Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene01570.t1 | XP_024631505.1 | 84.3 | 381 | 53 | 1 | 1 | 381 | 1 | 374 | 3.40E-162 | 581.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene01570.t1 | Q700D9 | 61.4 | 83 | 32 | 0 | 76 | 158 | 3 | 85 | 2.9e-21 | 104.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene01570.t1 | A0A072V3K0 | 84.3 | 381 | 53 | 1 | 1 | 381 | 1 | 374 | 2.4e-162 | 581.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene01570.t1 | TF | GARP-G2-like |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene01570.t1 | MTR_2g016220 | 86.719 | 384 | 38 | 3 | 1 | 381 | 1 | 374 | 0.0 | 667 |
MS.gene01570.t1 | MTR_2g016220 | 85.825 | 388 | 38 | 4 | 1 | 381 | 1 | 378 | 0.0 | 661 |
MS.gene01570.t1 | MTR_2g016220 | 86.508 | 378 | 38 | 3 | 1 | 375 | 1 | 368 | 0.0 | 656 |
MS.gene01570.t1 | MTR_8g086410 | 44.811 | 424 | 147 | 11 | 25 | 381 | 25 | 428 | 1.90e-92 | 284 |
MS.gene01570.t1 | MTR_8g086410 | 44.811 | 424 | 147 | 11 | 25 | 381 | 23 | 426 | 2.06e-92 | 284 |
MS.gene01570.t1 | MTR_8g086410 | 44.084 | 431 | 147 | 12 | 25 | 381 | 25 | 435 | 1.53e-89 | 276 |
MS.gene01570.t1 | MTR_2g084230 | 53.107 | 177 | 67 | 5 | 34 | 197 | 35 | 208 | 6.17e-46 | 160 |
MS.gene01570.t1 | MTR_2g084230 | 53.107 | 177 | 67 | 5 | 34 | 197 | 35 | 208 | 2.43e-45 | 160 |
MS.gene01570.t1 | MTR_7g069660 | 62.385 | 109 | 41 | 0 | 52 | 160 | 27 | 135 | 4.74e-36 | 135 |
MS.gene01570.t1 | MTR_0223s0040 | 63.095 | 84 | 26 | 1 | 84 | 167 | 6 | 84 | 1.63e-29 | 115 |
MS.gene01570.t1 | MTR_2g023580 | 72.464 | 69 | 19 | 0 | 88 | 156 | 47 | 115 | 4.60e-29 | 113 |
MS.gene01570.t1 | MTR_1g112370 | 64.198 | 81 | 25 | 2 | 78 | 158 | 7 | 83 | 4.52e-28 | 112 |
MS.gene01570.t1 | MTR_3g450310 | 55.405 | 74 | 33 | 0 | 79 | 152 | 2 | 75 | 1.01e-22 | 95.5 |
MS.gene01570.t1 | MTR_1g021520 | 57.500 | 80 | 29 | 2 | 88 | 164 | 120 | 197 | 1.76e-19 | 88.2 |
MS.gene01570.t1 | MTR_1g080330 | 56.579 | 76 | 32 | 1 | 77 | 152 | 157 | 231 | 2.47e-19 | 87.4 |
MS.gene01570.t1 | MTR_1g080330 | 56.579 | 76 | 32 | 1 | 77 | 152 | 157 | 231 | 3.67e-19 | 88.6 |
MS.gene01570.t1 | MTR_7g098250 | 67.857 | 56 | 18 | 0 | 97 | 152 | 263 | 318 | 3.85e-19 | 89.4 |
MS.gene01570.t1 | MTR_6g071625 | 65.517 | 58 | 20 | 0 | 95 | 152 | 201 | 258 | 5.02e-19 | 87.8 |
MS.gene01570.t1 | MTR_7g115530 | 66.071 | 56 | 19 | 0 | 97 | 152 | 219 | 274 | 5.81e-19 | 86.7 |
MS.gene01570.t1 | MTR_7g115530 | 66.071 | 56 | 19 | 0 | 97 | 152 | 219 | 274 | 1.16e-18 | 86.3 |
MS.gene01570.t1 | MTR_7g115530 | 66.071 | 56 | 19 | 0 | 97 | 152 | 219 | 274 | 1.42e-18 | 87.4 |
MS.gene01570.t1 | MTR_7g115530 | 66.071 | 56 | 19 | 0 | 97 | 152 | 219 | 274 | 2.02e-18 | 85.9 |
MS.gene01570.t1 | MTR_8g066310 | 50.602 | 83 | 32 | 1 | 95 | 177 | 172 | 245 | 2.44e-18 | 85.9 |
MS.gene01570.t1 | MTR_5g029470 | 58.571 | 70 | 28 | 1 | 95 | 163 | 218 | 287 | 2.67e-18 | 86.3 |
MS.gene01570.t1 | MTR_3g064840 | 65.517 | 58 | 20 | 0 | 95 | 152 | 273 | 330 | 4.59e-18 | 85.9 |
MS.gene01570.t1 | MTR_7g115530 | 64.286 | 56 | 20 | 0 | 97 | 152 | 219 | 274 | 4.33e-17 | 80.9 |
MS.gene01570.t1 | MTR_7g115530 | 67.308 | 52 | 17 | 0 | 97 | 148 | 219 | 270 | 5.30e-17 | 80.9 |
MS.gene01570.t1 | MTR_7g093030 | 54.839 | 62 | 28 | 0 | 92 | 153 | 208 | 269 | 1.41e-16 | 79.7 |
MS.gene01570.t1 | MTR_7g093030 | 54.839 | 62 | 28 | 0 | 92 | 153 | 208 | 269 | 2.86e-16 | 80.1 |
MS.gene01570.t1 | MTR_6g032990 | 60.377 | 53 | 21 | 0 | 97 | 149 | 43 | 95 | 4.90e-16 | 79.3 |
MS.gene01570.t1 | MTR_5g027440 | 49.315 | 73 | 37 | 0 | 77 | 149 | 6 | 78 | 6.66e-16 | 77.8 |
MS.gene01570.t1 | MTR_1g053835 | 51.250 | 80 | 35 | 2 | 73 | 152 | 239 | 314 | 7.39e-16 | 79.0 |
MS.gene01570.t1 | MTR_5g041350 | 50.769 | 65 | 30 | 1 | 90 | 152 | 7 | 71 | 9.57e-16 | 78.2 |
MS.gene01570.t1 | MTR_2g086450 | 57.143 | 56 | 24 | 0 | 97 | 152 | 46 | 101 | 1.16e-15 | 78.2 |
MS.gene01570.t1 | MTR_2g027860 | 65.455 | 55 | 19 | 0 | 98 | 152 | 51 | 105 | 2.36e-15 | 76.6 |
MS.gene01570.t1 | MTR_7g088070 | 61.818 | 55 | 21 | 0 | 98 | 152 | 52 | 106 | 3.18e-15 | 75.5 |
MS.gene01570.t1 | MTR_7g088070 | 61.818 | 55 | 21 | 0 | 98 | 152 | 52 | 106 | 3.29e-15 | 75.5 |
MS.gene01570.t1 | MTR_1g053830 | 54.545 | 55 | 25 | 0 | 98 | 152 | 20 | 74 | 4.40e-15 | 70.9 |
MS.gene01570.t1 | MTR_1g090670 | 57.143 | 56 | 24 | 0 | 97 | 152 | 45 | 100 | 1.56e-14 | 73.9 |
MS.gene01570.t1 | MTR_2g027800 | 57.143 | 56 | 24 | 0 | 97 | 152 | 40 | 95 | 1.98e-14 | 73.9 |
MS.gene01570.t1 | MTR_2g027800 | 58.491 | 53 | 22 | 0 | 97 | 149 | 40 | 92 | 3.36e-14 | 72.8 |
