AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene015973

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene015973.t1 MTR_1g012020 93.585 873 42 5 1 865 1 867 0.0 1608
MS.gene015973.t1 MTR_5g006530 48.404 188 94 3 473 659 240 425 1.85e-50 187
MS.gene015973.t1 MTR_5g006530 48.404 188 94 3 473 659 464 649 7.00e-50 189
MS.gene015973.t1 MTR_1g080640 62.500 96 34 1 422 517 5 98 2.52e-30 115
MS.gene015973.t1 MTR_8g095100 61.458 96 35 1 422 517 5 98 4.17e-30 115
MS.gene015973.t1 MTR_8g103320 41.040 173 90 6 469 635 52 218 2.00e-29 123
MS.gene015973.t1 MTR_1g101580 60.417 96 36 1 422 517 5 98 3.86e-29 112
MS.gene015973.t1 MTR_1g073270 60.417 96 36 1 422 517 5 98 5.32e-29 111
MS.gene015973.t1 MTR_2g049090 56.481 108 35 2 422 517 5 112 5.70e-29 112
MS.gene015973.t1 MTR_6g087590 47.727 132 60 3 496 624 128 253 1.46e-28 122
MS.gene015973.t1 MTR_3g110122 38.172 186 106 5 439 621 90 269 1.77e-28 122
MS.gene015973.t1 MTR_6g071120 49.612 129 39 2 389 517 1 103 5.03e-28 109
MS.gene015973.t1 MTR_1g027430 82.258 62 11 0 422 483 5 66 1.44e-27 107
MS.gene015973.t1 MTR_7g022680 80.645 62 12 0 422 483 5 66 1.57e-26 104
MS.gene015973.t1 MTR_4g076830 64.286 84 22 1 422 497 5 88 1.62e-26 104
MS.gene015973.t1 MTR_1g012000 89.091 55 6 0 38 92 9 63 3.02e-26 103
MS.gene015973.t1 MTR_0181s0060 55.670 97 31 2 429 513 35 131 1.10e-23 98.2
MS.gene015973.t1 MTR_4g010860 67.089 79 23 1 422 497 6 84 2.40e-23 95.5
MS.gene015973.t1 MTR_1g103230 41.322 121 69 1 504 624 446 564 5.16e-23 105
MS.gene015973.t1 MTR_5g011530 58.750 80 25 1 426 497 43 122 6.21e-20 87.0
MS.gene015973.t1 MTR_8g015660 75.806 62 13 1 422 483 9 68 1.21e-19 94.0
MS.gene015973.t1 MTR_1g011990 69.565 69 8 2 257 316 46 110 1.23e-18 91.7
MS.gene015973.t1 MTR_2g036100 47.170 106 22 2 422 517 5 86 4.33e-18 80.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene015973.t1 AT3G22780 33.515 549 241 23 310 843 254 693 6.53e-62 223
MS.gene015973.t1 AT3G22760 39.812 319 139 10 318 636 77 342 1.86e-52 191
MS.gene015973.t1 AT3G22760 39.812 319 139 10 318 636 200 465 8.94e-52 192
MS.gene015973.t1 AT4G14770 38.636 308 138 8 317 624 225 481 3.08e-50 188
MS.gene015973.t1 AT4G14770 27.976 336 180 13 563 843 324 652 8.38e-15 79.0
MS.gene015973.t1 AT4G14770 38.636 308 138 8 317 624 226 482 3.27e-50 188
MS.gene015973.t1 AT4G14770 27.976 336 180 13 563 843 325 653 9.15e-15 79.0
MS.gene015973.t1 AT4G14770 38.636 308 138 8 317 624 245 501 3.91e-50 188
MS.gene015973.t1 AT4G14770 27.300 337 181 12 563 843 344 672 9.66e-15 79.0
MS.gene015973.t1 AT3G04850 32.857 350 167 10 296 621 271 576 4.09e-45 173
MS.gene015973.t1 AT5G25790 43.750 160 77 7 478 633 74 224 2.20e-30 125
MS.gene015973.t1 AT5G25790 42.593 162 80 6 478 633 74 228 3.58e-30 125
MS.gene015973.t1 AT5G25790 40.437 183 90 7 457 633 59 228 4.19e-30 125
MS.gene015973.t1 AT2G20110 46.099 141 67 4 496 632 119 254 5.03e-30 126
MS.gene015973.t1 AT2G20110 46.099 141 67 4 496 632 119 254 6.98e-30 126
MS.gene015973.t1 AT2G20110 46.099 141 67 4 496 632 119 254 9.84e-30 125
MS.gene015973.t1 AT4G29000 44.366 142 68 5 496 632 132 267 6.27e-28 120
MS.gene015973.t1 AT3G16160 46.774 124 60 3 496 619 66 183 1.07e-24 107

Find 203 sgRNAs with CRISPR-Local

Find 387 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTAGACGCTGCCTACAATT+TGG 0.186201 1.2:+9257001 MS.gene015973:CDS
TGCGGTATTCGCCAGTTATC+TGG 0.216353 1.2:+9259527 MS.gene015973:CDS
GAAGCCTTGACAGACTTTAT+TGG 0.240331 1.2:-9255136 None:intergenic
AGCATCTGTCGATGAATATT+TGG 0.259084 1.2:+9255529 MS.gene015973:CDS
GTGGAGGAGAAACTCTCTTT+TGG 0.268257 1.2:-9259709 None:intergenic
ATGTTTCTGTGTCTGATAAA+TGG 0.269432 1.2:-9255352 None:intergenic
TTCTCCCCTTCAATTGTTGC+AGG 0.272545 1.2:-9255740 None:intergenic
TGGTAACAGAGTAGAATTTC+AGG 0.294634 1.2:+9257782 MS.gene015973:CDS
ATGCAAACTTATAGAAGATT+TGG 0.296279 1.2:-9257221 None:intergenic
GAAGCTGCTTCCGTTGTTCT+TGG 0.299878 1.2:+9257025 MS.gene015973:CDS
CATTGCAACAATGGTGTTAC+AGG 0.307892 1.2:-9259198 None:intergenic
TTCTTAATCTGAGAAGCTTC+TGG 0.309298 1.2:-9254037 None:intergenic
GTAGACGCTGCCTACAATTT+GGG 0.311899 1.2:+9257002 MS.gene015973:CDS
CTCTTATCAGGTGCATTTGC+CGG 0.312680 1.2:-9257400 None:intergenic
ATGCTGGAGGACTGCTGCTC+TGG 0.318764 1.2:-9255511 None:intergenic
TTCTATAAGTTTGCATATAG+TGG 0.322912 1.2:+9257228 MS.gene015973:CDS
CATGCGACACATGGGTTTCT+CGG 0.326256 1.2:+9255160 MS.gene015973:CDS
TTTGTTGGAGGAATCTAATA+TGG 0.332408 1.2:+9255685 MS.gene015973:CDS
ATCCTCAACTCCGTCCAATA+TGG 0.338930 1.2:+9257264 MS.gene015973:CDS
TGATGTTCCACTGAATAATA+TGG 0.341118 1.2:+9257884 MS.gene015973:CDS
TTGCAATGGCAATGAGGATT+CGG 0.342240 1.2:+9259853 MS.gene015973:CDS
AATTTATATTAAAATTTGAT+AGG 0.342632 1.2:+9255624 MS.gene015973:CDS
CTGGCGAATACCGCATCTAT+TGG 0.354125 1.2:-9259519 None:intergenic
GGGCGTACCCTCCTCTTATC+AGG 0.364892 1.2:-9257412 None:intergenic
TGCAGTTACTGTGATTGTTT+TGG 0.366597 1.2:+9257717 MS.gene015973:intron
AGCAAATGCTTGTGGATTAC+GGG 0.369212 1.2:-9257838 None:intergenic
AGTGTTGACAAATCTCAAAA+AGG 0.377839 1.2:-9255107 None:intergenic
AAAAGATTGATCATCCATAT+TGG 0.378531 1.2:-9257278 None:intergenic
AGCTGCACATGGTACAATCT+TGG 0.387960 1.2:-9257862 None:intergenic
ATTTGCTTTCACAGACTTGA+TGG 0.391070 1.2:-9259678 None:intergenic
GAGCAAATGCTTGTGGATTA+CGG 0.393901 1.2:-9257839 None:intergenic
CTACTGAAGCATCAGTTTCA+TGG 0.398320 1.2:-9257321 None:intergenic
TGCAATGGCAATGAGGATTC+GGG 0.411133 1.2:+9259854 MS.gene015973:CDS
AAGTTAGCGCTTGGGGTAAT+CGG 0.415030 1.2:-9259578 None:intergenic
GACAGAAAATTGTGACAATC+AGG 0.415519 1.2:+9259142 MS.gene015973:CDS
CAACCCAATGCCTGGTGGCT+TGG 0.420396 1.2:-9257116 None:intergenic
GCGGTATTCGCCAGTTATCT+GGG 0.421949 1.2:+9259528 MS.gene015973:CDS
GAGATTATCAGATGGTATAC+AGG 0.422125 1.2:+9257195 MS.gene015973:CDS
AGTTCTTCTGCTATGTTACT+AGG 0.425346 1.2:-9255656 None:intergenic
CATCATCTAAGTTAGCGCTT+GGG 0.426755 1.2:-9259586 None:intergenic
TGATCCTATCCAGGCTGTTA+AGG 0.432469 1.2:+9256050 MS.gene015973:CDS
GAAAATCCTGCAACAATTGA+AGG 0.434474 1.2:+9255734 MS.gene015973:CDS
ACTTTGCACCCTGCTTGCCT+TGG 0.435412 1.2:-9259346 None:intergenic
AATGATGTATACTTGAACTT+GGG 0.435796 1.2:-9254134 None:intergenic
CGGATTGGATCAAGCTCCTC+AGG 0.435804 1.2:+9259746 MS.gene015973:CDS
GCTAACGTTGGATGCTCGAC+TGG 0.440058 1.2:+9258178 MS.gene015973:CDS
GAAGCTTCCTTCAATACATC+AGG 0.449228 1.2:-9259650 None:intergenic
CGAGTATTGTGTTTCACGGT+GGG 0.450483 1.2:-9255230 None:intergenic
GATGGATGTATGAATGTCTT+TGG 0.451729 1.2:+9258211 MS.gene015973:CDS
TGAAACACCTGATGTATTGA+AGG 0.458665 1.2:+9259643 MS.gene015973:CDS
TTCTTACAGTTGCACGTCTT+AGG 0.458861 1.2:-9257599 None:intergenic
TTTGTATGTATCAGGCTTGA+AGG 0.461411 1.2:+9255326 MS.gene015973:intron
TCATCATCTAAGTTAGCGCT+TGG 0.462532 1.2:-9259587 None:intergenic
TTTCCAAGCCACCAGGCATT+GGG 0.462604 1.2:+9257113 MS.gene015973:CDS
GTTTCCAAGCCACCAGGCAT+TGG 0.462633 1.2:+9257112 MS.gene015973:CDS
