AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene015553

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene015553.t1 MTR_5g010650 88.889 477 52 1 1 477 1 476 0.0 856
MS.gene015553.t1 MTR_3g110028 60.127 158 60 1 53 210 31 185 1.17e-61 216
MS.gene015553.t1 MTR_7g061330 60.625 160 60 1 51 210 57 213 1.54e-61 210
MS.gene015553.t1 MTR_7g461410 60.625 160 60 1 51 210 57 213 1.54e-61 210
MS.gene015553.t1 MTR_7g061330 60.625 160 60 1 51 210 21 177 2.16e-61 209
MS.gene015553.t1 MTR_1g026870 61.392 158 58 1 53 210 31 185 2.84e-60 213
MS.gene015553.t1 MTR_3g463400 44.516 155 73 2 58 212 94 235 3.00e-37 142
MS.gene015553.t1 MTR_3g463400 36.735 98 58 2 56 153 134 227 2.66e-11 65.9
MS.gene015553.t1 MTR_7g037260 52.212 113 54 0 107 219 142 254 1.25e-36 138
MS.gene015553.t1 MTR_7g037260 37.755 98 57 2 56 153 146 239 1.29e-11 66.2
MS.gene015553.t1 MTR_4g105660 54.545 110 50 0 108 217 178 287 2.55e-36 139
MS.gene015553.t1 MTR_4g105660 37.113 97 57 2 56 152 181 273 3.07e-11 65.5
MS.gene015553.t1 MTR_3g077650 52.252 111 53 0 107 217 178 288 2.58e-36 139
MS.gene015553.t1 MTR_3g077650 36.111 108 65 2 46 153 172 275 3.67e-13 71.6
MS.gene015553.t1 MTR_5g070020 54.286 105 48 0 108 212 120 224 3.10e-36 137
MS.gene015553.t1 MTR_5g070020 37.615 109 63 3 44 152 112 215 2.48e-11 65.5
MS.gene015553.t1 MTR_4g088015 47.458 118 62 0 102 219 213 330 2.11e-34 134
MS.gene015553.t1 MTR_4g088015 38.144 97 56 2 56 152 222 314 2.74e-11 65.9
MS.gene015553.t1 MTR_7g451170 52.294 109 52 0 109 217 190 298 2.35e-34 133
MS.gene015553.t1 MTR_5g049190 52.830 106 50 0 107 212 16 121 3.72e-34 129
MS.gene015553.t1 MTR_4g094982 44.056 143 80 0 107 249 2 144 9.79e-34 128
MS.gene015553.t1 MTR_5g016510 53.271 107 50 0 107 213 2 108 3.68e-33 128
MS.gene015553.t1 MTR_7g035350 52.679 112 52 1 107 217 222 333 4.22e-33 130
MS.gene015553.t1 MTR_7g037130 50.862 116 52 1 91 206 131 241 6.09e-33 128
MS.gene015553.t1 MTR_4g019370 51.961 102 49 0 109 210 37 138 2.21e-32 127
MS.gene015553.t1 MTR_5g082910 51.456 103 50 0 105 207 14 116 1.77e-31 122
MS.gene015553.t1 MTR_1g008970 47.154 123 46 1 85 207 85 188 6.54e-31 120
MS.gene015553.t1 MTR_1g057980 54.000 100 46 0 107 206 77 176 2.12e-30 120
MS.gene015553.t1 MTR_1g057980 33.333 99 62 2 54 152 79 173 5.72e-11 63.9
MS.gene015553.t1 MTR_6g015455 50.467 107 53 0 107 213 2 108 1.51e-29 123
MS.gene015553.t1 MTR_3g101290 46.729 107 55 2 107 212 34 139 4.21e-28 111
MS.gene015553.t1 MTR_7g450950 47.321 112 56 1 109 217 156 267 1.00e-27 113
MS.gene015553.t1 MTR_5g041570 52.041 98 47 0 113 210 137 234 3.39e-27 114
MS.gene015553.t1 MTR_4g082040 50.000 98 49 0 113 210 108 205 1.23e-26 112
MS.gene015553.t1 MTR_6g074860 49.485 97 49 0 113 209 7 103 5.57e-26 106
MS.gene015553.t1 MTR_5g029840 48.039 102 52 1 110 210 14 115 7.99e-26 108
MS.gene015553.t1 MTR_3g074520 49.524 105 50 2 108 210 12 115 2.87e-25 106
MS.gene015553.t1 MTR_1g100653 44.545 110 60 1 106 214 10 119 3.81e-25 105
MS.gene015553.t1 MTR_4g091490 44.860 107 58 1 105 210 10 116 4.24e-25 106
MS.gene015553.t1 MTR_2g011660 45.794 107 57 1 105 210 10 116 1.04e-24 105
MS.gene015553.t1 MTR_0008s0470 39.103 156 88 2 108 262 13 162 1.20e-24 103
MS.gene015553.t1 MTR_4g478180 27.508 309 192 8 108 412 13 293 1.39e-24 105
MS.gene015553.t1 MTR_3g097450 39.850 133 77 2 110 239 14 146 1.81e-24 103
MS.gene015553.t1 MTR_3g097450 33.663 101 64 2 56 156 15 112 6.87e-11 63.5
MS.gene015553.t1 MTR_3g089045 47.170 106 56 0 113 218 19 124 1.97e-24 103
MS.gene015553.t1 MTR_2g064160 47.115 104 53 2 109 210 11 114 2.83e-24 103
MS.gene015553.t1 MTR_2g097910 44.068 118 60 2 108 219 20 137 5.17e-24 102
MS.gene015553.t1 MTR_0008s0390 40.441 136 77 2 108 239 13 148 5.41e-24 101
MS.gene015553.t1 MTR_4g100720 47.059 102 53 1 112 212 17 118 5.98e-24 99.0
MS.gene015553.t1 MTR_3g028740 48.077 104 53 1 108 210 22 125 7.08e-24 102
MS.gene015553.t1 MTR_1g085640 47.115 104 54 1 108 210 12 115 7.10e-24 103
MS.gene015553.t1 MTR_7g110830 48.077 104 53 1 108 210 12 115 7.70e-24 103
MS.gene015553.t1 MTR_1g073170 45.378 119 61 3 100 216 12 128 8.12e-24 100
MS.gene015553.t1 MTR_1g073170 38.384 99 58 2 54 152 21 116 6.39e-12 66.2
MS.gene015553.t1 MTR_6g027370 43.243 111 62 1 101 210 89 199 8.29e-24 102
MS.gene015553.t1 MTR_3g052450 44.762 105 57 1 107 210 39 143 8.38e-24 104
MS.gene015553.t1 MTR_6g027340 44.211 95 53 0 110 204 16 110 1.00e-23 99.0
MS.gene015553.t1 MTR_1g062940 47.619 105 54 1 107 210 5 109 1.42e-23 99.0
MS.gene015553.t1 MTR_5g007370 44.231 104 57 1 108 210 12 115 1.64e-23 100
MS.gene015553.t1 MTR_5g088080 48.571 105 52 2 107 209 11 115 1.91e-23 99.8
MS.gene015553.t1 MTR_5g088150 48.571 105 52 2 107 209 11 115 1.91e-23 99.8
MS.gene015553.t1 MTR_5g488210 48.571 105 52 2 107 209 11 115 1.91e-23 99.8
MS.gene015553.t1 MTR_2g096380 45.283 106 57 1 107 211 5 110 1.96e-23 99.0
MS.gene015553.t1 MTR_1g085040 46.667 105 53 2 108 210 12 115 2.19e-23 101
MS.gene015553.t1 MTR_7g086960 48.980 98 50 0 113 210 92 189 2.28e-23 101
MS.gene015553.t1 MTR_6g027360 44.000 100 56 0 105 204 73 172 2.32e-23 100
MS.gene015553.t1 MTR_5g088640 46.218 119 60 3 107 221 11 129 2.47e-23 99.8
MS.gene015553.t1 MTR_5g488170 46.218 119 60 3 107 221 11 129 2.57e-23 99.0
MS.gene015553.t1 MTR_1g045610 49.038 104 50 2 110 211 23 125 3.04e-23 99.0
MS.gene015553.t1 MTR_1g045610 29.839 124 83 3 38 161 7 126 9.95e-11 62.8
MS.gene015553.t1 MTR_3g052430 43.810 105 58 1 107 210 40 144 3.12e-23 103
MS.gene015553.t1 MTR_0008s0280 38.710 124 75 1 110 232 14 137 3.78e-23 98.2
MS.gene015553.t1 MTR_0008s0280 30.769 104 69 2 53 156 12 112 8.25e-11 62.4
MS.gene015553.t1 MTR_8g095390 45.098 102 55 1 110 210 14 115 4.18e-23 100
MS.gene015553.t1 MTR_8g020490 42.593 108 61 1 110 216 10 117 4.35e-23 98.6
MS.gene015553.t1 MTR_5g062790 41.045 134 75 3 107 236 8 141 4.40e-23 99.8
MS.gene015553.t1 MTR_8g017440 45.714 105 53 3 109 210 12 115 4.97e-23 100
MS.gene015553.t1 MTR_4g073420 46.078 102 54 1 110 210 14 115 4.98e-23 99.0
MS.gene015553.t1 MTR_4g073420 34.653 101 63 2 56 156 15 112 3.12e-11 64.3
MS.gene015553.t1 MTR_2g099740 40.441 136 73 4 109 241 12 142 5.89e-23 100
MS.gene015553.t1 MTR_3g461490 44.954 109 58 2 107 213 10 118 8.37e-23 99.4
MS.gene015553.t1 MTR_8g017540 45.714 105 53 3 109 210 58 161 8.60e-23 100
MS.gene015553.t1 MTR_4g063100 47.059 102 53 1 110 210 9 110 1.04e-22 97.4
MS.gene015553.t1 MTR_4g065017 44.444 108 59 1 104 210 13 120 1.26e-22 99.0
MS.gene015553.t1 MTR_4g105130 44.231 104 57 1 108 210 12 115 1.28e-22 99.4
MS.gene015553.t1 MTR_0251s0050 46.154 104 55 1 108 210 13 116 1.48e-22 97.4
MS.gene015553.t1 MTR_3g011610 43.925 107 59 1 108 213 37 143 1.48e-22 100
MS.gene015553.t1 MTR_1g112760 44.762 105 55 2 108 210 13 116 1.71e-22 96.3
MS.gene015553.t1 MTR_7g096930 47.115 104 54 1 108 210 12 115 1.90e-22 97.4
MS.gene015553.t1 MTR_7g096930 34.951 103 64 2 54 156 13 112 3.77e-11 64.3
MS.gene015553.t1 MTR_8g017500 42.609 115 62 3 99 210 2 115 2.08e-22 98.6
MS.gene015553.t1 MTR_8g098860 45.370 108 57 2 105 210 8 115 2.36e-22 97.8
MS.gene015553.t1 MTR_1g110460 42.056 107 61 1 106 211 24 130 2.44e-22 97.8
