Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016009.t1 | XP_024626731.1 | 73.4 | 654 | 23 | 2 | 148 | 650 | 1 | 654 | 5.80E-263 | 916.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016009.t1 | Q9SZL8 | 33.2 | 566 | 359 | 8 | 2 | 561 | 62 | 614 | 1.5e-89 | 332.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016009.t1 | A0A396GJD5 | 72.1 | 562 | 153 | 1 | 1 | 562 | 1 | 558 | 1.3e-240 | 842.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene016009.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016009.t1 | MTR_6g051425 | 85.757 | 337 | 36 | 2 | 1 | 331 | 1 | 331 | 0.0 | 592 |
| MS.gene016009.t1 | MTR_3g465760 | 97.143 | 70 | 2 | 0 | 40 | 109 | 1 | 70 | 7.84e-42 | 145 |
| MS.gene016009.t1 | MTR_4g035820 | 29.819 | 332 | 197 | 11 | 18 | 333 | 76 | 387 | 6.45e-32 | 132 |
| MS.gene016009.t1 | MTR_0558s0020 | 31.076 | 251 | 154 | 6 | 22 | 255 | 41 | 289 | 1.72e-29 | 119 |
| MS.gene016009.t1 | MTR_1g070355 | 32.051 | 234 | 149 | 5 | 25 | 255 | 82 | 308 | 5.12e-29 | 122 |
| MS.gene016009.t1 | MTR_2g039370 | 69.231 | 78 | 20 | 1 | 49 | 126 | 98 | 171 | 1.98e-28 | 115 |
| MS.gene016009.t1 | MTR_6g090505 | 31.579 | 209 | 121 | 4 | 64 | 255 | 21 | 224 | 8.03e-25 | 107 |
| MS.gene016009.t1 | MTR_8g446020 | 31.731 | 208 | 124 | 5 | 61 | 255 | 47 | 249 | 3.71e-24 | 102 |
| MS.gene016009.t1 | MTR_7g446480 | 32.941 | 170 | 114 | 0 | 105 | 274 | 149 | 318 | 4.71e-24 | 103 |
| MS.gene016009.t1 | MTR_7g446520 | 28.185 | 259 | 160 | 4 | 25 | 280 | 96 | 331 | 1.07e-23 | 103 |
| MS.gene016009.t1 | MTR_7g446510 | 32.544 | 169 | 114 | 0 | 105 | 273 | 164 | 332 | 1.52e-22 | 99.8 |
| MS.gene016009.t1 | MTR_1g083640 | 27.948 | 229 | 146 | 5 | 22 | 233 | 56 | 282 | 2.66e-20 | 92.0 |
| MS.gene016009.t1 | MTR_1g013060 | 26.636 | 214 | 146 | 5 | 13 | 222 | 23 | 229 | 7.58e-19 | 86.7 |
| MS.gene016009.t1 | MTR_5g076070 | 25.551 | 227 | 163 | 4 | 25 | 250 | 61 | 282 | 3.90e-18 | 85.5 |
| MS.gene016009.t1 | MTR_0402s0040 | 28.161 | 174 | 107 | 6 | 29 | 195 | 38 | 200 | 1.80e-14 | 76.6 |
| MS.gene016009.t1 | MTR_3g450850 | 24.609 | 256 | 171 | 6 | 17 | 263 | 47 | 289 | 2.39e-14 | 75.5 |
| MS.gene016009.t1 | MTR_6g022070 | 32.867 | 143 | 92 | 2 | 316 | 458 | 1 | 139 | 2.69e-14 | 75.1 |
| MS.gene016009.t1 | MTR_2g014100 | 30.049 | 203 | 123 | 7 | 22 | 205 | 49 | 251 | 2.72e-13 | 70.9 |
| MS.gene016009.t1 | MTR_1g008290 | 26.316 | 114 | 83 | 1 | 105 | 218 | 32 | 144 | 5.97e-13 | 67.0 |
| MS.gene016009.t1 | MTR_0337s0040 | 26.374 | 182 | 116 | 4 | 61 | 229 | 48 | 224 | 1.11e-11 | 65.5 |
| MS.gene016009.t1 | MTR_2g098920 | 31.579 | 114 | 70 | 3 | 11 | 124 | 77 | 182 | 5.62e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016009.t1 | AT4G38180 | 33.925 | 563 | 359 | 8 | 2 | 561 | 62 | 614 | 2.58e-105 | 337 |
| MS.gene016009.t1 | AT4G15090 | 30.699 | 544 | 357 | 9 | 25 | 561 | 59 | 589 | 2.95e-82 | 276 |
| MS.gene016009.t1 | AT4G15090 | 30.699 | 544 | 357 | 9 | 25 | 561 | 59 | 589 | 2.95e-82 | 276 |
| MS.gene016009.t1 | AT4G15090 | 30.699 | 544 | 357 | 9 | 25 | 561 | 59 | 589 | 2.95e-82 | 276 |
| MS.gene016009.t1 | AT4G15090 | 30.699 | 544 | 357 | 9 | 25 | 561 | 59 | 589 | 2.95e-82 | 276 |
| MS.gene016009.t1 | AT4G15090 | 30.699 | 544 | 357 | 9 | 25 | 561 | 59 | 589 | 2.95e-82 | 276 |
| MS.gene016009.t1 | AT2G27110 | 29.596 | 544 | 347 | 8 | 19 | 561 | 51 | 559 | 6.81e-81 | 273 |
| MS.gene016009.t1 | AT2G27110 | 29.596 | 544 | 347 | 8 | 19 | 561 | 51 | 559 | 6.81e-81 | 273 |
| MS.gene016009.t1 | AT3G06250 | 29.004 | 562 | 343 | 11 | 2 | 561 | 177 | 684 | 6.32e-74 | 253 |
| MS.gene016009.t1 | AT3G06250 | 29.004 | 562 | 343 | 11 | 2 | 561 | 177 | 684 | 6.32e-74 | 253 |
| MS.gene016009.t1 | AT3G06250 | 29.004 | 562 | 343 | 11 | 2 | 561 | 177 | 684 | 6.32e-74 | 253 |
| MS.gene016009.t1 | AT2G27110 | 34.400 | 375 | 241 | 4 | 188 | 561 | 44 | 414 | 2.05e-72 | 248 |
