Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015514.t1 | XP_003611171.1 | 94.4 | 305 | 14 | 2 | 1 | 302 | 1 | 305 | 1.40E-155 | 558.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015514.t1 | P46606 | 78.0 | 296 | 54 | 5 | 1 | 288 | 1 | 293 | 1.2e-123 | 444.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015514.t1 | G7KES2 | 94.4 | 305 | 14 | 2 | 1 | 302 | 1 | 305 | 1.0e-155 | 558.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene015514.t1 | TF | HB-KNOX |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015514.t1 | MTR_5g011070 | 98.361 | 305 | 2 | 2 | 1 | 302 | 1 | 305 | 0.0 | 614 |
| MS.gene015514.t1 | MTR_1g012960 | 70.036 | 277 | 79 | 2 | 16 | 289 | 161 | 436 | 3.27e-137 | 395 |
| MS.gene015514.t1 | MTR_3g106400 | 69.057 | 265 | 81 | 1 | 26 | 289 | 107 | 371 | 5.30e-133 | 382 |
| MS.gene015514.t1 | MTR_3g106400 | 69.057 | 265 | 81 | 1 | 26 | 289 | 107 | 371 | 5.77e-133 | 382 |
| MS.gene015514.t1 | MTR_3g106400 | 68.539 | 267 | 83 | 1 | 26 | 291 | 107 | 373 | 8.94e-133 | 384 |
| MS.gene015514.t1 | MTR_4g116545 | 68.773 | 269 | 81 | 1 | 21 | 289 | 66 | 331 | 2.07e-132 | 379 |
| MS.gene015514.t1 | MTR_2g461240 | 68.679 | 265 | 80 | 2 | 24 | 288 | 93 | 354 | 2.07e-130 | 375 |
| MS.gene015514.t1 | MTR_4g116545 | 69.141 | 256 | 76 | 1 | 21 | 276 | 66 | 318 | 4.27e-129 | 371 |
| MS.gene015514.t1 | MTR_1g084060 | 34.375 | 256 | 138 | 5 | 22 | 273 | 16 | 245 | 2.09e-32 | 121 |
| MS.gene015514.t1 | MTR_1g084060 | 34.375 | 256 | 138 | 5 | 22 | 273 | 16 | 245 | 3.55e-32 | 121 |
| MS.gene015514.t1 | MTR_1g017080 | 32.806 | 253 | 145 | 6 | 21 | 273 | 115 | 342 | 1.14e-29 | 116 |
| MS.gene015514.t1 | MTR_5g033720 | 34.387 | 253 | 132 | 6 | 25 | 273 | 72 | 294 | 1.27e-28 | 112 |
| MS.gene015514.t1 | MTR_5g085860 | 30.364 | 247 | 139 | 4 | 28 | 273 | 49 | 263 | 1.35e-23 | 98.2 |
| MS.gene015514.t1 | MTR_2g024390 | 29.317 | 249 | 148 | 4 | 25 | 273 | 117 | 337 | 1.91e-23 | 99.0 |
| MS.gene015514.t1 | MTR_7g065050 | 37.349 | 83 | 50 | 1 | 205 | 287 | 298 | 378 | 5.36e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015514.t1 | AT1G62990 | 79.252 | 294 | 51 | 5 | 1 | 288 | 1 | 290 | 2.40e-168 | 469 |
| MS.gene015514.t1 | AT5G25220 | 66.780 | 295 | 79 | 5 | 8 | 289 | 131 | 419 | 4.71e-136 | 392 |
| MS.gene015514.t1 | AT5G25220 | 66.667 | 294 | 79 | 5 | 8 | 288 | 131 | 418 | 3.37e-135 | 390 |
| MS.gene015514.t1 | AT5G11060 | 68.401 | 269 | 79 | 2 | 21 | 288 | 119 | 382 | 3.31e-132 | 381 |
| MS.gene015514.t1 | AT4G32040 | 61.592 | 289 | 94 | 6 | 13 | 289 | 96 | 379 | 2.88e-117 | 342 |
| MS.gene015514.t1 | AT4G32040 | 61.379 | 290 | 95 | 6 | 13 | 290 | 96 | 380 | 3.66e-117 | 342 |
| MS.gene015514.t1 | AT1G70510 | 33.597 | 253 | 132 | 5 | 25 | 273 | 69 | 289 | 3.56e-33 | 124 |
| MS.gene015514.t1 | AT1G70510 | 32.411 | 253 | 139 | 4 | 25 | 273 | 69 | 293 | 4.66e-32 | 121 |
| MS.gene015514.t1 | AT1G23380 | 34.800 | 250 | 133 | 6 | 25 | 273 | 85 | 305 | 5.53e-32 | 121 |
| MS.gene015514.t1 | AT1G23380 | 34.524 | 252 | 133 | 7 | 25 | 273 | 85 | 307 | 4.39e-30 | 116 |
| MS.gene015514.t1 | AT4G08150 | 30.588 | 255 | 143 | 7 | 25 | 273 | 134 | 360 | 2.92e-27 | 110 |
| MS.gene015514.t1 | AT1G62360 | 29.317 | 249 | 150 | 4 | 25 | 273 | 121 | 343 | 3.01e-22 | 95.9 |
Find 67 sgRNAs with CRISPR-Local
Find 260 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTATTTCAGGAGTGAGTT+TGG | 0.300536 | 5.4:-5657290 | MS.gene015514:intron |
| AGTCAAGAATTGAAGATGTA+AGG | 0.320951 | 5.4:-5656971 | MS.gene015514:CDS |
| TCATGCTGTTGAAGCTGTTA+TGG | 0.321045 | 5.4:-5659765 | MS.gene015514:CDS |
| GAACAATTGCAGATGGATTA+TGG | 0.322505 | 5.4:-5657229 | MS.gene015514:CDS |
| AGCTGAAGCAAATCAATAAT+TGG | 0.323659 | 5.4:-5656550 | MS.gene015514:CDS |
| ATGTAAGGGAGGAAATATTA+AGG | 0.375793 | 5.4:-5656956 | MS.gene015514:CDS |
| TTTATTTCAGGAGTGAGTTT+GGG | 0.389051 | 5.4:-5657289 | MS.gene015514:intron |
| ATGATGCAGGGTGGTGGTTA+CGG | 0.412986 | 5.4:-5660441 | MS.gene015514:CDS |
| AAGAAGAGCTGGAAAATTAC+CGG | 0.413561 | 5.4:-5656931 | MS.gene015514:CDS |
| TTAATCAAAGGAAAAGAAAC+TGG | 0.420427 | 5.4:-5656523 | MS.gene015514:CDS |
| GGTGGTTACGGTGGAGATGG+TGG | 0.421050 | 5.4:-5660429 | MS.gene015514:CDS |