TGCTGGAGGACTGCTGCTCT+GGG 0.462826 1.2:-9255510 None:intergenic
TCGATGGATTCTGTCAAGAT+AGG 0.463592 1.2:-9257370 None:intergenic
TACGGATGCCATGATACTTT+AGG 0.463804 1.2:-9256982 None:intergenic
TTTCAAATTCCTTAACAGCC+TGG 0.465100 1.2:-9256059 None:intergenic
AAATATTCATCGACAGATGC+TGG 0.465549 1.2:-9255527 None:intergenic
AGGATTGGTGATGGCGGTGG+CGG 0.467054 1.2:-9254098 None:intergenic
TTGATCCAATCCGAAGTAGA+TGG 0.467929 1.2:-9259736 None:intergenic
TGTTTCTGTGTCTGATAAAT+GGG 0.471859 1.2:-9255351 None:intergenic
GCTGCACATGGTACAATCTT+GGG 0.476181 1.2:-9257861 None:intergenic
TTTCCGAGTATTGTGTTTCA+CGG 0.478137 1.2:-9255234 None:intergenic
CCTAGTTGTGCTTCAACTAC+AGG 0.478757 1.2:+9257169 MS.gene015973:CDS
AAGCAGCTTCCCCAAATTGT+AGG 0.478821 1.2:-9257012 None:intergenic
AATTTCAAGCTTCAGTGTGC+AGG 0.480226 1.2:+9255982 MS.gene015973:intron
GGGGTCAACGGCGGGAATGA+AGG 0.482884 1.2:-9259809 None:intergenic
CAGCGCAAGGGGTCAACGGC+GGG 0.483041 1.2:-9259817 None:intergenic
CTAATATGGTTCATCAAGAA+AGG 0.485151 1.2:+9255699 MS.gene015973:CDS
GTTGAATTCCTCAGCATCTG+TGG 0.485615 1.2:-9257434 None:intergenic
ATAAACTTAGGCTCGAGTTC+AGG 0.487680 1.2:+9255794 MS.gene015973:CDS
AGAATCCATCGACCTATATC+CGG 0.490265 1.2:+9257381 MS.gene015973:CDS
TTAACAGCCTGGATAGGATC+AGG 0.491802 1.2:-9256048 None:intergenic
CAACATTGTTGAAGAAGGGT+TGG 0.492695 1.2:+9259101 MS.gene015973:CDS
GTTTATAACAGTTGCTCAGA+AGG 0.493717 1.2:+9255460 MS.gene015973:CDS
TTTGTCCAGCCAAGGCAAGC+AGG 0.495977 1.2:+9259337 MS.gene015973:intron
TTGCCATGATTCACTTCCCC+AGG 0.497451 1.2:+9255841 MS.gene015973:CDS
GAGAGCAACATTGTTGAAGA+AGG 0.497547 1.2:+9259096 MS.gene015973:CDS
TCTCAAGAGCACATAAACTT+AGG 0.497807 1.2:+9255782 MS.gene015973:CDS
AAATGATGTATACTTGAACT+TGG 0.498024 1.2:-9254135 None:intergenic
ACAGGTGAGAGGTGATTTGC+TGG 0.503058 1.2:-9259180 None:intergenic
CGGCAAATGCACCTGATAAG+AGG 0.504086 1.2:+9257401 MS.gene015973:CDS
AAAGAGGTTGCAATTGCAAA+AGG 0.504487 1.2:+9258026 MS.gene015973:CDS
ATTGATGCCTGATCCTATCC+AGG 0.512947 1.2:+9256041 MS.gene015973:CDS
CAAATTGTAGGCAGCGTCTA+CGG 0.518260 1.2:-9257000 None:intergenic
ATCATCTAAGTTAGCGCTTG+GGG 0.519646 1.2:-9259585 None:intergenic
TACCGCATCTATTGGAGAGT+TGG 0.524893 1.2:-9259511 None:intergenic
TTGTCCAGCCAAGGCAAGCA+GGG 0.526069 1.2:+9259338 MS.gene015973:intron
TTTAAATGCAACCCAATGCC+TGG 0.526474 1.2:-9257124 None:intergenic
TTGTTCCATTTGATCATCCA+CGG 0.527357 1.2:-9255558 None:intergenic
TCCTCAGGTGGCTTGAAAAG+TGG 0.529192 1.2:+9259761 MS.gene015973:CDS
ATATTAGATTCCTCCAACAA+AGG 0.530012 1.2:-9255683 None:intergenic
CAGAGCCATCTACTTCGGAT+TGG 0.530846 1.2:+9259731 MS.gene015973:CDS
CATCTATTGGAGAGTTGGTA+TGG 0.533401 1.2:-9259506 None:intergenic
AGAAGGATTGGTGATGGCGG+TGG 0.534777 1.2:-9254101 None:intergenic
GCTGGAATCTTCTGTGGCGA+CGG 0.536040 1.2:+9257741 MS.gene015973:CDS
TTGAATTCCTCAGCATCTGT+GGG 0.538648 1.2:-9257433 None:intergenic
TACTCAGAGCATTGCAACAA+TGG 0.538876 1.2:-9259207 None:intergenic
CAGGCTAGCCTAAAGTATCA+TGG 0.540060 1.2:+9256974 MS.gene015973:intron
TTTGCTTTCACAGACTTGAT+GGG 0.542250 1.2:-9259677 None:intergenic
CCACCGTGAAACACAATACT+CGG 0.542340 1.2:+9255231 MS.gene015973:CDS
TTACCTCAGAACCATCTTGT+GGG 0.543543 1.2:-9256128 None:intergenic
GTTATAAACACCTCTGGCAG+TGG 0.544020 1.2:-9255446 None:intergenic
ACATGCTTCTAGCAATGAAA+GGG 0.544689 1.2:+9259074 MS.gene015973:CDS
TCAACCATCCTAGCACCTCC+AGG 0.545986 1.2:+9257452 MS.gene015973:CDS
AATTCCTTAACAGCCTGGAT+AGG 0.546382 1.2:-9256054 None:intergenic
GTTGCACGTCTTAGGTCCAT+TGG 0.547167 1.2:-9257591 None:intergenic
TGATCCCGTGGATGATCAAA+TGG 0.547491 1.2:+9255553 MS.gene015973:CDS
GTGACAGTTTCCAAGCCACC+AGG 0.548258 1.2:+9257106 MS.gene015973:CDS
CTCCACAGAGCCATCTACTT+CGG 0.551057 1.2:+9259726 MS.gene015973:CDS
AATGTCTTTGGCAAGAGAGA+AGG 0.551265 1.2:+9258223 MS.gene015973:CDS
AAGGCTTCTCATGCGACACA+TGG 0.551643 1.2:+9255151 MS.gene015973:CDS
ATTCTCTGAATTTACTTGTG+AGG 0.552178 1.2:-9256103 None:intergenic
ATCCATATTGGACGGAGTTG+AGG 0.552766 1.2:-9257266 None:intergenic
TTAAAATTTGATAGGAGTGA+CGG 0.554336 1.2:+9255632 MS.gene015973:CDS
CAGGTGCATTTGCCGGATAT+AGG 0.554569 1.2:-9257393 None:intergenic
CAGGTGGCTTGAAAAGTGGC+AGG 0.557391 1.2:+9259765 MS.gene015973:CDS
GGGTATTCGTGTCATTCTTG+AGG 0.561248 1.2:-9255490 None:intergenic
CCTGTAGTTGAAGCACAACT+AGG 0.562369 1.2:-9257169 None:intergenic
ATTTGTCAAAAGGCTAACGT+TGG 0.564831 1.2:+9258166 MS.gene015973:intron
CGGTATTCGCCAGTTATCTG+GGG 0.571016 1.2:+9259529 MS.gene015973:CDS
TTTGGTGCTGGAATCTTCTG+TGG 0.572134 1.2:+9257735 MS.gene015973:CDS
GGCGACGGTTGTGCTTGCGA+AGG 0.572382 1.2:+9257756 MS.gene015973:CDS
ATCTTGGGAGCAAATGCTTG+TGG 0.574082 1.2:-9257846 None:intergenic
AAAATCCTGCAACAATTGAA+GGG 0.574303 1.2:+9255735 MS.gene015973:CDS
GAATCAGCGCAAGGGGTCAA+CGG 0.575782 1.2:-9259821 None:intergenic
AACATGCTTCTAGCAATGAA+AGG 0.575833 1.2:+9259073 MS.gene015973:CDS
GATGTATACTTGAACTTGGG+GGG 0.580200 1.2:-9254131 None:intergenic
TTACCTGGGGAAGTGAATCA+TGG 0.582239 1.2:-9255844 None:intergenic
TGTTCCATTTGATCATCCAC+GGG 0.583346 1.2:-9255557 None:intergenic
CCGAGTATTGTGTTTCACGG+TGG 0.583708 1.2:-9255231 None:intergenic
GATTCTAAAGTCCTTTGCAA+TGG 0.584197 1.2:+9259839 MS.gene015973:CDS
AACGTAGGAGACAACAGTCT+TGG 0.586213 1.2:+9255383 MS.gene015973:CDS
AGAGCAACATTGTTGAAGAA+GGG 0.586625 1.2:+9259097 MS.gene015973:CDS
GACTTTAGAATCAGCGCAAG+GGG 0.586639 1.2:-9259828 None:intergenic
AGATTATCAGATGGTATACA+GGG 0.586972 1.2:+9257196 MS.gene015973:CDS
TCAGAGAATATCCCACAAGA+TGG 0.588289 1.2:+9256117 MS.gene015973:CDS
TAGACGCTGCCTACAATTTG+GGG 0.588410 1.2:+9257003 MS.gene015973:CDS
GATTGATCATCCATATTGGA+CGG 0.592859 1.2:-9257274 None:intergenic
TTCTCAACAGCCACTGCCAG+AGG 0.593800 1.2:+9255436 MS.gene015973:CDS
ATAGGATCAGGCATCAATTG+AGG 0.595329 1.2:-9256036 None:intergenic
TGACAACACCGGCATCAGCT+AGG 0.595994 1.2:+9257999 MS.gene015973:CDS
TTCTGTCAAGATAGGAGACT+CGG 0.595997 1.2:-9257362 None:intergenic
TGAATATTTGGCTGATCCCG+TGG 0.596734 1.2:+9255541 MS.gene015973:CDS
ATTTGAAAATTGCAGTGAGA+TGG 0.600065 1.2:+9256074 MS.gene015973:CDS
GTCTCCAATAAAGTCTGTCA+AGG 0.601153 1.2:+9255132 MS.gene015973:CDS
TTCATCAGAAGGATTGGTGA+TGG 0.602391 1.2:-9254107 None:intergenic
ATTACCTCAGAACCATCTTG+TGG 0.602494 1.2:-9256129 None:intergenic
GGACTTTAGAATCAGCGCAA+GGG 0.602915 1.2:-9259829 None:intergenic
ATTGAGAGTTGAGGAGAGAG+AGG 0.603653 1.2:-9254074 None:intergenic
GCAACTGTTATAAACACCTC+TGG 0.607058 1.2:-9255452 None:intergenic
AACTTAGATGATGAATCAGA+TGG 0.610248 1.2:+9259596 MS.gene015973:CDS
GGTTGTGCTTGCGAAGGCTG+TGG 0.610748 1.2:+9257762 MS.gene015973:CDS
CGAAGTAGATGGCTCTGTGG+AGG 0.611110 1.2:-9259725 None:intergenic
GTCATCATCACTAACTGAGT+CGG 0.611386 1.2:+9255598 MS.gene015973:CDS
ATGATGTATACTTGAACTTG+GGG 0.612101 1.2:-9254133 None:intergenic
TCTGTAGATGAAGAACGTGT+AGG 0.614632 1.2:-9259461 None:intergenic
AGTCCTTTGCAATGGCAATG+AGG 0.616936 1.2:+9259847 MS.gene015973:CDS
