020427 | None:intergenic |
| CTGAGGCTGAGACAGCAGCA+AGG | 0.616768 | 5.4:+9020601 | MS.gene015264:CDS |
| AACAGCTGAAGCTGAAGCAG+AGG | 0.618779 | 5.4:+9020632 | MS.gene015264:CDS |
| GTTTGCAAAAGCAGCAACGA+AGG | 0.621698 | 5.4:+9020665 | MS.gene015264:CDS |
| CTGAAGCATATGGTGGCAAG+CGG | 0.627992 | 5.4:+9019931 | MS.gene015264:CDS |
| AATATGGGGATCCAGGCAGA+AGG | 0.633799 | 5.4:+9018035 | MS.gene015264:CDS |
| TGGATTATATTGAACTATGG+CGG | 0.635820 | 5.4:-9018124 | None:intergenic |
| GGCAAGCGGCAAATTAGTGA+AGG | 0.638026 | 5.4:+9019945 | MS.gene015264:CDS |
| GCTATGAACAGGACAAATGG+AGG | 0.639785 | 5.4:+9017995 | MS.gene015264:intron |
| ATAAATGTGACTGCAATATG+GGG | 0.648699 | 5.4:+9018021 | MS.gene015264:CDS |
| AACAAAACTGAAGCATATGG+TGG | 0.677408 | 5.4:+9019924 | MS.gene015264:CDS |
| AGCTGGAGTAGTCAAATACG+GGG | 0.718064 | 5.4:+9017672 | MS.gene015264:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAGCATTATAAAAAATT+AGG | - | chr5.4:9020973-9020992 | None:intergenic | 10.0% |
| !! | AGTTAACTTTATAAAAAATT+AGG | - | chr5.4:9020824-9020843 | None:intergenic | 10.0% |
| !! | ATTAGCATTATAAAAAATTA+GGG | - | chr5.4:9020972-9020991 | None:intergenic | 10.0% |
| !! | GTTAACTTTATAAAAAATTA+GGG | - | chr5.4:9020823-9020842 | None:intergenic | 10.0% |
| !! | AAGTAATTTAATATGATACT+TGG | + | chr5.4:9020305-9020324 | MS.gene015264:intron | 15.0% |
| !! | AGTAAAATTATTGTTATGTT+AGG | + | chr5.4:9017819-9017838 | MS.gene015264:intron | 15.0% |
| !! | AGTAATATAGGTTTATTAAA+AGG | - | chr5.4:9020267-9020286 | None:intergenic | 15.0% |
| !! | ATAAACAACATATAAATCAA+TGG | - | chr5.4:9019544-9019563 | None:intergenic | 15.0% |
| !! | TATTTATCTTACAGTAATAT+AGG | - | chr5.4:9020279-9020298 | None:intergenic | 15.0% |
| !!! | CATTAATTCATTTAAAACTT+TGG | - | chr5.4:9018394-9018413 | None:intergenic | 15.0% |
| !!! | TAAAAGTATTTTAAACTCTT+TGG | + | chr5.4:9019054-9019073 | MS.gene015264:intron | 15.0% |
| !! | ATATCCAATAAATTATTCAG+TGG | - | chr5.4:9020069-9020088 | None:intergenic | 20.0% |
| !! | ATTGGTAAAGAGAAATTAAT+TGG | + | chr5.4:9020135-9020154 | MS.gene015264:intron | 20.0% |
| !! | GAAAAACTTAGATATTAATG+AGG | + | chr5.4:9019406-9019425 | MS.gene015264:intron | 20.0% |
| !! | GATTATATATACCATTAATG+AGG | - | chr5.4:9018834-9018853 | None:intergenic | 20.0% |
| !! | TATTACTGTAAGATAAATAC+TGG | + | chr5.4:9020280-9020299 | MS.gene015264:intron | 20.0% |
| !! | TCATATTAAACTATATACCT+AGG | + | chr5.4:9017942-9017961 | MS.gene015264:intron | 20.0% |
| !! | TGAATACAAAAAATCTGTTA+TGG | + | chr5.4:9020173-9020192 | MS.gene015264:intron | 20.0% |
| !! | TTACACTTTATAGAACTAAA+TGG | + | chr5.4:9018242-9018261 | MS.gene015264:intron | 20.0% |
| !! | TTATTGGATATTGAATGTTA+TGG | + | chr5.4:9020078-9020097 | MS.gene015264:intron | 20.0% |
| !!! | AAAAAACTGCTCTAATATTT+TGG | - | chr5.4:9019628-9019647 | None:intergenic | 20.0% |
| !!! | AAACATTTTGTAGTTGTAAT+TGG | - | chr5.4:9018579-9018598 | None:intergenic | 20.0% |
| !!! | TCTTTTTAATAATGACAGAT+TGG | + | chr5.4:9018710-9018729 | MS.gene015264:intron | 20.0% |
| !!! | TTTTAACACAATTACAAACA+TGG | - | chr5.4:9021073-9021092 | None:intergenic | 20.0% |
| ! | AATGCAGAAGACTTAATATT+TGG | + | chr5.4:9020694-9020713 | MS.gene015264:CDS | 25.0% |
| ! | AGTTATTAGCAGAAAATGAT+TGG | + | chr5.4:9020117-9020136 | MS.gene015264:intron | 25.0% |
| ! | ATGCATTAAGTAATGTTTCT+TGG | - | chr5.4:9020732-9020751 | None:intergenic | 25.0% |