MS.gene015553.t1 MTR_3g077110 45.714 105 54 2 108 210 12 115 2.48e-22 98.2
MS.gene015553.t1 MTR_4g485530 43.810 105 58 1 107 210 11 115 2.79e-22 94.7
MS.gene015553.t1 MTR_8g031360 47.170 106 52 3 108 210 13 117 3.85e-22 97.1
MS.gene015553.t1 MTR_5g088610 43.333 120 64 3 107 222 8 127 5.48e-22 97.4
MS.gene015553.t1 MTR_2g089420 37.500 160 90 4 105 255 8 166 5.50e-22 98.6
MS.gene015553.t1 MTR_4g082230 42.373 118 63 2 108 224 12 125 5.74e-22 98.2
MS.gene015553.t1 MTR_7g115650 37.013 154 89 4 108 256 12 162 6.02e-22 94.0
MS.gene015553.t1 MTR_1g021230 45.370 108 58 1 108 214 57 164 6.90e-22 98.2
MS.gene015553.t1 MTR_6g080360 36.416 173 95 4 41 203 455 622 7.02e-22 99.8
MS.gene015553.t1 MTR_6g080360 31.667 180 110 3 38 207 399 575 6.67e-20 93.6
MS.gene015553.t1 MTR_3g083540 44.231 104 57 1 108 210 41 144 8.01e-22 95.9
MS.gene015553.t1 MTR_8g027345 42.982 114 64 1 108 220 12 125 8.08e-22 95.9
MS.gene015553.t1 MTR_5g079670 41.176 102 59 1 110 210 13 114 8.30e-22 94.0
MS.gene015553.t1 MTR_6g090405 45.113 133 63 5 109 231 12 144 8.72e-22 94.7
MS.gene015553.t1 MTR_7g010210 43.519 108 60 1 110 216 14 121 9.26e-22 95.1
MS.gene015553.t1 MTR_7g010210 43.519 108 60 1 110 216 14 121 1.03e-21 96.3
MS.gene015553.t1 MTR_6g080360 36.416 173 95 4 41 203 235 402 1.08e-21 99.0
MS.gene015553.t1 MTR_6g080360 31.111 180 111 3 38 207 179 355 1.16e-19 92.8
MS.gene015553.t1 MTR_4g082290 42.373 118 63 2 108 224 12 125 1.19e-21 97.1
MS.gene015553.t1 MTR_8g017340 47.525 101 49 3 113 210 17 116 1.40e-21 97.8
MS.gene015553.t1 MTR_6g055910 42.857 119 67 1 97 214 3 121 1.44e-21 94.7
MS.gene015553.t1 MTR_2g089620 44.231 104 57 1 108 210 12 115 2.73e-21 95.1
MS.gene015553.t1 MTR_1g043080 46.154 104 55 1 108 210 12 115 3.07e-21 93.2
MS.gene015553.t1 MTR_8g468380 40.404 99 59 0 112 210 24 122 3.51e-21 96.3
MS.gene015553.t1 MTR_5g038910 39.000 100 61 0 112 211 28 127 3.57e-21 96.3
MS.gene015553.t1 MTR_7g076740 47.170 106 52 3 108 210 12 116 3.77e-21 94.0
MS.gene015553.t1 MTR_8g017390 45.545 101 51 3 113 210 17 116 3.98e-21 96.3
MS.gene015553.t1 MTR_8g042410 42.991 107 60 1 108 213 37 143 3.98e-21 96.7
MS.gene015553.t1 MTR_5g038910 39.000 100 61 0 112 211 28 127 4.15e-21 95.5
MS.gene015553.t1 MTR_5g010020 45.631 103 54 2 105 205 8 110 4.22e-21 94.7
MS.gene015553.t1 MTR_1g043050 45.192 104 56 1 108 210 12 115 4.57e-21 92.8
MS.gene015553.t1 MTR_5g042030 43.269 104 58 1 108 210 7 110 4.74e-21 93.6
MS.gene015553.t1 MTR_7g087130 39.669 121 72 1 110 229 14 134 5.96e-21 94.4
MS.gene015553.t1 MTR_1g076150 45.714 105 54 2 108 210 12 115 8.15e-21 92.0
MS.gene015553.t1 MTR_8g006470 47.059 102 52 2 110 209 12 113 8.88e-21 92.8
MS.gene015553.t1 MTR_8g017350 46.535 101 50 3 113 210 17 116 1.06e-20 95.9
MS.gene015553.t1 MTR_7g111290 47.000 100 50 2 108 205 12 110 1.32e-20 94.0
MS.gene015553.t1 MTR_4g102380 46.602 103 52 2 110 210 14 115 1.32e-20 92.0
MS.gene015553.t1 MTR_1g017000 46.667 105 53 3 109 210 12 116 1.82e-20 90.9
MS.gene015553.t1 MTR_2g089450 43.689 103 57 1 108 209 12 114 1.84e-20 90.9
MS.gene015553.t1 MTR_7g011170 43.269 104 58 1 108 210 12 115 1.93e-20 92.0
MS.gene015553.t1 MTR_0140s0030 37.903 124 68 2 108 226 13 132 2.07e-20 92.4
MS.gene015553.t1 MTR_0489s0020 37.903 124 68 2 108 226 13 132 2.07e-20 92.4
MS.gene015553.t1 MTR_3g103570 45.283 106 56 2 107 210 11 116 2.14e-20 92.8
MS.gene015553.t1 MTR_1g100667 42.718 103 58 1 113 214 18 120 2.20e-20 91.3
MS.gene015553.t1 MTR_7g035075 42.308 104 59 1 107 209 13 116 2.54e-20 89.4
MS.gene015553.t1 MTR_7g035075 33.333 117 75 2 54 170 15 128 1.29e-11 64.3
MS.gene015553.t1 MTR_0197s0010 39.516 124 72 2 112 234 5 126 2.93e-20 89.7
MS.gene015553.t1 MTR_4g125520 41.346 104 60 1 108 210 12 115 5.91e-20 90.9
MS.gene015553.t1 MTR_6g009430 43.269 104 57 2 109 210 12 115 8.04e-20 90.9
MS.gene015553.t1 MTR_3g065440 45.714 105 54 2 108 210 12 115 9.69e-20 90.1
MS.gene015553.t1 MTR_4g057635 48.148 108 53 3 109 213 12 119 1.12e-19 90.1
MS.gene015553.t1 MTR_0063s0090 44.554 101 53 2 110 208 14 113 1.15e-19 88.2
MS.gene015553.t1 MTR_5g078140 45.714 105 54 2 108 210 12 115 1.19e-19 90.1
MS.gene015553.t1 MTR_2g034790 43.269 104 58 1 108 210 12 115 1.70e-19 89.7
MS.gene015553.t1 MTR_6g012690 42.308 104 59 1 108 210 12 115 2.19e-19 89.7
MS.gene015553.t1 MTR_4g121460 43.269 104 58 1 108 210 12 115 2.22e-19 89.7
MS.gene015553.t1 MTR_2g033170 40.517 116 66 2 107 221 23 136 2.37e-19 89.4
MS.gene015553.t1 MTR_1g086530 38.938 113 66 2 110 221 35 145 3.44e-19 87.8
MS.gene015553.t1 MTR_7g117730 43.434 99 55 1 113 210 17 115 4.13e-19 87.4
MS.gene015553.t1 MTR_4g128190 39.344 122 58 4 104 221 7 116 4.35e-19 86.7
MS.gene015553.t1 MTR_5g078860 41.346 104 60 1 108 210 7 110 4.51e-19 88.2
MS.gene015553.t1 MTR_5g014990 44.340 106 57 2 107 210 11 116 4.84e-19 88.2
MS.gene015553.t1 MTR_3g039990 40.196 102 60 1 110 210 15 116 4.88e-19 88.2
MS.gene015553.t1 MTR_1g017140 43.396 106 58 2 107 210 11 116 6.25e-19 88.2
MS.gene015553.t1 MTR_1g083630 44.762 105 57 1 108 211 12 116 6.56e-19 90.1
MS.gene015553.t1 MTR_4g029540 41.818 110 62 2 108 215 10 119 7.73e-19 87.4
MS.gene015553.t1 MTR_5g078800 39.423 104 62 1 108 210 7 110 8.98e-19 86.3
MS.gene015553.t1 MTR_6g006030 40.385 104 61 1 107 209 13 116 9.11e-19 85.1
MS.gene015553.t1 MTR_2g088170 45.794 107 57 1 108 213 29 135 9.82e-19 89.0
MS.gene015553.t1 MTR_7g017260 31.461 178 107 2 110 284 27 192 1.20e-18 86.3
MS.gene015553.t1 MTR_2g067420 45.455 99 52 2 109 205 14 112 2.09e-18 86.7
MS.gene015553.t1 MTR_5g078930 40.196 102 60 1 110 210 11 112 2.69e-18 84.0
MS.gene015553.t1 MTR_5g079290 39.216 102 61 1 110 210 19 120 2.85e-18 85.1
MS.gene015553.t1 MTR_5g079220 36.036 111 70 1 101 210 14 124 3.50e-18 85.1
MS.gene015553.t1 MTR_2g095520 45.545 101 53 2 107 205 11 111 3.64e-18 85.9
MS.gene015553.t1 MTR_6g012180 40.594 101 51 2 110 205 14 110 3.87e-18 85.5
MS.gene015553.t1 MTR_5g079120 41.346 104 60 1 108 210 61 164 3.88e-18 85.5
MS.gene015553.t1 MTR_1g086510 38.053 113 67 2 110 221 23 133 4.50e-18 84.3
MS.gene015553.t1 MTR_4g097570 46.000 100 50 3 109 204 12 111 4.57e-18 85.1
MS.gene015553.t1 MTR_5g078910 39.423 104 62 1 108 210 7 110 5.21e-18 84.7
MS.gene015553.t1 MTR_7g102110 43.689 103 56 2 110 210 14 116 5.28e-18 84.3
MS.gene015553.t1 MTR_5g078950 38.889 108 64 2 103 208 1 108 7.16e-18 84.0
MS.gene015553.t1 MTR_8g060940 39.394 99 59 1 110 207 9 107 1.05e-17 82.8
MS.gene015553.t1 MTR_0001s0360 39.216 102 61 1 110 210 9 110 2.02e-17 82.4
MS.gene015553.t1 MTR_4g097570 45.455 99 51 3 109 204 12 110 3.94e-17 82.0
MS.gene015553.t1 MTR_6g055910 51.389 72 35 0 143 214 21 92 5.27e-17 81.3
MS.gene015553.t1 MTR_4g128670 44.898 98 52 2 110 205 14 111 9.48e-17 82.0
MS.gene015553.t1 MTR_4g123040 37.931 116 69 2 107 221 23 136 1.07e-16 81.3
MS.gene015553.t1 MTR_0247s0040 37.000 100 62 1 110 208 9 108 2.02e-16 77.4
MS.gene015553.t1 MTR_3g045430 40.187 107 62 2 108 212 12 118 3.77e-16 79.3
MS.gene015553.t1 MTR_0193s0090 36.634 101 63 1 110 209 9 109 5.67e-16 77.0
MS.gene015553.t1 MTR_2g096380 47.826 69 36 0 143 211 23 91 1.21e-15 76.3
MS.gene015553.t1 MTR_4g063100 48.529 68 35 0 143 210 14 81 1.55e-15 76.3