MS.gene01570.t1 | MTR_6g444980 | 55.357 | 56 | 25 | 0 | 97 | 152 | 36 | 91 | 3.56e-14 | 73.6 |
MS.gene01570.t1 | MTR_6g444980 | 55.357 | 56 | 25 | 0 | 97 | 152 | 36 | 91 | 3.87e-14 | 73.2 |
MS.gene01570.t1 | MTR_1g053800 | 60.377 | 53 | 21 | 0 | 98 | 150 | 179 | 231 | 4.70e-14 | 72.8 |
MS.gene01570.t1 | MTR_4g021790 | 39.796 | 98 | 54 | 3 | 52 | 149 | 128 | 220 | 5.63e-14 | 72.0 |
MS.gene01570.t1 | MTR_4g081710 | 53.571 | 56 | 26 | 0 | 97 | 152 | 18 | 73 | 7.01e-14 | 72.4 |
MS.gene01570.t1 | MTR_7g068600 | 59.322 | 59 | 21 | 1 | 98 | 153 | 15 | 73 | 7.54e-14 | 70.9 |
MS.gene01570.t1 | MTR_4g021855 | 45.946 | 74 | 34 | 2 | 76 | 149 | 153 | 220 | 1.28e-12 | 68.2 |
MS.gene01570.t1 | MTR_7g093010 | 56.604 | 53 | 23 | 0 | 98 | 150 | 215 | 267 | 1.14e-11 | 65.9 |
MS.gene01570.t1 | MTR_2g450070 | 52.727 | 55 | 25 | 1 | 95 | 149 | 212 | 265 | 3.58e-11 | 65.1 |
MS.gene01570.t1 | MTR_2g450070 | 52.727 | 55 | 25 | 1 | 95 | 149 | 212 | 265 | 3.72e-11 | 65.1 |
MS.gene01570.t1 | MTR_4g121020 | 54.545 | 55 | 24 | 1 | 95 | 149 | 110 | 163 | 6.39e-11 | 64.3 |
MS.gene01570.t1 | MTR_4g121020 | 54.545 | 55 | 24 | 1 | 95 | 149 | 214 | 267 | 6.64e-11 | 64.3 |
MS.gene01570.t1 | MTR_4g121020 | 54.545 | 55 | 24 | 1 | 95 | 149 | 214 | 267 | 6.75e-11 | 64.3 |
MS.gene01570.t1 | MTR_1g032570 | 33.898 | 118 | 49 | 3 | 60 | 149 | 67 | 183 | 7.88e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene01570.t1 | AT2G38300 | 68.750 | 80 | 25 | 0 | 82 | 161 | 40 | 119 | 7.82e-33 | 126 |
MS.gene01570.t1 | AT2G40260 | 77.333 | 75 | 17 | 0 | 81 | 155 | 67 | 141 | 8.21e-31 | 122 |
MS.gene01570.t1 | AT4G04605 | 62.353 | 85 | 32 | 0 | 88 | 172 | 6 | 90 | 4.21e-29 | 112 |
MS.gene01570.t1 | AT2G42660 | 51.240 | 121 | 33 | 1 | 34 | 154 | 14 | 108 | 6.37e-29 | 113 |
MS.gene01570.t1 | AT1G14600 | 61.446 | 83 | 32 | 0 | 76 | 158 | 3 | 85 | 1.60e-28 | 112 |
MS.gene01570.t1 | AT2G02060 | 61.728 | 81 | 27 | 1 | 73 | 149 | 2 | 82 | 3.86e-26 | 105 |
MS.gene01570.t1 | AT2G02060 | 61.728 | 81 | 27 | 1 | 73 | 149 | 2 | 82 | 3.86e-26 | 105 |
MS.gene01570.t1 | AT4G04580 | 50.617 | 81 | 40 | 0 | 88 | 168 | 6 | 86 | 3.31e-20 | 87.0 |
MS.gene01570.t1 | AT5G42630 | 63.492 | 63 | 23 | 0 | 95 | 157 | 104 | 166 | 1.82e-19 | 86.7 |
MS.gene01570.t1 | AT4G04555 | 56.944 | 72 | 30 | 1 | 85 | 155 | 2 | 73 | 1.96e-19 | 83.2 |
MS.gene01570.t1 | AT5G42630 | 63.492 | 63 | 23 | 0 | 95 | 157 | 104 | 166 | 1.97e-19 | 87.8 |
MS.gene01570.t1 | AT1G32240 | 65.517 | 58 | 20 | 0 | 95 | 152 | 212 | 269 | 3.13e-18 | 85.5 |
MS.gene01570.t1 | AT4G17695 | 57.534 | 73 | 26 | 1 | 95 | 162 | 163 | 235 | 3.30e-18 | 85.1 |
MS.gene01570.t1 | AT1G32240 | 65.517 | 58 | 20 | 0 | 95 | 152 | 212 | 269 | 3.95e-18 | 85.5 |
MS.gene01570.t1 | AT5G16560 | 65.517 | 58 | 20 | 0 | 95 | 152 | 218 | 275 | 4.17e-18 | 85.5 |
MS.gene01570.t1 | AT4G28610 | 65.455 | 55 | 19 | 0 | 98 | 152 | 227 | 281 | 1.68e-17 | 84.0 |
MS.gene01570.t1 | AT3G04450 | 61.818 | 55 | 21 | 0 | 98 | 152 | 240 | 294 | 2.65e-17 | 82.4 |
MS.gene01570.t1 | AT5G29000 | 65.455 | 55 | 19 | 0 | 98 | 152 | 190 | 244 | 2.70e-17 | 82.8 |
MS.gene01570.t1 | AT5G29000 | 65.455 | 55 | 19 | 0 | 98 | 152 | 190 | 244 | 2.70e-17 | 82.8 |
MS.gene01570.t1 | AT3G04450 | 61.818 | 55 | 21 | 0 | 98 | 152 | 200 | 254 | 3.12e-17 | 83.2 |
MS.gene01570.t1 | AT3G04450 | 61.818 | 55 | 21 | 0 | 98 | 152 | 200 | 254 | 3.12e-17 | 83.2 |
MS.gene01570.t1 | AT5G29000 | 60.656 | 61 | 24 | 0 | 92 | 152 | 227 | 287 | 3.30e-17 | 82.0 |
MS.gene01570.t1 | AT3G04450 | 61.818 | 55 | 21 | 0 | 98 | 152 | 240 | 294 | 3.44e-17 | 83.2 |
MS.gene01570.t1 | AT5G29000 | 60.656 | 61 | 24 | 0 | 92 | 152 | 227 | 287 | 3.88e-17 | 82.8 |
MS.gene01570.t1 | AT3G13040 | 67.273 | 55 | 18 | 0 | 98 | 152 | 243 | 297 | 2.44e-16 | 80.5 |
MS.gene01570.t1 | AT3G13040 | 67.273 | 55 | 18 | 0 | 98 | 152 | 243 | 297 | 2.44e-16 | 80.5 |
MS.gene01570.t1 | AT3G13040 | 67.273 | 55 | 18 | 0 | 98 | 152 | 243 | 297 | 2.44e-16 | 80.5 |
MS.gene01570.t1 | AT5G45580 | 56.897 | 58 | 25 | 0 | 92 | 149 | 3 | 60 | 3.15e-16 | 78.6 |
MS.gene01570.t1 | AT5G45580 | 56.897 | 58 | 25 | 0 | 92 | 149 | 19 | 76 | 4.23e-16 | 78.2 |
MS.gene01570.t1 | AT2G01060 | 65.455 | 55 | 19 | 0 | 98 | 152 | 17 | 71 | 1.20e-15 | 77.0 |
MS.gene01570.t1 | AT3G12730 | 38.739 | 111 | 59 | 3 | 97 | 203 | 24 | 129 | 1.31e-15 | 75.9 |
MS.gene01570.t1 | AT1G79430 | 40.777 | 103 | 51 | 3 | 97 | 197 | 35 | 129 | 1.47e-15 | 77.8 |