CGCGGAGACTTGAATACGAG+AGG 0.617003 1.2:-9255196 None:intergenic
GCATCAGCTAGGCACAAAAG+AGG 0.618145 1.2:+9258010 MS.gene015973:CDS
TATCCCACAAGATGGTTCTG+AGG 0.620911 1.2:+9256125 MS.gene015973:CDS
CTATTGGAGAGTTGGTATGG+TGG 0.623132 1.2:-9259503 None:intergenic
ATTGGATCAAGCTCCTCAGG+TGG 0.623354 1.2:+9259749 MS.gene015973:CDS
AATCCTCATTGCCATTGCAA+AGG 0.624686 1.2:-9259850 None:intergenic
AACAGTCTTGGTGAAGCTCG+TGG 0.625856 1.2:+9255395 MS.gene015973:CDS
AGGACTTTAGAATCAGCGCA+AGG 0.627509 1.2:-9259830 None:intergenic
TCAGCGCAAGGGGTCAACGG+CGG 0.628739 1.2:-9259818 None:intergenic
TCTTATACCATATTATTCAG+TGG 0.629452 1.2:-9257891 None:intergenic
CAAATGCACCTGATAAGAGG+AGG 0.630195 1.2:+9257404 MS.gene015973:CDS
CTTATTACTTCCAAGAACAA+CGG 0.633004 1.2:-9257035 None:intergenic
ACAAGTACTGATGATGCCAA+TGG 0.639150 1.2:+9257575 MS.gene015973:CDS
CTTCATCTACAGAAAATGAG+TGG 0.639866 1.2:+9259471 MS.gene015973:CDS
GTGAAACACAATACTCGGAA+AGG 0.645194 1.2:+9255236 MS.gene015973:CDS
AAATCCTGCAACAATTGAAG+GGG 0.646037 1.2:+9255736 MS.gene015973:CDS
AGGCTTCTCATGCGACACAT+GGG 0.646230 1.2:+9255152 MS.gene015973:CDS
GAGTATTGTGTTTCACGGTG+GGG 0.646389 1.2:-9255229 None:intergenic
AATGGAACAATCTACTGATG+CGG 0.649131 1.2:+9255571 MS.gene015973:CDS
ATCAGAAGGATTGGTGATGG+CGG 0.649908 1.2:-9254104 None:intergenic
GGTACGCCCCACAGATGCTG+AGG 0.649944 1.2:+9257426 MS.gene015973:CDS
GGTGGCGGCATTGAGAGTTG+AGG 0.650716 1.2:-9254083 None:intergenic
TCGACTGGATGTCGATGTGA+TGG 0.651749 1.2:+9258193 MS.gene015973:CDS
GAAACATCTCAATGTAACGT+AGG 0.659012 1.2:+9255368 MS.gene015973:CDS
AGTGGAACATCAGCTGCACA+TGG 0.663360 1.2:-9257873 None:intergenic
TGATGTATACTTGAACTTGG+GGG 0.665983 1.2:-9254132 None:intergenic
TACCAACTCTCCAATAGATG+CGG 0.673526 1.2:+9259509 MS.gene015973:CDS
CGGTGGGGAGCACTGATACG+CGG 0.675366 1.2:-9255214 None:intergenic
AAATGCACCTGATAAGAGGA+GGG 0.675925 1.2:+9257405 MS.gene015973:CDS
ATTTGCCGGATATAGGTCGA+TGG 0.681858 1.2:-9257386 None:intergenic
GGTATTCGCCAGTTATCTGG+GGG 0.691155 1.2:+9259530 MS.gene015973:CDS
ACAGGTGTGAGATTATCAGA+TGG 0.691185 1.2:+9257187 MS.gene015973:CDS
AAATGCAACCCAATGCCTGG+TGG 0.691964 1.2:-9257121 None:intergenic
AGATGTGAATATGACAACAC+CGG 0.696103 1.2:+9257988 MS.gene015973:CDS
TTTGCATATAGTGGAAAACG+TGG 0.696559 1.2:+9257237 MS.gene015973:CDS
TGAATTCCTCAGCATCTGTG+GGG 0.698955 1.2:-9257432 None:intergenic
ATCCGAAGTAGATGGCTCTG+TGG 0.709057 1.2:-9259728 None:intergenic
ACAATGGTGTTACAGGTGAG+AGG 0.709448 1.2:-9259191 None:intergenic
GGAGACTTGAATACGAGAGG+CGG 0.710854 1.2:-9255193 None:intergenic
GAATGTGCCAGACTGCTGCG+TGG 0.712112 1.2:-9259410 None:intergenic
GTAGTTGAAGCACAACTAGG+TGG 0.726466 1.2:-9257166 None:intergenic
TATTCATCGACAGATGCTGG+AGG 0.729564 1.2:-9255524 None:intergenic
GATTATCAGATGGTATACAG+GGG 0.764872 1.2:+9257197 MS.gene015973:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATACAATAACATAATTTT+TGG + chr1.2:9258713-9258732 MS.gene015973:intron 10.0%
!!! TATTTTAAATATTTGTCAAA+AGG + chr1.2:9258156-9258175 MS.gene015973:intron 10.0%
!! AAATTATGTTATTGTATTTC+AGG - chr1.2:9258712-9258731 None:intergenic 15.0%
!! AATTATGTTATTGTATTTCA+GGG - chr1.2:9258711-9258730 None:intergenic 15.0%
!! ACACAATAAATGAAATAAAA+TGG - chr1.2:9254341-9254360 None:intergenic 15.0%
!! ATATTTATAATGCTGATATA+GGG + chr1.2:9255891-9255910 MS.gene015973:intron 15.0%
!! TATATTTATAATGCTGATAT+AGG + chr1.2:9255890-9255909 MS.gene015973:intron 15.0%
!! TTTCACAAGAAAATAAAAAA+AGG + chr1.2:9254515-9254534 MS.gene015973:intron 15.0%
!!! AAATATCACCTAATTTTTTA+AGG - chr1.2:9257949-9257968 None:intergenic 15.0%
!!! AGAAATTTTAGAAACTAAAT+TGG - chr1.2:9258675-9258694 None:intergenic 15.0%
!!! AGCAATTTTTCTTAAATTTT+AGG + chr1.2:9258867-9258886 MS.gene015973:intron 15.0%
!!! CAATTTTTCTTAAATTTTAG+GGG + chr1.2:9258869-9258888 MS.gene015973:intron 15.0%
!!! CTTTTAGTTTTTTTAATCAT+TGG + chr1.2:9256337-9256356 MS.gene015973:intron 15.0%
!!! GAAATTTTAGAAACTAAATT+GGG - chr1.2:9258674-9258693 None:intergenic 15.0%
!!! GCAATTTTTCTTAAATTTTA+GGG + chr1.2:9258868-9258887 MS.gene015973:intron 15.0%
!!! TAATTGATTTTTTTTCTTTC+AGG + chr1.2:9256148-9256167 MS.gene015973:intron 15.0%
!!! TTTGTTTTAAAAGAAGTATT+AGG + chr1.2:9258580-9258599 MS.gene015973:intron 15.0%
!! AAAAGTCAGCAATAATTTAT+TGG + chr1.2:9256788-9256807 MS.gene015973:intron 20.0%
!! AAATAAATTCCTATAACATG+TGG - chr1.2:9258797-9258816 None:intergenic 20.0%
!! CACATTAAAATGAATACATA+TGG + chr1.2:9258770-9258789 MS.gene015973:intron 20.0%
!! CATTAAAATGCTTATCAATT+AGG + chr1.2:9254882-9254901 MS.gene015973:intron 20.0%
!! TATAAGGTTATCAATTAGAT+CGG + chr1.2:9254459-9254478 MS.gene015973:intron 20.0%
!! TATAGGAATTTATTTCAGTA+TGG + chr1.2:9258802-9258821 MS.gene015973:intron 20.0%
!! TCTTTACGATTATTATGTTA+TGG + chr1.2:9254238-9254257 MS.gene015973:intron 20.0%
!! TGGAATTATATTTGTTTGAT+TGG + chr1.2:9254789-9254808 MS.gene015973:intron 20.0%
!! TTTGCATCAAAATGAATATA+AGG + chr1.2:9254443-9254462 MS.gene015973:intron 20.0%
!!! ATAATTTTTGGTACTTCTTT+TGG + chr1.2:9258725-9258744 MS.gene015973:intron 20.0%
!!! ATTTAGAGCATATAGAAATA+TGG - chr1.2:9258102-9258121 None:intergenic 20.0%
!!! ATTTTAATGCAAAAATGAGA+CGG - chr1.2:9254871-9254890 None:intergenic 20.0%
!!! CATATGTATTCATTTTAATG+TGG - chr1.2:9258772-9258791 None:intergenic 20.0%
!!! TTTTTTAAATGCAGATTTTG+TGG + chr1.2:9259044-9259063 MS.gene015973:intron 20.0%
! AAAAAACTTAAAAGTTGTGC+TGG - chr1.2:9258401-9258420 None:intergenic 25.0%
! AAAAACTTAAAAGTTGTGCT+GGG - chr1.2:9258400-9258419 None:intergenic 25.0%
! AAAAGATTGATCATCCATAT+TGG - chr1.2:9257281-9257300 None:intergenic 25.0%
! AAACTTGATAAGCAGAAAAA+TGG - chr1.2:9256587-9256606 None:intergenic 25.0%
! AAATGATGTATACTTGAACT+TGG - chr1.2:9254138-9254157 None:intergenic 25.0%
! AACTTGATAAGCAGAAAAAT+GGG - chr1.2:9256586-9256605 None:intergenic 25.0%
! AATATTGCATTGCTCTATAT+AGG + chr1.2:9257546-9257565 MS.gene015973:intron 25.0%
! AATGATGTATACTTGAACTT+GGG - chr1.2:9254137-9254156 None:intergenic 25.0%
! AATGGAATGAAACAAAAAGT+AGG - chr1.2:9254397-9254416 None:intergenic 25.0%
! ACATCTCTAAACAAAAAAGA+CGG - chr1.2:9254957-9254976 None:intergenic 25.0%
! ATAAACAAAATCATTCAGAG+AGG - chr1.2:9256245-9256264 None:intergenic 25.0%
! ATATAGAGCAATGCAATATT+TGG - chr1.2:9257546-9257565 None:intergenic 25.0%
! ATGCAAACTTATAGAAGATT+TGG - chr1.2:9257224-9257243 None:intergenic 25.0%
! ATTGCATATCATAGAAAGTA+TGG - chr1.2:9257671-9257690 None:intergenic 25.0%
! GGGTAGCATAATTAATTAAT+TGG - chr1.2:9254171-9254190 None:intergenic 25.0%
! GTTCAAATTCTACTATGTTA+CGG + chr1.2:9254599-9254618 MS.gene015973:intron 25.0%
! GTTCATATATTATTCATCAG+AGG - chr1.2:9256185-9256204 None:intergenic 25.0%
! TACAATGCAATGTCAAATAA+CGG - chr1.2:9254627-9254646 None:intergenic 25.0%
! TCTTATACCATATTATTCAG+TGG - chr1.2:9257894-9257913 None:intergenic 25.0%
! TGACAAAATTTGTATGTATC+AGG + chr1.2:9255318-9255337 MS.gene015973:intron 25.0%
! TTAAAATTTGATAGGAGTGA+CGG + chr1.2:9255632-9255651 MS.gene015973:CDS 25.0%