| ATCAATGGTAACTGATCTAT+AGG | 0.425631 | 5.4:+5660312 | None:intergenic |
| TATACCTGTGAGGGCTTGTA+AGG | 0.438851 | 5.4:+5659721 | None:intergenic |
| CAACTTCAGTCTTAAAGAAC+TGG | 0.439479 | 5.4:-5656902 | MS.gene015514:CDS |
| GGTGGTGGTTACGGTGGAGA+TGG | 0.446536 | 5.4:-5660432 | MS.gene015514:CDS |
| ATATCTACTATTATATCTCT+TGG | 0.447639 | 5.4:+5656309 | None:intergenic |
| ACTCAAAATTGAGCTCAAAC+AGG | 0.454282 | 5.4:-5657101 | MS.gene015514:intron |
| TATCTCTTGGTGCATCTCAC+TGG | 0.459765 | 5.4:+5656322 | None:intergenic |
| GTCAAGAATTGAAGATGTAA+GGG | 0.466928 | 5.4:-5656970 | MS.gene015514:CDS |
| GTGAGTTTGGGAGAAGGAAG+TGG | 0.468312 | 5.4:-5657277 | MS.gene015514:CDS |
| TCAGGAGTGAGTTTGGGAGA+AGG | 0.470466 | 5.4:-5657283 | MS.gene015514:intron |
| GAAATGCAAGAACCAAGCTT+AGG | 0.481189 | 5.4:-5660465 | MS.gene015514:CDS |
| CTCTTGGTGCATCTCACTGG+TGG | 0.481516 | 5.4:+5656325 | None:intergenic |
| GCAAAACTTGTGGAGGAGAC+AGG | 0.501622 | 5.4:-5656578 | MS.gene015514:CDS |
| GATAACTGAGCATCAATCAA+TGG | 0.510534 | 5.4:+5660297 | None:intergenic |
| AAATGCAAGAACCAAGCTTA+GGG | 0.512228 | 5.4:-5660464 | MS.gene015514:CDS |
| TCTTGGTGCATCTCACTGGT+GGG | 0.521682 | 5.4:+5656326 | None:intergenic |
| TCAGATTCCGTAGGAAGTAA+TGG | 0.522855 | 5.4:+5657154 | None:intergenic |
| CCCTGCATCATCCCTAAGCT+TGG | 0.523912 | 5.4:+5660453 | None:intergenic |
| CTTGCGTTTCGACTTCAAAG+AGG | 0.527244 | 5.4:+5656478 | None:intergenic |
| ACCAAGCTTAGGGATGATGC+AGG | 0.529707 | 5.4:-5660454 | MS.gene015514:CDS |
| AATTAACATACAGTTGGGTA+AGG | 0.529902 | 5.4:+5656858 | None:intergenic |
| CTGGCACAGTAATTCTCAAT+CGG | 0.541137 | 5.4:-5656504 | MS.gene015514:CDS |
| GATAATCAGTCAAGTGGTGG+TGG | 0.544388 | 5.4:-5657202 | MS.gene015514:CDS |
| GATCATGACATGATGGGACT+TGG | 0.548603 | 5.4:-5657178 | MS.gene015514:CDS |
| ATATTAAGGAAAAGAAGAGC+TGG | 0.550111 | 5.4:-5656942 | MS.gene015514:CDS |
| ATAATTGGTTCATTAATCAA+AGG | 0.552236 | 5.4:-5656535 | MS.gene015514:CDS |
| ACTTGGTCCATTACTTCCTA+CGG | 0.552428 | 5.4:-5657161 | MS.gene015514:CDS |
| TGGTGGTGATCATGACATGA+TGG | 0.573965 | 5.4:-5657185 | MS.gene015514:CDS |
| GGAATCTGAGAGGTCACTCA+TGG | 0.575291 | 5.4:-5657140 | MS.gene015514:CDS |
| GGTTACGGTGGAGATGGTGG+CGG | 0.578578 | 5.4:-5660426 | MS.gene015514:CDS |
| AAGAATTGAAGATGTAAGGG+AGG | 0.579355 | 5.4:-5656967 | MS.gene015514:CDS |
| AGGAAGTGGTGCGACAATGT+CGG | 0.581478 | 5.4:-5657263 | MS.gene015514:CDS |
| TTAGGGATGATGCAGGGTGG+TGG | 0.582325 | 5.4:-5660447 | MS.gene015514:CDS |
| CGGTGAGAACAGACAACTGA+AGG | 0.590615 | 5.4:-5660406 | MS.gene015514:CDS |
| AAGACTGAAGTTGTGTCACC+CGG | 0.596174 | 5.4:+5656912 | None:intergenic |
| TGAAGATGAACAATTGCAGA+TGG | 0.612178 | 5.4:-5657236 | MS.gene015514:CDS |
| TCGAGTTGTTGACGATCATG+AGG | 0.612238 | 5.4:+5660219 | None:intergenic |
| AATACCTTACAAGCCCTCAC+AGG | 0.617490 | 5.4:-5659725 | MS.gene015514:intron |
| CAGTGTACATATACCTGTGA+GGG | 0.621411 | 5.4:+5659712 | None:intergenic |
| CTTTGAAGTCGAAACGCAAG+AGG | 0.621918 | 5.4:-5656475 | MS.gene015514:intron |
| AGAAGAGCTGGAAAATTACC+GGG | 0.627133 | 5.4:-5656930 | MS.gene015514:CDS |
| TGACAAAGCAAAACTTGTGG+AGG | 0.628394 | 5.4:-5656585 | MS.gene015514:CDS |
| CTTCAGTCTTAAAGAACTGG+TGG | 0.629856 | 5.4:-5656899 | MS.gene015514:CDS |
| GACAGAAGCTGTTCATACAA+AGG | 0.633295 | 5.4:+5660366 | None:intergenic |
| GGTCTAGATAATCAGTCAAG+TGG | 0.641451 | 5.4:-5657208 | MS.gene015514:CDS |
| ATGCAGGGTGGTGGTTACGG+TGG | 0.643110 | 5.4:-5660438 | MS.gene015514:CDS |
| GGTGGTGATCATGACATGAT+GGG | 0.646696 | 5.4:-5657184 | MS.gene015514:CDS |
| CTAGATAATCAGTCAAGTGG+TGG | 0.656919 | 5.4:-5657205 | MS.gene015514:CDS |
| AGTGACCTCTCAGATTCCGT+AGG | 0.660085 | 5.4:+5657145 | None:intergenic |
| TGAGAACAGACAACTGAAGG+CGG | 0.661001 | 5.4:-5660403 | MS.gene015514:CDS |
| AGATGACAAAGCAAAACTTG+TGG | 0.663448 | 5.4:-5656588 | MS.gene015514:CDS |
| GGTGGCAGCAACATGCAAAG+TGG | 0.673948 | 5.4:-5656881 | MS.gene015514:CDS |
| TACTTCCTACGGAATCTGAG+AGG | 0.681932 | 5.4:-5657150 | MS.gene015514:CDS |
| CCAAGCTTAGGGATGATGCA+GGG | 0.690210 | 5.4:-5660453 | MS.gene015514:CDS |
| GCAGTGTACATATACCTGTG+AGG | 0.695254 | 5.4:+5659711 | None:intergenic |