MS.gene01570.t1 | AT2G06020 | 32.609 | 184 | 109 | 6 | 51 | 220 | 39 | 221 | 1.99e-15 | 76.6 |
MS.gene01570.t1 | AT3G04030 | 53.571 | 56 | 26 | 0 | 97 | 152 | 46 | 101 | 2.20e-15 | 77.4 |
MS.gene01570.t1 | AT3G04030 | 53.571 | 56 | 26 | 0 | 97 | 152 | 46 | 101 | 2.54e-15 | 77.4 |
MS.gene01570.t1 | AT2G20400 | 63.636 | 55 | 20 | 0 | 98 | 152 | 233 | 287 | 4.89e-15 | 76.3 |
MS.gene01570.t1 | AT2G20400 | 63.636 | 55 | 20 | 0 | 98 | 152 | 233 | 287 | 5.01e-15 | 76.3 |
MS.gene01570.t1 | AT5G18240 | 53.571 | 56 | 26 | 0 | 97 | 152 | 46 | 101 | 6.81e-15 | 75.9 |
MS.gene01570.t1 | AT5G18240 | 53.571 | 56 | 26 | 0 | 97 | 152 | 46 | 101 | 6.81e-15 | 75.9 |
MS.gene01570.t1 | AT5G18240 | 53.571 | 56 | 26 | 0 | 97 | 152 | 46 | 101 | 7.82e-15 | 75.9 |
MS.gene01570.t1 | AT5G18240 | 53.571 | 56 | 26 | 0 | 97 | 152 | 46 | 101 | 7.82e-15 | 75.9 |
MS.gene01570.t1 | AT5G18240 | 53.571 | 56 | 26 | 0 | 97 | 152 | 46 | 101 | 7.82e-15 | 75.9 |
MS.gene01570.t1 | AT4G13640 | 56.604 | 53 | 23 | 0 | 97 | 149 | 38 | 90 | 1.39e-14 | 73.9 |
MS.gene01570.t1 | AT4G13640 | 56.604 | 53 | 23 | 0 | 97 | 149 | 38 | 90 | 1.44e-14 | 73.9 |
MS.gene01570.t1 | AT3G24120 | 56.604 | 53 | 23 | 0 | 97 | 149 | 42 | 94 | 1.62e-14 | 73.9 |
MS.gene01570.t1 | AT3G24120 | 56.604 | 53 | 23 | 0 | 97 | 149 | 42 | 94 | 1.64e-14 | 73.9 |
MS.gene01570.t1 | AT5G06800 | 56.364 | 55 | 24 | 0 | 98 | 152 | 194 | 248 | 2.97e-14 | 72.8 |
MS.gene01570.t1 | AT1G69580 | 51.667 | 60 | 29 | 0 | 97 | 156 | 35 | 94 | 5.80e-14 | 72.8 |
MS.gene01570.t1 | AT1G69580 | 51.667 | 60 | 29 | 0 | 97 | 156 | 35 | 94 | 6.35e-14 | 72.8 |
MS.gene01570.t1 | AT5G06800 | 50.769 | 65 | 31 | 1 | 98 | 161 | 194 | 258 | 7.35e-14 | 72.8 |
MS.gene01570.t1 | AT5G06800 | 56.364 | 55 | 24 | 0 | 98 | 152 | 194 | 248 | 9.26e-14 | 72.4 |
MS.gene01570.t1 | AT3G04030 | 51.786 | 56 | 26 | 1 | 97 | 152 | 46 | 100 | 6.31e-13 | 70.1 |
MS.gene01570.t1 | AT3G62670 | 53.333 | 60 | 24 | 1 | 94 | 149 | 209 | 268 | 2.10e-12 | 68.6 |
MS.gene01570.t1 | AT5G59570 | 55.357 | 56 | 24 | 1 | 94 | 149 | 139 | 193 | 8.36e-12 | 65.9 |
MS.gene01570.t1 | AT5G59570 | 55.357 | 56 | 24 | 1 | 94 | 149 | 139 | 193 | 8.36e-12 | 65.9 |
MS.gene01570.t1 | AT3G46640 | 54.545 | 55 | 24 | 1 | 95 | 149 | 143 | 196 | 4.53e-11 | 63.9 |
MS.gene01570.t1 | AT3G46640 | 54.545 | 55 | 24 | 1 | 95 | 149 | 143 | 196 | 4.53e-11 | 63.9 |
MS.gene01570.t1 | AT4G37180 | 51.667 | 60 | 29 | 0 | 90 | 149 | 204 | 263 | 4.64e-11 | 63.9 |
MS.gene01570.t1 | AT1G25550 | 38.596 | 114 | 57 | 2 | 98 | 211 | 211 | 311 | 4.71e-11 | 63.9 |
MS.gene01570.t1 | AT3G16857 | 39.796 | 98 | 55 | 2 | 55 | 149 | 123 | 219 | 4.85e-11 | 64.7 |
MS.gene01570.t1 | AT4G37180 | 51.667 | 60 | 29 | 0 | 90 | 149 | 211 | 270 | 5.39e-11 | 63.9 |
MS.gene01570.t1 | AT3G46640 | 54.545 | 55 | 24 | 1 | 95 | 149 | 143 | 196 | 5.53e-11 | 63.5 |
MS.gene01570.t1 | AT3G16857 | 39.796 | 98 | 55 | 2 | 55 | 149 | 193 | 289 | 7.18e-11 | 64.3 |
MS.gene01570.t1 | AT3G16857 | 39.796 | 98 | 55 | 2 | 55 | 149 | 193 | 289 | 8.09e-11 | 64.3 |
Find 67 sgRNAs with CRISPR-Local
Find 194 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTCAAGTATTGTTGCTTCA+TGG | 0.216171 | 2.2:-67390067 | None:intergenic |
AGCAAGAAACTTGACGAGTT+TGG | 0.326402 | 2.2:+67390803 | MS.gene01570:CDS |
CTTGTGTTGACCTCTGTGTT+TGG | 0.327855 | 2.2:-67392373 | None:intergenic |
ATGATCAATCTTACCATCAT+TGG | 0.345938 | 2.2:-67393618 | None:intergenic |
CTCAAACCTAGTTGCAAATC+AGG | 0.351771 | 2.2:-67393581 | None:intergenic |
TTCCATTCAACTTTCTCAAT+AGG | 0.352795 | 2.2:-67393300 | None:intergenic |
AGAAGGAAGGGCATGGCTGC+AGG | 0.377318 | 2.2:-67392514 | None:intergenic |
GATGAAAGTAATACTTCATC+TGG | 0.379913 | 2.2:+67389990 | MS.gene01570:CDS |
TCATGTCAAGTCTCACTTGC+AGG | 0.383436 | 2.2:+67390437 | MS.gene01570:CDS |
AATGTTACCTTGATCCGAAA+TGG | 0.391625 | 2.2:-67393420 | None:intergenic |
TAGCTTAGTGCTAATTTCCT+TGG | 0.409360 | 2.2:-67393651 | None:intergenic |
TGAAGCCCCATTTCGGATCA+AGG | 0.411464 | 2.2:+67393413 | MS.gene01570:CDS |
ATGTTACCTTGATCCGAAAT+GGG | 0.413170 | 2.2:-67393419 | None:intergenic |
CAACTCATCATTATGATTCA+AGG | 0.416320 | 2.2:+67392567 | MS.gene01570:CDS |
TCTGTGAATAATTACGAGAT+AGG | 0.420426 | 2.2:-67392538 | None:intergenic |
CCAATGTAACTTCTAAAACT+TGG | 0.423539 | 2.2:+67393271 | MS.gene01570:CDS |
CCACCTTAACCTAGGCATCT+TGG | 0.426029 | 2.2:-67390207 | None:intergenic |
CATTAGCTGAAGCACCAACT+TGG | 0.437054 | 2.2:-67390391 | None:intergenic |
CATGAACAATATTCATCAAC+CGG | 0.438171 | 2.2:+67393230 | MS.gene01570:CDS |