MS.gene015553.t1 MTR_7g109320 46.154 104 55 1 108 210 12 115 4.21e-15 77.0
MS.gene015553.t1 MTR_7g111290 52.381 63 30 0 143 205 6 68 1.69e-14 75.1
MS.gene015553.t1 MTR_7g061550 37.113 97 58 1 110 203 7 103 1.82e-14 75.1
MS.gene015553.t1 MTR_1g085880 41.414 99 56 2 113 209 17 115 1.95e-14 72.4
MS.gene015553.t1 MTR_7g035300 39.785 93 44 3 113 205 79 159 1.21e-13 70.9
MS.gene015553.t1 MTR_1g085770 41.414 99 56 2 113 209 17 115 1.26e-13 72.0
MS.gene015553.t1 MTR_7g115550 39.759 83 49 1 113 195 10 91 9.34e-12 67.8
MS.gene015553.t1 MTR_7g115550 39.759 83 49 1 113 195 10 91 9.47e-12 68.2
MS.gene015553.t1 MTR_5g007300 37.662 77 47 1 108 183 64 140 2.80e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene015553.t1 AT3G09370 38.647 414 191 10 28 428 51 414 9.69e-69 228
MS.gene015553.t1 AT3G09370 38.647 414 191 10 28 428 56 419 9.71e-69 228
MS.gene015553.t1 AT3G09370 38.647 414 191 10 28 428 64 427 1.46e-68 228
MS.gene015553.t1 AT5G02320 63.226 155 54 1 56 210 16 167 4.41e-65 218
MS.gene015553.t1 AT5G02320 63.226 155 54 1 56 210 76 227 6.03e-65 219
MS.gene015553.t1 AT5G02320 63.226 155 54 1 56 210 76 227 6.03e-65 219
MS.gene015553.t1 AT5G11510 60.127 158 60 1 53 210 27 181 2.75e-60 211
MS.gene015553.t1 AT5G11510 60.127 158 60 1 53 210 27 181 3.18e-60 211
MS.gene015553.t1 AT5G11510 60.127 158 60 1 53 210 27 181 6.41e-60 212
MS.gene015553.t1 AT5G11510 60.127 158 60 1 53 210 27 181 6.41e-60 212
MS.gene015553.t1 AT5G11510 60.127 158 60 1 53 210 27 181 6.41e-60 212
MS.gene015553.t1 AT4G32730 59.494 158 61 1 53 210 33 187 1.78e-59 209
MS.gene015553.t1 AT4G32730 59.494 158 61 1 53 210 33 187 6.13e-59 209
MS.gene015553.t1 AT4G32730 59.494 158 61 1 53 210 33 187 6.13e-59 209
MS.gene015553.t1 AT4G32730 59.494 158 61 1 53 210 33 187 6.13e-59 209
MS.gene015553.t1 AT4G32730 59.494 158 61 1 53 210 33 187 6.13e-59 209
MS.gene015553.t1 AT4G00540 51.163 172 73 3 53 216 44 212 2.88e-49 174
MS.gene015553.t1 AT4G00540 36.190 105 60 3 52 153 100 200 5.04e-11 65.1
MS.gene015553.t1 AT4G00540 51.163 172 73 3 53 216 42 210 1.04e-48 173
MS.gene015553.t1 AT4G00540 36.190 105 60 3 52 153 98 198 7.90e-11 64.3
MS.gene015553.t1 AT4G18770 50.000 134 65 1 100 233 207 338 6.38e-40 149
MS.gene015553.t1 AT4G18770 37.113 97 57 2 56 152 218 310 4.28e-13 71.6
MS.gene015553.t1 AT5G58850 50.893 112 55 0 101 212 96 207 5.65e-36 138
MS.gene015553.t1 AT5G58850 34.074 135 80 4 23 152 68 198 3.36e-11 65.5
MS.gene015553.t1 AT3G27785 55.238 105 47 0 108 212 187 291 8.00e-35 135
MS.gene015553.t1 AT3G27785 37.113 97 57 2 56 152 190 282 8.90e-13 70.5
MS.gene015553.t1 AT5G40360 52.727 110 52 0 110 219 158 267 3.82e-34 132
MS.gene015553.t1 AT5G40360 33.333 141 84 5 12 152 121 251 7.85e-12 67.0
MS.gene015553.t1 AT3G09230 52.885 104 49 0 107 210 52 155 6.58e-33 129
MS.gene015553.t1 AT3G09230 36.634 101 60 2 56 156 56 152 4.00e-11 65.1
MS.gene015553.t1 AT5G11050 45.000 120 66 0 93 212 88 207 2.03e-32 128
MS.gene015553.t1 AT4G37260 47.414 116 61 0 105 220 8 123 1.96e-31 123
MS.gene015553.t1 AT3G55730 50.980 102 50 0 109 210 55 156 7.71e-31 123
MS.gene015553.t1 AT5G67300 50.962 104 51 0 107 210 3 106 2.00e-30 120
MS.gene015553.t1 AT3G50060 50.000 108 54 0 107 214 3 110 3.63e-30 119
MS.gene015553.t1 AT2G23290 50.943 106 52 0 107 212 10 115 4.54e-30 119
MS.gene015553.t1 AT2G39880 50.000 104 52 0 109 212 49 152 7.00e-30 120
MS.gene015553.t1 AT2G25230 50.485 103 51 0 107 209 23 125 4.03e-29 115
MS.gene015553.t1 AT1G69560 50.000 98 49 0 113 210 126 223 2.18e-27 112
MS.gene015553.t1 AT1G69560 50.000 98 49 0 113 210 110 207 2.25e-27 112
MS.gene015553.t1 AT1G26780 48.544 103 53 0 108 210 96 198 4.78e-27 110
MS.gene015553.t1 AT1G26780 48.544 103 53 0 108 210 96 198 9.27e-27 111
MS.gene015553.t1 AT1G17950 48.485 99 51 0 113 211 8 106 1.20e-26 108
MS.gene015553.t1 AT4G33450 48.980 98 50 0 113 210 22 119 1.69e-26 108
MS.gene015553.t1 AT5G40430 45.370 108 58 1 107 214 51 157 2.70e-26 107
MS.gene015553.t1 AT3G29020 42.857 126 63 1 113 238 68 184 5.21e-26 106
MS.gene015553.t1 AT5G17800 43.200 125 62 2 113 228 96 220 1.06e-25 107
MS.gene015553.t1 AT5G16770 49.038 104 52 1 108 210 12 115 1.38e-25 107
MS.gene015553.t1 AT5G16770 49.038 104 52 1 108 210 12 115 1.38e-25 107
MS.gene015553.t1 AT5G16770 49.038 104 52 1 108 210 12 115 1.71e-25 107
MS.gene015553.t1 AT5G16770 49.038 104 52 1 108 210 12 115 1.71e-25 107
MS.gene015553.t1 AT3G29020 42.857 126 63 1 113 238 70 186 1.86e-25 106
MS.gene015553.t1 AT1G35515 48.039 102 52 1 110 210 14 115 3.96e-25 103
MS.gene015553.t1 AT1G73410 48.039 102 53 0 113 214 9 110 7.19e-25 102
MS.gene015553.t1 AT1G73410 49.495 99 50 0 113 211 9 107 8.70e-25 103
MS.gene015553.t1 AT4G01680 48.077 104 53 1 108 210 12 115 1.78e-24 102
MS.gene015553.t1 AT5G59780 43.243 111 62 1 102 211 2 112 1.92e-24 102
MS.gene015553.t1 AT3G02940 48.077 104 53 1 108 210 12 115 3.01e-24 103
MS.gene015553.t1 AT3G12720 44.860 107 56 2 106 210 20 125 3.09e-24 103
MS.gene015553.t1 AT5G40330 43.396 106 59 1 106 210 10 115 3.34e-24 100
MS.gene015553.t1 AT5G14750 43.519 108 60 1 104 210 12 119 3.76e-24 100
MS.gene015553.t1 AT1G22640 46.078 102 54 1 110 210 14 115 3.77e-24 101
MS.gene015553.t1 AT1G22640 34.653 101 63 2 56 156 15 112 3.26e-11 63.9
MS.gene015553.t1 AT3G02940 48.077 104 53 1 108 210 12 115 4.19e-24 103
MS.gene015553.t1 AT3G02940 48.077 104 53 1 108 210 12 115 4.19e-24 103
MS.gene015553.t1 AT3G46130 46.602 103 54 1 110 211 11 113 4.92e-24 101
MS.gene015553.t1 AT3G30210 40.719 167 91 5 110 270 29 193 4.99e-24 101
MS.gene015553.t1 AT4G01680 48.077 104 53 1 108 210 12 115 5.15e-24 103
MS.gene015553.t1 AT1G56160 47.619 105 51 3 109 210 14 117 5.61e-24 102
MS.gene015553.t1 AT5G26660 39.394 165 82 6 108 257 12 173 6.27e-24 103
MS.gene015553.t1 AT1G34670 49.038 104 52 1 108 210 12 115 8.40e-24 102
MS.gene015553.t1 AT5G10280 47.619 105 52 2 108 210 12 115 8.91e-24 102
MS.gene015553.t1 AT3G27920 36.905 168 88 4 105 254 11 178 9.75e-24 99.8
MS.gene015553.t1 AT4G28110 46.078 102 54 1 110 210 14 115 1.00e-23 101
MS.gene015553.t1 AT3G18100 38.356 146 86 2 58 203 498 639 1.01e-23 105
MS.gene015553.t1 AT3G18100 31.847 157 103 3 55 210 442 595 6.92e-21 96.7
MS.gene015553.t1 AT3G18100 32.558 129 79 3 91 217 423 545 2.30e-12 70.1
MS.gene015553.t1 AT3G18100 32.381 105 67 2 48 152 539 639 9.77e-11 64.7
MS.gene015553.t1 AT3G18100 38.356 146 86 2 58 203 450 591 1.03e-23 105
MS.gene015553.t1 AT3G18100 31.847 157 103 3 55 210 394 547 8.48e-21 96.3
MS.gene015553.t1 AT3G18100 32.558 129 79 3 91 217 375 497 2.78e-12 69.7
MS.gene015553.t1 AT5G39700 42.400 125 66 2 113 231 59 183 1.23e-23 98.6
MS.gene015553.t1 AT3G18100 38.356 146 86 2 58 203 337 478 1.28e-23 104
MS.gene015553.t1 AT3G18100 31.847 157 103 3 55 210 281 434 1.03e-20 95.9
MS.gene015553.t1 AT3G18100 32.558 129 79 3 91 217 262 384 4.01e-12 68.9
MS.gene015553.t1 AT1G74080 46.602 103 54 1 108 209 12 114 1.29e-23 102
MS.gene015553.t1 AT3G18100 38.356 146 86 2 58 203 285 426 1.47e-23 104
MS.gene015553.t1 AT3G18100 31.847 157 103 3 55 210 229 382 1.05e-20 95.9
MS.gene015553.t1 AT3G18100 32.558 129 79 3 91 217 210 332 4.42e-12 68.9
MS.gene015553.t1 AT3G13890 46.154 104 54 2 109 210 12 115 1.54e-23 102