| MS.gene016009.t1 | AT1G76320 | 28.942 | 539 | 362 | 10 | 25 | 561 | 5 | 524 | 2.67e-71 | 244 |
| MS.gene016009.t1 | AT3G22170 | 28.957 | 556 | 345 | 11 | 20 | 558 | 73 | 595 | 3.27e-71 | 247 |
| MS.gene016009.t1 | AT3G22170 | 28.957 | 556 | 345 | 11 | 20 | 558 | 73 | 595 | 3.27e-71 | 247 |
| MS.gene016009.t1 | AT1G76320 | 28.942 | 539 | 362 | 10 | 25 | 561 | 5 | 524 | 9.83e-71 | 243 |
| MS.gene016009.t1 | AT1G76320 | 28.942 | 539 | 362 | 10 | 25 | 561 | 5 | 524 | 1.23e-70 | 243 |
| MS.gene016009.t1 | AT1G76320 | 28.942 | 539 | 362 | 10 | 25 | 561 | 5 | 524 | 1.23e-70 | 243 |
| MS.gene016009.t1 | AT4G19990 | 28.007 | 582 | 355 | 11 | 1 | 561 | 1 | 539 | 3.79e-67 | 234 |
| MS.gene016009.t1 | AT4G19990 | 28.007 | 582 | 355 | 11 | 1 | 561 | 1 | 539 | 4.35e-67 | 234 |
| MS.gene016009.t1 | AT4G19990 | 28.007 | 582 | 355 | 11 | 1 | 561 | 1 | 539 | 4.35e-67 | 234 |
| MS.gene016009.t1 | AT5G18960 | 28.393 | 560 | 345 | 12 | 5 | 561 | 202 | 708 | 5.44e-67 | 234 |
| MS.gene016009.t1 | AT5G18960 | 28.393 | 560 | 345 | 12 | 5 | 561 | 202 | 708 | 5.44e-67 | 234 |
| MS.gene016009.t1 | AT4G19990 | 28.007 | 582 | 355 | 11 | 1 | 561 | 1 | 539 | 8.37e-67 | 234 |
| MS.gene016009.t1 | AT4G19990 | 28.007 | 582 | 355 | 11 | 1 | 561 | 1 | 539 | 8.37e-67 | 234 |
| MS.gene016009.t1 | AT4G19990 | 28.028 | 578 | 352 | 11 | 5 | 561 | 19 | 553 | 1.86e-66 | 233 |
| MS.gene016009.t1 | AT4G19990 | 28.803 | 493 | 304 | 8 | 74 | 561 | 32 | 482 | 9.51e-63 | 221 |
| MS.gene016009.t1 | AT1G52520 | 27.240 | 558 | 380 | 7 | 10 | 561 | 81 | 618 | 4.51e-62 | 219 |
| MS.gene016009.t1 | AT1G10240 | 29.286 | 560 | 353 | 15 | 18 | 558 | 49 | 584 | 7.95e-60 | 213 |
| MS.gene016009.t1 | AT1G10240 | 29.286 | 560 | 353 | 15 | 18 | 558 | 49 | 584 | 7.95e-60 | 213 |
| MS.gene016009.t1 | AT1G80010 | 26.944 | 553 | 378 | 10 | 20 | 558 | 98 | 638 | 2.27e-58 | 209 |
| MS.gene016009.t1 | AT5G28530 | 26.678 | 566 | 371 | 11 | 18 | 562 | 56 | 598 | 4.69e-58 | 207 |
| MS.gene016009.t1 | AT5G28530 | 26.678 | 566 | 371 | 11 | 18 | 562 | 56 | 598 | 4.69e-58 | 207 |
| MS.gene016009.t1 | AT5G28530 | 27.018 | 570 | 368 | 12 | 18 | 562 | 56 | 602 | 1.63e-57 | 206 |
| MS.gene016009.t1 | AT4G38170 | 29.508 | 366 | 250 | 5 | 199 | 562 | 21 | 380 | 2.09e-57 | 203 |
| MS.gene016009.t1 | AT2G32250 | 25.741 | 540 | 350 | 8 | 20 | 558 | 41 | 530 | 1.14e-54 | 199 |
| MS.gene016009.t1 | AT2G32250 | 25.556 | 540 | 351 | 8 | 20 | 558 | 41 | 530 | 1.98e-54 | 199 |
| MS.gene016009.t1 | AT2G32250 | 25.556 | 540 | 351 | 8 | 20 | 558 | 41 | 530 | 1.98e-54 | 199 |
| MS.gene016009.t1 | AT2G32250 | 25.556 | 540 | 351 | 8 | 20 | 558 | 41 | 530 | 1.98e-54 | 199 |
| MS.gene016009.t1 | AT2G32250 | 25.556 | 540 | 351 | 8 | 20 | 558 | 41 | 530 | 2.25e-54 | 199 |
| MS.gene016009.t1 | AT2G32250 | 25.556 | 540 | 351 | 8 | 20 | 558 | 41 | 530 | 2.25e-54 | 199 |
| MS.gene016009.t1 | AT2G32250 | 25.607 | 535 | 347 | 8 | 25 | 558 | 5 | 489 | 2.34e-54 | 199 |
| MS.gene016009.t1 | AT2G32250 | 25.794 | 535 | 346 | 8 | 25 | 558 | 5 | 489 | 2.46e-54 | 199 |
| MS.gene016009.t1 | AT5G28530 | 23.339 | 557 | 338 | 13 | 18 | 562 | 56 | 535 | 7.59e-32 | 131 |
| MS.gene016009.t1 | AT5G28530 | 23.708 | 561 | 335 | 14 | 18 | 562 | 56 | 539 | 2.04e-31 | 130 |
Find 107 sgRNAs with CRISPR-Local
Find 160 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGAATGCACCTTCTCATTT+TGG | 0.108203 | 1.4:-8288573 | MS.gene016009:CDS |
| ACTAATGTTTGGAGTTATTT+AGG | 0.178667 | 1.4:-8289119 | MS.gene016009:CDS |
| AGGGTTATCATTCCTCAAAT+TGG | 0.230210 | 1.4:-8287149 | MS.gene016009:CDS |
| TGTATAAAATTCGTCATAAA+TGG | 0.250035 | 1.4:-8288410 | MS.gene016009:CDS |
| CATAAACGGTGACATGTATT+TGG | 0.254781 | 1.4:+8288612 | None:intergenic |
| AAAAGTTTCATGGTTTGTTT+TGG | 0.257014 | 1.4:-8288533 | MS.gene016009:CDS |