| ! | GAACTAAACTACAAAAAAGT+TGG | + | chr5.4:9021341-9021360 | MS.gene015264:CDS | 25.0% |
| ! | GTTCTATCATAAACCTTATT+TGG | - | chr5.4:9019434-9019453 | None:intergenic | 25.0% |
| ! | TAACCTTGATATTTGTTCTT+TGG | - | chr5.4:9018199-9018218 | None:intergenic | 25.0% |
| ! | TAACTGTTTACTTTATCACA+AGG | + | chr5.4:9017878-9017897 | MS.gene015264:intron | 25.0% |
| ! | TATAATAGTTATCAGCTCTA+AGG | + | chr5.4:9018343-9018362 | MS.gene015264:intron | 25.0% |
| ! | TATGAAGGAATTGGAATAAA+TGG | - | chr5.4:9018957-9018976 | None:intergenic | 25.0% |
| ! | TATTAATGAGGATCCAAATA+AGG | + | chr5.4:9019418-9019437 | MS.gene015264:intron | 25.0% |
| ! | TTAAGTAATGTTTCTTGGTA+AGG | - | chr5.4:9020727-9020746 | None:intergenic | 25.0% |
| ! | TTCTGGATTATATTGAACTA+TGG | - | chr5.4:9018130-9018149 | None:intergenic | 25.0% |
| !! | AAACAAGTTGCAAACAATTT+TGG | + | chr5.4:9018418-9018437 | MS.gene015264:intron | 25.0% |
| !! | GTTTCTCATATAGTTTTTCT+AGG | - | chr5.4:9019380-9019399 | None:intergenic | 25.0% |
| !!! | ATGTTGAGCTTTTAAAAATG+AGG | + | chr5.4:9020511-9020530 | MS.gene015264:CDS | 25.0% |
| !!! | CATCAATTTGAGATTTTGAA+AGG | - | chr5.4:9020494-9020513 | None:intergenic | 25.0% |
| !!! | TGGTGGTTATTTTCATTTTT+CGG | - | chr5.4:9018093-9018112 | None:intergenic | 25.0% |
| !!! | TGTTGAGCTTTTAAAAATGA+GGG | + | chr5.4:9020512-9020531 | MS.gene015264:CDS | 25.0% |
| !!! | TTTGTTTTAAATGTTCTAGC+AGG | + | chr5.4:9017778-9017797 | MS.gene015264:intron | 25.0% |
| AAAACAAGCATAGCAAAGAT+GGG | + | chr5.4:9019148-9019167 | MS.gene015264:intron | 30.0% | |
| AAATATCTTTCGTATTCCCA+CGG | + | chr5.4:9021127-9021146 | MS.gene015264:intron | 30.0% | |
| AAATTCACCACAATCTTAAG+GGG | - | chr5.4:9018643-9018662 | None:intergenic | 30.0% | |
| AACAAAAATCCCCTAAGATT+TGG | + | chr5.4:9021236-9021255 | MS.gene015264:intron | 30.0% | |
| AATACATTCCCAGGAATATA+TGG | + | chr5.4:9021031-9021050 | MS.gene015264:intron | 30.0% | |
| ACATAAATGTGACTGCAATA+TGG | + | chr5.4:9018019-9018038 | MS.gene015264:CDS | 30.0% | |
| ACATATAAATCAATGGACCT+AGG | - | chr5.4:9019537-9019556 | None:intergenic | 30.0% | |
| ACTGAGTGAGGAAAAAAATT+TGG | - | chr5.4:9018880-9018899 | None:intergenic | 30.0% | |
| AGAAACATTGCCAAATCTTA+GGG | - | chr5.4:9021249-9021268 | None:intergenic | 30.0% | |
| AGTTATATAGTAACACACCT+AGG | - | chr5.4:9017962-9017981 | None:intergenic | 30.0% | |
| ATAAATGTGACTGCAATATG+GGG | + | chr5.4:9018021-9018040 | MS.gene015264:CDS | 30.0% | |
| CAAATTCACCACAATCTTAA+GGG | - | chr5.4:9018644-9018663 | None:intergenic | 30.0% | |
| CATAAATGTGACTGCAATAT+GGG | + | chr5.4:9018020-9018039 | MS.gene015264:CDS | 30.0% | |
| CTGAAATTGTTTACCTCAAT+AGG | + | chr5.4:9019861-9019880 | MS.gene015264:intron | 30.0% | |
| CTGTCCACTGAATAATTTAT+TGG | + | chr5.4:9020062-9020081 | MS.gene015264:intron | 30.0% | |
| CTTATGATTTACCTGTCATT+AGG | - | chr5.4:9020355-9020374 | None:intergenic | 30.0% | |
| CTTCCAAAGAACAAATATCA+AGG | + | chr5.4:9018193-9018212 | MS.gene015264:CDS | 30.0% | |
| GAAATAATACTGCAATGCAA+AGG | + | chr5.4:9021175-9021194 | MS.gene015264:intron | 30.0% | |
| GTTAGAACTAGTTGAAATTG+TGG | - | chr5.4:9019574-9019593 | None:intergenic | 30.0% | |
| TAAAACAAGCATAGCAAAGA+TGG | + | chr5.4:9019147-9019166 | MS.gene015264:intron | 30.0% | |
| TAAATGTTCTAGCAGGTTAT+AGG | + | chr5.4:9017785-9017804 | MS.gene015264:intron | 30.0% | |