MS.gene015553.t1 AT2G47190 42.241 116 64 2 107 221 19 132 1.63e-23 100
MS.gene015553.t1 AT5G65230 48.077 104 53 1 108 210 12 115 1.64e-23 101
MS.gene015553.t1 AT5G06100 40.833 120 67 2 95 213 22 138 1.68e-23 103
MS.gene015553.t1 AT4G09460 46.078 102 54 1 110 210 14 115 1.94e-23 99.4
MS.gene015553.t1 AT4G21440 45.192 104 56 1 108 210 12 115 1.96e-23 101
MS.gene015553.t1 AT3G11440 43.925 107 59 1 108 213 41 147 1.98e-23 103
MS.gene015553.t1 AT1G18570 46.154 104 55 1 108 210 13 116 2.00e-23 101
MS.gene015553.t1 AT5G06100 40.833 120 67 2 95 213 22 138 2.12e-23 103
MS.gene015553.t1 AT5G06100 40.833 120 67 2 95 213 22 138 2.12e-23 103
MS.gene015553.t1 AT5G06100 40.833 120 67 2 95 213 22 138 2.12e-23 103
MS.gene015553.t1 AT5G06100 40.833 120 67 2 95 213 22 138 2.12e-23 103
MS.gene015553.t1 AT4G13480 50.459 109 49 3 110 216 8 113 2.29e-23 99.8
MS.gene015553.t1 AT4G13480 35.922 103 63 2 54 156 7 106 4.68e-11 63.5
MS.gene015553.t1 AT1G57560 46.667 105 53 2 108 210 12 115 2.42e-23 99.8
MS.gene015553.t1 AT1G57560 46.667 105 53 2 108 210 12 115 2.74e-23 100
MS.gene015553.t1 AT3G13540 45.455 99 53 1 113 210 28 126 3.88e-23 98.6
MS.gene015553.t1 AT3G48920 34.536 194 110 5 113 292 23 213 4.44e-23 99.0
MS.gene015553.t1 AT3G11440 43.925 107 59 1 108 213 41 147 4.48e-23 102
MS.gene015553.t1 AT3G11440 43.925 107 59 1 108 213 41 147 4.48e-23 102
MS.gene015553.t1 AT3G11440 43.925 107 59 1 108 213 41 147 4.48e-23 102
MS.gene015553.t1 AT4G05100 45.192 104 56 1 108 210 13 116 4.67e-23 100
MS.gene015553.t1 AT3G53200 44.860 107 58 1 108 213 9 115 4.74e-23 98.2
MS.gene015553.t1 AT1G09540 47.619 105 52 2 108 210 12 115 5.12e-23 100
MS.gene015553.t1 AT3G61250 46.667 105 53 2 108 210 12 115 8.99e-23 98.6
MS.gene015553.t1 AT4G38620 45.098 102 55 1 110 210 14 115 9.37e-23 98.2
MS.gene015553.t1 AT4G38620 34.653 101 63 2 56 156 15 112 5.67e-11 63.5
MS.gene015553.t1 AT4G26930 45.631 103 55 1 108 209 19 121 1.03e-22 100
MS.gene015553.t1 AT2G32460 45.794 107 57 1 108 213 6 112 1.13e-22 100
MS.gene015553.t1 AT2G32460 45.794 107 57 1 108 213 18 124 1.19e-22 100
MS.gene015553.t1 AT1G74430 44.231 104 57 1 108 210 12 115 1.21e-22 97.8
MS.gene015553.t1 AT3G08500 47.115 104 54 1 108 210 30 133 1.31e-22 99.0
MS.gene015553.t1 AT5G56110 45.794 107 56 2 109 213 12 118 1.82e-22 98.2
MS.gene015553.t1 AT3G12820 48.571 105 50 3 109 210 14 117 1.98e-22 96.3
MS.gene015553.t1 AT4G01680 43.103 116 53 1 108 210 12 127 2.06e-22 98.6
MS.gene015553.t1 AT3G24310 47.706 109 53 3 110 216 20 126 2.08e-22 97.1
MS.gene015553.t1 AT3G24310 34.259 108 68 2 54 161 19 123 5.40e-11 63.5
MS.gene015553.t1 AT3G13890 42.478 113 54 2 109 210 12 124 2.41e-22 98.6
MS.gene015553.t1 AT5G35550 39.655 116 69 1 103 217 9 124 2.66e-22 96.7
MS.gene015553.t1 AT1G79180 45.161 124 63 3 109 230 14 134 3.58e-22 97.1
MS.gene015553.t1 AT5G54230 45.098 102 55 1 110 210 14 115 3.61e-22 97.4
MS.gene015553.t1 AT3G23250 45.192 104 56 1 108 210 12 115 4.39e-22 96.7
MS.gene015553.t1 AT3G23250 34.951 103 64 2 54 156 13 112 6.46e-12 66.6
MS.gene015553.t1 AT5G61420 48.077 104 53 1 108 210 12 115 4.58e-22 97.8
MS.gene015553.t1 AT1G63910 45.370 108 57 2 105 210 8 115 8.01e-22 97.4
MS.gene015553.t1 AT4G34990 45.098 102 55 1 110 210 14 115 9.29e-22 95.5
MS.gene015553.t1 AT5G12870 44.231 104 57 1 108 210 18 121 9.95e-22 95.5
MS.gene015553.t1 AT5G07690 48.544 103 52 1 108 209 12 114 1.49e-21 95.9
MS.gene015553.t1 AT5G07700 47.115 104 54 1 108 210 12 115 2.08e-21 95.5
MS.gene015553.t1 AT5G07700 47.115 104 54 1 108 210 12 115 2.08e-21 95.5
MS.gene015553.t1 AT2G26960 31.674 221 128 6 108 311 20 234 2.12e-21 96.7
MS.gene015553.t1 AT2G16720 43.137 102 57 1 110 210 14 115 2.78e-21 94.0
MS.gene015553.t1 AT5G55020 44.660 103 56 1 108 209 26 128 2.79e-21 97.1
MS.gene015553.t1 AT3G47600 40.336 119 62 2 110 223 14 128 3.34e-21 94.7
MS.gene015553.t1 AT5G62470 43.564 101 57 0 110 210 14 114 3.63e-21 95.1
MS.gene015553.t1 AT5G23000 49.524 105 50 3 109 210 12 116 7.79e-21 93.6
MS.gene015553.t1 AT2G31180 46.226 106 55 2 109 212 12 117 1.02e-20 91.7
MS.gene015553.t1 AT4G12350 44.340 106 55 3 108 210 11 115 1.15e-20 92.4
MS.gene015553.t1 AT3G01140 44.231 104 57 1 108 210 12 115 1.31e-20 93.2
MS.gene015553.t1 AT4G17785 42.157 102 58 1 110 210 15 116 1.31e-20 93.6
MS.gene015553.t1 AT3G01140 44.231 104 57 1 108 210 55 158 1.44e-20 94.0
MS.gene015553.t1 AT4G17785 42.157 102 58 1 110 210 15 116 1.47e-20 93.6
MS.gene015553.t1 AT3G28470 43.000 100 56 1 107 205 11 110 2.02e-20 92.4
MS.gene015553.t1 AT1G16490 43.697 119 64 3 109 225 14 131 2.09e-20 91.3
MS.gene015553.t1 AT5G15310 43.269 104 58 1 108 210 12 115 2.17e-20 90.9
MS.gene015553.t1 AT3G27810 38.571 140 74 3 107 245 19 147 2.31e-20 90.1
MS.gene015553.t1 AT3G27810 33.945 109 69 2 54 162 21 126 9.11e-11 62.4
MS.gene015553.t1 AT1G74650 44.118 102 56 1 110 210 14 115 2.58e-20 92.4
MS.gene015553.t1 AT4G25560 45.455 99 53 1 113 210 15 113 2.88e-20 91.3
MS.gene015553.t1 AT5G62470 43.396 106 51 2 110 210 14 115 3.21e-20 92.4
MS.gene015553.t1 AT5G40350 34.667 150 95 2 107 255 16 163 4.21e-20 89.0
MS.gene015553.t1 AT4G22680 45.631 103 53 2 110 210 14 115 4.26e-20 90.5
MS.gene015553.t1 AT5G15310 43.269 104 58 1 108 210 12 115 4.32e-20 91.7
MS.gene015553.t1 AT5G15310 43.269 104 58 1 108 210 12 115 4.32e-20 91.3
MS.gene015553.t1 AT1G06180 44.762 105 55 2 108 210 12 115 4.64e-20 89.7
MS.gene015553.t1 AT1G08810 41.964 112 56 2 108 214 12 119 5.02e-20 90.5
MS.gene015553.t1 AT4G37780 46.729 107 47 3 110 210 14 116 5.96e-20 90.9
MS.gene015553.t1 AT5G60890 43.137 102 57 1 110 210 14 115 6.32e-20 90.5
MS.gene015553.t1 AT1G14350 37.000 100 63 0 112 211 27 126 6.77e-20 92.4
MS.gene015553.t1 AT1G14350 37.000 100 63 0 112 211 27 126 6.77e-20 92.4
MS.gene015553.t1 AT2G26950 38.983 118 62 3 108 219 16 129 7.06e-20 91.7
MS.gene015553.t1 AT3G28910 43.137 102 57 1 110 210 14 115 7.67e-20 90.9
MS.gene015553.t1 AT5G57620 46.226 106 55 2 107 210 11 116 8.26e-20 90.9
MS.gene015553.t1 AT1G25340 41.748 103 59 1 110 211 20 122 1.02e-19 89.7
MS.gene015553.t1 AT1G66230 45.192 104 56 1 108 210 12 115 1.35e-19 89.4
MS.gene015553.t1 AT1G68320 38.889 108 65 1 105 211 16 123 1.37e-19 89.4
MS.gene015553.t1 AT5G16600 46.154 104 55 1 108 210 12 115 1.82e-19 89.7
MS.gene015553.t1 AT2G02820 36.000 100 64 0 112 211 32 131 1.91e-19 89.7
MS.gene015553.t1 AT3G49690 45.283 106 56 2 107 210 11 116 2.18e-19 89.4
MS.gene015553.t1 AT2G02820 36.000 100 64 0 112 211 32 131 2.62e-19 90.9
MS.gene015553.t1 AT2G02820 36.000 100 64 0 112 211 32 131 2.84e-19 90.5
MS.gene015553.t1 AT5G65790 44.340 106 57 2 107 210 11 116 3.12e-19 89.7
MS.gene015553.t1 AT3G60460 40.708 113 65 2 99 209 2 114 3.14e-19 88.6
MS.gene015553.t1 AT5G14340 41.905 105 58 2 108 210 24 127 3.74e-19 87.8
MS.gene015553.t1 AT1G25340 41.176 102 56 1 110 211 20 117 3.75e-19 87.8
MS.gene015553.t1 AT1G48000 39.091 110 64 2 113 221 37 144 4.09e-19 87.0
MS.gene015553.t1 AT5G52600 42.056 107 60 2 109 213 12 118 4.45e-19 85.9
MS.gene015553.t1 AT3G12820 55.882 68 30 0 143 210 2 69 4.96e-19 85.5
MS.gene015553.t1 AT1G25340 41.176 102 56 1 110 211 20 117 5.45e-19 87.8