! TTCTATAAGTTTGCATATAG+TGG + chr1.2:9257228-9257247 MS.gene015973:CDS 25.0%
! TTTATTGTGTTAGACATGTT+TGG + chr1.2:9254351-9254370 MS.gene015973:intron 25.0%
!! AAAATACTGTGAATGTTTTC+AGG + chr1.2:9258063-9258082 MS.gene015973:CDS 25.0%
!!! ACATGTATTTTGTTTGTACT+TGG + chr1.2:9256393-9256412 MS.gene015973:intron 25.0%
!!! TCATTGATCTAGTTTGTTTA+TGG + chr1.2:9256446-9256465 MS.gene015973:intron 25.0%
!!! TTATCAAGTTTTGCTTTGTT+TGG + chr1.2:9256596-9256615 MS.gene015973:intron 25.0%
AAAATCCTGCAACAATTGAA+GGG + chr1.2:9255735-9255754 MS.gene015973:CDS 30.0%
AACAGTCAATTATCAAAGTG+CGG - chr1.2:9254755-9254774 None:intergenic 30.0%
AACTTAGATGATGAATCAGA+TGG + chr1.2:9259596-9259615 MS.gene015973:CDS 30.0%
ACTTGATAAGCAGAAAAATG+GGG - chr1.2:9256585-9256604 None:intergenic 30.0%
AGAATATTGTTCCAGAGATA+TGG - chr1.2:9254657-9254676 None:intergenic 30.0%
AGATTATCAGATGGTATACA+GGG + chr1.2:9257196-9257215 MS.gene015973:CDS 30.0%
ATAATTGTTACAGTCAATGC+AGG + chr1.2:9256955-9256974 MS.gene015973:intron 30.0%
ATATTAGATTCCTCCAACAA+AGG - chr1.2:9255686-9255705 None:intergenic 30.0%
ATGATGTATACTTGAACTTG+GGG - chr1.2:9254136-9254155 None:intergenic 30.0%
ATTCTCTGAATTTACTTGTG+AGG - chr1.2:9256106-9256125 None:intergenic 30.0%
ATTTGAAAATTGCAGTGAGA+TGG + chr1.2:9256074-9256093 MS.gene015973:CDS 30.0%
ATTTGGTAAAACTAGCAAAC+AGG - chr1.2:9257529-9257548 None:intergenic 30.0%
CCTTATAAGGAAAATTGTTG+AGG + chr1.2:9258370-9258389 MS.gene015973:intron 30.0%
CTAATATGGTTCATCAAGAA+AGG + chr1.2:9255699-9255718 MS.gene015973:CDS 30.0%
CTTATTACTTCCAAGAACAA+CGG - chr1.2:9257038-9257057 None:intergenic 30.0%
GTTATCATGATCTTTCTCAT+AGG + chr1.2:9257484-9257503 MS.gene015973:intron 30.0%
TCCAAATACTAGTCCTTATA+AGG + chr1.2:9258357-9258376 MS.gene015973:intron 30.0%
TGATGTTCCACTGAATAATA+TGG + chr1.2:9257884-9257903 MS.gene015973:CDS 30.0%
TGGGTTAATTAACATAAGAG+AGG - chr1.2:9254846-9254865 None:intergenic 30.0%
TTTAACGAAATTAGCAGAAG+TGG + chr1.2:9256497-9256516 MS.gene015973:intron 30.0%
TTTGTTGGAGGAATCTAATA+TGG + chr1.2:9255685-9255704 MS.gene015973:CDS 30.0%
! AGACAATGTTGTTTGATGAA+TGG - chr1.2:9254415-9254434 None:intergenic 30.0%
! ATGTTTCTGTGTCTGATAAA+TGG - chr1.2:9255355-9255374 None:intergenic 30.0%
! CCTCAACAATTTTCCTTATA+AGG - chr1.2:9258373-9258392 None:intergenic 30.0%
! CTAAATACTAGTCTCTTTAG+AGG + chr1.2:9256290-9256309 MS.gene015973:intron 30.0%
! GCAATAATTTATTGGCTACA+AGG + chr1.2:9256796-9256815 MS.gene015973:intron 30.0%
! GTGTTGACAAATCTCAAAAA+GGG - chr1.2:9255109-9255128 None:intergenic 30.0%
! TCCTTATAAGGACTAGTATT+TGG - chr1.2:9258361-9258380 None:intergenic 30.0%
! TGTTTCTGTGTCTGATAAAT+GGG - chr1.2:9255354-9255373 None:intergenic 30.0%
!! AAATTCACTAGACTTGCTTT+TGG + chr1.2:9254815-9254834 MS.gene015973:intron 30.0%
!! AGTGTTGACAAATCTCAAAA+AGG - chr1.2:9255110-9255129 None:intergenic 30.0%
!! CATGATAACTAACTTTTTCC+TGG - chr1.2:9257473-9257492 None:intergenic 30.0%
!! CATTTCTAGTATCACGAAAA+AGG + chr1.2:9255041-9255060 MS.gene015973:intron 30.0%
!! GCATTATTTCTGCATAAGAT+AGG + chr1.2:9256526-9256545 MS.gene015973:intron 30.0%
!! TAAATTTTAGGGGTTCAAAC+TGG + chr1.2:9258879-9258898 MS.gene015973:intron 30.0%
!!! AGAGTTGCATTTTGATTATC+AGG + chr1.2:9256882-9256901 MS.gene015973:intron 30.0%
AAAGAGGTTGCAATTGCAAA+AGG + chr1.2:9258026-9258045 MS.gene015973:CDS 35.0%
AAATATTCATCGACAGATGC+TGG - chr1.2:9255530-9255549 None:intergenic 35.0%
AAATCCTGCAACAATTGAAG+GGG + chr1.2:9255736-9255755 MS.gene015973:CDS 35.0%
AACAAAATCATTCAGAGAGG+AGG - chr1.2:9256242-9256261 None:intergenic 35.0%
AACATGCTTCTAGCAATGAA+AGG + chr1.2:9259073-9259092 MS.gene015973:CDS 35.0%
AACTTCAAGCAACGCAAAAA+TGG + chr1.2:9257078-9257097 MS.gene015973:CDS 35.0%
AATGGAACAATCTACTGATG+CGG + chr1.2:9255571-9255590 MS.gene015973:CDS 35.0%
ACAAAATCATTCAGAGAGGA+GGG - chr1.2:9256241-9256260 None:intergenic 35.0%
ACAATTGAAGGGGAGAAAAA+TGG + chr1.2:9255746-9255765 MS.gene015973:CDS 35.0%
ACATATGGTCCACATGTTAT+AGG + chr1.2:9258785-9258804 MS.gene015973:intron 35.0%
ACATGCTTCTAGCAATGAAA+GGG + chr1.2:9259074-9259093 MS.gene015973:CDS 35.0%
ACTCTGTCTGTCTTTATGTT+TGG + chr1.2:9254293-9254312 MS.gene015973:intron 35.0%
AGAGCAACATTGTTGAAGAA+GGG + chr1.2:9259097-9259116 MS.gene015973:CDS 35.0%
AGATGTGAATATGACAACAC+CGG + chr1.2:9257988-9258007 MS.gene015973:CDS 35.0%
AGCATCTGTCGATGAATATT+TGG + chr1.2:9255529-9255548 MS.gene015973:CDS 35.0%
AGTTCTTCTGCTATGTTACT+AGG - chr1.2:9255659-9255678 None:intergenic 35.0%
ATATTCACATCTTCCTGCAA+AGG - chr1.2:9257980-9257999 None:intergenic 35.0%
ATTTGCTTTCACAGACTTGA+TGG - chr1.2:9259681-9259700 None:intergenic 35.0%
ATTTGTCAAAAGGCTAACGT+TGG + chr1.2:9258166-9258185 MS.gene015973:intron 35.0%
CTTCATCTACAGAAAATGAG+TGG + chr1.2:9259471-9259490 MS.gene015973:CDS 35.0%
CTTGATAAGCAGAAAAATGG+GGG - chr1.2:9256584-9256603 None:intergenic 35.0%
GAAAATCCTGCAACAATTGA+AGG + chr1.2:9255734-9255753 MS.gene015973:CDS 35.0%
GAAACATCTCAATGTAACGT+AGG + chr1.2:9255368-9255387 MS.gene015973:CDS 35.0%
GACAGAAAATTGTGACAATC+AGG + chr1.2:9259142-9259161 MS.gene015973:CDS 35.0%
GAGATTATCAGATGGTATAC+AGG + chr1.2:9257195-9257214 MS.gene015973:CDS 35.0%
GATATTACATCATGGACTCA+AGG + chr1.2:9256689-9256708 MS.gene015973:intron 35.0%
GATCAATCAAAAGAGACTAG+AGG - chr1.2:9255957-9255976 None:intergenic 35.0%
GATGGATGTATGAATGTCTT+TGG + chr1.2:9258211-9258230 MS.gene015973:CDS 35.0%
GATTATCAGATGGTATACAG+GGG + chr1.2:9257197-9257216 MS.gene015973:CDS 35.0%
GATTGATCATCCATATTGGA+CGG - chr1.2:9257277-9257296 None:intergenic 35.0%
GTACTGTGCTCTTCTTTAAT+TGG - chr1.2:9256375-9256394 None:intergenic 35.0%
GTGTAATGGCATTATCTACT+TGG + chr1.2:9256848-9256867 MS.gene015973:intron 35.0%
GTTTATAACAGTTGCTCAGA+AGG + chr1.2:9255460-9255479 MS.gene015973:CDS 35.0%
GTTTGGAGGTTTCAAAATTG+TGG + chr1.2:9256613-9256632 MS.gene015973:intron 35.0%
TATAGTTGACATCCACATGA+GGG + chr1.2:9258975-9258994 MS.gene015973:intron 35.0%
TCTTGTGAAAACTCAGTATC+CGG - chr1.2:9254505-9254524 None:intergenic 35.0%
TGAAACACCTGATGTATTGA+AGG + chr1.2:9259643-9259662 MS.gene015973:CDS 35.0%
TGAGAGACTAAACTGAAAGT+TGG + chr1.2:9258913-9258932 MS.gene015973:intron 35.0%
TGAGTCCATGATGTAATATC+AGG - chr1.2:9256689-9256708 None:intergenic 35.0%
TGATGTATACTTGAACTTGG+GGG - chr1.2:9254135-9254154 None:intergenic 35.0%
TGATTCTTAGATCCTTAGAC+CGG + chr1.2:9254483-9254502 MS.gene015973:intron 35.0%
TGGTAACAGAGTAGAATTTC+AGG + chr1.2:9257782-9257801 MS.gene015973:CDS 35.0%
TGTACTGAATACCATATCTC+TGG + chr1.2:9254643-9254662 MS.gene015973:intron 35.0%
TTCTTAATCTGAGAAGCTTC+TGG - chr1.2:9254040-9254059 None:intergenic 35.0%
TTGATAAGCAGAAAAATGGG+GGG - chr1.2:9256583-9256602 None:intergenic 35.0%
TTGTTCCATTTGATCATCCA+CGG - chr1.2:9255561-9255580 None:intergenic 35.0%
TTTCAAATTCCTTAACAGCC+TGG - chr1.2:9256062-9256081 None:intergenic 35.0%
TTTGCTTTCACAGACTTGAT+GGG - chr1.2:9259680-9259699 None:intergenic 35.0%