| AGCTTAGGGATGATGCAGGG+TGG | 0.716120 | 5.4:-5660450 | MS.gene015514:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTTAATTTTTTTTATTA+TGG | - | chr5.4:5657215-5657234 | MS.gene015514:CDS | 0.0% |
| !! | AAAAAAAAAAAAAAGAATAG+TGG | + | chr5.4:5659251-5659270 | None:intergenic | 10.0% |
| !! | AGTTTAAAAATAATAATAAC+AGG | - | chr5.4:5657943-5657962 | MS.gene015514:intron | 10.0% |
| !! | ATTAATTAATTAATGTAATC+CGG | - | chr5.4:5657596-5657615 | MS.gene015514:intron | 10.0% |
| !! | GATTTATTAAACAATAAAAT+GGG | + | chr5.4:5659006-5659025 | None:intergenic | 10.0% |
| !! | TATTGTTTAATAAATCATTT+GGG | - | chr5.4:5659010-5659029 | MS.gene015514:intron | 10.0% |
| !! | TGATTTATTAAACAATAAAA+TGG | + | chr5.4:5659007-5659026 | None:intergenic | 10.0% |
| !! | TTATTGTTTAATAAATCATT+TGG | - | chr5.4:5659009-5659028 | MS.gene015514:intron | 10.0% |
| !!! | AATTAATTTGTTATATATGT+TGG | - | chr5.4:5656918-5656937 | MS.gene015514:CDS | 10.0% |
| !! | AAAGTAAAAAAAAACTAAAC+TGG | - | chr5.4:5658499-5658518 | MS.gene015514:intron | 15.0% |
| !! | AAGAAAATAATAATTTCAGT+TGG | - | chr5.4:5658721-5658740 | MS.gene015514:intron | 15.0% |
| !! | AATTATTTGAAGATTGTTTA+AGG | + | chr5.4:5659147-5659166 | None:intergenic | 15.0% |
| !! | ATTTAACAGATTAATTAAAG+TGG | + | chr5.4:5656875-5656894 | None:intergenic | 15.0% |
| !! | CATTAGAAATAATTATACAT+GGG | + | chr5.4:5659050-5659069 | None:intergenic | 15.0% |
| !! | TCATTAGAAATAATTATACA+TGG | + | chr5.4:5659051-5659070 | None:intergenic | 15.0% |
| !! | TTACATGGAATAAATATATA+TGG | - | chr5.4:5659196-5659215 | MS.gene015514:intron | 15.0% |
| !!! | AATACCAATAATATGTTTTT+AGG | - | chr5.4:5657364-5657383 | MS.gene015514:intron | 15.0% |
| !!! | ATTATTTTCTTTTAAAGTGA+AGG | + | chr5.4:5658712-5658731 | None:intergenic | 15.0% |
| !!! | ATTTTAACCAATAAAATAAG+TGG | + | chr5.4:5657313-5657332 | None:intergenic | 15.0% |
| !!! | TTCCAAGATATAATTTTTTT+GGG | - | chr5.4:5658555-5658574 | MS.gene015514:intron | 15.0% |
| !! | AAAGTTAATTAACATACAGT+TGG | + | chr5.4:5659932-5659951 | None:intergenic | 20.0% |
| !! | AAGAACTTGTAAATAACTTT+AGG | + | chr5.4:5658184-5658203 | None:intergenic | 20.0% |
| !! | AAGTTAATTAACATACAGTT+GGG | + | chr5.4:5659931-5659950 | None:intergenic | 20.0% |
| !! | ACAATCTAAAAGATGTATTT+AGG | + | chr5.4:5658372-5658391 | None:intergenic | 20.0% |
| !! | ATAAGTTATGAAAAAACTTG+TGG | - | chr5.4:5657169-5657188 | MS.gene015514:CDS | 20.0% |
| !! | ATATTAATCTCTTATAGGTT+AGG | - | chr5.4:5657423-5657442 | MS.gene015514:intron | 20.0% |
| !! | ATATTTGCATAGAACAATTA+AGG | - | chr5.4:5658237-5658256 | MS.gene015514:intron | 20.0% |
| !! | ATGTATTTATTTGATCTTAC+CGG | - | chr5.4:5656644-5656663 | MS.gene015514:intron | 20.0% |
| !! | GCATAATCTCATTTATTAAT+TGG | + | chr5.4:5659771-5659790 | None:intergenic | 20.0% |
| !! | GTATACACAAATTAATTAGT+TGG | - | chr5.4:5657624-5657643 | MS.gene015514:intron | 20.0% |
| !! | GTTATGATTAATTAGTTACA+AGG | + | chr5.4:5659122-5659141 | None:intergenic | 20.0% |
| !! | TACATCTTAATCATACATAA+AGG | + | chr5.4:5658843-5658862 | None:intergenic | 20.0% |
| !! | TCACTATATTAATCTCTTAT+AGG | - | chr5.4:5657418-5657437 | MS.gene015514:intron | 20.0% |
| !! | TCCATAACAAGATTATAATT+CGG | + | chr5.4:5657756-5657775 | None:intergenic | 20.0% |
| !! | TTGATGTCAAAATTTGATAT+GGG | - | chr5.4:5659417-5659436 | MS.gene015514:intron | 20.0% |
| !! | TTTGATGTCAAAATTTGATA+TGG | - | chr5.4:5659416-5659435 | MS.gene015514:intron | 20.0% |
| !! | TTTGATTAATTATGATGTAC+TGG | - | chr5.4:5658617-5658636 | MS.gene015514:intron | 20.0% |
| !!! | AAATACATCTTTTAGATTGT+CGG | - | chr5.4:5658372-5658391 | MS.gene015514:intron | 20.0% |
| !!! | AGATTATGCATTAATTTGTA+GGG | - | chr5.4:5659782-5659801 | MS.gene015514:CDS | 20.0% |
| !!! | AGGAAAATTCTGAAATTAAT+AGG | + | chr5.4:5657846-5657865 | None:intergenic | 20.0% |
| !!! | ATAATTGGTTCATTAATCAA+AGG | - | chr5.4:5660246-5660265 | MS.gene015514:CDS | 20.0% |
| !!! | ATTATAATCTTGTTATGGAA+AGG | - | chr5.4:5657757-5657776 | MS.gene015514:intron | 20.0% |
| !!! | CAAATTTTGACATCAAATTA+TGG | + | chr5.4:5659413-5659432 | None:intergenic | 20.0% |
| !!! | CTTCCAAGATATAATTTTTT+TGG | - | chr5.4:5658554-5658573 | MS.gene015514:intron | 20.0% |
| !!! | TAATTCAAAAAACATTGACT+AGG | + | chr5.4:5658747-5658766 | None:intergenic | 20.0% |