| TAGAAACATTGCCAAATCTT+AGG | - | chr5.4:9021250-9021269 | None:intergenic | 30.0% | |
| TATAGGTCAAACTGTTATGA+AGG | - | chr5.4:9018972-9018991 | None:intergenic | 30.0% | |
| TATATTCCTGGGAATGTATT+TGG | - | chr5.4:9021031-9021050 | None:intergenic | 30.0% | |
| TCAAACTGTTATGAAGGAAT+TGG | - | chr5.4:9018966-9018985 | None:intergenic | 30.0% | |
| TCAGAAAACAATATACCTTG+TGG | - | chr5.4:9018458-9018477 | None:intergenic | 30.0% | |
| TGGATTATATTGAACTATGG+CGG | - | chr5.4:9018127-9018146 | None:intergenic | 30.0% | |
| TTGTTGACAGTAACTTTATG+AGG | - | chr5.4:9019909-9019928 | None:intergenic | 30.0% | |
| ! | CATTTAAAACTTTGGTATGC+CGG | - | chr5.4:9018386-9018405 | None:intergenic | 30.0% |
| ! | TGATGATTCTTTTCTAAGCA+TGG | + | chr5.4:9018502-9018521 | MS.gene015264:intron | 30.0% |
| !! | ACTAGTTCTAACATGTAACT+CGG | + | chr5.4:9019582-9019601 | MS.gene015264:intron | 30.0% |
| !! | GGTGGTTATTTTCATTTTTC+GGG | - | chr5.4:9018092-9018111 | None:intergenic | 30.0% |
| !! | GTGGTTATTTTCATTTTTCG+GGG | - | chr5.4:9018091-9018110 | None:intergenic | 30.0% |
| !! | GTTGAGCTTTTAAAAATGAG+GGG | + | chr5.4:9020513-9020532 | MS.gene015264:CDS | 30.0% |
| !! | TAGGAGAAAGCATTCAAAAT+GGG | - | chr5.4:9020789-9020808 | None:intergenic | 30.0% |
| !! | TGGTTATTTTCATTTTTCGG+GGG | - | chr5.4:9018090-9018109 | None:intergenic | 30.0% |
| !! | TTGAGATTTTGAAAGGATGT+TGG | - | chr5.4:9020487-9020506 | None:intergenic | 30.0% |
| !!! | AGAGCAGTTTTTTCATTTGA+TGG | + | chr5.4:9019635-9019654 | MS.gene015264:intron | 30.0% |
| !!! | ATATTTTGGTACCAGAAGAA+TGG | - | chr5.4:9019614-9019633 | None:intergenic | 30.0% |
| !!! | TGGCAATGTTTTTTCAATGA+TGG | + | chr5.4:9018678-9018697 | MS.gene015264:intron | 30.0% |
| AAACAAGCATAGCAAAGATG+GGG | + | chr5.4:9019149-9019168 | MS.gene015264:intron | 35.0% | |
| AAACTTGGTTTCTTGGAACT+TGG | + | chr5.4:9019989-9020008 | MS.gene015264:intron | 35.0% | |
| AAAGCTGGAGTAGTCAAATA+CGG | + | chr5.4:9017670-9017689 | MS.gene015264:CDS | 35.0% | |
| AAATCCGAACCAAACTTCAA+TGG | + | chr5.4:9021366-9021385 | MS.gene015264:CDS | 35.0% | |
| AACAAAACTGAAGCATATGG+TGG | + | chr5.4:9019924-9019943 | MS.gene015264:CDS | 35.0% | |
| AAGAACCAACACGAGAATAA+CGG | + | chr5.4:9019093-9019112 | MS.gene015264:intron | 35.0% | |
| AATTAGGGAAAGTAACCACT+AGG | - | chr5.4:9020808-9020827 | None:intergenic | 35.0% | |
| AATTTGCAACGTCAATCATG+TGG | + | chr5.4:9018658-9018677 | MS.gene015264:intron | 35.0% | |
| ACAACATTAGAGAGAGAGTT+GGG | + | chr5.4:9019221-9019240 | MS.gene015264:intron | 35.0% | |
| ACAATATCCCCTTAAGATTG+TGG | + | chr5.4:9018633-9018652 | MS.gene015264:intron | 35.0% | |
| ACCTACAGTAGAAATGATAG+TGG | + | chr5.4:9019249-9019268 | MS.gene015264:intron | 35.0% | |
| ACTAAATGGTCTGTGATTCT+TGG | + | chr5.4:9018256-9018275 | MS.gene015264:intron | 35.0% | |
| AGTAACTTTATGAGGTTTGG+TGG | - | chr5.4:9019901-9019920 | None:intergenic | 35.0% | |
| AGTTAACCAAATACATTCCC+AGG | + | chr5.4:9021022-9021041 | MS.gene015264:intron | 35.0% | |
| ATGCATTGAGAAACGTTTCT+AGG | - | chr5.4:9020881-9020900 | None:intergenic | 35.0% | |
| ATTCCCAGGAATATATGGTA+AGG | + | chr5.4:9021036-9021055 | MS.gene015264:intron | 35.0% | |
| CCATAGAGAATAAAAACCGT+GGG | - | chr5.4:9021146-9021165 | None:intergenic | 35.0% | |
| CTCTCCTTATACAGAATCTA+CGG | - | chr5.4:9019313-9019332 | None:intergenic | 35.0% | |
| GAAACATTGCCAAATCTTAG+GGG | - | chr5.4:9021248-9021267 | None:intergenic | 35.0% | |