TTTGTATGTATCAGGCTTGA+AGG + chr1.2:9255326-9255345 MS.gene015973:intron 35.0%
! AAATGCAGATTTTGTGGCAA+TGG + chr1.2:9259050-9259069 MS.gene015973:intron 35.0%
! ACTAAAAGTGTATTCAAGCC+TGG - chr1.2:9256325-9256344 None:intergenic 35.0%
! AGAAGAACTTTTGCCTTTGT+TGG + chr1.2:9255670-9255689 MS.gene015973:CDS 35.0%
! TCTCAAGAGCACATAAACTT+AGG + chr1.2:9255782-9255801 MS.gene015973:CDS 35.0%
! TGCAGTTACTGTGATTGTTT+TGG + chr1.2:9257717-9257736 MS.gene015973:intron 35.0%
! TTTCCGAGTATTGTGTTTCA+CGG - chr1.2:9255237-9255256 None:intergenic 35.0%
! TTTGCATATAGTGGAAAACG+TGG + chr1.2:9257237-9257256 MS.gene015973:CDS 35.0%
!! ACACAGTTTAACTTGTTGTC+TGG + chr1.2:9258291-9258310 MS.gene015973:intron 35.0%
!! CCTGCTAGCCTTAAAAAATT+AGG + chr1.2:9257938-9257957 MS.gene015973:intron 35.0%
!! CTACAAGGTTTTAGTCATGT+AGG + chr1.2:9256811-9256830 MS.gene015973:intron 35.0%
!! GATAACTAACTTTTTCCTGG+AGG - chr1.2:9257470-9257489 None:intergenic 35.0%
!! GATTCTAAAGTCCTTTGCAA+TGG + chr1.2:9259839-9259858 MS.gene015973:CDS 35.0%
!!! CCTAATTTTTTAAGGCTAGC+AGG - chr1.2:9257941-9257960 None:intergenic 35.0%
!!! GCGTGGTTTTTTAGAAGATT+TGG - chr1.2:9259396-9259415 None:intergenic 35.0%
!!! TATTTTGATGTGACCTTTGC+AGG + chr1.2:9257964-9257983 MS.gene015973:intron 35.0%
!!! TCAAGTTTTGCTTTGTTTGG+AGG + chr1.2:9256599-9256618 MS.gene015973:intron 35.0%
AAAACTCAGTATCCGGTCTA+AGG - chr1.2:9254498-9254517 None:intergenic 40.0%
AAATGCACCTGATAAGAGGA+GGG + chr1.2:9257405-9257424 MS.gene015973:CDS 40.0%
AACACAGCACTGTCAAATAG+TGG - chr1.2:9254692-9254711 None:intergenic 40.0%
AATCCTCATTGCCATTGCAA+AGG - chr1.2:9259853-9259872 None:intergenic 40.0%
AATGCAAAAATGAGACGGTG+TGG - chr1.2:9254866-9254885 None:intergenic 40.0%
AATGTCTTTGGCAAGAGAGA+AGG + chr1.2:9258223-9258242 MS.gene015973:CDS 40.0%
AATTCCTTAACAGCCTGGAT+AGG - chr1.2:9256057-9256076 None:intergenic 40.0%
AATTTCAAGCTTCAGTGTGC+AGG + chr1.2:9255982-9256001 MS.gene015973:intron 40.0%
ACAGGTGTGAGATTATCAGA+TGG + chr1.2:9257187-9257206 MS.gene015973:CDS 40.0%
ACATCATGGACTCAAGGTTA+AGG + chr1.2:9256695-9256714 MS.gene015973:intron 40.0%
AGAATCCATCGACCTATATC+CGG + chr1.2:9257381-9257400 MS.gene015973:CDS 40.0%
ATAAACTTAGGCTCGAGTTC+AGG + chr1.2:9255794-9255813 MS.gene015973:CDS 40.0%
ATAGGATCAGGCATCAATTG+AGG - chr1.2:9256039-9256058 None:intergenic 40.0%
ATCATCTAAGTTAGCGCTTG+GGG - chr1.2:9259588-9259607 None:intergenic 40.0%
ATGAGACTACAGTGGTGTAA+TGG + chr1.2:9256834-9256853 MS.gene015973:intron 40.0%
ATGCAAAAATGAGACGGTGT+GGG - chr1.2:9254865-9254884 None:intergenic 40.0%
ATTACCTCAGAACCATCTTG+TGG - chr1.2:9256132-9256151 None:intergenic 40.0%
ATTAGGCGTATGTGCATTGT+CGG + chr1.2:9254899-9254918 MS.gene015973:intron 40.0%
CAACATTGTTGAAGAAGGGT+TGG + chr1.2:9259101-9259120 MS.gene015973:CDS 40.0%
CATCATCTAAGTTAGCGCTT+GGG - chr1.2:9259589-9259608 None:intergenic 40.0%
CATCATGGACTCAAGGTTAA+GGG + chr1.2:9256696-9256715 MS.gene015973:intron 40.0%
CGAGTCCTGATATTACATCA+TGG + chr1.2:9256681-9256700 MS.gene015973:intron 40.0%
CTTGTCGTCTTCTTCATTTC+AGG + chr1.2:9255078-9255097 MS.gene015973:intron 40.0%
GAAGCCTTGACAGACTTTAT+TGG - chr1.2:9255139-9255158 None:intergenic 40.0%
GAAGCTTCCTTCAATACATC+AGG - chr1.2:9259653-9259672 None:intergenic 40.0%
GAGAGCAACATTGTTGAAGA+AGG + chr1.2:9259096-9259115 MS.gene015973:CDS 40.0%
GATGTATACTTGAACTTGGG+GGG - chr1.2:9254134-9254153 None:intergenic 40.0%
GCAACTGTTATAAACACCTC+TGG - chr1.2:9255455-9255474 None:intergenic 40.0%
GCTGTGTTCATGTACTTAAG+AGG + chr1.2:9254704-9254723 MS.gene015973:intron 40.0%
GTATAGTTGACATCCACATG+AGG + chr1.2:9258974-9258993 MS.gene015973:intron 40.0%
GTCATCATCACTAACTGAGT+CGG + chr1.2:9255598-9255617 MS.gene015973:CDS 40.0%
GTCTCCAATAAAGTCTGTCA+AGG + chr1.2:9255132-9255151 MS.gene015973:CDS 40.0%
GTGAAACACAATACTCGGAA+AGG + chr1.2:9255236-9255255 MS.gene015973:CDS 40.0%
TACCAACTCTCCAATAGATG+CGG + chr1.2:9259509-9259528 MS.gene015973:CDS 40.0%
TACGGATGCCATGATACTTT+AGG - chr1.2:9256985-9257004 None:intergenic 40.0%
TACTGGCAGCATAAAGCAAA+GGG - chr1.2:9258526-9258545 None:intergenic 40.0%
TCAGAGAATATCCCACAAGA+TGG + chr1.2:9256117-9256136 MS.gene015973:CDS 40.0%
TCATCATCTAAGTTAGCGCT+TGG - chr1.2:9259590-9259609 None:intergenic 40.0%
TCTGTAGATGAAGAACGTGT+AGG - chr1.2:9259464-9259483 None:intergenic 40.0%
TGTCAAGAACCCCAATCAAA+GGG - chr1.2:9254195-9254214 None:intergenic 40.0%
TGTTCCATTTGATCATCCAC+GGG - chr1.2:9255560-9255579 None:intergenic 40.0%
TTAATCAATGTTGTCCGTCG+TGG + chr1.2:9254556-9254575 MS.gene015973:intron 40.0%
TTACCTCAGAACCATCTTGT+GGG - chr1.2:9256131-9256150 None:intergenic 40.0%
TTACTGGCAGCATAAAGCAA+AGG - chr1.2:9258527-9258546 None:intergenic 40.0%
TTCTGTCAAGATAGGAGACT+CGG - chr1.2:9257365-9257384 None:intergenic 40.0%
TTCTTACAGTTGCACGTCTT+AGG - chr1.2:9257602-9257621 None:intergenic 40.0%
TTGAATTCCTCAGCATCTGT+GGG - chr1.2:9257436-9257455 None:intergenic 40.0%
TTGATCCAATCCGAAGTAGA+TGG - chr1.2:9259739-9259758 None:intergenic 40.0%
TTGCAATGGCAATGAGGATT+CGG + chr1.2:9259853-9259872 MS.gene015973:CDS 40.0%
TTGGCTGGACAAATGCAAAA+AGG - chr1.2:9259330-9259349 None:intergenic 40.0%
TTTAAATGCAACCCAATGCC+TGG - chr1.2:9257127-9257146 None:intergenic 40.0%
! ACTGTTGTGAGAGACTTGTT+TGG + chr1.2:9254769-9254788 MS.gene015973:intron 40.0%
! AGAACTTTTGCCTTTGTTGG+AGG + chr1.2:9255673-9255692 MS.gene015973:CDS 40.0%
! AGCAAATGCTTGTGGATTAC+GGG - chr1.2:9257841-9257860 None:intergenic 40.0%
! CTACTGAAGCATCAGTTTCA+TGG - chr1.2:9257324-9257343 None:intergenic 40.0%
! CTTTAGAGGTTAATGACTCC+AGG + chr1.2:9256304-9256323 MS.gene015973:intron 40.0%
! GAGCAAATGCTTGTGGATTA+CGG - chr1.2:9257842-9257861 None:intergenic 40.0%
! GGAGAAAAATGGTGCTGAAT+TGG + chr1.2:9255757-9255776 MS.gene015973:CDS 40.0%
! GGAGAAACTCTCTTTTGGAT+TGG - chr1.2:9259707-9259726 None:intergenic 40.0%
! GTCCTTTCATTTGTGCTGAT+TGG + chr1.2:9259304-9259323 MS.gene015973:intron 40.0%
! TCGATGGATTCTGTCAAGAT+AGG - chr1.2:9257373-9257392 None:intergenic 40.0%
! TTCATCAGAAGGATTGGTGA+TGG - chr1.2:9254110-9254129 None:intergenic 40.0%
! TTTTTGCATTTGTCCAGCCA+AGG + chr1.2:9259329-9259348 MS.gene015973:intron 40.0%
!! ACAAGTACTGATGATGCCAA+TGG + chr1.2:9257575-9257594 MS.gene015973:CDS 40.0%
!! CATCTATTGGAGAGTTGGTA+TGG - chr1.2:9259509-9259528 None:intergenic 40.0%
!! CATTGCAACAATGGTGTTAC+AGG - chr1.2:9259201-9259220 None:intergenic 40.0%
!! CTATTTTTCGCAATCCACGA+CGG - chr1.2:9254573-9254592 None:intergenic 40.0%
!! TAAGGGCATCTCGTAGAATA+AGG + chr1.2:9256713-9256732 MS.gene015973:intron 40.0%
!! TACTCAGAGCATTGCAACAA+TGG - chr1.2:9259210-9259229 None:intergenic 40.0%
!!! TACTGTGATTGTTTTGGTGC+TGG + chr1.2:9257723-9257742 MS.gene015973:CDS 40.0%
AACGTAGGAGACAACAGTCT+TGG + chr1.2:9255383-9255402 MS.gene015973:CDS 45.0%
AAGCAGCTTCCCCAAATTGT+AGG - chr1.2:9257015-9257034 None:intergenic 45.0%
AAGTTAGCGCTTGGGGTAAT+CGG - chr1.2:9259581-9259600 None:intergenic 45.0%