| AACTCTGATCAAAAGTTTCA+TGG | 0.276945 | 1.4:-8288543 | MS.gene016009:CDS |
| CCATCTTGAAGCCATGTTCT+TGG | 0.280191 | 1.4:+8289486 | None:intergenic |
| CACATGTAACTCATTGATTC+AGG | 0.282301 | 1.4:-8287076 | MS.gene016009:intron |
| AATGTTCCTTCTACTTCTTT+TGG | 0.283406 | 1.4:-8287271 | MS.gene016009:CDS |
| ACTACCACATGTTTCTTATT+AGG | 0.296197 | 1.4:+8288018 | None:intergenic |
| CACGTTTAACCAATGTGTTT+TGG | 0.307246 | 1.4:-8288917 | MS.gene016009:CDS |
| GGGTTATCATTCCTCAAATT+GGG | 0.312307 | 1.4:-8287148 | MS.gene016009:CDS |
| GCGAATTACTAAGTTGATAA+TGG | 0.317295 | 1.4:-8289258 | MS.gene016009:CDS |
| GAAAAGAGTAAATTAATTAA+AGG | 0.318587 | 1.4:-8289029 | MS.gene016009:CDS |
| AAAGTTGATTATGATTGTTT+TGG | 0.323388 | 1.4:-8288879 | MS.gene016009:CDS |
| CATTGGTTAAACGTGATTCT+TGG | 0.328206 | 1.4:+8288925 | None:intergenic |
| AAACTTCTGTTTCTTTCAAT+TGG | 0.330619 | 1.4:-8288734 | MS.gene016009:CDS |
| ATTGTTCTTAAACCCTTGTT+TGG | 0.337062 | 1.4:+8289385 | None:intergenic |
| CATGTCACCGTTTATGCTTA+TGG | 0.342415 | 1.4:-8288605 | MS.gene016009:CDS |
| ACTAAGATGTTACAAGGAAT+TGG | 0.345022 | 1.4:-8287099 | MS.gene016009:CDS |
| CTTATTAGCATTTGAAAAGA+TGG | 0.359804 | 1.4:-8288271 | MS.gene016009:CDS |
| TCACCTACGATTTCTCCTTC+TGG | 0.371892 | 1.4:+8289359 | None:intergenic |
| GCAAGTGATTGATTAAAGAT+TGG | 0.373633 | 1.4:+8288997 | None:intergenic |
| TTGTCGAAAGTTTGATTCAA+TGG | 0.378573 | 1.4:-8287962 | MS.gene016009:CDS |
| CCCATCCATGGAAGAACTAA+TGG | 0.382474 | 1.4:+8287330 | None:intergenic |
| CAAGTGATTGATTAAAGATT+GGG | 0.384672 | 1.4:+8288998 | None:intergenic |
| GTATGAAAGTTACTAATGTT+TGG | 0.386893 | 1.4:-8289130 | MS.gene016009:CDS |
| AGACTTTATGAGACCTCCTT+TGG | 0.388927 | 1.4:+8289166 | None:intergenic |
| CAAGTAGTGCTTTCCAAGAT+AGG | 0.389222 | 1.4:-8286958 | MS.gene016009:CDS |
| TCCATTAGTTCTTCCATGGA+TGG | 0.401531 | 1.4:-8287331 | MS.gene016009:CDS |
| AGGAGGTCTCATAAAGTCTA+TGG | 0.403748 | 1.4:-8289162 | MS.gene016009:CDS |
| GAAGTACTTCTAAAGACATT+GGG | 0.403994 | 1.4:-8288086 | MS.gene016009:CDS |
| TAACATCTTAGTAAATGAAA+TGG | 0.407933 | 1.4:+8287110 | None:intergenic |
| AAAACAATCATAATCAACTT+TGG | 0.409741 | 1.4:+8288881 | None:intergenic |
| ACTTAGACTGGTTGCTGCTC+CGG | 0.416105 | 1.4:+8288299 | None:intergenic |
| CATTTGCAAAATGTCATGTT+TGG | 0.424549 | 1.4:-8288777 | MS.gene016009:CDS |
| CATAACGTCTCCGATTGCTT+TGG | 0.425284 | 1.4:+8288635 | None:intergenic |
| AATGAGTATCTTGCTGGAAC+TGG | 0.425528 | 1.4:-8288111 | MS.gene016009:CDS |
| CTATCTTGGAAAGCACTACT+TGG | 0.431144 | 1.4:+8286959 | None:intergenic |
| CCATTAGTTCTTCCATGGAT+GGG | 0.443746 | 1.4:-8287330 | MS.gene016009:CDS |
| CTTATCAAAGGGCTGATTCA+AGG | 0.444079 | 1.4:-8289331 | MS.gene016009:CDS |
| TGTCGAAAGTTTGATTCAAT+GGG | 0.444829 | 1.4:-8287961 | MS.gene016009:CDS |
| TTGTTCCATTAGTTCTTCCA+TGG | 0.449933 | 1.4:-8287335 | MS.gene016009:CDS |
| CGATTTAATGTTAGCAAGGA+TGG | 0.456458 | 1.4:-8289287 | MS.gene016009:CDS |
| CTCACTGATATTTATGATGC+GGG | 0.456755 | 1.4:+8288188 | None:intergenic |
| GATTCAAAAGAAGAGTTTGA+AGG | 0.459181 | 1.4:-8288492 | MS.gene016009:CDS |
| ATGTTATTGAGAACATTAGA+AGG | 0.459905 | 1.4:+8287307 | None:intergenic |
| TATTTAGGAGAAGAGGTTGG+TGG | 0.461595 | 1.4:-8289104 | MS.gene016009:CDS |
| GGTGCACCAAAAGAAGTAGA+AGG | 0.473964 | 1.4:+8287265 | None:intergenic |
| ATATATGCCATAAGCATAAA+CGG | 0.475933 | 1.4:+8288598 | None:intergenic |
| AGTGTGTTAAGTGCGATTGC+CGG | 0.478839 | 1.4:-8288318 | MS.gene016009:CDS |
| AGTATTTAAACCCCAATTTG+AGG | 0.480130 | 1.4:+8287137 | None:intergenic |
| TGATGCGGGGAGGCATACTT+TGG | 0.480707 | 1.4:+8288202 | None:intergenic |
| GATAAATTATAAACCTCTAA+AGG | 0.488005 | 1.4:+8287244 | None:intergenic |
| GTTGGTGGATTTGATAAGCT+TGG | 0.492644 | 1.4:-8289089 | MS.gene016009:CDS |
| TGATGATTTACCCCAACAAA+AGG | 0.496863 | 1.4:+8288798 | None:intergenic |
| AAGAAGAGTTTGAAGGCACT+TGG | 0.500098 | 1.4:-8288485 | MS.gene016009:CDS |