AGAAATTGGGTTGGTGTCAC+GGG | 0.446810 | 2.2:-67393177 | None:intergenic |
GATCCAAGATGCCTAGGTTA+AGG | 0.450407 | 2.2:+67390204 | MS.gene01570:CDS |
TTCTTGCCTGATTTGCAACT+AGG | 0.451466 | 2.2:+67393575 | MS.gene01570:CDS |
ATATTGTTCATGATTTCAAA+TGG | 0.455511 | 2.2:-67393219 | None:intergenic |
AAGAAATTGGGTTGGTGTCA+CGG | 0.469951 | 2.2:-67393178 | None:intergenic |
CATGCTGTTGATAGACTTGG+TGG | 0.470120 | 2.2:+67390257 | MS.gene01570:CDS |
TACTTTCATCAACAAGCTGC+AGG | 0.473446 | 2.2:-67389977 | None:intergenic |
TTCATCAACCGGAATTCAAA+AGG | 0.482722 | 2.2:+67393241 | MS.gene01570:CDS |
CTAGGTTTGAGTCACACATA+TGG | 0.486414 | 2.2:+67393593 | MS.gene01570:CDS |
CAACATTTCAAGATGGGTAA+TGG | 0.492659 | 2.2:+67392428 | MS.gene01570:CDS |
AATGAGAAGGAAAATATTGA+AGG | 0.500567 | 2.2:+67390122 | MS.gene01570:CDS |
TTGCATGCTGTTGATAGACT+TGG | 0.505073 | 2.2:+67390254 | MS.gene01570:CDS |
GGGCATGGCTGCAGGAGAGT+TGG | 0.508149 | 2.2:-67392506 | None:intergenic |
CACACATATGGAACCAATGA+TGG | 0.515353 | 2.2:+67393605 | MS.gene01570:CDS |
AACCTATTGAGAAAGTTGAA+TGG | 0.520109 | 2.2:+67393298 | MS.gene01570:CDS |
TCTAAGTCAACATTTCAAGA+TGG | 0.523487 | 2.2:+67392421 | MS.gene01570:CDS |
CTAAGTCAACATTTCAAGAT+GGG | 0.525690 | 2.2:+67392422 | MS.gene01570:CDS |
TTCTCTTCAAGAAATTGGGT+TGG | 0.528659 | 2.2:-67393186 | None:intergenic |
GAAGGAAATAATGAAAGAAG+AGG | 0.529416 | 2.2:+67390161 | MS.gene01570:CDS |
ATGTTAGATCCAAGATGCCT+AGG | 0.541984 | 2.2:+67390198 | MS.gene01570:CDS |
ATTAGCTGAAGCACCAACTT+GGG | 0.542418 | 2.2:-67390390 | None:intergenic |
GCTACAAACATGTCAGAAGA+AGG | 0.543883 | 2.2:+67389918 | None:intergenic |
CTGTGAATAATTACGAGATA+GGG | 0.547778 | 2.2:-67392537 | None:intergenic |
AAAATGTAGCAATAAACTTG+TGG | 0.560518 | 2.2:-67393391 | None:intergenic |
GGTAATTGTAGATCAAGAGA+AGG | 0.560724 | 2.2:+67390143 | MS.gene01570:CDS |
GAATGAGAATGAGAATGAGA+AGG | 0.569100 | 2.2:+67390109 | MS.gene01570:CDS |
TGCAGGAGCAACACCCAAGT+TGG | 0.569639 | 2.2:+67390377 | MS.gene01570:intron |
AAATAATGAAAGAAGAGGCA+AGG | 0.577829 | 2.2:+67390166 | MS.gene01570:CDS |
CCAAGATGCCTAGGTTAAGG+TGG | 0.584488 | 2.2:+67390207 | MS.gene01570:CDS |
ATAATTACGAGATAGGGAGA+AGG | 0.593369 | 2.2:-67392531 | None:intergenic |
CAGAGGTCAACACAAGAAGT+TGG | 0.594613 | 2.2:+67392380 | MS.gene01570:CDS |
TGATCTCTAGGCACCAACAT+TGG | 0.600420 | 2.2:+67393124 | MS.gene01570:intron |
TACGAGATAGGGAGAAGGAA+GGG | 0.601154 | 2.2:-67392526 | None:intergenic |
AAACTTGTGGAAGAGTTGCA+AGG | 0.606173 | 2.2:-67393378 | None:intergenic |
CATTTCAAGATGGGTAATGG+TGG | 0.608538 | 2.2:+67392431 | MS.gene01570:CDS |
TGATCATTGCAGAGAGACCA+AGG | 0.608794 | 2.2:+67393634 | MS.gene01570:CDS |
TAACAATTATATTCAGAGTG+AGG | 0.608803 | 2.2:+67389953 | MS.gene01570:CDS |
TGTTACCTTGATCCGAAATG+GGG | 0.609773 | 2.2:-67393418 | None:intergenic |
GATGATTGAAGTGCCAATGT+TGG | 0.609822 | 2.2:-67393137 | None:intergenic |
AAACTTGACGAGTTTGGACA+AGG | 0.614003 | 2.2:+67390809 | MS.gene01570:CDS |
TTACGAGATAGGGAGAAGGA+AGG | 0.615300 | 2.2:-67392527 | None:intergenic |
TCAGGAGTCCACCTTAACCT+AGG | 0.637415 | 2.2:-67390215 | None:intergenic |
CCATGAAGCAACAATACTTG+AGG | 0.647167 | 2.2:+67390067 | MS.gene01570:CDS |
GATAGGGAGAAGGAAGGGCA+TGG | 0.651977 | 2.2:-67392521 | None:intergenic |
GTCACGGGTGCAAATCTGAA+AGG | 0.667252 | 2.2:-67393162 | None:intergenic |
CTTCAGCTAATGAATGTGAG+AGG | 0.670692 | 2.2:+67390402 | MS.gene01570:CDS |
AGGAGAGTTGGATAATACTG+AGG | 0.696332 | 2.2:-67392494 | None:intergenic |
CAGTACTATGCCAAACACAG+AGG | 0.729891 | 2.2:+67392363 | MS.gene01570:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATAGTGAAAATTAATATT+TGG | + | chr2.2:67390338-67390357 | MS.gene01570:intron | 10.0% |
!! | GATTAATACAATTAAAATAT+AGG | - | chr2.2:67392735-67392754 | None:intergenic | 10.0% |
!!! | AGTTTTAATATTTACTTTAT+GGG | + | chr2.2:67391156-67391175 | MS.gene01570:intron | 10.0% |
!!! | CTAAATTTAAAGTTTTAAAA+TGG | - | chr2.2:67393026-67393045 | None:intergenic | 10.0% |
!!! | TTTATTACAATTTTTGTATT+TGG | + | chr2.2:67392277-67392296 | MS.gene01570:intron | 10.0% |
!! | AAAAAATAAAACTATACATC+CGG | + | chr2.2:67392126-67392145 | MS.gene01570:intron | 15.0% |
!! | AAGTAAATATTAAAACTCAA+TGG | - | chr2.2:67391153-67391172 | None:intergenic | 15.0% |
!! | AATCACAAAAATATTTACTA+TGG | - | chr2.2:67391353-67391372 | None:intergenic | 15.0% |
!! | TTGTAATAAATACATTTCAT+AGG | - | chr2.2:67392267-67392286 | None:intergenic | 15.0% |
!!! | AAATTGTTATCAAAATTTTG+CGG | + | chr2.2:67390889-67390908 | MS.gene01570:intron | 15.0% |