ACAGCAAGAGCTTAGTTACC+TGG - chr1.2:9255862-9255881 None:intergenic 45.0%
ACCATCTCTAGCATTCTACC+TGG - chr1.2:9258480-9258499 None:intergenic 45.0%
ACTGGCAGCATAAAGCAAAG+GGG - chr1.2:9258525-9258544 None:intergenic 45.0%
ACTTAAAAGTTGTGCTGGGC+TGG - chr1.2:9258396-9258415 None:intergenic 45.0%
AGCAAGAGCTTAGTTACCTG+GGG - chr1.2:9255860-9255879 None:intergenic 45.0%
AGCTGCACATGGTACAATCT+TGG - chr1.2:9257865-9257884 None:intergenic 45.0%
AGTCCTTTGCAATGGCAATG+AGG + chr1.2:9259847-9259866 MS.gene015973:CDS 45.0%
ATCCATATTGGACGGAGTTG+AGG - chr1.2:9257269-9257288 None:intergenic 45.0%
ATCCTCAACTCCGTCCAATA+TGG + chr1.2:9257264-9257283 MS.gene015973:CDS 45.0%
ATCTTGGGAGCAAATGCTTG+TGG - chr1.2:9257849-9257868 None:intergenic 45.0%
ATGGCCATTTGCATGCATCA+TGG + chr1.2:9256465-9256484 MS.gene015973:intron 45.0%
ATTGAGAGTTGAGGAGAGAG+AGG - chr1.2:9254077-9254096 None:intergenic 45.0%
ATTGATGCCTGATCCTATCC+AGG + chr1.2:9256041-9256060 MS.gene015973:CDS 45.0%
ATTTGCCGGATATAGGTCGA+TGG - chr1.2:9257389-9257408 None:intergenic 45.0%
CAAATGCACCTGATAAGAGG+AGG + chr1.2:9257404-9257423 MS.gene015973:CDS 45.0%
CAAATTGTAGGCAGCGTCTA+CGG - chr1.2:9257003-9257022 None:intergenic 45.0%
CAGCAAGAGCTTAGTTACCT+GGG - chr1.2:9255861-9255880 None:intergenic 45.0%
CATGTAGGATGAGACTACAG+TGG + chr1.2:9256826-9256845 MS.gene015973:intron 45.0%
CCACCGTGAAACACAATACT+CGG + chr1.2:9255231-9255250 MS.gene015973:CDS 45.0%
CCTAGTTGTGCTTCAACTAC+AGG + chr1.2:9257169-9257188 MS.gene015973:CDS 45.0%
CCTGTAGTTGAAGCACAACT+AGG - chr1.2:9257172-9257191 None:intergenic 45.0%
CTCTTATCAGGTGCATTTGC+CGG - chr1.2:9257403-9257422 None:intergenic 45.0%
GCTGCACATGGTACAATCTT+GGG - chr1.2:9257864-9257883 None:intergenic 45.0%
GCTGCCAGTAATAATCTCTG+CGG + chr1.2:9258536-9258555 MS.gene015973:intron 45.0%
GGCCAATCAGCACAAATGAA+AGG - chr1.2:9259309-9259328 None:intergenic 45.0%
GTAGACGCTGCCTACAATTT+GGG + chr1.2:9257002-9257021 MS.gene015973:CDS 45.0%
GTAGTTGAAGCACAACTAGG+TGG - chr1.2:9257169-9257188 None:intergenic 45.0%
GTCAAGAACCCCAATCAAAG+GGG - chr1.2:9254194-9254213 None:intergenic 45.0%
GTGTCAAGAACCCCAATCAA+AGG - chr1.2:9254196-9254215 None:intergenic 45.0%
GTTATAAACACCTCTGGCAG+TGG - chr1.2:9255449-9255468 None:intergenic 45.0%
GTTGAATTCCTCAGCATCTG+TGG - chr1.2:9257437-9257456 None:intergenic 45.0%
TAAAAAACCACGCAGCAGTC+TGG + chr1.2:9259403-9259422 MS.gene015973:CDS 45.0%
TACCGCATCTATTGGAGAGT+TGG - chr1.2:9259514-9259533 None:intergenic 45.0%
TAGACGCTGCCTACAATTTG+GGG + chr1.2:9257003-9257022 MS.gene015973:CDS 45.0%
TATTCATCGACAGATGCTGG+AGG - chr1.2:9255527-9255546 None:intergenic 45.0%
TCAAGAACCCCAATCAAAGG+GGG - chr1.2:9254193-9254212 None:intergenic 45.0%
TCCAGGTAGAATGCTAGAGA+TGG + chr1.2:9258476-9258495 MS.gene015973:intron 45.0%
TCTAGCATTCTACCTGGACT+TGG - chr1.2:9258474-9258493 None:intergenic 45.0%
TGAATATTTGGCTGATCCCG+TGG + chr1.2:9255541-9255560 MS.gene015973:CDS 45.0%
TGAATTCCTCAGCATCTGTG+GGG - chr1.2:9257435-9257454 None:intergenic 45.0%
TGATCCCGTGGATGATCAAA+TGG + chr1.2:9255553-9255572 MS.gene015973:CDS 45.0%
TGATCCTATCCAGGCTGTTA+AGG + chr1.2:9256050-9256069 MS.gene015973:CDS 45.0%
TGCAATGGCAATGAGGATTC+GGG + chr1.2:9259854-9259873 MS.gene015973:CDS 45.0%
TGCACCGCAGAGATTATTAC+TGG - chr1.2:9258543-9258562 None:intergenic 45.0%
TGGCCATTTGCATGCATCAT+GGG + chr1.2:9256466-9256485 MS.gene015973:intron 45.0%
TTAACAGCCTGGATAGGATC+AGG - chr1.2:9256051-9256070 None:intergenic 45.0%
TTACCTGGGGAAGTGAATCA+TGG - chr1.2:9255847-9255866 None:intergenic 45.0%
TTCTCCCCTTCAATTGTTGC+AGG - chr1.2:9255743-9255762 None:intergenic 45.0%
! CGAGTATTGTGTTTCACGGT+GGG - chr1.2:9255233-9255252 None:intergenic 45.0%
! GAGTATTGTGTTTCACGGTG+GGG - chr1.2:9255232-9255251 None:intergenic 45.0%
! GGGTATTCGTGTCATTCTTG+AGG - chr1.2:9255493-9255512 None:intergenic 45.0%
! GTGGAGGAGAAACTCTCTTT+TGG - chr1.2:9259712-9259731 None:intergenic 45.0%
! TAATCTCTGCGGTGCACTTT+TGG + chr1.2:9258547-9258566 MS.gene015973:intron 45.0%
! TATCCCACAAGATGGTTCTG+AGG + chr1.2:9256125-9256144 MS.gene015973:CDS 45.0%
! TTTTACGCACTTGTGCGTTG+TGG + chr1.2:9254727-9254746 MS.gene015973:intron 45.0%
!! ACAATGGTGTTACAGGTGAG+AGG - chr1.2:9259194-9259213 None:intergenic 45.0%
!! AGGACTTTAGAATCAGCGCA+AGG - chr1.2:9259833-9259852 None:intergenic 45.0%
!! ATCAGAAGGATTGGTGATGG+CGG - chr1.2:9254107-9254126 None:intergenic 45.0%
!! CAGGCTAGCCTAAAGTATCA+TGG + chr1.2:9256974-9256993 MS.gene015973:intron 45.0%
!! CTATTGGAGAGTTGGTATGG+TGG - chr1.2:9259506-9259525 None:intergenic 45.0%
!! GACTTTAGAATCAGCGCAAG+GGG - chr1.2:9259831-9259850 None:intergenic 45.0%
!! GCAAAGGGGTGTCATTTGTA+TGG - chr1.2:9258511-9258530 None:intergenic 45.0%
!! GGACTTTAGAATCAGCGCAA+GGG - chr1.2:9259832-9259851 None:intergenic 45.0%
!! TAGGGTTTGAGTTGAGGTTC+TGG - chr1.2:9258444-9258463 None:intergenic 45.0%
!! TTTGGTGCTGGAATCTTCTG+TGG + chr1.2:9257735-9257754 MS.gene015973:CDS 45.0%
!!! AACTTTTTCCTGGAGGTGCT+AGG - chr1.2:9257463-9257482 None:intergenic 45.0%
!! AATTTATATTAAAATTTGAT+AGG + chr1.2:9255624-9255643 MS.gene015973:CDS 5.0%
AAATGCAACCCAATGCCTGG+TGG - chr1.2:9257124-9257143 None:intergenic 50.0%
AACAGTCTTGGTGAAGCTCG+TGG + chr1.2:9255395-9255414 MS.gene015973:CDS 50.0%
AAGAACCCCAATCAAAGGGG+GGG - chr1.2:9254191-9254210 None:intergenic 50.0%
AAGGCTTCTCATGCGACACA+TGG + chr1.2:9255151-9255170 MS.gene015973:CDS 50.0%
ACATCCACATGAGGGAAGAG+TGG + chr1.2:9258983-9259002 MS.gene015973:intron 50.0%
ACTTGGGGGGATTCATCAGA+AGG - chr1.2:9254121-9254140 None:intergenic 50.0%
AGCATTCTACCTGGACTTGG+TGG - chr1.2:9258471-9258490 None:intergenic 50.0%
AGGCTTCTCATGCGACACAT+GGG + chr1.2:9255152-9255171 MS.gene015973:CDS 50.0%
AGTGGAACATCAGCTGCACA+TGG - chr1.2:9257876-9257895 None:intergenic 50.0%
ATGCTACCCCCCCTTTGATT+GGG + chr1.2:9254182-9254201 MS.gene015973:intron 50.0%
ATTGGATCAAGCTCCTCAGG+TGG + chr1.2:9259749-9259768 MS.gene015973:CDS 50.0%
CAAGAACCCCAATCAAAGGG+GGG - chr1.2:9254192-9254211 None:intergenic 50.0%
CAGAGCCATCTACTTCGGAT+TGG + chr1.2:9259731-9259750 MS.gene015973:CDS 50.0%
CAGGTGCATTTGCCGGATAT+AGG - chr1.2:9257396-9257415 None:intergenic 50.0%
CATCCACATGAGGGAAGAGT+GGG + chr1.2:9258984-9259003 MS.gene015973:intron 50.0%
CATGCGACACATGGGTTTCT+CGG + chr1.2:9255160-9255179 MS.gene015973:CDS 50.0%
CCATTTGCATGCATCATGGG+AGG + chr1.2:9256469-9256488 MS.gene015973:intron 50.0%
CCTCCCATGATGCATGCAAA+TGG - chr1.2:9256472-9256491 None:intergenic 50.0%
CGGCAAATGCACCTGATAAG+AGG + chr1.2:9257401-9257420 MS.gene015973:CDS 50.0%
CGGTATTCGCCAGTTATCTG+GGG + chr1.2:9259529-9259548 MS.gene015973:CDS 50.0%
CGTAGACGCTGCCTACAATT+TGG + chr1.2:9257001-9257020 MS.gene015973:CDS 50.0%
CTCCACAGAGCCATCTACTT+CGG + chr1.2:9259726-9259745 MS.gene015973:CDS 50.0%
CTGGCGAATACCGCATCTAT+TGG - chr1.2:9259522-9259541 None:intergenic 50.0%
GAAGCTGCTTCCGTTGTTCT+TGG + chr1.2:9257025-9257044 MS.gene015973:CDS 50.0%
GCATCAGCTAGGCACAAAAG+AGG + chr1.2:9258010-9258029 MS.gene015973:CDS 50.0%