| CAAGAACATGGCTTCAAGAT+GGG | 0.500638 | 1.4:-8289485 | MS.gene016009:CDS |
| ACAAGCTTCAAAATCACAAA+TGG | 0.503549 | 1.4:-8288443 | MS.gene016009:CDS |
| CCAAGAACATGGCTTCAAGA+TGG | 0.507821 | 1.4:-8289486 | MS.gene016009:CDS |
| AGTTATTTAGGAGAAGAGGT+TGG | 0.508257 | 1.4:-8289107 | MS.gene016009:CDS |
| GGAGCCATGGCCAAAGCAAT+CGG | 0.517653 | 1.4:-8288645 | MS.gene016009:CDS |
| GTCTCCGATTGCTTTGGCCA+TGG | 0.517925 | 1.4:+8288641 | None:intergenic |
| TTGCGAATTTACAACATCAA+AGG | 0.519182 | 1.4:-8287919 | MS.gene016009:intron |
| GGAAGTACTTCTAAAGACAT+TGG | 0.522331 | 1.4:-8288087 | MS.gene016009:CDS |
| TCATTTACTAAGATGTTACA+AGG | 0.524417 | 1.4:-8287105 | MS.gene016009:CDS |
| TTGGAGTTATTTAGGAGAAG+AGG | 0.526196 | 1.4:-8289111 | MS.gene016009:CDS |
| GAGTATCTTGCTGGAACTGG+TGG | 0.526825 | 1.4:-8288108 | MS.gene016009:CDS |
| GATTATTATTGTTCCAAACA+AGG | 0.530481 | 1.4:-8289398 | MS.gene016009:CDS |
| ATGTTAGCAAGGATGGAGAA+TGG | 0.532233 | 1.4:-8289280 | MS.gene016009:CDS |
| TAGGTGAAGTTGCTTATCAA+AGG | 0.533461 | 1.4:-8289343 | MS.gene016009:CDS |
| AAGAGTAAATTAATTAAAGG+TGG | 0.536645 | 1.4:-8289026 | MS.gene016009:CDS |
| AATGGATCACAACCATGCTT+TGG | 0.538091 | 1.4:-8289240 | MS.gene016009:CDS |
| TAATAAGAAATGACTTAGAC+TGG | 0.538323 | 1.4:+8288287 | None:intergenic |
| ATTATTATTGTTCCAAACAA+GGG | 0.540953 | 1.4:-8289397 | MS.gene016009:CDS |
| AGGTGAAGTTGCTTATCAAA+GGG | 0.546039 | 1.4:-8289342 | MS.gene016009:CDS |
| AACATTAGAAGGCCCATCCA+TGG | 0.546919 | 1.4:+8287318 | None:intergenic |
| TACAGATCAAGATGGAGCCA+TGG | 0.551336 | 1.4:-8288658 | MS.gene016009:CDS |
| TCAAATCATATGTATTAGTA+CGG | 0.557489 | 1.4:+8288829 | None:intergenic |
| GCGACAATTAGAGACTGAAA+AGG | 0.558235 | 1.4:-8288238 | MS.gene016009:CDS |
| ATATGTATTAGTACGGTAAG+TGG | 0.559004 | 1.4:+8288836 | None:intergenic |
| AAGGACAAATTGTAAAGCAA+TGG | 0.564077 | 1.4:-8289312 | MS.gene016009:CDS |
| ATAAAGTCTATGGTGAATGC+TGG | 0.565519 | 1.4:-8289152 | MS.gene016009:CDS |
| GCTCGAGCGGCACCAAAGCA+TGG | 0.565748 | 1.4:+8289228 | None:intergenic |
| GGTTATCATTCCTCAAATTG+GGG | 0.572895 | 1.4:-8287147 | MS.gene016009:CDS |
| TGGTCAAGTTGTGCATAGCA+AGG | 0.581013 | 1.4:-8289528 | MS.gene016009:CDS |
| TTCTAATGTTCTCAATAACA+TGG | 0.585453 | 1.4:-8287305 | MS.gene016009:CDS |
| ACCATCTCTCCAAAACACAT+TGG | 0.590535 | 1.4:+8288908 | None:intergenic |
| GGTGCGATTTAATGTTAGCA+AGG | 0.593147 | 1.4:-8289291 | MS.gene016009:CDS |
| ATCTTAGTAAATGAAATGGA+TGG | 0.594963 | 1.4:+8287114 | None:intergenic |
| TCTCACTGATATTTATGATG+CGG | 0.607441 | 1.4:+8288187 | None:intergenic |
| TTAAGATCACCAAAATGAGA+AGG | 0.607446 | 1.4:+8288564 | None:intergenic |
| CTGCACACTATAGTAGAACA+TGG | 0.618082 | 1.4:+8288953 | None:intergenic |
| TTGAAAAGATGGTAAACAAG+TGG | 0.620155 | 1.4:-8288260 | MS.gene016009:CDS |
| TTTAAGAACAATGAACCAGA+AGG | 0.621796 | 1.4:-8289374 | MS.gene016009:CDS |
| ATGGAGCACTGCATATAGCA+AGG | 0.629512 | 1.4:-8288391 | MS.gene016009:CDS |
| ACAACTGATCGTTGCAGCAG+AGG | 0.638921 | 1.4:+8287987 | None:intergenic |
| GAACCAGAAGGAGAAATCGT+AGG | 0.643994 | 1.4:-8289362 | MS.gene016009:CDS |
| AGAAAAGTATCAGAAACCAA+AGG | 0.645801 | 1.4:-8289182 | MS.gene016009:CDS |
| AACAAATGTCTTTGCTCGAG+CGG | 0.656974 | 1.4:+8289215 | None:intergenic |
| TATAACTTATACCAAGAACA+TGG | 0.669118 | 1.4:-8289497 | MS.gene016009:CDS |
| AAGTACTTCTAAAGACATTG+GGG | 0.673250 | 1.4:-8288085 | MS.gene016009:CDS |
| TATGCCTAATAAGAAACATG+TGG | 0.676676 | 1.4:-8288022 | MS.gene016009:CDS |
| CTGATATTTATGATGCGGGG+AGG | 0.680172 | 1.4:+8288192 | None:intergenic |
| AAAGTATCAGAAACCAAAGG+AGG | 0.690747 | 1.4:-8289179 | MS.gene016009:CDS |
| TCACTGATATTTATGATGCG+GGG | 0.700675 | 1.4:+8288189 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTCTTTTACATAATTTAATA+GGG | - | chr1.4:8289353-8289372 | MS.gene016009:CDS | 10.0% |