| !!! | TAATTTGTTATATATGTTGG+TGG | - | chr5.4:5656921-5656940 | MS.gene015514:CDS | 20.0% |
| !!! | TATTCTTCTAAAGCTATTTT+TGG | - | chr5.4:5657523-5657542 | MS.gene015514:intron | 20.0% |
| !!! | TCCAAGATATAATTTTTTTG+GGG | - | chr5.4:5658556-5658575 | MS.gene015514:intron | 20.0% |
| !!! | TGTAGTATTGAATTTATTTC+AGG | - | chr5.4:5659480-5659499 | MS.gene015514:intron | 20.0% |
| !!! | TTTACTTCCACTTATTTTAT+TGG | - | chr5.4:5657303-5657322 | MS.gene015514:intron | 20.0% |
| ! | AAAGATAATCCCAATATGTT+AGG | - | chr5.4:5658024-5658043 | MS.gene015514:intron | 25.0% |
| ! | AACTAATCTGGTTAATATCA+TGG | - | chr5.4:5660159-5660178 | MS.gene015514:intron | 25.0% |
| ! | AAGAACTTTATGAACTTAAG+TGG | + | chr5.4:5657119-5657138 | None:intergenic | 25.0% |
| ! | ACCGAATTATAATCTTGTTA+TGG | - | chr5.4:5657752-5657771 | MS.gene015514:intron | 25.0% |
| ! | AGTGCCTAAAAACATATTAT+TGG | + | chr5.4:5657371-5657390 | None:intergenic | 25.0% |
| ! | ATAGACTAATTCTTCTAATC+GGG | + | chr5.4:5657900-5657919 | None:intergenic | 25.0% |
| ! | CATAGACTAATTCTTCTAAT+CGG | + | chr5.4:5657901-5657920 | None:intergenic | 25.0% |
| ! | CTTAATCATACATAAAGGAA+AGG | + | chr5.4:5658838-5658857 | None:intergenic | 25.0% |
| ! | GCTAATTTAAATAAGCTGAT+TGG | + | chr5.4:5657797-5657816 | None:intergenic | 25.0% |
| ! | TAATAATAACAGGAGACATT+TGG | - | chr5.4:5657953-5657972 | MS.gene015514:intron | 25.0% |
| ! | TAATTTGAAGATGTCCAAAA+TGG | + | chr5.4:5658686-5658705 | None:intergenic | 25.0% |
| ! | TGATTAATTAGTTACAAGGA+CGG | + | chr5.4:5659118-5659137 | None:intergenic | 25.0% |
| ! | TTAATCAAAGGAAAAGAAAC+TGG | - | chr5.4:5660258-5660277 | MS.gene015514:CDS | 25.0% |
| !! | ACACCAAAAAAAATGAGTTT+TGG | + | chr5.4:5656762-5656781 | None:intergenic | 25.0% |
| !! | ATATATACCCTTTTACTGTT+AGG | - | chr5.4:5658092-5658111 | MS.gene015514:intron | 25.0% |
| !! | ATTTCAGTTCAATTTTGTCT+AGG | - | chr5.4:5659332-5659351 | MS.gene015514:intron | 25.0% |
| !! | TAATTTGTGTATACTCTTTC+CGG | + | chr5.4:5657618-5657637 | None:intergenic | 25.0% |
| !! | TTTCAGAATTTTCCTACATA+TGG | - | chr5.4:5657851-5657870 | MS.gene015514:intron | 25.0% |
| !!! | AATTTCCCTTAGTTTTGTTT+CGG | - | chr5.4:5659385-5659404 | MS.gene015514:intron | 25.0% |
| !!! | CTTCCAAAACTCATTTTTTT+TGG | - | chr5.4:5656756-5656775 | MS.gene015514:intron | 25.0% |
| !!! | CTTTTTAAAAAAAGTTGCGT+TGG | - | chr5.4:5658144-5658163 | MS.gene015514:intron | 25.0% |
| !!! | GAGATTATGCATTAATTTGT+AGG | - | chr5.4:5659781-5659800 | MS.gene015514:CDS | 25.0% |
| !!! | GTAAGGTATTTTCAATATCA+CGG | + | chr5.4:5657046-5657065 | None:intergenic | 25.0% |
| !!! | TTTTTGGTGTGATTAATTTG+AGG | - | chr5.4:5656772-5656791 | MS.gene015514:intron | 25.0% |
| AATTAACATACAGTTGGGTA+AGG | + | chr5.4:5659926-5659945 | None:intergenic | 30.0% | |
| ACAAGATTATAATTCGGTTG+TGG | + | chr5.4:5657750-5657769 | None:intergenic | 30.0% | |
| ACTGTTTATCCAAACAACTT+CGG | - | chr5.4:5657268-5657287 | MS.gene015514:CDS | 30.0% | |
| AGCTGAAGCAAATCAATAAT+TGG | - | chr5.4:5660231-5660250 | MS.gene015514:CDS | 30.0% | |
| AGTCAAGAATTGAAGATGTA+AGG | - | chr5.4:5659810-5659829 | MS.gene015514:CDS | 30.0% | |
| ATATTAAGGAAAAGAAGAGC+TGG | - | chr5.4:5659839-5659858 | MS.gene015514:intron | 30.0% | |
| ATCAATGGTAACTGATCTAT+AGG | + | chr5.4:5656472-5656491 | None:intergenic | 30.0% | |
| ATGTAAGGGAGGAAATATTA+AGG | - | chr5.4:5659825-5659844 | MS.gene015514:CDS | 30.0% | |
| ATTATAACACCGAAGTTGTT+TGG | + | chr5.4:5657280-5657299 | None:intergenic | 30.0% | |
| ATTCTTTGTAAATCAGTGTC+GGG | + | chr5.4:5660060-5660079 | None:intergenic | 30.0% | |
| ATTTATTTCAGGAGTGAGTT+TGG | - | chr5.4:5659491-5659510 | MS.gene015514:intron | 30.0% | |
| CAAACTAAACTCTTCCAAAT+TGG | + | chr5.4:5657661-5657680 | None:intergenic | 30.0% | |
| CAAGATTATAATTCGGTTGT+GGG | + | chr5.4:5657749-5657768 | None:intergenic | 30.0% | |
| CAATTTGGAAGAGTTTAGTT+TGG | - | chr5.4:5657659-5657678 | MS.gene015514:intron | 30.0% | |
| CAGTTACACTCATATTTACA+TGG | - | chr5.4:5659181-5659200 | MS.gene015514:intron | 30.0% | |
| CGGTGAATTTAACATAATCA+CGG | - | chr5.4:5658392-5658411 | MS.gene015514:intron | 30.0% | |