MS.gene015553.t1 AT3G01530 39.130 115 69 1 101 214 18 132 7.30e-19 85.5
MS.gene015553.t1 AT1G18710 39.623 106 63 1 108 212 12 117 1.05e-18 86.3
MS.gene015553.t1 AT3G62610 43.269 104 58 1 108 210 12 115 1.51e-18 87.4
MS.gene015553.t1 AT5G26660 36.424 151 70 5 120 257 5 142 1.69e-18 86.7
MS.gene015553.t1 AT5G49330 44.231 104 57 1 108 210 12 115 2.74e-18 86.3
MS.gene015553.t1 AT1G66370 40.385 104 61 1 108 210 8 111 3.30e-18 84.3
MS.gene015553.t1 AT2G36890 42.623 122 64 4 109 224 12 133 3.57e-18 85.5
MS.gene015553.t1 AT5G14750 48.529 68 35 0 143 210 18 85 4.98e-18 82.0
MS.gene015553.t1 AT5G62320 40.708 113 55 3 108 210 13 123 5.13e-18 84.0
MS.gene015553.t1 AT2G36890 42.623 122 64 4 109 224 53 174 5.54e-18 85.5
MS.gene015553.t1 AT3G53200 50.704 71 35 0 143 213 12 82 6.17e-18 82.8
MS.gene015553.t1 AT5G35550 48.000 75 39 0 143 217 53 127 6.39e-18 84.0
MS.gene015553.t1 AT5G49620 38.793 116 68 2 107 221 25 138 7.11e-18 84.7
MS.gene015553.t1 AT1G79180 35.032 157 64 3 109 230 14 167 1.25e-17 84.3
MS.gene015553.t1 AT1G66380 40.741 108 63 1 104 210 4 111 2.34e-17 79.0
MS.gene015553.t1 AT2G47460 43.269 104 57 2 109 210 12 115 3.27e-17 83.6
MS.gene015553.t1 AT3G06490 37.931 116 69 2 107 221 18 131 5.84e-17 82.4
MS.gene015553.t1 AT3G47600 45.679 81 44 0 143 223 42 122 5.94e-17 82.4
MS.gene015553.t1 AT1G56650 40.741 108 63 1 104 210 4 111 7.88e-17 80.5
MS.gene015553.t1 AT5G52260 44.000 100 53 2 113 210 17 115 2.27e-16 79.7
MS.gene015553.t1 AT5G59780 47.826 69 36 0 143 211 23 91 3.26e-16 77.8
MS.gene015553.t1 AT3G46130 47.826 69 36 0 143 211 13 81 5.32e-16 77.4
MS.gene015553.t1 AT3G46130 47.826 69 36 0 143 211 23 91 6.53e-16 77.4
MS.gene015553.t1 AT1G66390 40.741 108 63 1 104 210 4 111 6.59e-16 77.8
MS.gene015553.t1 AT3G27810 39.806 103 51 2 143 245 7 98 3.60e-15 73.9
MS.gene015553.t1 AT5G40350 34.513 113 72 1 143 255 8 118 6.99e-15 72.8
MS.gene015553.t1 AT5G49620 34.615 130 68 3 107 221 25 152 1.10e-14 75.5
MS.gene015553.t1 AT2G37630 37.113 97 58 1 110 203 4 100 3.92e-14 74.3
MS.gene015553.t1 AT2G13960 50.000 62 28 1 55 116 75 133 2.60e-13 67.8
MS.gene015553.t1 AT2G13960 48.333 60 31 0 109 168 74 133 7.75e-11 60.8
MS.gene015553.t1 AT2G13960 50.820 61 27 1 56 116 41 98 4.01e-13 66.2
MS.gene015553.t1 AT2G13960 49.153 59 30 0 110 168 40 98 8.98e-12 62.4
MS.gene015553.t1 AT5G14750 45.614 57 31 0 154 210 2 58 9.11e-13 66.2
MS.gene015553.t1 AT5G14750 45.614 57 31 0 154 210 2 58 9.11e-13 66.2
MS.gene015553.t1 AT1G22640 49.123 57 29 0 154 210 2 58 4.01e-12 65.9
MS.gene015553.t1 AT3G23250 52.632 57 27 0 154 210 2 58 6.14e-12 65.9
MS.gene015553.t1 AT1G66380 45.588 68 37 0 143 210 11 78 6.56e-12 62.4
MS.gene015553.t1 AT1G09770 39.759 83 49 1 113 195 10 91 1.41e-11 67.4
MS.gene015553.t1 AT1G14350 32.143 84 44 1 128 211 13 83 1.74e-11 66.2
MS.gene015553.t1 AT1G14350 32.143 84 44 1 128 211 13 83 1.74e-11 66.2

Find 98 sgRNAs with CRISPR-Local

Find 187 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCATTTACTGCCATATATT+TGG 0.169401 5.1:-4226255 None:intergenic
TCGCCATTTGGGAAAATTAT+AGG 0.193856 5.1:-4227100 None:intergenic
CTCTTTGAGCTACTCAAAAT+TGG 0.226900 5.1:+4227176 MS.gene015553:CDS
AAGTTTCTTAGCACCGATTC+TGG 0.231780 5.1:-4227258 None:intergenic
GAGCTGAAGGATTTACAATT+TGG 0.232675 5.1:+4224583 MS.gene015553:CDS
CCTAAAGCAGGATGTGTAAT+TGG 0.235963 5.1:+4227396 MS.gene015553:CDS
GGATATGCTTGCAACAAATA+TGG 0.257399 5.1:+4227041 MS.gene015553:CDS
ATTCAACCAGTTACTTTGTT+TGG 0.258608 5.1:-4226803 None:intergenic
AGAACATTCCTTCTATTATA+AGG 0.263641 5.1:+4227295 MS.gene015553:CDS
CATCATTCCATGGAATTTCT+AGG 0.264210 5.1:-4227462 None:intergenic
CTTTCTTACTAGCTCAATTA+AGG 0.277662 5.1:-4225761 None:intergenic
ACCAAATATATGGCAGTAAA+TGG 0.297606 5.1:+4226254 MS.gene015553:CDS
CCAATTACACATCCTGCTTT+AGG 0.299396 5.1:-4227396 None:intergenic
ATTGAGCTAGTAAGAAAGTA+TGG 0.304423 5.1:+4225766 MS.gene015553:CDS
GTCCCAAACACCTTCTAAAA+TGG 0.308159 5.1:+4227362 MS.gene015553:CDS
AAGAGAAACCTTTCGCCATT+TGG 0.330050 5.1:-4227112 None:intergenic
ACAGATTCAAAGTTTATTGC+TGG 0.344818 5.1:+4227135 MS.gene015553:CDS
TTTCTCCCAAACAAAGTAAC+TGG 0.348007 5.1:+4226797 MS.gene015553:CDS
GCTCACTACTACCAAATATA+TGG 0.350001 5.1:+4226244 MS.gene015553:CDS
AGAGAAACCTTTCGCCATTT+GGG 0.351659 5.1:-4227111 None:intergenic
GTAACTGTTTCCATCTCATT+TGG 0.352658 5.1:-4226961 None:intergenic
TGAAGCAAGTCTCGATGATT+TGG 0.354497 5.1:-4224610 None:intergenic
TTCAACCAGTTACTTTGTTT+GGG 0.356118 5.1:-4226802 None:intergenic
ACAAGTGTCACTATTGCAAT+TGG 0.361751 5.1:-4224650 None:intergenic
TTTCGAATAAACACTCTAGT+TGG 0.364940 5.1:-4226844 None:intergenic
GCTGAAGATCAAAGTTTAGT+TGG 0.373736 5.1:+4226769 MS.gene015553:CDS
AAGAAGAGAAATGTTGGAAA+TGG 0.376076 5.1:+4224555 None:intergenic
TTTACAGCTGCATACTTCCC+TGG 0.377549 5.1:+4225543 MS.gene015553:intron
CTGGAATCATCCCTTGCTAC+AGG 0.380750 5.1:+4224676 MS.gene015553:CDS
ATGCTTCCGTAGAGGAATTT+CGG 0.382073 5.1:+4226866 MS.gene015553:CDS
GAAATTGCAAGGGTTCTTCC+TGG 0.388868 5.1:+4226280 MS.gene015553:CDS
TCATGCAGTGCTGACAAATA+TGG 0.415006 5.1:+4227336 MS.gene015553:CDS
TATTAGAGAAGAGCAGAAAC+TGG 0.419411 5.1:-4226722 None:intergenic
AGTTTCTTAGCACCGATTCT+GGG 0.426239 5.1:-4227257 None:intergenic
GTATCAGATAAGTACCTTCC+AGG 0.429985 5.1:-4226298 None:intergenic
GGGTGCTTGGACGGAGGAGG+AGG 0.459044 5.1:+4226210 MS.gene015553:CDS
TTCGAATAAACACTCTAGTT+GGG 0.460878 5.1:-4226843 None:intergenic
CGTGGCAGCTCCTAGGGCCT+CGG 0.462527 5.1:+4226909 MS.gene015553:CDS
CATAGCATTTCATCATTCCA+TGG 0.466711 5.1:-4227472 None:intergenic
AGATGCATGATGGAAGCATC+TGG 0.475066 5.1:+4225225 MS.gene015553:CDS
TCAGCACTGCATGACTTCCT+AGG 0.479875 5.1:-4227327 None:intergenic
AGAAATGTTGGAAATGGAAA+AGG 0.480080 5.1:+4224561 None:intergenic
ATGCTTCCATCGCTGGCAAA+AGG 0.480207 5.1:+4225581 MS.gene015553:CDS
AATAAAACCAGCACATGGTT+CGG 0.485028 5.1:+4226741 MS.gene015553:CDS
ACATTGAATGCTTCCATCGC+TGG 0.487314 5.1:+4225574 MS.gene015553:CDS
ATTCCTTCCTAGAAATTCCA+TGG 0.492413 5.1:+4227455 MS.gene015553:CDS
AATAGAAGGAATGTTCTCAT+AGG 0.496498 5.1:-4227289 None:intergenic
TTACAGCTGCATACTTCCCT+GGG 0.497263 5.1:+4225544 MS.gene015553:intron
CTTTCCGATACGACCTGGCA+TGG 0.501823 5.1:-4225818 None:intergenic
GAAAGTATGGTTTCAAGAGA+TGG 0.502613 5.1:+4225779 MS.gene015553:CDS
CAAGTGTCACTATTGCAATT+GGG 0.513710 5.1:-4224649 None:intergenic
ATGGAATTTCTAGGAAGGAA+TGG 0.513874 5.1:-4227453 None:intergenic
ATGTATTTATCTGCGAAGGT+AGG 0.514030 5.1:-4227006 None:intergenic
AGAAGAGCAGAAACTGGAAG+TGG 0.515412 5.1:-4226716 None:intergenic
GGAAGCATCTGGAAAAGTAT+AGG 0.516036 5.1:+4225236 MS.gene015553:CDS
AAGTAACAGTACTGGAAGAA+AGG 0.519260 5.1:-4227071 None:intergenic
AAATCCATGCCAGGTCGTAT+CGG 0.520235 5.1:+4225814 MS.gene015553:CDS
TGTATTTATCTGCGAAGGTA+GGG 0.525550 5.1:-4227005 None:intergenic
GGTCAATTTACCAAATGAGA+TGG 0.526258 5.1:+4226951 MS.gene015553:CDS
TAAATACATGAACTCATCGT+TGG 0.526619 5.1:+4227020 MS.gene015553:CDS
GAAGGAATGGAACAAATCCT+TGG 0.526705 5.1:-4227440 None:intergenic
GCTTTAACCGAACCATGTGC+TGG 0.527242 5.1:-4226748 None:intergenic
ACATCCATGTCACATCTAGT+AGG 0.527575 5.1:-4226691 None:intergenic
GAGGAAAGTTCAAGTTGGAA+TGG 0.528710 5.1:+4227209 MS.gene015553:CDS