| GACAGGTAAATCATAAGTAC+AGG | + | chr5.4:9020358-9020377 | MS.gene015264:intron | 35.0% | |
| GACAGTAACTTTATGAGGTT+TGG | - | chr5.4:9019904-9019923 | None:intergenic | 35.0% | |
| GCAAATTCACCACAATCTTA+AGG | - | chr5.4:9018645-9018664 | None:intergenic | 35.0% | |
| GGGAGACTGAATAAAACTAT+AGG | - | chr5.4:9018989-9019008 | None:intergenic | 35.0% | |
| GTCAACAAAACTGAAGCATA+TGG | + | chr5.4:9019921-9019940 | MS.gene015264:CDS | 35.0% | |
| GTTACTGAAACTTGGTTTCT+TGG | + | chr5.4:9019982-9020001 | MS.gene015264:intron | 35.0% | |
| TAAGCTATGAACAGGACAAA+TGG | + | chr5.4:9017992-9018011 | MS.gene015264:intron | 35.0% | |
| TACCATTAATGAGGCAATCA+AGG | - | chr5.4:9018825-9018844 | None:intergenic | 35.0% | |
| TACCTCAATAGGATCAATAC+CGG | + | chr5.4:9019872-9019891 | MS.gene015264:intron | 35.0% | |
| TACCTCTATATAAGCAGCAA+TGG | - | chr5.4:9018796-9018815 | None:intergenic | 35.0% | |
| TACCTTGATTGCCTCATTAA+TGG | + | chr5.4:9018820-9018839 | MS.gene015264:intron | 35.0% | |
| TACTCTTCGTTACTGAAACT+TGG | + | chr5.4:9019974-9019993 | MS.gene015264:intron | 35.0% | |
| TAGTGGGAGTGAAATTCTAT+TGG | + | chr5.4:9020228-9020247 | MS.gene015264:intron | 35.0% | |
| TATAAGGAGAGTAGATCAGA+TGG | + | chr5.4:9019322-9019341 | MS.gene015264:intron | 35.0% | |
| TCCACTATCATTTCTACTGT+AGG | - | chr5.4:9019253-9019272 | None:intergenic | 35.0% | |
| TCCATAGAGAATAAAAACCG+TGG | - | chr5.4:9021147-9021166 | None:intergenic | 35.0% | |
| TCTCCTTATACAGAATCTAC+GGG | - | chr5.4:9019312-9019331 | None:intergenic | 35.0% | |
| TGACAATCGAGTCGAATATA+AGG | - | chr5.4:9018740-9018759 | None:intergenic | 35.0% | |
| TGTTATGGTTACACTGTTAC+TGG | + | chr5.4:9020093-9020112 | MS.gene015264:intron | 35.0% | |
| TTCCCAGGAATATATGGTAA+GGG | + | chr5.4:9021037-9021056 | MS.gene015264:intron | 35.0% | |
| TTCCCTTACCATATATTCCT+GGG | - | chr5.4:9021042-9021061 | None:intergenic | 35.0% | |
| ! | AATGGTCTGTCATTTGAGAT+AGG | - | chr5.4:9018939-9018958 | None:intergenic | 35.0% |
| ! | ACGGTTTTTATTCTCTATGG+AGG | + | chr5.4:9021146-9021165 | MS.gene015264:intron | 35.0% |
| ! | AGTCTCCCTCTAGAAAATAT+CGG | + | chr5.4:9019001-9019020 | MS.gene015264:intron | 35.0% |
| ! | ATGTGCTTTAAGCTATGAAC+AGG | + | chr5.4:9017984-9018003 | MS.gene015264:intron | 35.0% |
| ! | CGGTTTTTATTCTCTATGGA+GGG | + | chr5.4:9021147-9021166 | MS.gene015264:intron | 35.0% |
| ! | GCTATAATTTGTGTACCACA+AGG | + | chr5.4:9018440-9018459 | MS.gene015264:intron | 35.0% |
| ! | GGTTTTTATTCTCTATGGAG+GGG | + | chr5.4:9021148-9021167 | MS.gene015264:intron | 35.0% |
| ! | GTTTTTATTCTCTATGGAGG+GGG | + | chr5.4:9021149-9021168 | MS.gene015264:intron | 35.0% |
| ! | TCATTTGAGATAGGATAGTG+TGG | - | chr5.4:9018930-9018949 | None:intergenic | 35.0% |
| ! | TCTTTTCCTGCAAACTTTTG+TGG | + | chr5.4:9020028-9020047 | MS.gene015264:intron | 35.0% |
| ! | TTTTGAATGCTTTCTCCTAG+TGG | + | chr5.4:9020790-9020809 | MS.gene015264:intron | 35.0% |
| !! | AGCATTCAAAATGGGCTAAA+AGG | - | chr5.4:9020781-9020800 | None:intergenic | 35.0% |
| !! | CAGGAAAAGATACTGCTTTT+TGG | - | chr5.4:9020018-9020037 | None:intergenic | 35.0% |
| !! | CTAGGAGAAAGCATTCAAAA+TGG | - | chr5.4:9020790-9020809 | None:intergenic | 35.0% |
| !! | CTAGTTCTAACATGTAACTC+GGG | + | chr5.4:9019583-9019602 | MS.gene015264:intron | 35.0% |
| !! | CTGTTCATGGATTGGTTTAT+AGG | + | chr5.4:9021312-9021331 | MS.gene015264:intron | 35.0% |