!!! | AATTTTGATAACAATTTTTG+AGG | - | chr2.2:67390886-67390905 | None:intergenic | 15.0% |
!!! | AGTTTATTTTCTTTTTAATG+TGG | - | chr2.2:67391861-67391880 | None:intergenic | 15.0% |
!!! | ATAATCATTAGATTATTTTG+TGG | - | chr2.2:67390758-67390777 | None:intergenic | 15.0% |
!!! | CAATTTTGTATTCATTTTTT+TGG | - | chr2.2:67390845-67390864 | None:intergenic | 15.0% |
!!! | GAGTTTTAATATTTACTTTA+TGG | + | chr2.2:67391155-67391174 | MS.gene01570:intron | 15.0% |
!!! | GATGTATAGTTTTATTTTTT+TGG | - | chr2.2:67392126-67392145 | None:intergenic | 15.0% |
!!! | TAATCATTAGATTATTTTGT+GGG | - | chr2.2:67390757-67390776 | None:intergenic | 15.0% |
!!! | TATAGTTTTATTTTTTTGGT+TGG | - | chr2.2:67392122-67392141 | None:intergenic | 15.0% |
!!! | TTTCTCATTTTATATATTGA+TGG | - | chr2.2:67391546-67391565 | None:intergenic | 15.0% |
!! | AATTTCATTTAGTAAATGGT+AGG | - | chr2.2:67392709-67392728 | None:intergenic | 20.0% |
!! | AATTTCTTGAAGAGAAAAAT+TGG | + | chr2.2:67393193-67393212 | MS.gene01570:CDS | 20.0% |
!! | ATATTCGAAAGAAATTCTAA+AGG | - | chr2.2:67391479-67391498 | None:intergenic | 20.0% |
!! | ATATTGTTCATGATTTCAAA+TGG | - | chr2.2:67393222-67393241 | None:intergenic | 20.0% |
!! | CAAAACAACAATATCTAAAA+AGG | + | chr2.2:67392201-67392220 | MS.gene01570:intron | 20.0% |
!! | GGTTAATTTCATTTAGTAAA+TGG | - | chr2.2:67392713-67392732 | None:intergenic | 20.0% |
!! | GTAAAAAAAGAAATGAAAGT+TGG | + | chr2.2:67392936-67392955 | MS.gene01570:intron | 20.0% |
!! | GTGAAAATTAATATTTGGTT+TGG | + | chr2.2:67390343-67390362 | MS.gene01570:intron | 20.0% |
!! | TCTTAAACTTCAATTTATTG+TGG | - | chr2.2:67390465-67390484 | None:intergenic | 20.0% |
!! | TTATATGAGAAACTCTTATT+TGG | - | chr2.2:67391720-67391739 | None:intergenic | 20.0% |
!!! | AATGCAAAATTGCTTATTTT+GGG | - | chr2.2:67391220-67391239 | None:intergenic | 20.0% |
!!! | AATTTTTCTCTTCAAGAAAT+TGG | - | chr2.2:67393194-67393213 | None:intergenic | 20.0% |
!!! | AGTGTAATAAATTTTGCTTA+TGG | - | chr2.2:67390725-67390744 | None:intergenic | 20.0% |
!!! | ATTTTTCTCTTCAAGAAATT+GGG | - | chr2.2:67393193-67393212 | None:intergenic | 20.0% |
!!! | TGAAGATTTTTTTATCTCAA+CGG | - | chr2.2:67390671-67390690 | None:intergenic | 20.0% |
!!! | TGTAGTTTTTTTTTTCTTCT+TGG | + | chr2.2:67391418-67391437 | MS.gene01570:intron | 20.0% |
!!! | TTTGTATTCATTTTTTTGGA+TGG | - | chr2.2:67390841-67390860 | None:intergenic | 20.0% |
! | AAAACTATACATGCTAACAA+TGG | - | chr2.2:67392313-67392332 | None:intergenic | 25.0% |
! | AAAATGTAGCAATAAACTTG+TGG | - | chr2.2:67393394-67393413 | None:intergenic | 25.0% |
! | AAACTATACATGCTAACAAT+GGG | - | chr2.2:67392312-67392331 | None:intergenic | 25.0% |
! | AACAAAATCTAAGAAGGAAA+TGG | + | chr2.2:67390998-67391017 | MS.gene01570:intron | 25.0% |
! | AATGAGAAGGAAAATATTGA+AGG | + | chr2.2:67390122-67390141 | MS.gene01570:CDS | 25.0% |
! | AGCATTTAGACACAAAATTT+AGG | + | chr2.2:67391582-67391601 | MS.gene01570:intron | 25.0% |
! | ATTAAAAAATGGGAGTAAAG+CGG | + | chr2.2:67391511-67391530 | MS.gene01570:intron | 25.0% |
! | ATTAAGGAAAACAAGATGAA+AGG | - | chr2.2:67392609-67392628 | None:intergenic | 25.0% |
! | CAATGTGTACACATTTATAA+AGG | + | chr2.2:67392961-67392980 | MS.gene01570:intron | 25.0% |
! | TAACAATTATATTCAGAGTG+AGG | + | chr2.2:67389953-67389972 | MS.gene01570:CDS | 25.0% |
! | TATCTTCACACAAAAATTGT+AGG | - | chr2.2:67392817-67392836 | None:intergenic | 25.0% |
! | TATTTGATGTCTTGTATCAA+AGG | - | chr2.2:67391927-67391946 | None:intergenic | 25.0% |
!! | CAAAATAAGCAATTTTGCAT+TGG | + | chr2.2:67391219-67391238 | MS.gene01570:intron | 25.0% |
!! | CAATGCAAAATTGCTTATTT+TGG | - | chr2.2:67391221-67391240 | None:intergenic | 25.0% |
!! | TCTACTATACCATTTTGTTA+CGG | + | chr2.2:67391831-67391850 | MS.gene01570:intron | 25.0% |
!! | TTCAAAGATTTTGTGGAAAA+AGG | - | chr2.2:67391125-67391144 | None:intergenic | 25.0% |
!!! | ATGCGTTTTGTTTGTTTTTT+GGG | - | chr2.2:67391774-67391793 | None:intergenic | 25.0% |
!!! | CCTTCTTAGATTTTGTTTTT+GGG | - | chr2.2:67390995-67391014 | None:intergenic | 25.0% |
!!! | CTTCTTAGATTTTGTTTTTG+GGG | - | chr2.2:67390994-67391013 | None:intergenic | 25.0% |
!!! | TATGCGTTTTGTTTGTTTTT+TGG | - | chr2.2:67391775-67391794 | None:intergenic | 25.0% |
!!! | TCCTTCTTAGATTTTGTTTT+TGG | - | chr2.2:67390996-67391015 | None:intergenic | 25.0% |
!!! | TTGTTTTGTTATGTTGACTT+TGG | - | chr2.2:67392189-67392208 | None:intergenic | 25.0% |
!!! | TTTTTTTTCTTCTTGGTCAA+GGG | + | chr2.2:67391425-67391444 | MS.gene01570:intron | 25.0% |