| !! | CTATTAAATTATGTAAAAGA+AGG | + | chr1.4:8289354-8289373 | None:intergenic | 15.0% |
| !! | GAAAAGAGTAAATTAATTAA+AGG | - | chr1.4:8287492-8287511 | MS.gene016009:intron | 15.0% |
| !!! | CTTCTTTTACATAATTTAAT+AGG | - | chr1.4:8289352-8289371 | MS.gene016009:CDS | 15.0% |
| !!! | GTTTTTTTATAATCTAGTTT+TGG | - | chr1.4:8288790-8288809 | MS.gene016009:CDS | 15.0% |
| !! | AAAAAATTTCACTCAAAATG+AGG | - | chr1.4:8288931-8288950 | MS.gene016009:CDS | 20.0% |
| !! | AAAACAATCATAATCAACTT+TGG | + | chr1.4:8287643-8287662 | None:intergenic | 20.0% |
| !! | AAGAGTAAATTAATTAAAGG+TGG | - | chr1.4:8287495-8287514 | MS.gene016009:intron | 20.0% |
| !! | ACTTAAAAGTTATCAAGAAA+TGG | + | chr1.4:8289304-8289323 | None:intergenic | 20.0% |
| !! | ATTATTATTGTTCCAAACAA+GGG | - | chr1.4:8287124-8287143 | MS.gene016009:CDS | 20.0% |
| !! | GATAAATTATAAACCTCTAA+AGG | + | chr1.4:8289280-8289299 | None:intergenic | 20.0% |
| !! | TAACATCTTAGTAAATGAAA+TGG | + | chr1.4:8289414-8289433 | None:intergenic | 20.0% |
| !! | TCAAATCATATGTATTAGTA+CGG | + | chr1.4:8287695-8287714 | None:intergenic | 20.0% |
| !! | TGTATAAAATTCGTCATAAA+TGG | - | chr1.4:8288111-8288130 | MS.gene016009:CDS | 20.0% |
| !!! | AAAGTTGATTATGATTGTTT+TGG | - | chr1.4:8287642-8287661 | MS.gene016009:intron | 20.0% |
| !!! | TGATCTGTAAAAAATGTTTT+TGG | + | chr1.4:8287852-8287871 | None:intergenic | 20.0% |
| ! | AGTTATGAATGATTTCATTG+TGG | - | chr1.4:8289321-8289340 | MS.gene016009:CDS | 25.0% |
| ! | ATATATGCCATAAGCATAAA+CGG | + | chr1.4:8287926-8287945 | None:intergenic | 25.0% |
| ! | ATCTTAGTAAATGAAATGGA+TGG | + | chr1.4:8289410-8289429 | None:intergenic | 25.0% |
| ! | ATGTTATTGAGAACATTAGA+AGG | + | chr1.4:8289217-8289236 | None:intergenic | 25.0% |
| ! | CAAGTGATTGATTAAAGATT+GGG | + | chr1.4:8287526-8287545 | None:intergenic | 25.0% |
| ! | CTTATTAGCATTTGAAAAGA+TGG | - | chr1.4:8288250-8288269 | MS.gene016009:CDS | 25.0% |
| ! | GATTATTATTGTTCCAAACA+AGG | - | chr1.4:8287123-8287142 | MS.gene016009:CDS | 25.0% |
| ! | GTATGAAAGTTACTAATGTT+TGG | - | chr1.4:8287391-8287410 | MS.gene016009:intron | 25.0% |
| ! | TAATAAGAAATGACTTAGAC+TGG | + | chr1.4:8288237-8288256 | None:intergenic | 25.0% |
| ! | TATAACTTATACCAAGAACA+TGG | - | chr1.4:8287024-8287043 | MS.gene016009:intron | 25.0% |
| ! | TCATTTACTAAGATGTTACA+AGG | - | chr1.4:8289416-8289435 | MS.gene016009:CDS | 25.0% |
| ! | TTCTAATGTTCTCAATAACA+TGG | - | chr1.4:8289216-8289235 | MS.gene016009:CDS | 25.0% |
| !! | AAACTTCTGTTTCTTTCAAT+TGG | - | chr1.4:8287787-8287806 | MS.gene016009:intron | 25.0% |
| !! | ACTAATGTTTGGAGTTATTT+AGG | - | chr1.4:8287402-8287421 | MS.gene016009:intron | 25.0% |
| !!! | AAAAGTTTCATGGTTTGTTT+TGG | - | chr1.4:8287988-8288007 | MS.gene016009:CDS | 25.0% |
| !!! | ACATTTTTTACAGATCAAGA+TGG | - | chr1.4:8287855-8287874 | MS.gene016009:intron | 25.0% |
| !!! | TTGAGTGAAATTTTTTTCAC+TGG | + | chr1.4:8288927-8288946 | None:intergenic | 25.0% |
| !!! | TTGGCTATTTAAAGTGTTTT+TGG | - | chr1.4:8287806-8287825 | MS.gene016009:intron | 25.0% |
| AACTCTGATCAAAAGTTTCA+TGG | - | chr1.4:8287978-8287997 | MS.gene016009:CDS | 30.0% | |
| AAGAAACTCAACAAATCATG+TGG | - | chr1.4:8288828-8288847 | MS.gene016009:CDS | 30.0% | |
| AAGATGGTCAAAAAAAGCAA+GGG | - | chr1.4:8288658-8288677 | MS.gene016009:CDS | 30.0% | |
| AAGGACAAATTGTAAAGCAA+TGG | - | chr1.4:8287209-8287228 | MS.gene016009:intron | 30.0% | |
| ACAAGCTTCAAAATCACAAA+TGG | - | chr1.4:8288078-8288097 | MS.gene016009:CDS | 30.0% | |
| ACTAAGATGTTACAAGGAAT+TGG | - | chr1.4:8289422-8289441 | MS.gene016009:CDS | 30.0% | |
| ACTACCACATGTTTCTTATT+AGG | + | chr1.4:8288506-8288525 | None:intergenic | 30.0% | |
| AGTATTTAAACCCCAATTTG+AGG | + | chr1.4:8289387-8289406 | None:intergenic | 30.0% | |
| ATATGTATTAGTACGGTAAG+TGG | + | chr1.4:8287688-8287707 | None:intergenic | 30.0% | |