| !! | GCATCAGTTTTATCTGCTTT+TGG | - | chr5.4:9020465-9020484 | None:intergenic | 35.0% |
| !! | GTAGAAATGATAGTGGAAAC+AGG | + | chr5.4:9019256-9019275 | MS.gene015264:intron | 35.0% |
| !! | TAGGAGAAAGCATTCAAGAT+GGG | - | chr5.4:9020938-9020957 | None:intergenic | 35.0% |
| !! | TAGTTCTAACATGTAACTCG+GGG | + | chr5.4:9019584-9019603 | MS.gene015264:intron | 35.0% |
| !! | TCTGCTTTTGGAGAATCTTT+TGG | - | chr5.4:9020453-9020472 | None:intergenic | 35.0% |
| !!! | TTATTTTCATTTTTCGGGGG+TGG | - | chr5.4:9018087-9018106 | None:intergenic | 35.0% |
| AAGCTGGAGTAGTCAAATAC+GGG | + | chr5.4:9017671-9017690 | MS.gene015264:CDS | 40.0% | |
| AATGGTCTGTGATTCTTGGT+TGG | + | chr5.4:9018260-9018279 | MS.gene015264:intron | 40.0% | |
| ACACGCACAAACTCACATAT+AGG | + | chr5.4:9018551-9018570 | MS.gene015264:intron | 40.0% | |
| ACATTCCGTTATTCTCGTGT+TGG | - | chr5.4:9019101-9019120 | None:intergenic | 40.0% | |
| AGACCCGTAGATTCTGTATA+AGG | + | chr5.4:9019306-9019325 | MS.gene015264:intron | 40.0% | |
| AGTCTGACATACCTAATGAC+AGG | + | chr5.4:9020341-9020360 | MS.gene015264:intron | 40.0% | |
| ATATGGGCATTCTCTGTAGT+GGG | + | chr5.4:9020212-9020231 | MS.gene015264:intron | 40.0% | |
| ATTCCACCAGAAACTGAAAG+AGG | - | chr5.4:9018168-9018187 | None:intergenic | 40.0% | |
| ATTTGAACGCATGCGCAAAA+TGG | - | chr5.4:9017740-9017759 | None:intergenic | 40.0% | |
| CAACATTAGAGAGAGAGTTG+GGG | + | chr5.4:9019222-9019241 | MS.gene015264:intron | 40.0% | |
| CTCTATATAAGCAGCAATGG+CGG | - | chr5.4:9018793-9018812 | None:intergenic | 40.0% | |
| GAAATCTGGGTCTGTAAGAA+TGG | - | chr5.4:9017713-9017732 | None:intergenic | 40.0% | |
| GAAGCCATTGAAGTTTGGTT+CGG | - | chr5.4:9021373-9021392 | None:intergenic | 40.0% | |
| GACAACATTAGAGAGAGAGT+TGG | + | chr5.4:9019220-9019239 | MS.gene015264:intron | 40.0% | |
| GCGTTCAAATGTAGATCTCA+AGG | + | chr5.4:9017750-9017769 | MS.gene015264:CDS | 40.0% | |
| GTCATTAGGTATGTCAGACT+AGG | - | chr5.4:9020341-9020360 | None:intergenic | 40.0% | |
| GTGGTAAGACTAGACAAGAT+AGG | + | chr5.4:9019188-9019207 | MS.gene015264:intron | 40.0% | |
| GTTCCCTTACCATATATTCC+TGG | - | chr5.4:9021043-9021062 | None:intergenic | 40.0% | |
| GTTGGAAATGTTTCTCTCCT+AGG | + | chr5.4:9019517-9019536 | MS.gene015264:intron | 40.0% | |
| TAGGGCGCATTATGAAAAGA+TGG | - | chr5.4:9021281-9021300 | None:intergenic | 40.0% | |
| TCACCTGAATCAAACCAAAC+TGG | + | chr5.4:9021391-9021410 | MS.gene015264:CDS | 40.0% | |
| TCTTGAATGCTTTCTCCTAG+TGG | + | chr5.4:9020939-9020958 | MS.gene015264:intron | 40.0% | |
| TTGTAAACTTGATCGCAAGC+AGG | - | chr5.4:9019031-9019050 | None:intergenic | 40.0% | |
| TTTCATAATGCGCCCTATCT+AGG | + | chr5.4:9021284-9021303 | MS.gene015264:intron | 40.0% | |
| ! | ACACGAGAATAACGGAATGT+TGG | + | chr5.4:9019101-9019120 | MS.gene015264:intron | 40.0% |
| ! | CACGAGAATAACGGAATGTT+GGG | + | chr5.4:9019102-9019121 | MS.gene015264:intron | 40.0% |
| ! | CCCACGGTTTTTATTCTCTA+TGG | + | chr5.4:9021143-9021162 | MS.gene015264:intron | 40.0% |
| ! | CTTAACTTTTTGCCTTCCTG+TGG | + | chr5.4:9019713-9019732 | MS.gene015264:intron | 40.0% |
| ! | GCAAAATGGTGCTGAAATCT+GGG | - | chr5.4:9017726-9017745 | None:intergenic | 40.0% |
| ! | GCTGACCGATATTTTCTAGA+GGG | - | chr5.4:9019009-9019028 | None:intergenic | 40.0% |
| ! | TAAGGCTTGATGGTTGTTGT+TGG | + | chr5.4:9019499-9019518 | MS.gene015264:intron | 40.0% |
| !! | AGCATTCAAGATGGGCTAAA+AGG | - | chr5.4:9020930-9020949 | None:intergenic | 40.0% |