!!! | TTTTTTTTTCTTCTTGGTCA+AGG | + | chr2.2:67391424-67391443 | MS.gene01570:intron | 25.0% |
AAAAAAGAATGATGAAGCTC+AGG | - | chr2.2:67390236-67390255 | None:intergenic | 30.0% | |
AAACAAGATGAAAGGAATGT+AGG | - | chr2.2:67392601-67392620 | None:intergenic | 30.0% | |
AAATAATGAAAGAAGAGGCA+AGG | + | chr2.2:67390166-67390185 | MS.gene01570:CDS | 30.0% | |
AACCTATTGAGAAAGTTGAA+TGG | + | chr2.2:67393298-67393317 | MS.gene01570:CDS | 30.0% | |
AAGTGATGAAGGAAGAATTT+AGG | + | chr2.2:67391066-67391085 | MS.gene01570:intron | 30.0% | |
ACTTACACCTAAAACTTATC+TGG | - | chr2.2:67391030-67391049 | None:intergenic | 30.0% | |
AGGACGATGAAATAAAACAT+TGG | - | chr2.2:67392247-67392266 | None:intergenic | 30.0% | |
AGTGATGAAGGAAGAATTTA+GGG | + | chr2.2:67391067-67391086 | MS.gene01570:intron | 30.0% | |
ATATTAGTATTCAGTCCAAG+TGG | + | chr2.2:67390541-67390560 | MS.gene01570:intron | 30.0% | |
ATGATCAATCTTACCATCAT+TGG | - | chr2.2:67393621-67393640 | None:intergenic | 30.0% | |
CAACTCATCATTATGATTCA+AGG | + | chr2.2:67392567-67392586 | MS.gene01570:CDS | 30.0% | |
CATGAACAATATTCATCAAC+CGG | + | chr2.2:67393230-67393249 | MS.gene01570:CDS | 30.0% | |
CCCAAAAACAAAATCTAAGA+AGG | + | chr2.2:67390992-67391011 | MS.gene01570:intron | 30.0% | |
CTAAGTCAACATTTCAAGAT+GGG | + | chr2.2:67392422-67392441 | MS.gene01570:CDS | 30.0% | |
CTGTGAATAATTACGAGATA+GGG | - | chr2.2:67392540-67392559 | None:intergenic | 30.0% | |
GAAGGAAATAATGAAAGAAG+AGG | + | chr2.2:67390161-67390180 | MS.gene01570:CDS | 30.0% | |
GATGAAAGTAATACTTCATC+TGG | + | chr2.2:67389990-67390009 | MS.gene01570:CDS | 30.0% | |
GGGAAACAAAAACAAAATGA+AGG | - | chr2.2:67392084-67392103 | None:intergenic | 30.0% | |
TCATTTCTCCAGAAATTAGA+GGG | + | chr2.2:67390643-67390662 | MS.gene01570:intron | 30.0% | |
TCTAAGTCAACATTTCAAGA+TGG | + | chr2.2:67392421-67392440 | MS.gene01570:CDS | 30.0% | |
TCTGTGAATAATTACGAGAT+AGG | - | chr2.2:67392541-67392560 | None:intergenic | 30.0% | |
TGGACTGAATACTAATATTG+AGG | - | chr2.2:67390539-67390558 | None:intergenic | 30.0% | |
TTATATTGTGTCTCTTGTCT+TGG | - | chr2.2:67391747-67391766 | None:intergenic | 30.0% | |
TTCCATTCAACTTTCTCAAT+AGG | - | chr2.2:67393303-67393322 | None:intergenic | 30.0% | |
! | CTACTATACCATTTTGTTAC+GGG | + | chr2.2:67391832-67391851 | MS.gene01570:intron | 30.0% |
! | GGTCATATTCAAAGATTTTG+TGG | - | chr2.2:67391132-67391151 | None:intergenic | 30.0% |
! | GTAGATACCAGATAAGTTTT+AGG | + | chr2.2:67391020-67391039 | MS.gene01570:intron | 30.0% |
! | TGTTATCAAAATTTTGCGGA+AGG | + | chr2.2:67390893-67390912 | MS.gene01570:intron | 30.0% |
!! | CCAATGTAACTTCTAAAACT+TGG | + | chr2.2:67393271-67393290 | MS.gene01570:CDS | 30.0% |
!!! | CCAAGTTTTAGAAGTTACAT+TGG | - | chr2.2:67393274-67393293 | None:intergenic | 30.0% |
!!! | GTTATGTTGACTTTGGTTTT+AGG | - | chr2.2:67392182-67392201 | None:intergenic | 30.0% |
!!! | TTGTTTTTGGGGAAAGATTT+TGG | - | chr2.2:67390983-67391002 | None:intergenic | 30.0% |
AAAACCAACACCTCACATTT+AGG | - | chr2.2:67391693-67391712 | None:intergenic | 35.0% | |
AAGTGAAATCTTGAAGGAGA+AGG | - | chr2.2:67391950-67391969 | None:intergenic | 35.0% | |
AATGTTACCTTGATCCGAAA+TGG | - | chr2.2:67393423-67393442 | None:intergenic | 35.0% | |
ATAATTACGAGATAGGGAGA+AGG | - | chr2.2:67392534-67392553 | None:intergenic | 35.0% | |
ATGTTACCTTGATCCGAAAT+GGG | - | chr2.2:67393422-67393441 | None:intergenic | 35.0% | |
CAACATTTCAAGATGGGTAA+TGG | + | chr2.2:67392428-67392447 | MS.gene01570:CDS | 35.0% | |
CATGAATCACATCTAAGAGA+TGG | + | chr2.2:67391800-67391819 | MS.gene01570:intron | 35.0% | |
CATGTTAACTTATGCCCTAA+GGG | + | chr2.2:67391180-67391199 | MS.gene01570:intron | 35.0% | |
CTCATTTCTCCAGAAATTAG+AGG | + | chr2.2:67390642-67390661 | MS.gene01570:intron | 35.0% | |
CTGTTTCAACAAAGTGATGA+AGG | + | chr2.2:67391055-67391074 | MS.gene01570:intron | 35.0% | |
CTTCATCACTTTGTTGAAAC+AGG | - | chr2.2:67391057-67391076 | None:intergenic | 35.0% | |
GAAATAAGAGAGTAACCACT+TGG | - | chr2.2:67390559-67390578 | None:intergenic | 35.0% | |
GAATGAGAATGAGAATGAGA+AGG | + | chr2.2:67390109-67390128 | MS.gene01570:CDS | 35.0% | |
GAGAGAGATTAATTGCAAGA+AGG | - | chr2.2:67393094-67393113 | None:intergenic | 35.0% | |
GAGTATTTGTCTGTGAATAG+TGG | + | chr2.2:67392771-67392790 | MS.gene01570:intron | 35.0% | |
GGTAATTGTAGATCAAGAGA+AGG | + | chr2.2:67390143-67390162 | MS.gene01570:CDS | 35.0% | |
GTGATTAAACCTCTTGTTCA+TGG | + | chr2.2:67391367-67391386 | MS.gene01570:intron | 35.0% | |