CATTCAATGTCTGTTCGCCC+AGG 0.528988 5.1:-4225561 None:intergenic
TTATAAGGAAAAGATCTCCT+AGG 0.534381 5.1:+4227310 MS.gene015553:CDS
AAGCAACGTGAGCCCAGAAT+CGG 0.535475 5.1:+4227245 MS.gene015553:CDS
GGCCTCGTAAGTAACAGTAC+TGG 0.541786 5.1:-4227079 None:intergenic
TTTAATGATTCAGGAGGATG+AGG 0.543461 5.1:+4225738 MS.gene015553:intron
AAAGGGTGCTTGGACGGAGG+AGG 0.550944 5.1:+4226207 MS.gene015553:CDS
CATGAGAGGAAAGTTCAAGT+TGG 0.553845 5.1:+4227204 MS.gene015553:CDS
GTAAATGGTCAGAAATTGCA+AGG 0.561504 5.1:+4226269 MS.gene015553:CDS
TTTATTGCGAAATCCATGCC+AGG 0.564481 5.1:+4225805 MS.gene015553:CDS
CTGCGAAGGTAGGGTTGGCA+TGG 0.567546 5.1:-4226996 None:intergenic
GCTATCACAACTCCTAAAGC+AGG 0.569904 5.1:+4227384 MS.gene015553:CDS
GTTCATGTATTTATCTGCGA+AGG 0.570468 5.1:-4227010 None:intergenic
GAGATAGTCAAGATGCATGA+TGG 0.571639 5.1:+4225215 MS.gene015553:CDS
CGGAATCTGGACAGAAGAAG+AGG 0.572625 5.1:+4224930 MS.gene015553:CDS
TTGCAAGGGTTCTTCCTGGA+AGG 0.579944 5.1:+4226284 MS.gene015553:CDS
GGAAATGGAAAAGGAGCTGA+AGG 0.585968 5.1:+4224570 MS.gene015553:CDS
ATCAGACCGAAATTCCTCTA+CGG 0.589229 5.1:-4226872 None:intergenic
TGGAAAAGTATAGGTGGATG+CGG 0.589791 5.1:+4225245 MS.gene015553:CDS
TTTATCTGCGAAGGTAGGGT+TGG 0.592406 5.1:-4227001 None:intergenic
CATTGCTTTCCGATACGACC+TGG 0.594119 5.1:-4225823 None:intergenic
TGGAATCATCCCTTGCTACA+GGG 0.594296 5.1:+4224677 MS.gene015553:CDS
TCGGAAAGCAATGTCGAGAG+AGG 0.597044 5.1:+4225833 MS.gene015553:CDS
TTCCAGTACTGTTACTTACG+AGG 0.600409 5.1:+4227077 MS.gene015553:CDS
AAGAAACTTACCCTGTAGCA+AGG 0.603097 5.1:-4224687 None:intergenic
ATTCCATGGAATTTCTAGGA+AGG 0.603209 5.1:-4227458 None:intergenic
CAAAATTGGCTAATCATGAG+AGG 0.603609 5.1:+4227190 MS.gene015553:CDS
AGCATCTGGAAAAGTATAGG+TGG 0.605541 5.1:+4225239 MS.gene015553:CDS
ATTCAATGTCTGTTCGCCCA+GGG 0.615954 5.1:-4225560 None:intergenic
GATAATTTAAAACTCAACCA+AGG 0.617456 5.1:+4227423 MS.gene015553:CDS
TATTCGAAATGCTTCCGTAG+AGG 0.625592 5.1:+4226858 MS.gene015553:CDS
AGAAACTTACCCTGTAGCAA+GGG 0.640701 5.1:-4224686 None:intergenic
ATCACCTACTAGATGTGACA+TGG 0.666242 5.1:+4226687 MS.gene015553:CDS
TCTCTAATAAAACCAGCACA+TGG 0.683247 5.1:+4226736 MS.gene015553:CDS
TAAATGGTCAGAAATTGCAA+GGG 0.701805 5.1:+4226270 MS.gene015553:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTCATAAATAATATTCTGT+AGG + chr5.1:4225989-4226008 MS.gene015553:intron 15.0%
!!! GTACAAATTTTAACTATTAT+TGG + chr5.1:4225049-4225068 MS.gene015553:intron 15.0%
!! AACATAATAAATACCACAAA+AGG - chr5.1:4225119-4225138 None:intergenic 20.0%
!! ACAATGCTATAAAAAATCAT+TGG + chr5.1:4226635-4226654 MS.gene015553:CDS 20.0%
!! TTTGTGGTATTTATTATGTT+AGG + chr5.1:4225119-4225138 MS.gene015553:intron 20.0%
!!! AAGTGAAGTCAATTTTTTAA+AGG + chr5.1:4224727-4224746 MS.gene015553:intron 20.0%
!!! CATTTTATTGATATTTATGC+AGG - chr5.1:4226379-4226398 None:intergenic 20.0%
!!! CTTTTTAAGAAACATACATA+TGG - chr5.1:4226118-4226137 None:intergenic 20.0%
!!! TTATGCTATATTTTATCATG+AGG - chr5.1:4225421-4225440 None:intergenic 20.0%
!!! TTTCACAATTTTTGTTTGAT+AGG + chr5.1:4224878-4224897 MS.gene015553:intron 20.0%
!!! TTTCTGTCTTTGATTTTTTA+GGG - chr5.1:4226507-4226526 None:intergenic 20.0%
!!! TTTTCTGTCTTTGATTTTTT+AGG - chr5.1:4226508-4226527 None:intergenic 20.0%
! AGAACATTCCTTCTATTATA+AGG + chr5.1:4227295-4227314 MS.gene015553:CDS 25.0%
! ATAATGCAACAAACTACATT+TGG - chr5.1:4224846-4224865 None:intergenic 25.0%
! ATCTAATTCGTTGTATCATA+TGG + chr5.1:4226598-4226617 MS.gene015553:intron 25.0%
! ATGATCTTGTAAAAAGATCA+TGG + chr5.1:4225613-4225632 MS.gene015553:CDS 25.0%
! GTTTATAACTCAAACTAATC+TGG + chr5.1:4225505-4225524 MS.gene015553:intron 25.0%
! TCTAATTCGTTGTATCATAT+GGG + chr5.1:4226599-4226618 MS.gene015553:intron 25.0%
! TTGAAGCATGTATTTATAGA+GGG - chr5.1:4226354-4226373 None:intergenic 25.0%
!! AATGAGTTTAACTGCATTTT+GGG + chr5.1:4225355-4225374 MS.gene015553:intron 25.0%
!! GATAATTTAAAACTCAACCA+AGG + chr5.1:4227423-4227442 MS.gene015553:CDS 25.0%
!! GATCTTTTCCTTATAATAGA+AGG - chr5.1:4227306-4227325 None:intergenic 25.0%
!! TAATGAGTTTAACTGCATTT+TGG + chr5.1:4225354-4225373 MS.gene015553:intron 25.0%
!! TTTGAAGCATGTATTTATAG+AGG - chr5.1:4226355-4226374 None:intergenic 25.0%
!!! ACAAAAGTTGTCATTTTCAA+AGG - chr5.1:4225956-4225975 None:intergenic 25.0%
AACTAATCTGGTTGTTCAAT+TGG + chr5.1:4225517-4225536 MS.gene015553:intron 30.0%
AATAGAAGGAATGTTCTCAT+AGG - chr5.1:4227292-4227311 None:intergenic 30.0%
ACAGATTCAAAGTTTATTGC+TGG + chr5.1:4227135-4227154 MS.gene015553:CDS 30.0%
ACCAAATATATGGCAGTAAA+TGG + chr5.1:4226254-4226273 MS.gene015553:CDS 30.0%
ACCATTTACTGCCATATATT+TGG - chr5.1:4226258-4226277 None:intergenic 30.0%
ATTGAGCTAGTAAGAAAGTA+TGG + chr5.1:4225766-4225785 MS.gene015553:CDS 30.0%
CTTTCTTACTAGCTCAATTA+AGG - chr5.1:4225764-4225783 None:intergenic 30.0%
GGAAAAAAGTGAAAGAAGAT+TGG + chr5.1:4226930-4226949 MS.gene015553:CDS 30.0%
TAAATACATGAACTCATCGT+TGG + chr5.1:4227020-4227039 MS.gene015553:CDS 30.0%
TAAATGGTCAGAAATTGCAA+GGG + chr5.1:4226270-4226289 MS.gene015553:CDS 30.0%
TACTTCCATCTCTTGAAATT+AGG - chr5.1:4225885-4225904 None:intergenic 30.0%
TGTAAAAAGATCATGGACAA+AGG + chr5.1:4225620-4225639 MS.gene015553:CDS 30.0%
TTATAAGGAAAAGATCTCCT+AGG + chr5.1:4227310-4227329 MS.gene015553:CDS 30.0%
TTCGAATAAACACTCTAGTT+GGG - chr5.1:4226846-4226865 None:intergenic 30.0%
TTGTCAGAATATGAACTACT+AGG + chr5.1:4226142-4226161 MS.gene015553:intron 30.0%
TTTATTGTGCCAATATGTGT+TGG + chr5.1:4225679-4225698 MS.gene015553:intron 30.0%
TTTCGAATAAACACTCTAGT+TGG - chr5.1:4226847-4226866 None:intergenic 30.0%
! ATTCAACCAGTTACTTTGTT+TGG - chr5.1:4226806-4226825 None:intergenic 30.0%
! ATTTTGCAATCTCATGACTA+TGG + chr5.1:4225170-4225189 MS.gene015553:intron 30.0%
! CGGTCTGATAAAAACATTTT+TGG + chr5.1:4226886-4226905 MS.gene015553:CDS 30.0%
! TTCAACCAGTTACTTTGTTT+GGG - chr5.1:4226805-4226824 None:intergenic 30.0%
! TTCTATGCTTTGAATCAGAT+TGG + chr5.1:4226027-4226046 MS.gene015553:intron 30.0%
!! TTGTCTTTGTTATCCTTTTG+TGG + chr5.1:4225103-4225122 MS.gene015553:intron 30.0%
!!! ACTCGAAAGTGATTTTTTTG+AGG + chr5.1:4226406-4226425 MS.gene015553:intron 30.0%
!!! TGATAAAAACATTTTTGGCG+TGG + chr5.1:4226891-4226910 MS.gene015553:CDS 30.0%
AAAAAGATCATGGACAAAGG+AGG + chr5.1:4225623-4225642 MS.gene015553:CDS 35.0%
AACTACTAGGTGATCATTTC+AGG + chr5.1:4226155-4226174 MS.gene015553:intron 35.0%
AATAAAACCAGCACATGGTT+CGG + chr5.1:4226741-4226760 MS.gene015553:CDS 35.0%
ATGTATTTATCTGCGAAGGT+AGG - chr5.1:4227009-4227028 None:intergenic 35.0%
ATTCCTTCCTAGAAATTCCA+TGG + chr5.1:4227455-4227474 MS.gene015553:CDS 35.0%
CAAAATTGGCTAATCATGAG+AGG + chr5.1:4227190-4227209 MS.gene015553:CDS 35.0%
CCTGAATCATTAAATGCAGA+AGG - chr5.1:4225732-4225751 None:intergenic 35.0%
CCTTCTGCATTTAATGATTC+AGG + chr5.1:4225729-4225748 MS.gene015553:intron 35.0%
CTCACTGAAAAAGAAGTCAT+CGG + chr5.1:4226663-4226682 MS.gene015553:CDS 35.0%
CTCTTTGAGCTACTCAAAAT+TGG + chr5.1:4227176-4227195 MS.gene015553:CDS 35.0%
CTTAACTGTGACGTTTGATT+TGG + chr5.1:4224995-4225014 MS.gene015553:intron 35.0%
CTTGATCCCGCTATAAAAAA+GGG + chr5.1:4226190-4226209 MS.gene015553:CDS 35.0%
GAGCTGAAGGATTTACAATT+TGG + chr5.1:4224583-4224602 MS.gene015553:CDS 35.0%