| !! | CTAGGAGAAAGCATTCAAGA+TGG | - | chr5.4:9020939-9020958 | None:intergenic | 40.0% |
| !! | GAACCAGTTTGGTTTGATTC+AGG | - | chr5.4:9021397-9021416 | None:intergenic | 40.0% |
| !! | TCGTGTTGGTTCTTATACAG+AGG | - | chr5.4:9019087-9019106 | None:intergenic | 40.0% |
| !!! | GGAAGAGCATCTTCTTTTCT+CGG | - | chr5.4:9020409-9020428 | None:intergenic | 40.0% |
| AAGGAGAGTAGATCAGATGG+AGG | + | chr5.4:9019325-9019344 | MS.gene015264:intron | 45.0% | |
| AGCCTTTCTTAACCACAGGA+AGG | - | chr5.4:9019728-9019747 | None:intergenic | 45.0% | |
| AGCTGGAGTAGTCAAATACG+GGG | + | chr5.4:9017672-9017691 | MS.gene015264:CDS | 45.0% | |
| ATAATGCGCCCTATCTAGGT+AGG | + | chr5.4:9021288-9021307 | MS.gene015264:intron | 45.0% | |
| ATATTGAACTATGGCGGTCG+AGG | - | chr5.4:9018121-9018140 | None:intergenic | 45.0% | |
| ATGAACAGCCCTACCTAGAT+AGG | - | chr5.4:9021300-9021319 | None:intergenic | 45.0% | |
| ATGCTCTTCCTTGTTACTCC+TGG | + | chr5.4:9020419-9020438 | MS.gene015264:CDS | 45.0% | |
| CAGGTGAAGCCATTGAAGTT+TGG | - | chr5.4:9021378-9021397 | None:intergenic | 45.0% | |
| CAGTCGAACTACGCACATAT+GGG | + | chr5.4:9020196-9020215 | MS.gene015264:intron | 45.0% | |
| CATATGGGCATTCTCTGTAG+TGG | + | chr5.4:9020211-9020230 | MS.gene015264:intron | 45.0% | |
| CCAGAAACTGAAAGAGGCTT+AGG | - | chr5.4:9018162-9018181 | None:intergenic | 45.0% | |
| CCTAAGCCTCTTTCAGTTTC+TGG | + | chr5.4:9018159-9018178 | MS.gene015264:CDS | 45.0% | |
| CTTAGTGGGATAAGGCTTGA+TGG | + | chr5.4:9019489-9019508 | MS.gene015264:intron | 45.0% | |
| CTTCCTTGTTACTCCTGGAA+GGG | + | chr5.4:9020424-9020443 | MS.gene015264:CDS | 45.0% | |
| GAGGATAGTCAGATCACTAG+AGG | + | chr5.4:9019344-9019363 | MS.gene015264:intron | 45.0% | |
| GCTAAGCCTTTCTTAACCAC+AGG | - | chr5.4:9019732-9019751 | None:intergenic | 45.0% | |
| GCTATGAACAGGACAAATGG+AGG | + | chr5.4:9017995-9018014 | MS.gene015264:intron | 45.0% | |
| GGTTGCTTAATGCAGTATGC+CGG | + | chr5.4:9018364-9018383 | MS.gene015264:intron | 45.0% | |
| GTAACTGATCTCACTGAGTG+AGG | - | chr5.4:9018892-9018911 | None:intergenic | 45.0% | |
| GTTTGCAAAAGCAGCAACGA+AGG | + | chr5.4:9020665-9020684 | MS.gene015264:CDS | 45.0% | |
| TAATGCGCCCTATCTAGGTA+GGG | + | chr5.4:9021289-9021308 | MS.gene015264:intron | 45.0% | |
| TATCTAGGTAGGGCTGTTCA+TGG | + | chr5.4:9021299-9021318 | MS.gene015264:intron | 45.0% | |
| TCAAATACGGGGCTGGAAAA+TGG | + | chr5.4:9017683-9017702 | MS.gene015264:CDS | 45.0% | |
| TCTGCAGTCCATTTCTGCTT+AGG | - | chr5.4:9017634-9017653 | None:intergenic | 45.0% | |
| TCTTCCTTGTTACTCCTGGA+AGG | + | chr5.4:9020423-9020442 | MS.gene015264:CDS | 45.0% | |
| TGAACAGCCCTACCTAGATA+GGG | - | chr5.4:9021299-9021318 | None:intergenic | 45.0% | |
| TGCCTTCCTGTGGTTAAGAA+AGG | + | chr5.4:9019723-9019742 | MS.gene015264:intron | 45.0% | |
| TTATTCTCTATGGAGGGGGT+GGG | + | chr5.4:9021153-9021172 | MS.gene015264:intron | 45.0% | |
| TTTATTCTCTATGGAGGGGG+TGG | + | chr5.4:9021152-9021171 | MS.gene015264:intron | 45.0% | |
| ! | AAGCCTCTTTCAGTTTCTGG+TGG | + | chr5.4:9018162-9018181 | MS.gene015264:CDS | 45.0% |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr5.4:9019487-9019506 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr5.4:9019488-9019507 | None:intergenic | 45.0% |
| ! | CGCAAAATGGTGCTGAAATC+TGG | - | chr5.4:9017727-9017746 | None:intergenic | 45.0% |