| CTTTATGAACTTAAGTGGTA+CGG | + | chr5.4:5657114-5657133 | None:intergenic | 30.0% | |
| GAATGAATCTTGTGTGTATT+TGG | + | chr5.4:5660083-5660102 | None:intergenic | 30.0% | |
| GATTCTTTGTAAATCAGTGT+CGG | + | chr5.4:5660061-5660080 | None:intergenic | 30.0% | |
| GCCCCAAAAAAATTATATCT+TGG | + | chr5.4:5658560-5658579 | None:intergenic | 30.0% | |
| GTCAAGAATTGAAGATGTAA+GGG | - | chr5.4:5659811-5659830 | MS.gene015514:CDS | 30.0% | |
| GTTTAACATGCAGATACATA+TGG | + | chr5.4:5659447-5659466 | None:intergenic | 30.0% | |
| GTTTGTAAAAACACGAATAG+TGG | + | chr5.4:5659288-5659307 | None:intergenic | 30.0% | |
| TAGTAAAATTCATGGCTTTC+TGG | - | chr5.4:5656797-5656816 | MS.gene015514:intron | 30.0% | |
| TCTAATGAGAAATTGCAAAG+TGG | - | chr5.4:5659063-5659082 | MS.gene015514:intron | 30.0% | |
| TTGAGGCTTAGTAAAATTCA+TGG | - | chr5.4:5656789-5656808 | MS.gene015514:intron | 30.0% | |
| TTTATTTCAGGAGTGAGTTT+GGG | - | chr5.4:5659492-5659511 | MS.gene015514:intron | 30.0% | |
| TTTGTACTATGAGAAATGCT+AGG | - | chr5.4:5658467-5658486 | MS.gene015514:intron | 30.0% | |
| ! | AATTTTATCTTCTCCGAAAC+TGG | + | chr5.4:5660008-5660027 | None:intergenic | 30.0% |
| ! | TGACATTTAACTGTCCATTT+TGG | - | chr5.4:5658669-5658688 | MS.gene015514:intron | 30.0% |
| ! | TGTACACTAGTACGATTTTA+AGG | + | chr5.4:5658211-5658230 | None:intergenic | 30.0% |
| ! | TTTTGTCTAGGTAACATTCT+TGG | - | chr5.4:5659344-5659363 | MS.gene015514:intron | 30.0% |
| !! | TATATATGTTGGTGGTTGTT+TGG | - | chr5.4:5656929-5656948 | MS.gene015514:CDS | 30.0% |
| !!! | AAGCTATTTTTGGTGGATTT+TGG | - | chr5.4:5657533-5657552 | MS.gene015514:intron | 30.0% |
| !!! | AGCTTACAGTTTTGATTTTG+TGG | - | chr5.4:5658065-5658084 | MS.gene015514:intron | 30.0% |
| !!! | TCTTCTAAAGCTATTTTTGG+TGG | - | chr5.4:5657526-5657545 | MS.gene015514:intron | 30.0% |
| AAGAAGAGCTGGAAAATTAC+CGG | - | chr5.4:5659850-5659869 | MS.gene015514:intron | 35.0% | |
| AAGAATTGAAGATGTAAGGG+AGG | - | chr5.4:5659814-5659833 | MS.gene015514:CDS | 35.0% | |
| AAGCATTACCTTGGTTGAAT+AGG | - | chr5.4:5658264-5658283 | MS.gene015514:intron | 35.0% | |
| AATAACAGGAGACATTTGGA+AGG | - | chr5.4:5657957-5657976 | MS.gene015514:intron | 35.0% | |
| AATGAAAAGCTGTTCATGTC+TGG | - | chr5.4:5658971-5658990 | MS.gene015514:intron | 35.0% | |
| ACTAATTCTTCTAATCGGGT+AGG | + | chr5.4:5657896-5657915 | None:intergenic | 35.0% | |
| ACTCAAAATTGAGCTCAAAC+AGG | - | chr5.4:5659680-5659699 | MS.gene015514:intron | 35.0% | |
| AGAAATTACATGCAGAAGGA+AGG | + | chr5.4:5659955-5659974 | None:intergenic | 35.0% | |
| AGATGACAAAGCAAAACTTG+TGG | - | chr5.4:5660193-5660212 | MS.gene015514:intron | 35.0% | |
| AGCATTACCTTGGTTGAATA+GGG | - | chr5.4:5658265-5658284 | MS.gene015514:intron | 35.0% | |
| AGTGTTCTACTTCCATATGT+AGG | + | chr5.4:5657866-5657885 | None:intergenic | 35.0% | |
| ATAACAGGAGACATTTGGAA+GGG | - | chr5.4:5657958-5657977 | MS.gene015514:intron | 35.0% | |
| ATCCACATCCACTAACATAA+GGG | - | chr5.4:5658903-5658922 | MS.gene015514:intron | 35.0% | |
| ATGGAACCGAAACAAAACTA+AGG | + | chr5.4:5659394-5659413 | None:intergenic | 35.0% | |
| ATGTCCATCATTGATGTTGT+TGG | - | chr5.4:5658797-5658816 | MS.gene015514:intron | 35.0% | |
| ATGTGTCAACAAAACTTGAC+CGG | + | chr5.4:5656666-5656685 | None:intergenic | 35.0% | |
| CAACTTCAGTCTTAAAGAAC+TGG | - | chr5.4:5659879-5659898 | MS.gene015514:intron | 35.0% | |
| CTAGTAGCCTAACAGTAAAA+GGG | + | chr5.4:5658102-5658121 | None:intergenic | 35.0% | |
| GACAGAAAGCCTAACATATT+GGG | + | chr5.4:5658036-5658055 | None:intergenic | 35.0% | |
| GAGAGCAATGTAGTTACATA+AGG | + | chr5.4:5658932-5658951 | None:intergenic | 35.0% | |
| GATAACTGAGCATCAATCAA+TGG | + | chr5.4:5656487-5656506 | None:intergenic | 35.0% | |
| GATCAGAAATTACATGCAGA+AGG | + | chr5.4:5659959-5659978 | None:intergenic | 35.0% | |
| GTATCCATGGCTATTTAAGT+AGG | - | chr5.4:5658639-5658658 | MS.gene015514:intron | 35.0% | |
| TAAGGAATCAAGCATTACCT+TGG | - | chr5.4:5658255-5658274 | MS.gene015514:intron | 35.0% | |
| TATCCACATCCACTAACATA+AGG | - | chr5.4:5658902-5658921 | MS.gene015514:intron | 35.0% | |
| TCATCCTACTTAAATAGCCA+TGG | + | chr5.4:5658646-5658665 | None:intergenic | 35.0% | |
| TCCATCAAAATCCTCTTTGT+TGG | + | chr5.4:5656834-5656853 | None:intergenic | 35.0% | |