GCATTTCAACCAACACATAT+TGG - chr5.1:4225691-4225710 None:intergenic 35.0%
GCTCACTACTACCAAATATA+TGG + chr5.1:4226244-4226263 MS.gene015553:CDS 35.0%
GCTGAAGATCAAAGTTTAGT+TGG + chr5.1:4226769-4226788 MS.gene015553:CDS 35.0%
GGATATGCTTGCAACAAATA+TGG + chr5.1:4227041-4227060 MS.gene015553:CDS 35.0%
GGTCAATTTACCAAATGAGA+TGG + chr5.1:4226951-4226970 MS.gene015553:CDS 35.0%
GTAAATGGTCAGAAATTGCA+AGG + chr5.1:4226269-4226288 MS.gene015553:CDS 35.0%
GTAACTGTTTCCATCTCATT+TGG - chr5.1:4226964-4226983 None:intergenic 35.0%
GTTCATGTATTTATCTGCGA+AGG - chr5.1:4227013-4227032 None:intergenic 35.0%
TATTAGAGAAGAGCAGAAAC+TGG - chr5.1:4226725-4226744 None:intergenic 35.0%
TCGCAAATTAGCTCGAAAAA+CGG + chr5.1:4224910-4224929 MS.gene015553:CDS 35.0%
TCGCCATTTGGGAAAATTAT+AGG - chr5.1:4227103-4227122 None:intergenic 35.0%
TCTCTAATAAAACCAGCACA+TGG + chr5.1:4226736-4226755 MS.gene015553:CDS 35.0%
TCTGCATTTAATGATTCAGG+AGG + chr5.1:4225732-4225751 MS.gene015553:intron 35.0%
TGTATTTATCTGCGAAGGTA+GGG - chr5.1:4227008-4227027 None:intergenic 35.0%
TTTAATGATTCAGGAGGATG+AGG + chr5.1:4225738-4225757 MS.gene015553:intron 35.0%
TTTCTCCCAAACAAAGTAAC+TGG + chr5.1:4226797-4226816 MS.gene015553:CDS 35.0%
! AAGTAACAGTACTGGAAGAA+AGG - chr5.1:4227074-4227093 None:intergenic 35.0%
! ACAAGTGTCACTATTGCAAT+TGG - chr5.1:4224653-4224672 None:intergenic 35.0%
! AGGCCTATAATTTTCCCAAA+TGG + chr5.1:4227097-4227116 MS.gene015553:CDS 35.0%
! ATGGAATTTCTAGGAAGGAA+TGG - chr5.1:4227456-4227475 None:intergenic 35.0%
! ATTCCATGGAATTTCTAGGA+AGG - chr5.1:4227461-4227480 None:intergenic 35.0%
! CAAGTGTCACTATTGCAATT+GGG - chr5.1:4224652-4224671 None:intergenic 35.0%
! GAAAGTATGGTTTCAAGAGA+TGG + chr5.1:4225779-4225798 MS.gene015553:CDS 35.0%
! GCATCTTTTGAACACACTTT+TGG - chr5.1:4226442-4226461 None:intergenic 35.0%
! TAATTTTCCCAAATGGCGAA+AGG + chr5.1:4227104-4227123 MS.gene015553:CDS 35.0%
! TTTTATAGCATTGTCACTCC+TGG - chr5.1:4226629-4226648 None:intergenic 35.0%
! TTTTGAACACACTTTTGGTG+AGG - chr5.1:4226437-4226456 None:intergenic 35.0%
!! ATTCTGTAGGCTTTTTCTGT+TGG + chr5.1:4226002-4226021 MS.gene015553:intron 35.0%
!! CAATAGTGACACTTGTTTTC+TGG + chr5.1:4224657-4224676 MS.gene015553:CDS 35.0%
!! CAATTTTGAGTAGCTCAAAG+AGG - chr5.1:4227178-4227197 None:intergenic 35.0%
!! GTTGTGATAGCCATTTTAGA+AGG - chr5.1:4227375-4227394 None:intergenic 35.0%
!! TATAAAAAAGGGTGCTTGGA+CGG + chr5.1:4226201-4226220 MS.gene015553:CDS 35.0%
!! TGTGACGTTTGATTTGGTTA+AGG + chr5.1:4225001-4225020 MS.gene015553:intron 35.0%
!! TTGATTTGGTTAAGGCTCAA+GGG + chr5.1:4225009-4225028 MS.gene015553:intron 35.0%
!! TTTGATTTGGTTAAGGCTCA+AGG + chr5.1:4225008-4225027 MS.gene015553:intron 35.0%
!!! AGCCATTTTAGAAGGTGTTT+GGG - chr5.1:4227367-4227386 None:intergenic 35.0%
!!! GTCTTTGATTTTTTAGGGAG+AGG - chr5.1:4226502-4226521 None:intergenic 35.0%
!!! TAGCCATTTTAGAAGGTGTT+TGG - chr5.1:4227368-4227387 None:intergenic 35.0%
!!! TCTTCTTTCACTTTTTTCCG+AGG - chr5.1:4226929-4226948 None:intergenic 35.0%
AAGAAACTTACCCTGTAGCA+AGG - chr5.1:4224690-4224709 None:intergenic 40.0%
AAGAGAAACCTTTCGCCATT+TGG - chr5.1:4227115-4227134 None:intergenic 40.0%
ACATCCATGTCACATCTAGT+AGG - chr5.1:4226694-4226713 None:intergenic 40.0%
AGAAACTTACCCTGTAGCAA+GGG - chr5.1:4224689-4224708 None:intergenic 40.0%
AGAGAAACCTTTCGCCATTT+GGG - chr5.1:4227114-4227133 None:intergenic 40.0%
AGCATGTATTTATAGAGGGC+AGG - chr5.1:4226350-4226369 None:intergenic 40.0%
ATCACCTACTAGATGTGACA+TGG + chr5.1:4226687-4226706 MS.gene015553:CDS 40.0%
ATCAGACCGAAATTCCTCTA+CGG - chr5.1:4226875-4226894 None:intergenic 40.0%
ATCTCATGACTATGGCAAAC+AGG + chr5.1:4225178-4225197 MS.gene015553:intron 40.0%
ATGCTTCCGTAGAGGAATTT+CGG + chr5.1:4226866-4226885 MS.gene015553:CDS 40.0%
CAGAGCCTAATTTCAAGAGA+TGG + chr5.1:4225877-4225896 MS.gene015553:intron 40.0%
CAGTGAGTTTGCCAGTATTA+CGG + chr5.1:4224777-4224796 MS.gene015553:intron 40.0%
CATGAGAGGAAAGTTCAAGT+TGG + chr5.1:4227204-4227223 MS.gene015553:CDS 40.0%
CCAATTACACATCCTGCTTT+AGG - chr5.1:4227399-4227418 None:intergenic 40.0%
CCTAAAGCAGGATGTGTAAT+TGG + chr5.1:4227396-4227415 MS.gene015553:CDS 40.0%
CCTTGATCCCGCTATAAAAA+AGG + chr5.1:4226189-4226208 MS.gene015553:CDS 40.0%
GAAGGAATGGAACAAATCCT+TGG - chr5.1:4227443-4227462 None:intergenic 40.0%
GAGATAGTCAAGATGCATGA+TGG + chr5.1:4225215-4225234 MS.gene015553:CDS 40.0%
GAGGTTGTGACAGAACTAAT+AGG - chr5.1:4226483-4226502 None:intergenic 40.0%
GTATCAGATAAGTACCTTCC+AGG - chr5.1:4226301-4226320 None:intergenic 40.0%
GTCGTTTCGAAATGCATGTT+TGG + chr5.1:4224749-4224768 MS.gene015553:intron 40.0%
TACTAGGTGATCATTTCAGG+TGG + chr5.1:4226158-4226177 MS.gene015553:intron 40.0%
TATAAGTGCATTCCTGAAGC+AGG + chr5.1:4226559-4226578 MS.gene015553:intron 40.0%
TATTCGAAATGCTTCCGTAG+AGG + chr5.1:4226858-4226877 MS.gene015553:CDS 40.0%
TGAAGCAAGTCTCGATGATT+TGG - chr5.1:4224613-4224632 None:intergenic 40.0%
TGAATATATGTGCCTGCTTC+AGG - chr5.1:4226574-4226593 None:intergenic 40.0%
TGCTTCTCTCAACATTTCAG+TGG - chr5.1:4225388-4225407 None:intergenic 40.0%
TTAGCTCGAAAAACGGAATC+TGG + chr5.1:4224917-4224936 MS.gene015553:CDS 40.0%
TTGCTACAGGGTAAGTTTCT+TGG + chr5.1:4224689-4224708 MS.gene015553:intron 40.0%
TTGTATCATATGGGTAAGCC+AGG + chr5.1:4226608-4226627 MS.gene015553:intron 40.0%
TTTATTGCGAAATCCATGCC+AGG + chr5.1:4225805-4225824 MS.gene015553:CDS 40.0%
TTTGCCAGTATTACGGTTCA+CGG + chr5.1:4224784-4224803 MS.gene015553:intron 40.0%
! AGCATCTGGAAAAGTATAGG+TGG + chr5.1:4225239-4225258 MS.gene015553:CDS 40.0%
! GTCCCAAACACCTTCTAAAA+TGG + chr5.1:4227362-4227381 MS.gene015553:CDS 40.0%
! TGGAAAAGTATAGGTGGATG+CGG + chr5.1:4225245-4225264 MS.gene015553:CDS 40.0%
! TTCCAGTACTGTTACTTACG+AGG + chr5.1:4227077-4227096 MS.gene015553:CDS 40.0%
!! AAGTTTCTTAGCACCGATTC+TGG - chr5.1:4227261-4227280 None:intergenic 40.0%
!! AGTTTCTTAGCACCGATTCT+GGG - chr5.1:4227260-4227279 None:intergenic 40.0%
!! GAGGAAAGTTCAAGTTGGAA+TGG + chr5.1:4227209-4227228 MS.gene015553:CDS 40.0%
!! GGAAGCATCTGGAAAAGTAT+AGG + chr5.1:4225236-4225255 MS.gene015553:CDS 40.0%
!! TCATGCAGTGCTGACAAATA+TGG + chr5.1:4227336-4227355 MS.gene015553:CDS 40.0%
!! TGTGTTGGTTGAAATGCTGA+TGG + chr5.1:4225694-4225713 MS.gene015553:intron 40.0%
!!! CAAGCACCCTTTTTTATAGC+GGG - chr5.1:4226199-4226218 None:intergenic 40.0%
!!! CCAAGCACCCTTTTTTATAG+CGG - chr5.1:4226200-4226219 None:intergenic 40.0%
!!! CCTTTTTTATAGCGGGATCA+AGG - chr5.1:4226192-4226211 None:intergenic 40.0%
AAAGCAATGTCGAGAGAGGT+AGG + chr5.1:4225837-4225856 MS.gene015553:intron 45.0%
AAATCCATGCCAGGTCGTAT+CGG + chr5.1:4225814-4225833 MS.gene015553:CDS 45.0%
ACATTGAATGCTTCCATCGC+TGG + chr5.1:4225574-4225593 MS.gene015553:CDS 45.0%
AGAAGAGCAGAAACTGGAAG+TGG - chr5.1:4226719-4226738 None:intergenic 45.0%
ATTCAATGTCTGTTCGCCCA+GGG - chr5.1:4225563-4225582 None:intergenic 45.0%
GAAATTGCAAGGGTTCTTCC+TGG + chr5.1:4226280-4226299 MS.gene015553:CDS 45.0%
GCTATCACAACTCCTAAAGC+AGG + chr5.1:4227384-4227403 MS.gene015553:CDS 45.0%
GGAAATGGAAAAGGAGCTGA+AGG + chr5.1:4224570-4224589 MS.gene015553:CDS 45.0%
TGGAATCATCCCTTGCTACA+GGG + chr5.1:4224677-4224696 MS.gene015553:CDS 45.0%
TTACAGCTGCATACTTCCCT+GGG + chr5.1:4225544-4225563 MS.gene015553:intron 45.0%
