AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene016151

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene016151.t1 MTR_1g015140 97.531 162 4 0 1 162 1 162 4.90e-119 333
MS.gene016151.t1 MTR_3g104750 59.172 169 55 6 1 161 1 163 3.03e-55 171
MS.gene016151.t1 MTR_8g092010 50.000 140 60 3 25 158 29 164 4.95e-36 123
MS.gene016151.t1 MTR_3g095040 45.882 170 78 4 5 162 11 178 5.88e-36 124
MS.gene016151.t1 MTR_1g086790 57.609 92 39 0 69 160 125 216 2.13e-31 115
MS.gene016151.t1 MTR_2g033820 68.421 76 24 0 85 160 186 261 2.58e-31 115
MS.gene016151.t1 MTR_7g109800 62.025 79 30 0 81 159 124 202 4.35e-29 108
MS.gene016151.t1 MTR_8g096730 46.078 102 55 0 58 159 26 127 4.53e-29 104
MS.gene016151.t1 MTR_7g028415 63.768 69 25 0 91 159 82 150 7.24e-29 104
MS.gene016151.t1 MTR_7g028710 63.768 69 25 0 91 159 82 150 7.24e-29 104
MS.gene016151.t1 MTR_4g094588 66.197 71 24 0 89 159 165 235 3.04e-28 107
MS.gene016151.t1 MTR_7g079010 63.380 71 26 0 89 159 128 198 5.00e-28 103
MS.gene016151.t1 MTR_4g122530 66.667 72 24 0 89 160 195 266 9.20e-28 107
MS.gene016151.t1 MTR_5g094430 61.842 76 28 1 84 158 211 286 1.01e-27 107
MS.gene016151.t1 MTR_5g094430 50.000 58 28 1 102 159 66 122 9.06e-12 62.4
MS.gene016151.t1 MTR_5g094430 61.842 76 28 1 84 158 233 308 1.15e-27 107
MS.gene016151.t1 MTR_5g094430 50.000 58 28 1 102 159 88 144 8.00e-12 62.4
MS.gene016151.t1 MTR_5g094430 61.842 76 28 1 84 158 345 420 1.50e-27 107
MS.gene016151.t1 MTR_5g094430 50.000 58 28 1 102 159 200 256 8.27e-12 62.4
MS.gene016151.t1 MTR_3g031220 65.714 70 24 0 89 158 352 421 2.47e-27 106
MS.gene016151.t1 MTR_3g031220 42.000 100 45 4 65 159 163 254 3.14e-16 75.1
MS.gene016151.t1 MTR_3g056100 60.526 76 29 1 84 158 383 458 3.53e-27 106
MS.gene016151.t1 MTR_3g056100 50.000 58 28 1 102 159 243 299 1.61e-12 64.7
MS.gene016151.t1 MTR_3g056100 60.526 76 29 1 84 158 396 471 3.73e-27 106
MS.gene016151.t1 MTR_3g056100 50.000 58 28 1 102 159 243 299 1.63e-12 64.7
MS.gene016151.t1 MTR_3g056100 60.526 76 29 1 84 158 239 314 3.75e-27 105
MS.gene016151.t1 MTR_3g056100 50.000 58 28 1 102 159 99 155 2.07e-12 64.3
MS.gene016151.t1 MTR_5g091390 67.143 70 23 0 89 158 144 213 3.96e-27 103
MS.gene016151.t1 MTR_3g056100 60.526 76 29 1 84 158 252 327 4.30e-27 105
MS.gene016151.t1 MTR_3g056100 50.000 58 28 1 102 159 99 155 1.99e-12 64.3
MS.gene016151.t1 MTR_5g043880 62.338 77 28 1 83 158 104 180 5.00e-27 102
MS.gene016151.t1 MTR_4g013260 60.526 76 29 1 84 158 317 392 6.01e-27 105
MS.gene016151.t1 MTR_4g013260 51.724 58 28 0 102 159 184 241 2.38e-15 72.8
MS.gene016151.t1 MTR_5g097490 54.444 90 39 1 69 158 221 308 6.44e-27 104
MS.gene016151.t1 MTR_3g095080 60.274 73 29 0 89 161 131 203 2.68e-26 99.4