GTTGGAAAGCTAAAGAGAAA+GGG | - | chr2.2:67392104-67392123 | None:intergenic | 35.0% | |
TAGCTTAGTGCTAATTTCCT+TGG | - | chr2.2:67393654-67393673 | None:intergenic | 35.0% | |
TCATGTTAACTTATGCCCTA+AGG | + | chr2.2:67391179-67391198 | MS.gene01570:intron | 35.0% | |
TGAGCAAAGTGAAATCTTGA+AGG | - | chr2.2:67391956-67391975 | None:intergenic | 35.0% | |
TTAAACCTCTTGTTCATGGT+TGG | + | chr2.2:67391371-67391390 | MS.gene01570:intron | 35.0% | |
TTCATCAACCGGAATTCAAA+AGG | + | chr2.2:67393241-67393260 | MS.gene01570:CDS | 35.0% | |
TTCTCTTCAAGAAATTGGGT+TGG | - | chr2.2:67393189-67393208 | None:intergenic | 35.0% | |
TTTCGGATCAAGGTAACATT+AGG | + | chr2.2:67393423-67393442 | MS.gene01570:intron | 35.0% | |
TTTGGCAGAAAGAAAAGAGA+TGG | - | chr2.2:67390965-67390984 | None:intergenic | 35.0% | |
! | AATTTAGGGTTAGCATCACT+AGG | + | chr2.2:67391081-67391100 | MS.gene01570:intron | 35.0% |
! | ACCTTTTGTTGCAATTTTGC+CGG | - | chr2.2:67392148-67392167 | None:intergenic | 35.0% |
!!! | TACATTTTGAAGCCCCATTT+CGG | + | chr2.2:67393406-67393425 | MS.gene01570:CDS | 35.0% |
AAACTTGACGAGTTTGGACA+AGG | + | chr2.2:67390809-67390828 | MS.gene01570:CDS | 40.0% | |
AAACTTGTGGAAGAGTTGCA+AGG | - | chr2.2:67393381-67393400 | None:intergenic | 40.0% | |
AGCAAGAAACTTGACGAGTT+TGG | + | chr2.2:67390803-67390822 | MS.gene01570:CDS | 40.0% | |
AGGAGAGTTGGATAATACTG+AGG | - | chr2.2:67392497-67392516 | None:intergenic | 40.0% | |
ATGTTAGATCCAAGATGCCT+AGG | + | chr2.2:67390198-67390217 | MS.gene01570:CDS | 40.0% | |
CACACATATGGAACCAATGA+TGG | + | chr2.2:67393605-67393624 | MS.gene01570:CDS | 40.0% | |
CCATGAAGCAACAATACTTG+AGG | + | chr2.2:67390067-67390086 | MS.gene01570:CDS | 40.0% | |
CTAGGTTTGAGTCACACATA+TGG | + | chr2.2:67393593-67393612 | MS.gene01570:CDS | 40.0% | |
CTCAAACCTAGTTGCAAATC+AGG | - | chr2.2:67393584-67393603 | None:intergenic | 40.0% | |
CTTCAGCTAATGAATGTGAG+AGG | + | chr2.2:67390402-67390421 | MS.gene01570:CDS | 40.0% | |
GGTTGGAAAGCTAAAGAGAA+AGG | - | chr2.2:67392105-67392124 | None:intergenic | 40.0% | |
TACTTTCATCAACAAGCTGC+AGG | - | chr2.2:67389980-67389999 | None:intergenic | 40.0% | |
TCCGGCAAAATTGCAACAAA+AGG | + | chr2.2:67392144-67392163 | MS.gene01570:intron | 40.0% | |
TGAAGGTTCATGATGTCATC+CGG | - | chr2.2:67392067-67392086 | None:intergenic | 40.0% | |
TGTGGATACCCGTAACAAAA+TGG | - | chr2.2:67391843-67391862 | None:intergenic | 40.0% | |
TGTTACCTTGATCCGAAATG+GGG | - | chr2.2:67393421-67393440 | None:intergenic | 40.0% | |
TTCCTTAACATGTGCCCTTA+GGG | - | chr2.2:67391197-67391216 | None:intergenic | 40.0% | |
TTTCACTTTGCTCAAGCTCT+CGG | + | chr2.2:67391962-67391981 | MS.gene01570:intron | 40.0% | |
! | ATTAGCTGAAGCACCAACTT+GGG | - | chr2.2:67390393-67390412 | None:intergenic | 40.0% |
! | CATTTCAAGATGGGTAATGG+TGG | + | chr2.2:67392431-67392450 | MS.gene01570:CDS | 40.0% |
! | CCTCAAGTATTGTTGCTTCA+TGG | - | chr2.2:67390070-67390089 | None:intergenic | 40.0% |
! | GATGATTGAAGTGCCAATGT+TGG | - | chr2.2:67393140-67393159 | None:intergenic | 40.0% |
! | GCAAGTAGCCTTTTGAATTC+CGG | - | chr2.2:67393252-67393271 | None:intergenic | 40.0% |
! | TTCTTGCCTGATTTGCAACT+AGG | + | chr2.2:67393575-67393594 | MS.gene01570:CDS | 40.0% |
! | TTGCATGCTGTTGATAGACT+TGG | + | chr2.2:67390254-67390273 | MS.gene01570:CDS | 40.0% |
!! | AAGAAATTGGGTTGGTGTCA+CGG | - | chr2.2:67393181-67393200 | None:intergenic | 40.0% |
!!! | GTGGCATATTTTGGTGGATT+TGG | + | chr2.2:67391393-67391412 | MS.gene01570:intron | 40.0% |
!!! | TCATGGTTGGTGGCATATTT+TGG | + | chr2.2:67391384-67391403 | MS.gene01570:intron | 40.0% |
AACCTCTTGTTCATGGTTGG+TGG | + | chr2.2:67391374-67391393 | MS.gene01570:intron | 45.0% | |
CAACGGTACCCTCTAATTTC+TGG | - | chr2.2:67390654-67390673 | None:intergenic | 45.0% | |
CAGAGGTCAACACAAGAAGT+TGG | + | chr2.2:67392380-67392399 | MS.gene01570:CDS | 45.0% | |
CAGTACTATGCCAAACACAG+AGG | + | chr2.2:67392363-67392382 | MS.gene01570:intron | 45.0% | |
GATCCAAGATGCCTAGGTTA+AGG | + | chr2.2:67390204-67390223 | MS.gene01570:CDS | 45.0% | |
GTTCCTTAACATGTGCCCTT+AGG | - | chr2.2:67391328-67391309 | None:intergenic | 45.0% | |
TACGAGATAGGGAGAAGGAA+GGG | - | chr2.2:67392529-67392548 | None:intergenic | 45.0% | |
TCATGTCAAGTCTCACTTGC+AGG | + | chr2.2:67390437-67390456 | MS.gene01570:CDS | 45.0% | |
TCCTTAACATGTGCCCTTGA+GGG | + | chr2.2:67391311-67391330 | MS.gene01570:intron | 45.0% | |
TCTCTCTCTCTCTGATCTCT+AGG | + | chr2.2:67393112-67393131 | MS.gene01570:intron | 45.0% | |