| ATTCAGGTATGTATGTATGT+AGG | - | chr1.4:8289461-8289480 | MS.gene016009:CDS | 30.0% | |
| ATTGTTCTTAAACCCTTGTT+TGG | + | chr1.4:8287139-8287158 | None:intergenic | 30.0% | |
| CATTTGCAAAATGTCATGTT+TGG | - | chr1.4:8287744-8287763 | MS.gene016009:intron | 30.0% | |
| GATTCAAAAGAAGAGTTTGA+AGG | - | chr1.4:8288029-8288048 | MS.gene016009:CDS | 30.0% | |
| GCAAGTGATTGATTAAAGAT+TGG | + | chr1.4:8287527-8287546 | None:intergenic | 30.0% | |
| TATGCCTAATAAGAAACATG+TGG | - | chr1.4:8288499-8288518 | MS.gene016009:CDS | 30.0% | |
| TATTCAGTTATATTGCATGC+AGG | - | chr1.4:8289534-8289553 | MS.gene016009:CDS | 30.0% | |
| TCAACAAATCATGTGGAAAT+TGG | - | chr1.4:8288835-8288854 | MS.gene016009:CDS | 30.0% | |
| TCAGAAAATGCAATGAACAA+TGG | - | chr1.4:8288728-8288747 | MS.gene016009:CDS | 30.0% | |
| TCATAATAGCATTGCGATAA+AGG | + | chr1.4:8288769-8288788 | None:intergenic | 30.0% | |
| TCTCACTGATATTTATGATG+CGG | + | chr1.4:8288337-8288356 | None:intergenic | 30.0% | |
| TGACCAAGAAAAATATCTCT+GGG | + | chr1.4:8286979-8286998 | None:intergenic | 30.0% | |
| TGTCGAAAGTTTGATTCAAT+GGG | - | chr1.4:8288560-8288579 | MS.gene016009:CDS | 30.0% | |
| TTAAGATCACCAAAATGAGA+AGG | + | chr1.4:8287960-8287979 | None:intergenic | 30.0% | |
| TTGAAAAGATGGTAAACAAG+TGG | - | chr1.4:8288261-8288280 | MS.gene016009:CDS | 30.0% | |
| TTGACCAAGAAAAATATCTC+TGG | + | chr1.4:8286980-8286999 | None:intergenic | 30.0% | |
| TTGCGAATTTACAACATCAA+AGG | - | chr1.4:8288602-8288621 | MS.gene016009:CDS | 30.0% | |
| TTGTCGAAAGTTTGATTCAA+TGG | - | chr1.4:8288559-8288578 | MS.gene016009:CDS | 30.0% | |
| TTTAAGAACAATGAACCAGA+AGG | - | chr1.4:8287147-8287166 | MS.gene016009:CDS | 30.0% | |
| ! | AAGTACTTCTAAAGACATTG+GGG | - | chr1.4:8288436-8288455 | MS.gene016009:CDS | 30.0% |
| ! | AATGTTCCTTCTACTTCTTT+TGG | - | chr1.4:8289250-8289269 | MS.gene016009:CDS | 30.0% |
| ! | ATCATGTGGAAATTGGTTTA+TGG | - | chr1.4:8288842-8288861 | MS.gene016009:CDS | 30.0% |
| ! | GAAGTACTTCTAAAGACATT+GGG | - | chr1.4:8288435-8288454 | MS.gene016009:CDS | 30.0% |
| ! | TTTTATGTTCTTGCCTATCT+TGG | + | chr1.4:8289579-8289598 | None:intergenic | 30.0% |
| ! | TTTTTGAATGAGTATCTTGC+TGG | - | chr1.4:8288404-8288423 | MS.gene016009:CDS | 30.0% |
| !! | AGAAAAGTATCAGAAACCAA+AGG | - | chr1.4:8287339-8287358 | MS.gene016009:CDS | 30.0% |
| !! | GCGAATTACTAAGTTGATAA+TGG | - | chr1.4:8287263-8287282 | MS.gene016009:CDS | 30.0% |
| !! | GGGCATTTTGAAAAAAGAAA+AGG | - | chr1.4:8289025-8289044 | MS.gene016009:CDS | 30.0% |
| AATTGAGCTCATTGATGCAT+TGG | + | chr1.4:8288886-8288905 | None:intergenic | 35.0% | |
| AGGGTTATCATTCCTCAAAT+TGG | - | chr1.4:8289372-8289391 | MS.gene016009:CDS | 35.0% | |
| AGGTGAAGTTGCTTATCAAA+GGG | - | chr1.4:8287179-8287198 | MS.gene016009:intron | 35.0% | |
| AGTTATTTAGGAGAAGAGGT+TGG | - | chr1.4:8287414-8287433 | MS.gene016009:intron | 35.0% | |
| ATAAAGTCTATGGTGAATGC+TGG | - | chr1.4:8287369-8287388 | MS.gene016009:intron | 35.0% | |
| CATAAACGGTGACATGTATT+TGG | + | chr1.4:8287912-8287931 | None:intergenic | 35.0% | |
| CGATTTAATGTTAGCAAGGA+TGG | - | chr1.4:8287234-8287253 | MS.gene016009:intron | 35.0% | |
| CTCACTGATATTTATGATGC+GGG | + | chr1.4:8288336-8288355 | None:intergenic | 35.0% | |
| GAAAATGCAATGAACAATGG+TGG | - | chr1.4:8288731-8288750 | MS.gene016009:CDS | 35.0% | |
| GAAGATGGTCAAAAAAAGCA+AGG | - | chr1.4:8288657-8288676 | MS.gene016009:CDS | 35.0% | |
| GGGTTATCATTCCTCAAATT+GGG | - | chr1.4:8289373-8289392 | MS.gene016009:CDS | 35.0% | |
| GGTTATCATTCCTCAAATTG+GGG | - | chr1.4:8289374-8289393 | MS.gene016009:CDS | 35.0% | |
| TAGGTGAAGTTGCTTATCAA+AGG | - | chr1.4:8287178-8287197 | MS.gene016009:intron | 35.0% | |
| TCACTGATATTTATGATGCG+GGG | + | chr1.4:8288335-8288354 | None:intergenic | 35.0% | |
| TGATGATTTACCCCAACAAA+AGG | + | chr1.4:8287726-8287745 | None:intergenic | 35.0% | |