MS.gene016151.t1 MTR_3g095080 60.274 73 29 0 89 161 155 227 2.72e-26 100
MS.gene016151.t1 MTR_8g007270 57.143 77 32 1 83 158 134 210 3.71e-26 99.4
MS.gene016151.t1 MTR_3g009470 59.211 76 30 1 84 158 476 551 5.78e-26 103
MS.gene016151.t1 MTR_3g009470 51.724 58 27 1 102 159 280 336 2.67e-14 69.7
MS.gene016151.t1 MTR_5g074400 62.857 70 26 0 89 158 407 476 7.23e-26 102
MS.gene016151.t1 MTR_5g074400 53.448 58 26 1 102 159 243 299 5.36e-15 71.6
MS.gene016151.t1 MTR_8g092140 60.811 74 28 1 89 161 146 219 1.72e-25 97.8
MS.gene016151.t1 MTR_7g080020 56.579 76 32 1 84 158 474 549 1.84e-25 101
MS.gene016151.t1 MTR_7g080020 43.421 76 36 2 83 158 267 335 1.52e-12 64.7
MS.gene016151.t1 MTR_7g080000 58.571 70 29 0 89 158 419 488 3.36e-25 100
MS.gene016151.t1 MTR_7g080000 44.737 76 35 2 83 158 221 289 1.28e-12 65.1
MS.gene016151.t1 MTR_7g071120 57.895 76 31 1 84 158 305 380 1.23e-24 99.0
MS.gene016151.t1 MTR_7g071120 53.448 58 26 1 102 159 166 222 1.26e-14 70.5
MS.gene016151.t1 MTR_7g011820 55.714 70 31 0 89 158 397 466 1.83e-24 98.6
MS.gene016151.t1 MTR_7g011820 54.386 57 25 1 102 158 228 283 9.75e-14 68.2
MS.gene016151.t1 MTR_5g042920 55.714 70 31 0 89 158 307 376 6.36e-24 96.7
MS.gene016151.t1 MTR_5g042920 54.386 57 25 1 102 158 151 206 2.27e-13 67.0
MS.gene016151.t1 MTR_4g132430 52.703 74 34 1 87 159 112 185 1.18e-23 95.1
MS.gene016151.t1 MTR_4g132430 52.703 74 34 1 87 159 246 319 3.86e-23 94.7
MS.gene016151.t1 MTR_4g082580 52.778 72 34 0 87 158 263 334 7.34e-23 93.2
MS.gene016151.t1 MTR_4g082580 50.877 57 28 0 102 158 145 201 1.35e-13 67.4
MS.gene016151.t1 MTR_4g130900 52.632 76 36 0 83 158 340 415 2.94e-22 92.4
MS.gene016151.t1 MTR_2g023930 42.424 99 55 2 63 159 265 363 3.26e-22 92.4
MS.gene016151.t1 MTR_7g110720 51.351 74 35 1 87 159 174 247 3.52e-22 91.7
MS.gene016151.t1 MTR_7g110720 51.351 74 35 1 87 159 201 274 3.87e-22 91.7
MS.gene016151.t1 MTR_7g062220 64.912 57 20 0 102 158 124 180 7.06e-22 89.7
MS.gene016151.t1 MTR_4g094412 51.351 74 35 1 87 159 219 292 3.11e-21 89.4
MS.gene016151.t1 MTR_4g094412 51.351 74 35 1 87 159 228 301 3.38e-21 89.4
MS.gene016151.t1 MTR_2g088000 50.685 73 35 1 87 158 334 406 4.01e-21 89.4
MS.gene016151.t1 MTR_4g049760 42.000 100 57 1 61 159 249 348 5.63e-21 89.0
MS.gene016151.t1 MTR_1g078260 52.778 72 33 1 88 158 233 304 1.77e-20 87.4
MS.gene016151.t1 MTR_3g053330 49.315 73 36 1 87 158 236 308 2.75e-20 86.7
MS.gene016151.t1 MTR_7g009730 51.389 72 34 1 89 159 206 277 3.82e-20 86.7
MS.gene016151.t1 MTR_1g077780 50.000 70 35 0 89 158 49 118 2.29e-19 79.7
MS.gene016151.t1 MTR_2g105060 51.351 74 33 2 89 159 79 152 2.79e-19 81.6
MS.gene016151.t1 MTR_2g105060 51.351 74 33 2 89 159 154 227 4.29e-19 82.4
MS.gene016151.t1 MTR_5g016610 50.704 71 34 1 89 158 186 256 5.32e-19 81.3