| ! | CGCCATTGCTGCTTATATAG+AGG | + | chr5.4:9018791-9018810 | MS.gene015264:CDS | 45.0% |
| ! | CTGCAAACTTTTGTGGCGAA+GGG | + | chr5.4:9020035-9020054 | MS.gene015264:intron | 45.0% |
| ! | GAGAATAACGGAATGTTGGG+CGG | + | chr5.4:9019105-9019124 | MS.gene015264:intron | 45.0% |
| ! | GAGCTTAGGGGAACTTGTTT+AGG | - | chr5.4:9019673-9019692 | None:intergenic | 45.0% |
| ! | GGCTGACCGATATTTTCTAG+AGG | - | chr5.4:9019010-9019029 | None:intergenic | 45.0% |
| ! | GGTTTGAGATGCTACTGCTA+CGG | + | chr5.4:9017840-9017859 | MS.gene015264:intron | 45.0% |
| ! | GTTAAGAGCTTGTTCTTGCC+AGG | - | chr5.4:9019699-9019718 | None:intergenic | 45.0% |
| ! | TCAAGCCTTATCCCACTAAG+TGG | - | chr5.4:9019489-9019508 | None:intergenic | 45.0% |
| !! | CGACTCGATTGTCAAGTTGA+AGG | + | chr5.4:9018746-9018765 | MS.gene015264:CDS | 45.0% |
| !! | GAAATGGACTGCAGAAGAAG+AGG | + | chr5.4:9017639-9017658 | MS.gene015264:CDS | 45.0% |
| !! | GACCGGTATTGATCCTATTG+AGG | - | chr5.4:9019877-9019896 | None:intergenic | 45.0% |
| !! | GTCAAGTTGAAGGAGCCAAA+GGG | + | chr5.4:9018756-9018775 | MS.gene015264:CDS | 45.0% |
| !! | TGTCAAGTTGAAGGAGCCAA+AGG | + | chr5.4:9018755-9018774 | MS.gene015264:CDS | 45.0% |
| !! | TTATGAGGTTTGGTGGAGAC+CGG | - | chr5.4:9019894-9019913 | None:intergenic | 45.0% |
| !!! | TTTCATTTTTCGGGGGTGGT+AGG | - | chr5.4:9018083-9018102 | None:intergenic | 45.0% |
| AACAGCTGAAGCTGAAGCAG+AGG | + | chr5.4:9020632-9020651 | MS.gene015264:CDS | 50.0% | |
| AATATGGGGATCCAGGCAGA+AGG | + | chr5.4:9018035-9018054 | MS.gene015264:CDS | 50.0% | |
| ACTAAGTGGGGTCTGCTACA+TGG | - | chr5.4:9019475-9019494 | None:intergenic | 50.0% | |
| AGACCCCACTTAGTGGGATA+AGG | + | chr5.4:9019481-9019500 | MS.gene015264:intron | 50.0% | |
| AGCAGCTGCAAAAGCAGTTG+CGG | + | chr5.4:9020560-9020579 | MS.gene015264:CDS | 50.0% | |
| AGGTAGGGCTGTTCATGGAT+TGG | + | chr5.4:9021304-9021323 | MS.gene015264:intron | 50.0% | |
| AGTCAGATCACTAGAGGCAG+AGG | + | chr5.4:9019350-9019369 | MS.gene015264:intron | 50.0% | |
| ATGTAGCAGACCCCACTTAG+TGG | + | chr5.4:9019474-9019493 | MS.gene015264:intron | 50.0% | |
| CAAAGATGGGGATGTTGCGT+TGG | + | chr5.4:9019161-9019180 | MS.gene015264:intron | 50.0% | |
| CCTTCGCCACAAAAGTTTGC+AGG | - | chr5.4:9020037-9020056 | None:intergenic | 50.0% | |
| CTGAAGCATATGGTGGCAAG+CGG | + | chr5.4:9019931-9019950 | MS.gene015264:CDS | 50.0% | |
| GCAGTCGAACTACGCACATA+TGG | + | chr5.4:9020195-9020214 | MS.gene015264:intron | 50.0% | |
| GGCAAGCGGCAAATTAGTGA+AGG | + | chr5.4:9019945-9019964 | MS.gene015264:CDS | 50.0% | |
| TCTTGCCAGGTGAGAGCTTA+GGG | - | chr5.4:9019686-9019705 | None:intergenic | 50.0% | |
| TGACTGCAATATGGGGATCC+AGG | + | chr5.4:9018028-9018047 | MS.gene015264:CDS | 50.0% | |
| TGGGTGCTCCTAAGCAGAAA+TGG | + | chr5.4:9017623-9017642 | MS.gene015264:CDS | 50.0% | |
| TGTAGCAGACCCCACTTAGT+GGG | + | chr5.4:9019475-9019494 | MS.gene015264:intron | 50.0% | |
| TTCTTGCCAGGTGAGAGCTT+AGG | - | chr5.4:9019687-9019706 | None:intergenic | 50.0% | |
| ! | AATCTTTTGGCCTCCCTTCC+AGG | - | chr5.4:9020440-9020459 | None:intergenic | 50.0% |
| ! | CCTGCAAACTTTTGTGGCGA+AGG | + | chr5.4:9020034-9020053 | MS.gene015264:intron | 50.0% |
| ! | TGCAAGTTTTGCCTTCTGCC+TGG | - | chr5.4:9018049-9018068 | None:intergenic | 50.0% |
| !! | ATCGGAGCACTGAACCAGTT+TGG | - | chr5.4:9021408-9021427 | None:intergenic | 50.0% |
| !! | ATGATAGTGGAAACAGGCGC+AGG | + | chr5.4:9019262-9019281 | MS.gene015264:intron | 50.0% |