| TTGGAGTTATTTAGGAGAAG+AGG | - | chr1.4:8287410-8287429 | MS.gene016009:intron | 35.0% | |
| ! | AAAGTATCAGAAACCAAAGG+AGG | - | chr1.4:8287342-8287361 | MS.gene016009:CDS | 35.0% |
| ! | AAGCCCAGAGATATTTTTCT+TGG | - | chr1.4:8286973-8286992 | MS.gene016009:intron | 35.0% |
| ! | ACCAATACTTTCTGAGAAGA+TGG | - | chr1.4:8288642-8288661 | MS.gene016009:CDS | 35.0% |
| ! | ACCATCTTCTCAGAAAGTAT+TGG | + | chr1.4:8288646-8288665 | None:intergenic | 35.0% |
| ! | ATGTGGAAATTGGTTTATGG+TGG | - | chr1.4:8288845-8288864 | MS.gene016009:CDS | 35.0% |
| ! | CACGTTTAACCAATGTGTTT+TGG | - | chr1.4:8287604-8287623 | MS.gene016009:intron | 35.0% |
| ! | CATTGGTTAAACGTGATTCT+TGG | + | chr1.4:8287599-8287618 | None:intergenic | 35.0% |
| ! | TGATATGTGCTCCTTTTGTT+GGG | - | chr1.4:8287712-8287731 | MS.gene016009:intron | 35.0% |
| ! | TTGATATGTGCTCCTTTTGT+TGG | - | chr1.4:8287711-8287730 | MS.gene016009:intron | 35.0% |
| ! | TTGTTCCATTAGTTCTTCCA+TGG | - | chr1.4:8289186-8289205 | MS.gene016009:CDS | 35.0% |
| ! | TTTTAGTGTGAGAAAAGGGA+AGG | - | chr1.4:8287059-8287078 | MS.gene016009:intron | 35.0% |
| !! | ATGGGTTTTAGTGTGAGAAA+AGG | - | chr1.4:8287054-8287073 | MS.gene016009:intron | 35.0% |
| !! | CACATGTAACTCATTGATTC+AGG | - | chr1.4:8289445-8289464 | MS.gene016009:CDS | 35.0% |
| !! | GGAAGTACTTCTAAAGACAT+TGG | - | chr1.4:8288434-8288453 | MS.gene016009:CDS | 35.0% |
| !! | TGGGTTTTAGTGTGAGAAAA+GGG | - | chr1.4:8287055-8287074 | MS.gene016009:intron | 35.0% |
| !!! | AAAGTGTTTTTGGAGAGCAT+GGG | - | chr1.4:8287816-8287835 | MS.gene016009:intron | 35.0% |
| !!! | TAAAGTGTTTTTGGAGAGCA+TGG | - | chr1.4:8287815-8287834 | MS.gene016009:intron | 35.0% |
| !!! | TAATCTAGTTTTGGATAGCC+AGG | - | chr1.4:8288799-8288818 | MS.gene016009:CDS | 35.0% |
| !!! | TGATTGTTTTGGAGATGTTG+TGG | - | chr1.4:8287653-8287672 | MS.gene016009:intron | 35.0% |
| !!! | TTGTTTTGGAAATGCATGTC+AGG | - | chr1.4:8288002-8288021 | MS.gene016009:CDS | 35.0% |
| AACAAATGTCTTTGCTCGAG+CGG | + | chr1.4:8287309-8287328 | None:intergenic | 40.0% | |
| AATGAGTATCTTGCTGGAAC+TGG | - | chr1.4:8288410-8288429 | MS.gene016009:CDS | 40.0% | |
| AATGGATCACAACCATGCTT+TGG | - | chr1.4:8287281-8287300 | MS.gene016009:CDS | 40.0% | |
| ACCATCTCTCCAAAACACAT+TGG | + | chr1.4:8287616-8287635 | None:intergenic | 40.0% | |
| AGACTTTATGAGACCTCCTT+TGG | + | chr1.4:8287358-8287377 | None:intergenic | 40.0% | |
| AGCATTGCGATAAAGGATCA+TGG | + | chr1.4:8288762-8288781 | None:intergenic | 40.0% | |
| AGGAGGTCTCATAAAGTCTA+TGG | - | chr1.4:8287359-8287378 | MS.gene016009:CDS | 40.0% | |
| AGGTCTAATACTCGCATGAA+AGG | - | chr1.4:8289004-8289023 | MS.gene016009:CDS | 40.0% | |
| ATGTTAGCAAGGATGGAGAA+TGG | - | chr1.4:8287241-8287260 | MS.gene016009:intron | 40.0% | |
| CAAGAACATGGCTTCAAGAT+GGG | - | chr1.4:8287036-8287055 | MS.gene016009:intron | 40.0% | |
| CAAGTAGTGCTTTCCAAGAT+AGG | - | chr1.4:8289563-8289582 | MS.gene016009:CDS | 40.0% | |
| CATGTCACCGTTTATGCTTA+TGG | - | chr1.4:8287916-8287935 | MS.gene016009:intron | 40.0% | |
| CTGCACACTATAGTAGAACA+TGG | + | chr1.4:8287571-8287590 | None:intergenic | 40.0% | |
| GCGACAATTAGAGACTGAAA+AGG | - | chr1.4:8288283-8288302 | MS.gene016009:CDS | 40.0% | |
| GGTCTAATACTCGCATGAAA+GGG | - | chr1.4:8289005-8289024 | MS.gene016009:CDS | 40.0% | |
| GGTGCGATTTAATGTTAGCA+AGG | - | chr1.4:8287230-8287249 | MS.gene016009:intron | 40.0% | |
| GTTGAGTTTCTTTGTGTTCC+TGG | + | chr1.4:8288820-8288839 | None:intergenic | 40.0% | |
| TATTTAGGAGAAGAGGTTGG+TGG | - | chr1.4:8287417-8287436 | MS.gene016009:intron | 40.0% | |
| ! | CAGAATGCACCTTCTCATTT+TGG | - | chr1.4:8287948-8287967 | MS.gene016009:CDS | 40.0% |
| ! | CCATTAGTTCTTCCATGGAT+GGG | - | chr1.4:8289191-8289210 | MS.gene016009:CDS | 40.0% |
| ! | CTTATCAAAGGGCTGATTCA+AGG | - | chr1.4:8287190-8287209 | MS.gene016009:intron | 40.0% |