MS.gene016151.t1 MTR_4g107970 49.315 73 36 1 87 158 163 235 5.34e-19 83.2
MS.gene016151.t1 MTR_4g094908 50.704 71 34 1 89 158 253 323 5.46e-19 82.4
MS.gene016151.t1 MTR_4g107970 49.315 73 36 1 87 158 240 312 6.24e-19 83.2
MS.gene016151.t1 MTR_7g100510 46.575 73 39 0 86 158 345 417 1.28e-18 82.0
MS.gene016151.t1 MTR_7g100510 53.571 56 25 1 103 158 190 244 4.03e-13 66.2
MS.gene016151.t1 MTR_4g049790 50.000 74 36 1 87 159 297 370 1.51e-18 82.0
MS.gene016151.t1 MTR_3g106060 52.542 59 27 1 101 158 137 195 1.53e-18 80.5
MS.gene016151.t1 MTR_4g007060 52.459 61 28 1 100 159 126 186 1.63e-18 80.5
MS.gene016151.t1 MTR_4g007060 52.459 61 28 1 100 159 160 220 2.47e-18 80.1
MS.gene016151.t1 MTR_1g009613 50.704 71 34 1 89 158 249 319 2.65e-18 80.5
MS.gene016151.t1 MTR_2g045360 49.315 73 36 1 87 158 196 268 3.80e-18 80.5
MS.gene016151.t1 MTR_6g086555 45.946 74 39 1 86 158 190 263 1.97e-17 78.6
MS.gene016151.t1 MTR_1g013760 50.877 57 27 1 103 158 141 197 8.61e-17 75.5
MS.gene016151.t1 MTR_4g127040 46.479 71 37 1 89 158 232 302 1.08e-16 75.9
MS.gene016151.t1 MTR_1g013790 48.333 60 30 1 100 158 99 158 1.22e-16 74.7
MS.gene016151.t1 MTR_3g031220 42.000 100 45 4 65 159 163 254 1.97e-16 75.5
MS.gene016151.t1 MTR_0117s0040 38.462 91 54 2 71 160 44 133 2.22e-16 73.9
MS.gene016151.t1 MTR_1g070455 46.753 77 38 2 83 158 276 350 2.23e-16 75.1
MS.gene016151.t1 MTR_7g109600 55.172 58 25 1 103 159 54 111 2.51e-16 74.3
MS.gene016151.t1 MTR_5g097500 47.143 70 37 0 89 158 217 286 2.81e-16 74.7
MS.gene016151.t1 MTR_3g108960 45.070 71 38 1 89 158 301 371 6.90e-16 73.9
MS.gene016151.t1 MTR_8g028565 54.237 59 26 1 103 160 156 214 1.14e-15 73.2
MS.gene016151.t1 MTR_8g087000 52.632 57 26 1 103 158 78 134 1.52e-14 68.9
MS.gene016151.t1 MTR_8g087000 52.632 57 26 1 103 158 77 133 1.63e-14 68.9
MS.gene016151.t1 MTR_3g009470 51.724 58 27 1 102 159 280 336 2.09e-14 70.1
MS.gene016151.t1 MTR_8g092010 39.091 110 57 3 25 128 29 134 2.84e-14 66.2
MS.gene016151.t1 MTR_8g098945 50.000 60 29 1 101 159 128 187 5.28e-14 67.8
MS.gene016151.t1 MTR_1g099600 52.632 57 26 1 103 158 186 242 6.84e-14 67.8
MS.gene016151.t1 MTR_2g032030 34.862 109 66 3 56 159 217 325 9.63e-14 68.2
MS.gene016151.t1 MTR_2g032030 34.862 109 66 3 56 159 217 325 9.65e-14 68.2
MS.gene016151.t1 MTR_7g079040 50.847 59 28 1 103 160 155 213 9.77e-14 67.8
MS.gene016151.t1 MTR_2g024380 47.541 61 31 1 99 158 248 308 1.74e-13 67.4
MS.gene016151.t1 MTR_2g016770 40.741 81 43 2 83 158 12 92 1.98e-13 65.5
MS.gene016151.t1 MTR_2g016770 40.741 81 43 2 83 158 4 84 2.15e-13 65.5
MS.gene016151.t1 MTR_2g083870 50.877 57 27 1 103 158 81 137 2.43e-13 65.9
MS.gene016151.t1 MTR_2g024350 45.902 61 32 1 99 158 5 65 3.36e-13 65.1