| AGCTGCAAAAGCAGTTGCGG+AGG | + | chr5.4:9020563-9020582 | MS.gene015264:CDS | 55.0% | |
| AGTTCCCCTAAGCTCTCACC+TGG | + | chr5.4:9019678-9019697 | MS.gene015264:intron | 55.0% | |
| CCTCCCTTCCAGGAGTAACA+AGG | - | chr5.4:9020430-9020449 | None:intergenic | 55.0% | |
| CCTTGTTACTCCTGGAAGGG+AGG | + | chr5.4:9020427-9020446 | MS.gene015264:CDS | 55.0% | |
| CTCGGGGACTTCCATTCTTC+TGG | + | chr5.4:9019600-9019619 | MS.gene015264:intron | 55.0% | |
| CTTGCCAGGTGAGAGCTTAG+GGG | - | chr5.4:9019685-9019704 | None:intergenic | 55.0% | |
| GAACTATGGCGGTCGAGGTT+GGG | - | chr5.4:9018116-9018135 | None:intergenic | 55.0% | |
| GCGGCAATGTCAGAACCCTT+TGG | - | chr5.4:9018774-9018793 | None:intergenic | 55.0% | |
| GGAGTAGTCAAATACGGGGC+TGG | + | chr5.4:9017676-9017695 | MS.gene015264:CDS | 55.0% | |
| GGCTTAGGAGCTGCAACTTC+TGG | - | chr5.4:9018147-9018166 | None:intergenic | 55.0% | |
| GGGATGTTGCGTTGGATGTG+TGG | + | chr5.4:9019169-9019188 | MS.gene015264:intron | 55.0% | |
| TGAACTATGGCGGTCGAGGT+TGG | - | chr5.4:9018117-9018136 | None:intergenic | 55.0% | |
| TGAGGCTGAGACAGCAGCAA+GGG | + | chr5.4:9020602-9020621 | MS.gene015264:CDS | 55.0% | |
| TGCTGTCTCAGCCTCAGCAA+TGG | - | chr5.4:9020598-9020617 | None:intergenic | 55.0% | |
| ! | ATAGTGGAAACAGGCGCAGG+TGG | + | chr5.4:9019265-9019284 | MS.gene015264:intron | 55.0% |
| !! | GAAGAGGCAGCTCTGAAAGC+TGG | + | chr5.4:9017655-9017674 | MS.gene015264:CDS | 55.0% |
| CTGAGGCTGAGACAGCAGCA+AGG | + | chr5.4:9020601-9020620 | MS.gene015264:CDS | 60.0% | |
| GGCAGAAGCTGCCATTGCTG+AGG | + | chr5.4:9020584-9020603 | MS.gene015264:CDS | 60.0% | |
| ! | GAGGGGTGTGACAGCTCAAG+AGG | + | chr5.4:9020530-9020549 | MS.gene015264:CDS | 60.0% |
| CTATGGCGGTCGAGGTTGGG+TGG | - | chr5.4:9018113-9018132 | None:intergenic | 65.0% | |
| GGCTGAGACAGCAGCAAGGG+AGG | + | chr5.4:9020605-9020624 | MS.gene015264:CDS | 65.0% | |
| TGGCGGTCGAGGTTGGGTGG+TGG | - | chr5.4:9018110-9018129 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 9017622 | 9021430 | 9017622 | ID=MS.gene015264 |
| chr5.4 | mRNA | 9017622 | 9021430 | 9017622 | ID=MS.gene015264.t1;Parent=MS.gene015264 |
| chr5.4 | exon | 9017622 | 9017771 | 9017622 | ID=MS.gene015264.t1.exon1;Parent=MS.gene015264.t1 |
| chr5.4 | CDS | 9017622 | 9017771 | 9017622 | ID=cds.MS.gene015264.t1;Parent=MS.gene015264.t1 |
| chr5.4 | exon | 9018006 | 9018214 | 9018006 | ID=MS.gene015264.t1.exon2;Parent=MS.gene015264.t1 |
| chr5.4 | CDS | 9018006 | 9018214 | 9018006 | ID=cds.MS.gene015264.t1;Parent=MS.gene015264.t1 |
| chr5.4 | exon | 9018728 | 9018812 | 9018728 | ID=MS.gene015264.t1.exon3;Parent=MS.gene015264.t1 |
| chr5.4 | CDS | 9018728 | 9018812 | 9018728 | ID=cds.MS.gene015264.t1;Parent=MS.gene015264.t1 |
| chr5.4 | exon | 9019883 | 9019966 | 9019883 | ID=MS.gene015264.t1.exon4;Parent=MS.gene015264.t1 |
| chr5.4 | CDS | 9019883 | 9019966 | 9019883 | ID=cds.MS.gene015264.t1;Parent=MS.gene015264.t1 |
| chr5.4 | exon | 9020363 | 9020715 | 9020363 | ID=MS.gene015264.t1.exon5;Parent=MS.gene015264.t1 |
| chr5.4 | CDS | 9020363 | 9020715 | 9020363 | ID=cds.MS.gene015264.t1;Parent=MS.gene015264.t1 |
| chr5.4 | exon | 9021334 | 9021430 | 9021334 | ID=MS.gene015264.t1.exon6;Parent=MS.gene015264.t1 |
| chr5.4 | CDS | 9021334 | 9021430 | 9021334 | ID=cds.MS.gene015264.t1;Parent=MS.gene015264.t1 |
| Gene Sequence |
| Protein sequence |