GCGGTATTCGCCAGTTATCT+GGG + chr1.2:9259528-9259547 MS.gene015973:CDS 50.0%
GGAGACTTGAATACGAGAGG+CGG - chr1.2:9255196-9255215 None:intergenic 50.0%
GGGGGATTCATCAGAAGGAT+TGG - chr1.2:9254116-9254135 None:intergenic 50.0%
GGTATTCGCCAGTTATCTGG+GGG + chr1.2:9259530-9259549 MS.gene015973:CDS 50.0%
GTTGCACGTCTTAGGTCCAT+TGG - chr1.2:9257594-9257613 None:intergenic 50.0%
TATGCTACCCCCCCTTTGAT+TGG + chr1.2:9254181-9254200 MS.gene015973:intron 50.0%
TCCTCAGGTGGCTTGAAAAG+TGG + chr1.2:9259761-9259780 MS.gene015973:CDS 50.0%
TCGACTGGATGTCGATGTGA+TGG + chr1.2:9258193-9258212 MS.gene015973:CDS 50.0%
TGCGGTATTCGCCAGTTATC+TGG + chr1.2:9259527-9259546 MS.gene015973:CDS 50.0%
TTGCCATGATTCACTTCCCC+AGG + chr1.2:9255841-9255860 MS.gene015973:CDS 50.0%
TTTCCAAGCCACCAGGCATT+GGG + chr1.2:9257113-9257132 MS.gene015973:CDS 50.0%
! ACAGGTGAGAGGTGATTTGC+TGG - chr1.2:9259183-9259202 None:intergenic 50.0%
! ATCCGAAGTAGATGGCTCTG+TGG - chr1.2:9259731-9259750 None:intergenic 50.0%
! CCGAGTATTGTGTTTCACGG+TGG - chr1.2:9255234-9255253 None:intergenic 50.0%
! CTTTTGTGCCTAGCTGATGC+CGG - chr1.2:9258010-9258029 None:intergenic 50.0%
!! ATTCTACCTGGACTTGGTGG+TGG - chr1.2:9258468-9258487 None:intergenic 50.0%
!! GGTGCACTTTTGGAAGTGGT+GGG + chr1.2:9258557-9258576 MS.gene015973:intron 50.0%
!! TTCTACCTGGACTTGGTGGT+GGG - chr1.2:9258467-9258486 None:intergenic 50.0%
!!! TTTTCCTGGAGGTGCTAGGA+TGG - chr1.2:9257459-9257478 None:intergenic 50.0%
ACTTTGCACCCTGCTTGCCT+TGG - chr1.2:9259349-9259368 None:intergenic 55.0%
CAGGTGGCTTGAAAAGTGGC+AGG + chr1.2:9259765-9259784 MS.gene015973:CDS 55.0%
CGCGGAGACTTGAATACGAG+AGG - chr1.2:9255199-9255218 None:intergenic 55.0%
GAAGAGAGCCCCCAGATAAC+TGG - chr1.2:9259541-9259560 None:intergenic 55.0%
GAATCAGCGCAAGGGGTCAA+CGG - chr1.2:9259824-9259843 None:intergenic 55.0%
GCGTATGTGCATTGTCGGAC+TGG + chr1.2:9254904-9254923 MS.gene015973:intron 55.0%
GCTAACGTTGGATGCTCGAC+TGG + chr1.2:9258178-9258197 MS.gene015973:CDS 55.0%
GCTGGAATCTTCTGTGGCGA+CGG + chr1.2:9257741-9257760 MS.gene015973:CDS 55.0%
GTGACAGTTTCCAAGCCACC+AGG + chr1.2:9257106-9257125 MS.gene015973:CDS 55.0%
GTTTCCAAGCCACCAGGCAT+TGG + chr1.2:9257112-9257131 MS.gene015973:CDS 55.0%
TATCTGGGGGCTCTCTTCGT+TGG + chr1.2:9259543-9259562 MS.gene015973:CDS 55.0%
TCAACCATCCTAGCACCTCC+AGG + chr1.2:9257452-9257471 MS.gene015973:CDS 55.0%
TGACAACACCGGCATCAGCT+AGG + chr1.2:9257999-9258018 MS.gene015973:CDS 55.0%
TGCTACCCCCCCTTTGATTG+GGG + chr1.2:9254183-9254202 MS.gene015973:intron 55.0%
TTCTCAACAGCCACTGCCAG+AGG + chr1.2:9255436-9255455 MS.gene015973:CDS 55.0%
TTGTCCAGCCAAGGCAAGCA+GGG + chr1.2:9259338-9259357 MS.gene015973:intron 55.0%
TTTGTCCAGCCAAGGCAAGC+AGG + chr1.2:9259337-9259356 MS.gene015973:intron 55.0%
! CGAAGTAGATGGCTCTGTGG+AGG - chr1.2:9259728-9259747 None:intergenic 55.0%
! CGGATTGGATCAAGCTCCTC+AGG + chr1.2:9259746-9259765 MS.gene015973:CDS 55.0%
!! AGAAGGATTGGTGATGGCGG+TGG - chr1.2:9254104-9254123 None:intergenic 55.0%
!! CGGTGCACTTTTGGAAGTGG+TGG + chr1.2:9258556-9258575 MS.gene015973:intron 55.0%
!! CTGCGGTGCACTTTTGGAAG+TGG + chr1.2:9258553-9258572 MS.gene015973:intron 55.0%
!! GGTGGGTAGGGTTTGAGTTG+AGG - chr1.2:9258450-9258469 None:intergenic 55.0%
!!! GCCACTTTTCAAGCCACCTG+AGG - chr1.2:9259765-9259784 None:intergenic 55.0%
ATGCTGGAGGACTGCTGCTC+TGG - chr1.2:9255514-9255533 None:intergenic 60.0%
CAACCCAATGCCTGGTGGCT+TGG - chr1.2:9257119-9257138 None:intergenic 60.0%
GAATGTGCCAGACTGCTGCG+TGG - chr1.2:9259413-9259432 None:intergenic 60.0%
GCACCCACTCTTCCCTCATG+TGG - chr1.2:9258990-9259009 None:intergenic 60.0%
GGGCGTACCCTCCTCTTATC+AGG - chr1.2:9257415-9257434 None:intergenic 60.0%
GGTTGTGCTTGCGAAGGCTG+TGG + chr1.2:9257762-9257781 MS.gene015973:CDS 60.0%
TGCTGGAGGACTGCTGCTCT+GGG - chr1.2:9255513-9255532 None:intergenic 60.0%
! GGTGGCGGCATTGAGAGTTG+AGG - chr1.2:9254086-9254105 None:intergenic 60.0%
!! ACCTGGACTTGGTGGTGGGT+AGG - chr1.2:9258463-9258482 None:intergenic 60.0%
!! AGGATTGGTGATGGCGGTGG+CGG - chr1.2:9254101-9254120 None:intergenic 60.0%
!! CCTGGACTTGGTGGTGGGTA+GGG - chr1.2:9258462-9258481 None:intergenic 60.0%
CCCTACCCACCACCAAGTCC+AGG + chr1.2:9258459-9258478 MS.gene015973:intron 65.0%
GGCGACGGTTGTGCTTGCGA+AGG + chr1.2:9257756-9257775 MS.gene015973:CDS 65.0%
GGGGTCAACGGCGGGAATGA+AGG - chr1.2:9259812-9259831 None:intergenic 65.0%
GGTACGCCCCACAGATGCTG+AGG + chr1.2:9257426-9257445 MS.gene015973:CDS 65.0%
TCAGCGCAAGGGGTCAACGG+CGG - chr1.2:9259821-9259840 None:intergenic 65.0%
TGCACCCTGCTTGCCTTGGC+TGG - chr1.2:9259345-9259364 None:intergenic 65.0%
!! CGGTGGGGAGCACTGATACG+CGG - chr1.2:9255217-9255236 None:intergenic 65.0%
CAGCGCAAGGGGTCAACGGC+GGG - chr1.2:9259820-9259839 None:intergenic 70.0%
GGGGGCTCTCTTCGTTGGCG+CGG + chr1.2:9259548-9259567 MS.gene015973:CDS 70.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 9254028 9259901 9254028 ID=MS.gene015973
chr1.2 mRNA 9254028 9259901 9254028 ID=MS.gene015973.t1;Parent=MS.gene015973
chr1.2 exon 9254028 9254144 9254028 ID=MS.gene015973.t1.exon1;Parent=MS.gene015973.t1
chr1.2 CDS 9254028 9254144 9254028 ID=cds.MS.gene015973.t1;Parent=MS.gene015973.t1
chr1.2 exon 9255100 9255257 9255100 ID=MS.gene015973.t1.exon2;Parent=MS.gene015973.t1
chr1.2 CDS 9255100 9255257 9255100 ID=cds.MS.gene015973.t1;Parent=MS.gene015973.t1
chr1.2 exon 9255340 9255862 9255340 ID=MS.gene015973.t1.exon3;Parent=MS.gene015973.t1
chr1.2 CDS 9255340 9255862 9255340 ID=cds.MS.gene015973.t1;Parent=MS.gene015973.t1
chr1.2 exon 9255997 9256146 9255997 ID=MS.gene015973.t1.exon4;Parent=MS.gene015973.t1
chr1.2 CDS 9255997 9256146 9255997 ID=cds.MS.gene015973.t1;Parent=MS.gene015973.t1
chr1.2 exon 9256977 9257479 9256977 ID=MS.gene015973.t1.exon5;Parent=MS.gene015973.t1
chr1.2 CDS 9256977 9257479 9256977 ID=cds.MS.gene015973.t1;Parent=MS.gene015973.t1
chr1.2 exon 9257568 9257639 9257568 ID=MS.gene015973.t1.exon6;Parent=MS.gene015973.t1
chr1.2 CDS 9257568 9257639 9257568 ID=cds.MS.gene015973.t1;Parent=MS.gene015973.t1
chr1.2 exon 9257722 9257905 9257722 ID=MS.gene015973.t1.exon7;Parent=MS.gene015973.t1
chr1.2 CDS 9257722 9257905 9257722 ID=cds.MS.gene015973.t1;Parent=MS.gene015973.t1
chr1.2 exon 9257986 9258084 9257986 ID=MS.gene015973.t1.exon8;Parent=MS.gene015973.t1
chr1.2 CDS 9257986 9258084 9257986 ID=cds.MS.gene015973.t1;Parent=MS.gene015973.t1
chr1.2 exon 9258178 9258244 9258178 ID=MS.gene015973.t1.exon9;Parent=MS.gene015973.t1
chr1.2 CDS 9258178 9258244 9258178 ID=cds.MS.gene015973.t1;Parent=MS.gene015973.t1
chr1.2 exon 9259058 9259226 9259058 ID=MS.gene015973.t1.exon10;Parent=MS.gene015973.t1
chr1.2 CDS 9259058 9259226 9259058 ID=cds.MS.gene015973.t1;Parent=MS.gene015973.t1
chr1.2 exon 9259346 9259901 9259346 ID=MS.gene015973.t1.exon11;Parent=MS.gene015973.t1
chr1.2 CDS 9259346 9259901 9259346 ID=cds.MS.gene015973.t1;Parent=MS.gene015973.t1
Gene Sequence

>MS.gene015973