TGAGTGTGTGCCTAAATGTG+AGG | + | chr2.2:67391680-67391699 | MS.gene01570:intron | 45.0% | |
TGATCATTGCAGAGAGACCA+AGG | + | chr2.2:67393634-67393653 | MS.gene01570:CDS | 45.0% | |
TGATCTCTAGGCACCAACAT+TGG | + | chr2.2:67393124-67393143 | MS.gene01570:intron | 45.0% | |
TGTGCCTAAATGTGAGGTGT+TGG | + | chr2.2:67391686-67391705 | MS.gene01570:intron | 45.0% | |
TTACGAGATAGGGAGAAGGA+AGG | - | chr2.2:67392530-67392549 | None:intergenic | 45.0% | |
TTCCTTAACATGTGCCCTTG+AGG | + | chr2.2:67391310-67391329 | MS.gene01570:intron | 45.0% | |
! | AATGCTAACTTGTGCCCTCA+AGG | - | chr2.2:67391328-67391347 | None:intergenic | 45.0% |
! | ATGCTAACTTGTGCCCTCAA+GGG | - | chr2.2:67391327-67391346 | None:intergenic | 45.0% |
! | CATGCTGTTGATAGACTTGG+TGG | + | chr2.2:67390257-67390276 | MS.gene01570:CDS | 45.0% |
! | CATTAGCTGAAGCACCAACT+TGG | - | chr2.2:67390394-67390413 | None:intergenic | 45.0% |
! | CTTGTGTTGACCTCTGTGTT+TGG | - | chr2.2:67392376-67392395 | None:intergenic | 45.0% |
! | GTTTGGTTCAACTCTGATGC+AGG | + | chr2.2:67390360-67390379 | MS.gene01570:intron | 45.0% |
!! | AGAAATTGGGTTGGTGTCAC+GGG | - | chr2.2:67393180-67393199 | None:intergenic | 45.0% |
!!! | TGGTTGGTGGCATATTTTGG+TGG | + | chr2.2:67391387-67391406 | MS.gene01570:intron | 45.0% |
!! | AAAAGAAATAAATTAAAAAA+TGG | + | chr2.2:67391500-67391519 | MS.gene01570:intron | 5.0% |
!! | AAAGAAATAAATTAAAAAAT+GGG | + | chr2.2:67391501-67391520 | MS.gene01570:intron | 5.0% |
!! | ATTAATACAATTAAAATATA+GGG | - | chr2.2:67392734-67392753 | None:intergenic | 5.0% |
!! | TTAATAATATAGTTTAATTA+AGG | - | chr2.2:67392625-67392644 | None:intergenic | 5.0% |
AGGTTCATGATGTCATCCGG+AGG | - | chr2.2:67392064-67392083 | None:intergenic | 50.0% | |
CCAAGATGCCTAGGTTAAGG+TGG | + | chr2.2:67390207-67390226 | MS.gene01570:CDS | 50.0% | |
CCACCTTAACCTAGGCATCT+TGG | - | chr2.2:67390210-67390229 | None:intergenic | 50.0% | |
GTCACGGGTGCAAATCTGAA+AGG | - | chr2.2:67393165-67393184 | None:intergenic | 50.0% | |
TCAGGAGTCCACCTTAACCT+AGG | - | chr2.2:67390218-67390237 | None:intergenic | 50.0% | |
TGAAGCCCCATTTCGGATCA+AGG | + | chr2.2:67393413-67393432 | MS.gene01570:CDS | 50.0% | |
TGCCACCAACCATGAACAAG+AGG | - | chr2.2:67391379-67391398 | None:intergenic | 50.0% | |
TTTGCTCAAGCTCTCGGAGA+AGG | + | chr2.2:67391968-67391987 | MS.gene01570:intron | 50.0% | |
! | TGCCCTAAGGGCACATGTTA+AGG | + | chr2.2:67391192-67391211 | MS.gene01570:intron | 50.0% |
GATAGGGAGAAGGAAGGGCA+TGG | - | chr2.2:67392524-67392543 | None:intergenic | 55.0% | |
TGATGTCATCCGGAGGAGAG+TGG | - | chr2.2:67392057-67392076 | None:intergenic | 55.0% | |
TGCAGGAGCAACACCCAAGT+TGG | + | chr2.2:67390377-67390396 | MS.gene01570:intron | 55.0% | |
! | GCCCTCAAGGGCACATGTTA+AGG | - | chr2.2:67391315-67391334 | None:intergenic | 55.0% |
CTTCGTCCACCACTCTCCTC+CGG | + | chr2.2:67392045-67392064 | MS.gene01570:intron | 60.0% | |
TGTCATCCGGAGGAGAGTGG+TGG | - | chr2.2:67392054-67392073 | None:intergenic | 60.0% | |
! | AGAAGGAAGGGCATGGCTGC+AGG | - | chr2.2:67392517-67392536 | None:intergenic | 60.0% |
GGGCATGGCTGCAGGAGAGT+TGG | - | chr2.2:67392509-67392528 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 67389927 | 67393685 | 67389927 | ID=MS.gene01570 |
chr2.2 | mRNA | 67389927 | 67393685 | 67389927 | ID=MS.gene01570.t1;Parent=MS.gene01570 |
chr2.2 | exon | 67389927 | 67390287 | 67389927 | ID=MS.gene01570.t1.exon1;Parent=MS.gene01570.t1 |
chr2.2 | CDS | 67389927 | 67390287 | 67389927 | ID=cds.MS.gene01570.t1;Parent=MS.gene01570.t1 |
chr2.2 | exon | 67390382 | 67390458 | 67390382 | ID=MS.gene01570.t1.exon2;Parent=MS.gene01570.t1 |
chr2.2 | CDS | 67390382 | 67390458 | 67390382 | ID=cds.MS.gene01570.t1;Parent=MS.gene01570.t1 |
chr2.2 | exon | 67390794 | 67390830 | 67390794 | ID=MS.gene01570.t1.exon3;Parent=MS.gene01570.t1 |
chr2.2 | CDS | 67390794 | 67390830 | 67390794 | ID=cds.MS.gene01570.t1;Parent=MS.gene01570.t1 |
chr2.2 | exon | 67392366 | 67392588 | 67392366 | ID=MS.gene01570.t1.exon4;Parent=MS.gene01570.t1 |
chr2.2 | CDS | 67392366 | 67392588 | 67392366 | ID=cds.MS.gene01570.t1;Parent=MS.gene01570.t1 |
chr2.2 | exon | 67393134 | 67393434 | 67393134 | ID=MS.gene01570.t1.exon5;Parent=MS.gene01570.t1 |
chr2.2 | CDS | 67393134 | 67393434 | 67393134 | ID=cds.MS.gene01570.t1;Parent=MS.gene01570.t1 |
chr2.2 | exon | 67393539 | 67393685 | 67393539 | ID=MS.gene01570.t1.exon6;Parent=MS.gene01570.t1 |
chr2.2 | CDS | 67393539 | 67393685 | 67393539 | ID=cds.MS.gene01570.t1;Parent=MS.gene01570.t1 |
Gene Sequence |
Protein sequence |