| TGAAGATGAACAATTGCAGA+TGG | - | chr5.4:5659545-5659564 | MS.gene015514:intron | 35.0% | |
| TGACAGAAAGCCTAACATAT+TGG | + | chr5.4:5658037-5658056 | None:intergenic | 35.0% | |
| TGGAACCGAAACAAAACTAA+GGG | + | chr5.4:5659393-5659412 | None:intergenic | 35.0% | |
| TGGTTACATAGCAACCAATT+TGG | - | chr5.4:5657644-5657663 | MS.gene015514:intron | 35.0% | |
| TTGGCTAATCTGAAGAAAGT+GGG | - | chr5.4:5657552-5657571 | MS.gene015514:intron | 35.0% | |
| TTTGGCTAATCTGAAGAAAG+TGG | - | chr5.4:5657551-5657570 | MS.gene015514:intron | 35.0% | |
| ! | CGTATGTTTAGTTCCAGTTT+CGG | - | chr5.4:5659992-5660011 | MS.gene015514:intron | 35.0% |
| ! | CTTTATTTGTGCCAACAAAG+AGG | - | chr5.4:5656820-5656839 | MS.gene015514:intron | 35.0% |
| ! | CTTTTACTGTTAGGCTACTA+GGG | - | chr5.4:5658101-5658120 | MS.gene015514:intron | 35.0% |
| ! | GACATGAACAGCTTTTCATT+TGG | + | chr5.4:5658971-5658990 | None:intergenic | 35.0% |
| ! | GTTAATATCATGGTTTGTGC+AGG | - | chr5.4:5660169-5660188 | MS.gene015514:intron | 35.0% |
| ! | GTTAGGCATATGTTGTTGTT+TGG | - | chr5.4:5657440-5657459 | MS.gene015514:intron | 35.0% |
| ! | TCATTTGGAAGTTTGAGACA+TGG | + | chr5.4:5658956-5658975 | None:intergenic | 35.0% |
| ! | TTATGATGTACTGGTATCCA+TGG | - | chr5.4:5658626-5658645 | MS.gene015514:intron | 35.0% |
| ! | TTTTACTGTTAGGCTACTAG+GGG | - | chr5.4:5658102-5658121 | MS.gene015514:intron | 35.0% |
| ! | TTTTGTTCCTAATTACCAGC+TGG | - | chr5.4:5660360-5660379 | MS.gene015514:CDS | 35.0% |
| !! | ACAAAGAGGATTTTGATGGA+TGG | - | chr5.4:5656834-5656853 | MS.gene015514:intron | 35.0% |
| !! | ATGTTGTTGTTTGGTTTGGT+GGG | - | chr5.4:5657449-5657468 | MS.gene015514:intron | 35.0% |
| !! | CAAAGAGGATTTTGATGGAT+GGG | - | chr5.4:5656835-5656854 | MS.gene015514:intron | 35.0% |
| !! | GAACAATTGCAGATGGATTA+TGG | - | chr5.4:5659552-5659571 | MS.gene015514:intron | 35.0% |
| !! | GAAGTTGATGCTATAAGGAA+TGG | + | chr5.4:5658538-5658557 | None:intergenic | 35.0% |
| !! | GCATATGTTGTTGTTTGGTT+TGG | - | chr5.4:5657445-5657464 | MS.gene015514:intron | 35.0% |
| !! | TAGCTGGAGTGTGTTTTTAA+GGG | - | chr5.4:5658310-5658329 | MS.gene015514:intron | 35.0% |
| !! | TATGTTGTTGTTTGGTTTGG+TGG | - | chr5.4:5657448-5657467 | MS.gene015514:intron | 35.0% |
| !! | TCTTGGAAGTTGATGCTATA+AGG | + | chr5.4:5658543-5658562 | None:intergenic | 35.0% |
| !! | TGGAAGAGTTTAGTTTGGTA+AGG | - | chr5.4:5657664-5657683 | MS.gene015514:intron | 35.0% |
| !!! | AATTTTTTTGGGGCAATGCT+AGG | - | chr5.4:5658566-5658585 | MS.gene015514:intron | 35.0% |
| AAGCTTATTACGTGTGTCGT+TGG | + | chr5.4:5660131-5660150 | None:intergenic | 40.0% | |
| ACTTGGTCCATTACTTCCTA+CGG | - | chr5.4:5659620-5659639 | MS.gene015514:intron | 40.0% | |
| AGAAGAGCTGGAAAATTACC+GGG | - | chr5.4:5659851-5659870 | MS.gene015514:intron | 40.0% | |
| CAGTGTACATATACCTGTGA+GGG | + | chr5.4:5657072-5657091 | None:intergenic | 40.0% | |
| CCTAGTAGCCTAACAGTAAA+AGG | + | chr5.4:5658103-5658122 | None:intergenic | 40.0% | |
| CTAGATAATCAGTCAAGTGG+TGG | - | chr5.4:5659576-5659595 | MS.gene015514:intron | 40.0% | |
| CTGGCACAGTAATTCTCAAT+CGG | - | chr5.4:5660277-5660296 | MS.gene015514:CDS | 40.0% | |
| CTTAAAAACACACTCCAGCT+AGG | + | chr5.4:5658311-5658330 | None:intergenic | 40.0% | |
| CTTCAGTCTTAAAGAACTGG+TGG | - | chr5.4:5659882-5659901 | MS.gene015514:intron | 40.0% | |
| GACAGAAGCTGTTCATACAA+AGG | + | chr5.4:5656418-5656437 | None:intergenic | 40.0% | |
| GATTATAATTCGGTTGTGGG+TGG | + | chr5.4:5657746-5657765 | None:intergenic | 40.0% | |
| GCACACAAACAAGAGATATC+AGG | + | chr5.4:5657996-5658015 | None:intergenic | 40.0% | |
| GGATGTGGATACATGATGAT+GGG | + | chr5.4:5658893-5658912 | None:intergenic | 40.0% | |
| GGTCTAGATAATCAGTCAAG+TGG | - | chr5.4:5659573-5659592 | MS.gene015514:intron | 40.0% | |
| GGTTTCATATCATGGTTGGA+GGG | + | chr5.4:5657709-5657728 | None:intergenic | 40.0% | |
| GTTGCCAACAACATCAATGA+TGG | + | chr5.4:5658804-5658823 | None:intergenic | 40.0% | |
| TATAGTTGTGTGTTACCAGC+TGG | + | chr5.4:5660378-5660397 | None:intergenic | 40.0% | |
| TATGAACTTAAGTGGTACGG+AGG | + | chr5.4:5657111-5657130 | None:intergenic | 40.0% | |
| TCAGATTCCGTAGGAAGTAA+TGG | + | chr5.4:5659630-5659649 | None:intergenic | 40.0% | |