ATGGATTCTCCAGAAGCTTCTCAGATTAAGAACATTTCTTCTTCTTCCTCTCTCTCCTCAACTCTCAATGCCGCCACCGCCATCACCAATCCTTCTGATGAATCCCCCCAAGTTCAAGTATACATCATTTCATTTTCATACCAATTAATTAATTATGCTACCCCCCCTTTGATTGGGGTTCTTGACACGATTTTCGAGTTTAATTCTTCTTCTTTACGATTATTATGTTATGGAACTTCATCATGATATGATACTATCAATGTTAACTCTGTCTGTCTTTATGTTTGGAATCTAATCTAATGAATTTATACCATTTTATTTCATTTATTGTGTTAGACATGTTTGGAATTACATTTGTTTTCGATGCCTACTTTTTGTTTCATTCCATTCATCAAACAACATTGTCTCTTCTTTTTTTGCATCAAAATGAATATAAGGTTATCAATTAGATCGGTTGATTCTTAGATCCTTAGACCGGATACTGAGTTTTCACAAGAAAATAAAAAAAGGTTATCTATTAAGTAAGTTTTAATCAATGTTGTCCGTCGTGGATTGCGAAAAATAGCATTTTGTTCAAATTCTACTATGTTACGGCGCCGTTATTTGACATTGCATTGTACTGAATACCATATCTCTGGAACAATATTCTGCTACACTATAGCCACTATTTGACAGTGCTGTGTTCATGTACTTAAGAGGTTTTACGCACTTGTGCGTTGTGGTGCCGCACTTTGATAATTGACTGTTGTGAGAGACTTGTTTGGAATTATATTTGTTTGATTGGATAAAATTCACTAGACTTGCTTTTGGTCTATCCTCTCTTATGTTAATTAACCCACACCGTCTCATTTTTGCATTAAAATGCTTATCAATTAGGCGTATGTGCATTGTCGGACTGGTATCTTGTGTTGATTGTGTTTCTAGAACCGTCTTTTTTGTTTAGAGATGTCTAGACTAGAGAGTTGTGTATTATTTTTGTTGACTTGTGTAGTATTTTTCAGACTCTTTCATTTCATTTCTAGTATCACGAAAAAGGAATGAAATTTACATCTTGTCGTCTTCTTCATTTCAGGAATCTCCCTTTTTGAGATTTGTCAACACTCTGTCTCCAATAAAGTCTGTCAAGGCTTCTCATGCGACACATGGGTTTCTCGGACTCAATTCTCCGCCTCTCGTATTCAAGTCTCCGCGTATCAGTGCTCCCCACCGTGAAACACAATACTCGGAAAGGTTTGTGACTTCAATTTTGTGTTCGTGTCTTTTGTTATTGACGATGCGCTTGCTGTTTATTGACAAAATTTGTATGTATCAGGCTTGAAGGTACCCATTTATCAGACACAGAAACATCTCAATGTAACGTAGGAGACAACAGTCTTGGTGAAGCTCGTGGTGATCTGAAGAAATTGAATTCTCAACAGCCACTGCCAGAGGTGTTTATAACAGTTGCTCAGAAGGATTTTGACCTCAAGAATGACACGAATACCCAGAGCAGCAGTCCTCCAGCATCTGTCGATGAATATTTGGCTGATCCCGTGGATGATCAAATGGAACAATCTACTGATGCGGTTGAGTCATCATCACTAACTGAGTCGGAGAAATTTATATTAAAATTTGATAGGAGTGACGGTCCTAGTAACATAGCAGAAGAACTTTTGCCTTTGTTGGAGGAATCTAATATGGTTCATCAAGAAAGGACAACATATGTTGAAAATCCTGCAACAATTGAAGGGGAGAAAAATGGTGCTGAATTGGTTTCTCAAGAGCACATAAACTTAGGCTCGAGTTCAGGTGCAGATGTTTTTGATAAACAATATTGCCATGATTCACTTCCCCAGGTAACTAAGCTCTTGCTGTCTATACTCTATATTTATAATGCTGATATAGGGACGTCAGTTTTCATATATATGATTAGTGTGAGCTAGATGTCCTCTAGTCTCTTTTGATTGATCTATAAAATTTCAAGCTTCAGTGTGCAGGAAATGATCAACAGCATCAAAGTGACTGTGCACCTCAATTGATGCCTGATCCTATCCAGGCTGTTAAGGAATTTGAAAATTGCAGTGAGATGGTGTCATCCTCACAAGTAAATTCAGAGAATATCCCACAAGATGGTTCTGAGGTAATTGATTTTTTTTCTTTCAGGTTTATTGCATTCCTCTGATGAATAATATATGAACTTTTGTTTAGATTTTGCTGTCTTTTCATGCTTTCCCTCCTCTCTGAATGATTTTGTTTATGTCTGTGTTCTTTTAGTCTTTAACACTAAATACTAGTCTCTTTAGAGGTTAATGACTCCAGGCTTGAATACACTTTTAGTTTTTTTAATCATTGGCATCTATTATCTCCAATTAAAGAAGAGCACAGTACATGTATTTTGTTTGTACTTGGCACACTCAATCTTATAAATCTAATAATGCTTCATTGATCTAGTTTGTTTATGGCCATTTGCATGCATCATGGGAGGATTTTTTTAACGAAATTAGCAGAAGTGGTATACTGCATTATTTCTGCATAAGATAGGTGCTGTAATCAGATTTCTCTAACTAAAAAATCCCCCCATTTTTCTGCTTATCAAGTTTTGCTTTGTTTGGAGGTTTCAAAATTGTGGATCTCTGATAAATACAGTTTTTTCAACAAGATTGCTAATAAAATGCGAGTCCTGATATTACATCATGGACTCAAGGTTAAGGGCATCTCGTAGAATAAGGAAGTCAGTCTTCTGTTTATGAATATATAGCATGAAATATCTTTTGAACAAAGAAAAGTCAGCAATAATTTATTGGCTACAAGGTTTTAGTCATGTAGGATGAGACTACAGTGGTGTAATGGCATTATCTACTTGGCAATCATACACAGAGTTGCATTTTGATTATCAGGAACTTGCATTTTATTGTTCAATTAAATGAAGATTTTCTTTCTGCAATATAATAATTGTTACAGTCAATGCAGGCTAGCCTAAAGTATCATGGCATCCGTAGACGCTGCCTACAATTTGGGGAAGCTGCTTCCGTTGTTCTTGGAAGTAATAAGTCTCATGTGAAATTGAATACAACTTCAAGCAACGCAAAAATGGTTTCTGTGACAGTTTCCAAGCCACCAGGCATTGGGTTGCATTTAAATAGCATTATAAATGCAATGCCACCTAGTTGTGCTTCAACTACAGGTGTGAGATTATCAGATGGTATACAGGGGTCCAAATCTTCTATAAGTTTGCATATAGTGGAAAACGTGGCAAGATCCTCAACTCCGTCCAATATGGATGATCAATCTTTTATTGATACTAAGAATGAGAGCCATGAAACTGATGCTTCAGTAGTTGCAGATTCTTTCATTTCCGAGTCTCCTATCTTGACAGAATCCATCGACCTATATCCGGCAAATGCACCTGATAAGAGGAGGGTACGCCCCACAGATGCTGAGGAATTCAACCATCCTAGCACCTCCAGGAAAAAGTTAGTTATCATGATCTTTCTCATAGGTCATTATTTTTATTCTTTACCTGTTTGCTAGTTTTACCAAATATTGCATTGCTCTATATAGGAAGAAAACAAGTACTGATGATGCCAATGGACCTAAGACGTGCAACTGTAAGAAGAGTAAATGTTTGAAACTGTGAGTATATTTTAAATATGTTTTGATACCATACTTTCTATGATATGCAATATCTATGTATTTTGATTTGAGTACTTTGCAGTTACTGTGATTGTTTTGGTGCTGGAATCTTCTGTGGCGACGGTTGTGCTTGCGAAGGCTGTGGTAACAGAGTAGAATTTCAGGATAAAGTTGTTGAAACAAAACAGCAAATTGAATCCCGTAATCCACAAGCATTTGCTCCCAAGATTGTACCATGTGCAGCTGATGTTCCACTGAATAATATGGTATAAGATCTTCATATATTACTGTTGTTCAACCTGCTAGCCTTAAAAAATTAGGTGATATTTTGATGTGACCTTTGCAGGAAGATGTGAATATGACAACACCGGCATCAGCTAGGCACAAAAGAGGTTGCAATTGCAAAAGGTCAAAGTGTACAAAAAAATACTGTGAATGTTTTCAGGTTGTGTATTTTATCCATATTTCTATATGCTCTAAATATTTTTACTGTGTCTGCTAATATATTTTTTATTTTATTTTAAATATTTGTCAAAAGGCTAACGTTGGATGCTCGACTGGATGTCGATGTGATGGATGTATGAATGTCTTTGGCAAGAGAGAAGGTTAGAGCTCATAGTATGAATAGCTATTTTAAATACTTAATGCACTACACAGTTTAACTTGTTGTCTGGTCAGTATAAATGTTATGGATTGATGTTGGGAGGTTTTGATGTTTCCAAATACTAGTCCTTATAAGGAAAATTGTTGAGGCCAGCCCAGCACAACTTTTAAGTTTTTTAATGATGTGTAGATTTGAATCCAGAACCTCAACTCAAACCCTACCCACCACCAAGTCCAGGTAGAATGCTAGAGATGGTCATATTTGCCATACAAATGACACCCCTTTGCTTTATGCTGCCAGTAATAATCTCTGCGGTGCACTTTTGGAAGTGGTGGGTTTGTTTTAAAAGAAGTATTAGGTCTCGCGAACTTATGAATTGAATCAATTACGATTAAATAACTTTTTAGTGTTTCTAATGTACACTATTCCCAATTTAGTTTCTAAAATTTCTAGTTGATTTCAATCCCTGAAATACAATAACATAATTTTTGGTACTTCTTTTGGTTTGAGTTCTTGTAACTTTGTCCACATTAAAATGAATACATATGGTCCACATGTTATAGGAATTTATTTCAGTATGGACAAATATTTTGAAAAACTAAATTAAAAGAATGAAAATCAAAAGCAATTTTTCTTAAATTTTAGGGGTTCAAACTGGCTAGAATTTCTTGAGAGACTAAACTGAAAGTTGGTGTGAATTACAGAGACTAGAATTATTTTAGCTTTTAAAGTATAGTTGACATCCACATGAGGGAAGAGTGGGTGCAGATCATTAAATGTTTCTGTTAATGTATTACACATTTTTTAAATGCAGATTTTGTGGCAATGGAACATGCTTCTAGCAATGAAAGGGAGAGCAACATTGTTGAAGAAGGGTTGGATGACAAACTGCACAAAAGACAGAAAATTGTGACAATCAGGACAGACTTGTTACGACCAGCAAATCACCTCTCACCTGTAACACCATTGTTGCAATGCTCTGAGTAAGATTGCTTACACTGCAAGTTTTTCTATGTTGTATAAATAAGAAGTTATATTCTGAGTATTTAATTATTTTGATGTCCTTTCATTTGTGCTGATTGGCCTTTTTGCATTTGTCCAGCCAAGGCAAGCAGGGTGCAAAGTCTAGACATACTTCTGCAAATTTGACCAAATCTTCTAAAAAACCACGCAGCAGTCTGGCACATTCGAAGTCGAATGATTCTCAAAAGAATGCACCTACACGTTCTTCATCTACAGAAAATGAGTGGATAGATCTTCCACCATACCAACTCTCCAATAGATGCGGTATTCGCCAGTTATCTGGGGGCTCTCTTCGTTGGCGCGGTAGTTCACCGATTACCCCAAGCGCTAACTTAGATGATGAATCAGATGGTAAGCTCTTTGACATTATAGAAGATGAAACACCTGATGTATTGAAGGAAGCTTCAACTCCCATCAAGTCTGTGAAAGCAAATTCTCCAATCCAAAAGAGAGTTTCTCCTCCACAGAGCCATCTACTTCGGATTGGATCAAGCTCCTCAGGTGGCTTGAAAAGTGGCAGGAAATTTATATTGCAATCTGTTCCTTCATTCCCGCCGTTGACCCCTTGCGCTGATTCTAAAGTCCTTTGCAATGGCAATGAGGATTCGGGTAACAGCACAGATAAAGTGACATAA
Protein sequence

>MS.gene015973.t1

MDSPEASQIKNISSSSSLSSTLNAATAITNPSDESPQVQESPFLRFVNTLSPIKSVKASHATHGFLGLNSPPLVFKSPRISAPHRETQYSERLEGTHLSDTETSQCNVGDNSLGEARGDLKKLNSQQPLPEVFITVAQKDFDLKNDTNTQSSSPPASVDEYLADPVDDQMEQSTDAVESSSLTESEKFILKFDRSDGPSNIAEELLPLLEESNMVHQERTTYVENPATIEGEKNGAELVSQEHINLGSSSGADVFDKQYCHDSLPQCAGNDQQHQSDCAPQLMPDPIQAVKEFENCSEMVSSSQVNSENIPQDGSEASLKYHGIRRRCLQFGEAASVVLGSNKSHVKLNTTSSNAKMVSVTVSKPPGIGLHLNSIINAMPPSCASTTGVRLSDGIQGSKSSISLHIVENVARSSTPSNMDDQSFIDTKNESHETDASVVADSFISESPILTESIDLYPANAPDKRRVRPTDAEEFNHPSTSRKKKKTSTDDANGPKTCNCKKSKCLKLYCDCFGAGIFCGDGCACEGCGNRVEFQDKVVETKQQIESRNPQAFAPKIVPCAADVPLNNMEDVNMTTPASARHKRGCNCKRSKCTKKYCECFQANVGCSTGCRCDGCMNVFGKREDFVAMEHASSNERESNIVEEGLDDKLHKRQKIVTIRTDLLRPANHLSPVTPLLQCSDQGKQGAKSRHTSANLTKSSKKPRSSLAHSKSNDSQKNAPTRSSSTENEWIDLPPYQLSNRCGIRQLSGGSLRWRGSSPITPSANLDDESDGKLFDIIEDETPDVLKEASTPIKSVKANSPIQKRVSPPQSHLLRIGSSSSGGLKSGRKFILQSVPSFPPLTPCADSKVLCNGNEDSGNSTDKVT