TTTACAGCTGCATACTTCCC+TGG + chr5.1:4225543-4225562 MS.gene015553:intron 45.0%
TTTATCTGCGAAGGTAGGGT+TGG - chr5.1:4227004-4227023 None:intergenic 45.0%
!! AGATGCATGATGGAAGCATC+TGG + chr5.1:4225225-4225244 MS.gene015553:CDS 45.0%
!! AGGGTAAGTTTCTTGGTGCT+TGG + chr5.1:4224696-4224715 MS.gene015553:intron 45.0%
!! CCGCTATAAAAAAGGGTGCT+TGG + chr5.1:4226197-4226216 MS.gene015553:CDS 45.0%
!! GGGTAAGTTTCTTGGTGCTT+GGG + chr5.1:4224697-4224716 MS.gene015553:intron 45.0%
AAGCAACGTGAGCCCAGAAT+CGG + chr5.1:4227245-4227264 MS.gene015553:CDS 50.0%
ATGCTTCCATCGCTGGCAAA+AGG + chr5.1:4225581-4225600 MS.gene015553:CDS 50.0%
CATTCAATGTCTGTTCGCCC+AGG - chr5.1:4225564-4225583 None:intergenic 50.0%
CATTGCTTTCCGATACGACC+TGG - chr5.1:4225826-4225845 None:intergenic 50.0%
CGGAATCTGGACAGAAGAAG+AGG + chr5.1:4224930-4224949 MS.gene015553:CDS 50.0%
CTGGAATCATCCCTTGCTAC+AGG + chr5.1:4224676-4224695 MS.gene015553:CDS 50.0%
GCTTTAACCGAACCATGTGC+TGG - chr5.1:4226751-4226770 None:intergenic 50.0%
GGCCTCGTAAGTAACAGTAC+TGG - chr5.1:4227082-4227101 None:intergenic 50.0%
TCAGCACTGCATGACTTCCT+AGG - chr5.1:4227330-4227349 None:intergenic 50.0%
TCGGAAAGCAATGTCGAGAG+AGG + chr5.1:4225833-4225852 MS.gene015553:CDS 50.0%
TTGCAAGGGTTCTTCCTGGA+AGG + chr5.1:4226284-4226303 MS.gene015553:CDS 50.0%
! TCGAAACCTTTTGCCAGCGA+TGG - chr5.1:4225590-4225609 None:intergenic 50.0%
!! AAAAAAGGGTGCTTGGACGG+AGG + chr5.1:4226204-4226223 MS.gene015553:CDS 50.0%
!!! TCACTTTTTTCCGAGGCCCT+AGG - chr5.1:4226922-4226941 None:intergenic 50.0%
ACGGTGGCTCACTGTGAATC+AGG + chr5.1:4224803-4224822 MS.gene015553:intron 55.0%
CTTTCCGATACGACCTGGCA+TGG - chr5.1:4225821-4225840 None:intergenic 55.0%
GCCACCGTGAACCGTAATAC+TGG - chr5.1:4224791-4224810 None:intergenic 55.0%
GCCAGTATTACGGTTCACGG+TGG + chr5.1:4224787-4224806 MS.gene015553:intron 55.0%
! TTTTGGCGTGGCAGCTCCTA+GGG + chr5.1:4226903-4226922 MS.gene015553:CDS 55.0%
!! TTTTTGGCGTGGCAGCTCCT+AGG + chr5.1:4226902-4226921 MS.gene015553:CDS 55.0%
! CTGCGAAGGTAGGGTTGGCA+TGG - chr5.1:4226999-4227018 None:intergenic 60.0%
!! AAAGGGTGCTTGGACGGAGG+AGG + chr5.1:4226207-4226226 MS.gene015553:CDS 60.0%
CGTGGCAGCTCCTAGGGCCT+CGG + chr5.1:4226909-4226928 MS.gene015553:CDS 70.0%
GGGTGCTTGGACGGAGGAGG+AGG + chr5.1:4226210-4226229 MS.gene015553:CDS 70.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 4224565 4227482 4224565 ID=MS.gene015553
chr5.1 mRNA 4224565 4227482 4224565 ID=MS.gene015553.t1;Parent=MS.gene015553
chr5.1 exon 4224565 4224698 4224565 ID=MS.gene015553.t1.exon1;Parent=MS.gene015553.t1
chr5.1 CDS 4224565 4224698 4224565 ID=cds.MS.gene015553.t1;Parent=MS.gene015553.t1
chr5.1 exon 4224900 4224951 4224900 ID=MS.gene015553.t1.exon2;Parent=MS.gene015553.t1
chr5.1 CDS 4224900 4224951 4224900 ID=cds.MS.gene015553.t1;Parent=MS.gene015553.t1
chr5.1 exon 4225200 4225266 4225200 ID=MS.gene015553.t1.exon3;Parent=MS.gene015553.t1
chr5.1 CDS 4225200 4225266 4225200 ID=cds.MS.gene015553.t1;Parent=MS.gene015553.t1
chr5.1 exon 4225550 4225644 4225550 ID=MS.gene015553.t1.exon4;Parent=MS.gene015553.t1
chr5.1 CDS 4225550 4225644 4225550 ID=cds.MS.gene015553.t1;Parent=MS.gene015553.t1
chr5.1 exon 4225751 4225854 4225751 ID=MS.gene015553.t1.exon5;Parent=MS.gene015553.t1
chr5.1 CDS 4225751 4225854 4225751 ID=cds.MS.gene015553.t1;Parent=MS.gene015553.t1
chr5.1 exon 4226177 4226305 4226177 ID=MS.gene015553.t1.exon6;Parent=MS.gene015553.t1
chr5.1 CDS 4226177 4226305 4226177 ID=cds.MS.gene015553.t1;Parent=MS.gene015553.t1
chr5.1 exon 4226630 4227482 4226630 ID=MS.gene015553.t1.exon7;Parent=MS.gene015553.t1
chr5.1 CDS 4226630 4227482 4226630 ID=cds.MS.gene015553.t1;Parent=MS.gene015553.t1
Gene Sequence

>MS.gene015553

ATGTTGGAAATGGAAAAGGAGCTGAAGGATTTACAATTTGGTTCACCAAATCATCGAGACTTGCTTCATTTATGTCTCTCTTCACCCAATTGCAATAGTGACACTTGTTTTCTGGAATCATCCCTTGCTACAGGGTAAGTTTCTTGGTGCTTGGGACTTTTAAAGTGAAGTCAATTTTTTAAAGGTCGTTTCGAAATGCATGTTTGGTATCACAGTGAGTTTGCCAGTATTACGGTTCACGGTGGCTCACTGTGAATCAGGAAGACTCATCAGTGATACCAAATGTAGTTTGTTGCATTATTGCTTTAATAATTTTCACAATTTTTGTTTGATAGGAAAATAAAATCGCAAATTAGCTCGAAAAACGGAATCTGGACAGAAGAAGAGGTATGTACGTTGCTTTAATTTAAAATCATTAGTAATATAGTTTCTTAACTGTGACGTTTGATTTGGTTAAGGCTCAAGGGCTATTGAAATATTTGTTGTACAAATTTTAACTATTATTGGAAGTTGCAATTTTTGTTCTTATACTCTTTTTTTGTCTTTGTTATCCTTTTGTGGTATTTATTATGTTAGGTTGCAATTTACAGTGTTAATGCTCTCTGATTTTGCAATCTCATGACTATGGCAAACAGGATAATCTTTTGATTGAGATAGTCAAGATGCATGATGGAAGCATCTGGAAAAGTATAGGTGGATGCGGTAATATATCAGTATATTTATCAATTTGAATTGAACTATTAGTTTATAATTACTCTTTTTTTTTTTTTTTCGTTCGCTAAATTAACATAATGAGTTTAACTGCATTTTGGGTTTTACTCCACTGAAATGTTGAGAGAAGCAAGTGTTTGTTCCTCATGATAAAATATAGCATAAGTAGATACTGTTTGTGACATTATTTGTCATCATTGTAGATTTTTACTATATGTATTTTTATCTCGTTTATAACTCAAACTAATCTGGTTGTTCAATTGGTCTTTTACAGCTGCATACTTCCCTGGGCGAACAGACATTGAATGCTTCCATCGCTGGCAAAAGGTTTCGAATCATGATCTTGTAAAAAGATCATGGACAAAGGAGGTGCTCTTTTAGTGTAAACACTTGTTATAATTTTTTTATTGTGCCAATATGTGTTGGTTGAAATGCTGATGGTGATTGTTGTCTCCTTCTGCATTTAATGATTCAGGAGGATGAGGCCTTAATTGAGCTAGTAAGAAAGTATGGTTTCAAGAGATGGTCTTTTATTGCGAAATCCATGCCAGGTCGTATCGGAAAGCAATGTCGAGAGAGGTAGGCAGTTATAAATGTTAGTCAGAGCCTAATTTCAAGAGATGGAAGTATACTGTGAATTTGTGTTTTATTCTTAGATGTATTGCTATGATGCTATTCCTTTGAAAATGACAACTTTTGTGTGCAATTTTATCATTCATAAATAATATTCTGTAGGCTTTTTCTGTTGGATTTCTATGCTTTGAATCAGATTGGTCATCTTCATTCATATGTTTCTAAGTATCAAATCATCGATATTATATTTTGCAGATCACTATATTCCATATGTATGTTTCTTAAAAAGTATGTTGTCAGAATATGAACTACTAGGTGATCATTTCAGGTGGCATAATAACCTTGATCCCGCTATAAAAAAGGGTGCTTGGACGGAGGAGGAGGAGTCAATACTTGCTCACTACTACCAAATATATGGCAGTAAATGGTCAGAAATTGCAAGGGTTCTTCCTGGAAGGTACTTATCTGATACTGTTGTCTGTTATGCAGAATTTTCAACCTGCCCTCTATAAATACATGCTTCAAAACCTGCATAAATATCAATAAAATGATAACTTACTCGAAAGTGATTTTTTTGAGGATATACCTCACCAAAAGTGTGTTCAAAAGATGCGTTAGTTTTTCTCAGCAACCTATTAGTTCTGTCACAACCTCTCCCTAAAAAATCAAAGACAGAAAATTAGAACAATTATACTTGAGCTATTGATAAATATAAGTGCATTCCTGAAGCAGGCACATATATTCATAATATCTAATTCGTTGTATCATATGGGTAAGCCAGGAGTGACAATGCTATAAAAAATCATTGGAACAGCTCACTGAAAAAGAAGTCATCGGCATCACCTACTAGATGTGACATGGATGTTTCCACTTCCAGTTTCTGCTCTTCTCTAATAAAACCAGCACATGGTTCGGTTAAAGCTGAAGATCAAAGTTTAGTTGGAATAGTTTCTCCCAAACAAAGTAACTGGTTGAATCACAATGCTGATAGCTTCCCAACTAGAGTGTTTATTCGAAATGCTTCCGTAGAGGAATTTCGGTCTGATAAAAACATTTTTGGCGTGGCAGCTCCTAGGGCCTCGGAAAAAAGTGAAAGAAGATTGGTCAATTTACCAAATGAGATGGAAACAGTTACATGCTTCAAAGACCATGCCAACCCTACCTTCGCAGATAAATACATGAACTCATCGTTGGATATGCTTGCAACAAATATGGATTGTTTCCTTTCTTCCAGTACTGTTACTTACGAGGCCTATAATTTTCCCAAATGGCGAAAGGTTTCTCTTACAGATTCAAAGTTTATTGCTGGTAATGAATCTGATAGTTCCTCTTTGAGCTACTCAAAATTGGCTAATCATGAGAGGAAAGTTCAAGTTGGAATGGAAAGCAATAACAAAAGCAACGTGAGCCCAGAATCGGTGCTAAGAAACTTAGCAATGACCTATGAGAACATTCCTTCTATTATAAGGAAAAGATCTCCTAGGAAGTCATGCAGTGCTGACAAATATGGCAAGTCCCAAACACCTTCTAAAATGGCTATCACAACTCCTAAAGCAGGATGTGTAATTGGTTTCGATAATTTAAAACTCAACCAAGGATTTGTTCCATTCCTTCCTAGAAATTCCATGGAATGA
Protein sequence

>MS.gene015553.t1

MLEMEKELKDLQFGSPNHRDLLHLCLSSPNCNSDTCFLESSLATGKIKSQISSKNGIWTEEEDNLLIEIVKMHDGSIWKSIGGCAAYFPGRTDIECFHRWQKVSNHDLVKRSWTKEEDEALIELVRKYGFKRWSFIAKSMPGRIGKQCRERWHNNLDPAIKKGAWTEEEESILAHYYQIYGSKWSEIARVLPGRSDNAIKNHWNSSLKKKSSASPTRCDMDVSTSSFCSSLIKPAHGSVKAEDQSLVGIVSPKQSNWLNHNADSFPTRVFIRNASVEEFRSDKNIFGVAAPRASEKSERRLVNLPNEMETVTCFKDHANPTFADKYMNSSLDMLATNMDCFLSSSTVTYEAYNFPKWRKVSLTDSKFIAGNESDSSSLSYSKLANHERKVQVGMESNNKSNVSPESVLRNLAMTYENIPSIIRKRSPRKSCSADKYGKSQTPSKMAITTPKAGCVIGFDNLKLNQGFVPFLPRNSME