| ! | GATATGTGCTCCTTTTGTTG+GGG | - | chr1.4:8287713-8287732 | MS.gene016009:intron | 40.0% |
| ! | TCCATTAGTTCTTCCATGGA+TGG | - | chr1.4:8289190-8289209 | MS.gene016009:CDS | 40.0% |
| !! | AAGAAGAGTTTGAAGGCACT+TGG | - | chr1.4:8288036-8288055 | MS.gene016009:CDS | 40.0% |
| !! | CTATCTTGGAAAGCACTACT+TGG | + | chr1.4:8289565-8289584 | None:intergenic | 40.0% |
| !! | CTTCTCAGAAAGTATTGGTC+AGG | + | chr1.4:8288641-8288660 | None:intergenic | 40.0% |
| !! | GTTGGTGGATTTGATAAGCT+TGG | - | chr1.4:8287432-8287451 | MS.gene016009:intron | 40.0% |
| !! | TTCTTTTGGTGCACCTTTAG+AGG | - | chr1.4:8289264-8289283 | MS.gene016009:CDS | 40.0% |
| !!! | ACCAATGTGTTTTGGAGAGA+TGG | - | chr1.4:8287612-8287631 | MS.gene016009:intron | 40.0% |
| !!! | ACCTTCCTTTAGTTTTTGCG+CGG | + | chr1.4:8288988-8289007 | None:intergenic | 40.0% |
| AACATTAGAAGGCCCATCCA+TGG | + | chr1.4:8289206-8289225 | None:intergenic | 45.0% | |
| AGTGTGTTAAGTGCGATTGC+CGG | - | chr1.4:8288203-8288222 | MS.gene016009:CDS | 45.0% | |
| CATAACGTCTCCGATTGCTT+TGG | + | chr1.4:8287889-8287908 | None:intergenic | 45.0% | |
| CCAAGAACATGGCTTCAAGA+TGG | - | chr1.4:8287035-8287054 | MS.gene016009:intron | 45.0% | |
| CCATCTTGAAGCCATGTTCT+TGG | + | chr1.4:8287038-8287057 | None:intergenic | 45.0% | |
| CCCATCCATGGAAGAACTAA+TGG | + | chr1.4:8289194-8289213 | None:intergenic | 45.0% | |
| CTGATATTTATGATGCGGGG+AGG | + | chr1.4:8288332-8288351 | None:intergenic | 45.0% | |
| GAACCAGAAGGAGAAATCGT+AGG | - | chr1.4:8287159-8287178 | MS.gene016009:intron | 45.0% | |
| GGTGCACCAAAAGAAGTAGA+AGG | + | chr1.4:8289259-8289278 | None:intergenic | 45.0% | |
| TACAGATCAAGATGGAGCCA+TGG | - | chr1.4:8287863-8287882 | MS.gene016009:intron | 45.0% | |
| TCACCTACGATTTCTCCTTC+TGG | + | chr1.4:8287165-8287184 | None:intergenic | 45.0% | |
| ! | TGGTCAAGTTGTGCATAGCA+AGG | - | chr1.4:8286993-8287012 | MS.gene016009:intron | 45.0% |
| !! | ATGGAGCACTGCATATAGCA+AGG | - | chr1.4:8288130-8288149 | MS.gene016009:CDS | 45.0% |
| ACAACTGATCGTTGCAGCAG+AGG | + | chr1.4:8288537-8288556 | None:intergenic | 50.0% | |
| GAGTATCTTGCTGGAACTGG+TGG | - | chr1.4:8288413-8288432 | MS.gene016009:CDS | 50.0% | |
| GCCGCGCAAAAACTAAAGGA+AGG | - | chr1.4:8288984-8289003 | MS.gene016009:CDS | 50.0% | |
| ! | ACTTAGACTGGTTGCTGCTC+CGG | + | chr1.4:8288225-8288244 | None:intergenic | 50.0% |
| CCTCGCCGCGCAAAAACTAA+AGG | - | chr1.4:8288980-8288999 | MS.gene016009:CDS | 55.0% | |
| GGAGCCATGGCCAAAGCAAT+CGG | - | chr1.4:8287876-8287895 | MS.gene016009:intron | 55.0% | |
| GTCTCCGATTGCTTTGGCCA+TGG | + | chr1.4:8287883-8287902 | None:intergenic | 55.0% | |
| ! | TGATGCGGGGAGGCATACTT+TGG | + | chr1.4:8288322-8288341 | None:intergenic | 55.0% |
| !!! | CCTTTAGTTTTTGCGCGGCG+AGG | + | chr1.4:8288983-8289002 | None:intergenic | 55.0% |
| GCTCGAGCGGCACCAAAGCA+TGG | + | chr1.4:8287296-8287315 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 8286937 | 8289606 | 8286937 | ID=MS.gene016009 |
| chr1.4 | mRNA | 8286937 | 8289606 | 8286937 | ID=MS.gene016009.t1;Parent=MS.gene016009 |
| chr1.4 | exon | 8287920 | 8289606 | 8287920 | ID=MS.gene016009.t1.exon1;Parent=MS.gene016009.t1 |
| chr1.4 | CDS | 8287920 | 8289606 | 8287920 | ID=cds.MS.gene016009.t1;Parent=MS.gene016009.t1 |
| chr1.4 | exon | 8287258 | 8287379 | 8287258 | ID=MS.gene016009.t1.exon2;Parent=MS.gene016009.t1 |
| chr1.4 | CDS | 8287258 | 8287379 | 8287258 | ID=cds.MS.gene016009.t1;Parent=MS.gene016009.t1 |
| chr1.4 | exon | 8287077 | 8287169 | 8287077 | ID=MS.gene016009.t1.exon3;Parent=MS.gene016009.t1 |
| chr1.4 | CDS | 8287077 | 8287169 | 8287077 | ID=cds.MS.gene016009.t1;Parent=MS.gene016009.t1 |
| chr1.4 | exon | 8286937 | 8286987 | 8286937 | ID=MS.gene016009.t1.exon4;Parent=MS.gene016009.t1 |
| chr1.4 | CDS | 8286937 | 8286987 | 8286937 | ID=cds.MS.gene016009.t1;Parent=MS.gene016009.t1 |
| Gene Sequence |
| Protein sequence |