| TCATGCTGTTGAAGCTGTTA+TGG | - | chr5.4:5657016-5657035 | MS.gene015514:intron | 40.0% | |
| TCCACATCCACTAACATAAG+GGG | - | chr5.4:5658904-5658923 | MS.gene015514:intron | 40.0% | |
| TCGGGCTCATTCAAAACTTT+AGG | + | chr5.4:5660042-5660061 | None:intergenic | 40.0% | |
| TGACAAAGCAAAACTTGTGG+AGG | - | chr5.4:5660196-5660215 | MS.gene015514:intron | 40.0% | |
| TGCAAAGTGGAGCTTCAATA+GGG | - | chr5.4:5659076-5659095 | MS.gene015514:intron | 40.0% | |
| TGGATGTGGATACATGATGA+TGG | + | chr5.4:5658894-5658913 | None:intergenic | 40.0% | |
| TGGCTAATCTGAAGAAAGTG+GGG | - | chr5.4:5657553-5657572 | MS.gene015514:intron | 40.0% | |
| TGTGTTACCAGCTGGTAATT+AGG | + | chr5.4:5660370-5660389 | None:intergenic | 40.0% | |
| TTACCTTGGTTGAATAGGGA+TGG | - | chr5.4:5658269-5658288 | MS.gene015514:intron | 40.0% | |
| TTGCAAAGTGGAGCTTCAAT+AGG | - | chr5.4:5659075-5659094 | MS.gene015514:intron | 40.0% | |
| TTGTGGGTGGTAATAGTTGT+TGG | + | chr5.4:5657733-5657752 | None:intergenic | 40.0% | |
| TTGTTGGCGGTTTCATATCA+TGG | + | chr5.4:5657717-5657736 | None:intergenic | 40.0% | |
| ! | CCTTTTACTGTTAGGCTACT+AGG | - | chr5.4:5658100-5658119 | MS.gene015514:intron | 40.0% |
| ! | GATGTGGATACATGATGATG+GGG | + | chr5.4:5658892-5658911 | None:intergenic | 40.0% |
| ! | GCCAACAAAGAGGATTTTGA+TGG | - | chr5.4:5656830-5656849 | MS.gene015514:intron | 40.0% |
| ! | TATCTCTTGTTTGTGTGCTG+TGG | - | chr5.4:5657998-5658017 | MS.gene015514:intron | 40.0% |
| !! | CTAGCTGGAGTGTGTTTTTA+AGG | - | chr5.4:5658309-5658328 | MS.gene015514:intron | 40.0% |
| !! | GATGATGGGGTCTCTAAATT+GGG | + | chr5.4:5658879-5658898 | None:intergenic | 40.0% |
| !! | GGTTTGGTGGGTTAGATATT+TGG | - | chr5.4:5657461-5657480 | MS.gene015514:intron | 40.0% |
| !! | TGATGATGGGGTCTCTAAAT+TGG | + | chr5.4:5658880-5658899 | None:intergenic | 40.0% |
| AAGACTGAAGTTGTGTCACC+CGG | + | chr5.4:5659872-5659891 | None:intergenic | 45.0% | |
| AATACCTTACAAGCCCTCAC+AGG | - | chr5.4:5657056-5657075 | MS.gene015514:intron | 45.0% | |
| CCACATCCACTAACATAAGG+GGG | - | chr5.4:5658905-5658924 | MS.gene015514:intron | 45.0% | |
| CGGTTTCATATCATGGTTGG+AGG | + | chr5.4:5657710-5657729 | None:intergenic | 45.0% | |
| CTAATCTGAAGAAAGTGGGG+GGG | - | chr5.4:5657556-5657575 | MS.gene015514:intron | 45.0% | |
| GATAATCAGTCAAGTGGTGG+TGG | - | chr5.4:5659579-5659598 | MS.gene015514:intron | 45.0% | |
| GCAGTGTACATATACCTGTG+AGG | + | chr5.4:5657073-5657092 | None:intergenic | 45.0% | |
| GCTAATCTGAAGAAAGTGGG+GGG | - | chr5.4:5657555-5657574 | MS.gene015514:intron | 45.0% | |
| GGCTAATCTGAAGAAAGTGG+GGG | - | chr5.4:5657554-5657573 | MS.gene015514:intron | 45.0% | |
| GGTGGTGATCATGACATGAT+GGG | - | chr5.4:5659597-5659616 | MS.gene015514:intron | 45.0% | |
| GTGAGTGAGTATTACGTACG+AGG | + | chr5.4:5656594-5656613 | None:intergenic | 45.0% | |
| TAAGGTCCCCCTTATGTTAG+TGG | + | chr5.4:5658914-5658933 | None:intergenic | 45.0% | |
| TACTTCCTACGGAATCTGAG+AGG | - | chr5.4:5659631-5659650 | MS.gene015514:intron | 45.0% | |
| TATACCTGTGAGGGCTTGTA+AGG | + | chr5.4:5657063-5657082 | None:intergenic | 45.0% | |
| TGAGAACAGACAACTGAAGG+CGG | - | chr5.4:5656378-5656397 | MS.gene015514:intron | 45.0% | |
| TGGCGGTTTCATATCATGGT+TGG | + | chr5.4:5657713-5657732 | None:intergenic | 45.0% | |
| TGGGTGGTAATAGTTGTTGG+CGG | + | chr5.4:5657730-5657749 | None:intergenic | 45.0% | |
| ! | AGACATTTGGAAGGGTTGGT+TGG | - | chr5.4:5657966-5657985 | MS.gene015514:intron | 45.0% |
| ! | GATCATGACATGATGGGACT+TGG | - | chr5.4:5659603-5659622 | MS.gene015514:intron | 45.0% |
| ! | GCTTGTGTCGCTAACTAATC+TGG | - | chr5.4:5660147-5660166 | MS.gene015514:intron | 45.0% |
| ! | TATCTCTTGGTGCATCTCAC+TGG | + | chr5.4:5660462-5660481 | None:intergenic | 45.0% |
| ! | TCGAGTTGTTGACGATCATG+AGG | + | chr5.4:5656565-5656584 | None:intergenic | 45.0% |
| ! | TGGTGGTGATCATGACATGA+TGG | - | chr5.4:5659596-5659615 | MS.gene015514:intron | 45.0% |
| !! | GACATTTGGAAGGGTTGGTT+GGG | - | chr5.4:5657967-5657986 | MS.gene015514:intron | 45.0% |
| !!! | CAGCTGTGTTTTAACCTAGC+TGG | - | chr5.4:5658294-5658313 | MS.gene015514:intron | 45.0% |
| !! | ATTACATTAATTAATTAATT+AGG | + | chr5.4:5657595-5657614 | None:intergenic | 5.0% |
| !!! | AATTAAACAAATATTTTATT+TGG | + | chr5.4:5657395-5657414 | None:intergenic | 5.0% |
| ACCAAGCTTAGGGATGATGC+AGG | - | chr5.4:5656327-5656346 | MS.gene015514:CDS | 50.0% | |
| AGGAAGTGGTGCGACAATGT+CGG | - | chr5.4:5659518-5659537 | MS.gene015514:intron | 50.0% | |
| AGTGACCTCTCAGATTCCGT+AGG | + | chr5.4:5659639-5659658 | None:intergenic | 50.0% | |
| AGTGGAGCTTCAATAGGGAC+TGG | - | chr5.4:5659081-5659100 | MS.gene015514:intron | 50.0% | |
| CAGGAGACATTTGGAAGGGT+TGG | - | chr5.4:5657962-5657981 | MS.gene015514:intron | 50.0% | |
| CCAAGCTTAGGGATGATGCA+GGG | - | chr5.4:5656328-5656347 | MS.gene015514:CDS | 50.0% | |
| CGGTGAGAACAGACAACTGA+AGG | - | chr5.4:5656375-5656394 | MS.gene015514:intron | 50.0% | |
| GAACTTAAGTGGTACGGAGG+AGG | + | chr5.4:5657108-5657127 | None:intergenic | 50.0% | |
| GCAAAACTTGTGGAGGAGAC+AGG | - | chr5.4:5660203-5660222 | MS.gene015514:intron | 50.0% | |
| GCACCATCCCTATTCAACCA+AGG | + | chr5.4:5658275-5658294 | None:intergenic | 50.0% | |
| GGAATCTGAGAGGTCACTCA+TGG | - | chr5.4:5659641-5659660 | MS.gene015514:intron | 50.0% | |
| GGTACGGAGGAGGAGATATA+TGG | + | chr5.4:5657098-5657117 | None:intergenic | 50.0% | |
| GTGAGTTTGGGAGAAGGAAG+TGG | - | chr5.4:5659504-5659523 | MS.gene015514:intron | 50.0% | |
| TCAGGAGTGAGTTTGGGAGA+AGG | - | chr5.4:5659498-5659517 | MS.gene015514:intron | 50.0% | |
| ! | ATGATGCAGGGTGGTGGTTA+CGG | - | chr5.4:5656340-5656359 | MS.gene015514:CDS | 50.0% |
| ! | CCCCCTTATGTTAGTGGATG+TGG | + | chr5.4:5658908-5658927 | None:intergenic | 50.0% |
| ! | TCTTGGTGCATCTCACTGGT+GGG | + | chr5.4:5660458-5660477 | None:intergenic | 50.0% |
| !! | TGTTGGTGGTTGTTTGGTGC+AGG | - | chr5.4:5656935-5656954 | MS.gene015514:CDS | 50.0% |
| AGCTTAGGGATGATGCAGGG+TGG | - | chr5.4:5656331-5656350 | MS.gene015514:CDS | 55.0% | |
| CCCTGCATCATCCCTAAGCT+TGG | + | chr5.4:5656331-5656350 | None:intergenic | 55.0% | |
| GGTGGCAGCAACATGCAAAG+TGG | - | chr5.4:5659900-5659919 | MS.gene015514:intron | 55.0% | |
| TTAGGGATGATGCAGGGTGG+TGG | - | chr5.4:5656334-5656353 | MS.gene015514:CDS | 55.0% | |
| ! | CTCTTGGTGCATCTCACTGG+TGG | + | chr5.4:5660459-5660478 | None:intergenic | 55.0% |
| CTGAAGAAAGTGGGGGGGTG+TGG | - | chr5.4:5657561-5657580 | MS.gene015514:intron | 60.0% | |
| GGTGGTTACGGTGGAGATGG+TGG | - | chr5.4:5656352-5656371 | MS.gene015514:intron | 60.0% | |
| ! | AGAAAGTGGGGGGGTGTGGT+AGG | - | chr5.4:5657565-5657584 | MS.gene015514:intron | 60.0% |
| ! | ATGCAGGGTGGTGGTTACGG+TGG | - | chr5.4:5656343-5656362 | MS.gene015514:intron | 60.0% |
| ! | GAAAGTGGGGGGGTGTGGTA+GGG | - | chr5.4:5657566-5657585 | MS.gene015514:intron | 60.0% |
| ! | GGTGGTGGTTACGGTGGAGA+TGG | - | chr5.4:5656349-5656368 | MS.gene015514:intron | 60.0% |
| ! | GGTTACGGTGGAGATGGTGG+CGG | - | chr5.4:5656355-5656374 | MS.gene015514:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 5656319 | 5660484 | 5656319 | ID=MS.gene015514 |
| chr5.4 | mRNA | 5656319 | 5660484 | 5656319 | ID=MS.gene015514.t1;Parent=MS.gene015514 |
| chr5.4 | exon | 5660209 | 5660484 | 5660209 | ID=MS.gene015514.t1.exon1;Parent=MS.gene015514.t1 |
| chr5.4 | CDS | 5660209 | 5660484 | 5660209 | ID=cds.MS.gene015514.t1;Parent=MS.gene015514.t1 |
| chr5.4 | exon | 5659726 | 5659846 | 5659726 | ID=MS.gene015514.t1.exon2;Parent=MS.gene015514.t1 |
| chr5.4 | CDS | 5659726 | 5659846 | 5659726 | ID=cds.MS.gene015514.t1;Parent=MS.gene015514.t1 |
| chr5.4 | exon | 5657102 | 5657301 | 5657102 | ID=MS.gene015514.t1.exon3;Parent=MS.gene015514.t1 |
| chr5.4 | CDS | 5657102 | 5657301 | 5657102 | ID=cds.MS.gene015514.t1;Parent=MS.gene015514.t1 |
| chr5.4 | exon | 5656869 | 5657000 | 5656869 | ID=MS.gene015514.t1.exon4;Parent=MS.gene015514.t1 |
| chr5.4 | CDS | 5656869 | 5657000 | 5656869 | ID=cds.MS.gene015514.t1;Parent=MS.gene015514.t1 |
| chr5.4 | exon | 5656476 | 5656612 | 5656476 | ID=MS.gene015514.t1.exon5;Parent=MS.gene015514.t1 |
| chr5.4 | CDS | 5656476 | 5656612 | 5656476 | ID=cds.MS.gene015514.t1;Parent=MS.gene015514.t1 |
| chr5.4 | exon | 5656319 | 5656361 | 5656319 | ID=MS.gene015514.t1.exon6;Parent=MS.gene015514.t1 |
| chr5.4 | CDS | 5656319 | 5656361 | 5656319 | ID=cds.MS.gene015514.t1;Parent=MS.gene015514.t1 |
| Gene Sequence |
| Protein sequence |