MS.gene016151.t1 MTR_3g090860 40.506 79 41 2 82 157 116 191 6.86e-13 65.5
MS.gene016151.t1 MTR_4g047580 42.647 68 38 1 87 153 266 333 2.95e-12 63.9
MS.gene016151.t1 MTR_5g074200 49.123 57 28 1 102 158 220 275 1.82e-11 61.2
MS.gene016151.t1 MTR_8g067635 45.902 61 32 1 99 158 346 406 5.40e-11 60.1
MS.gene016151.t1 MTR_8g067650 46.667 60 31 1 100 158 337 396 5.47e-11 60.1
MS.gene016151.t1 MTR_8g032510 38.889 90 43 2 80 157 88 177 6.30e-11 59.3
MS.gene016151.t1 MTR_7g073430 45.763 59 29 1 102 157 122 180 7.08e-11 59.3
MS.gene016151.t1 MTR_2g075680 42.857 70 37 1 95 161 141 210 9.97e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene016151.t1 AT5G26170 77.778 72 16 0 89 160 100 171 1.94e-39 132
MS.gene016151.t1 AT5G64810 43.871 155 75 4 18 160 14 168 5.32e-36 124
MS.gene016151.t1 AT5G49520 71.831 71 20 0 89 159 208 278 1.97e-30 114
MS.gene016151.t1 AT2G47260 62.963 81 30 0 80 160 152 232 7.86e-30 111
MS.gene016151.t1 AT1G29860 70.423 71 21 0 89 159 123 193 2.00e-29 109
MS.gene016151.t1 AT4G18170 63.636 77 28 0 83 159 153 229 3.06e-29 109
MS.gene016151.t1 AT5G13080 61.111 72 28 0 88 159 53 124 5.37e-29 104
MS.gene016151.t1 AT3G01970 62.857 70 26 0 89 158 52 121 8.84e-29 103
MS.gene016151.t1 AT4G26640 60.526 76 29 1 84 158 186 261 6.56e-28 107
MS.gene016151.t1 AT4G26640 50.000 60 29 1 100 159 33 91 1.54e-12 64.7
MS.gene016151.t1 AT4G26640 60.526 76 29 1 84 158 186 261 6.56e-28 107
MS.gene016151.t1 AT4G26640 50.000 60 29 1 100 159 33 91 1.54e-12 64.7
MS.gene016151.t1 AT4G26640 60.526 76 29 1 84 158 186 261 6.56e-28 107
MS.gene016151.t1 AT4G26640 50.000 60 29 1 100 159 33 91 1.54e-12 64.7
MS.gene016151.t1 AT4G26640 60.526 76 29 1 84 158 186 261 6.56e-28 107
MS.gene016151.t1 AT4G26640 50.000 60 29 1 100 159 33 91 1.54e-12 64.7
MS.gene016151.t1 AT1G69310 63.636 77 27 1 83 158 127 203 7.90e-28 105
MS.gene016151.t1 AT1G69310 63.636 77 27 1 83 158 127 203 7.90e-28 105
MS.gene016151.t1 AT1G69310 63.636 77 27 1 83 158 127 203 7.90e-28 105
MS.gene016151.t1 AT4G26640 60.526 76 29 1 84 158 322 397 9.42e-28 107
MS.gene016151.t1 AT4G26640 50.000 60 29 1 100 159 169 227 1.24e-12 65.1
MS.gene016151.t1 AT4G26640 60.526 76 29 1 84 158 290 365 1.04e-27 107
MS.gene016151.t1 AT4G26640 50.000 60 29 1 100 159 137 195 1.32e-12 64.7
MS.gene016151.t1 AT4G26640 60.526 76 29 1 84 158 362 437 1.07e-27 107
MS.gene016151.t1 AT4G26640 50.000 60 29 1 100 159 209 267 1.16e-12 65.1
MS.gene016151.t1 AT2G38470 60.526 76 29 1 84 158 343 418 2.00e-27 107
MS.gene016151.t1 AT2G38470 51.724 58 27 1 102 159 184 240 2.13e-14 70.1
MS.gene016151.t1 AT5G07100 61.250 80 28 2 82 158 118 197 3.25e-27 102
MS.gene016151.t1 AT5G07100 48.276 58 30 0 102 159 24 81 2.86e-13 65.1
MS.gene016151.t1 AT5G07100 61.250 80 28 2 82 158 118 197 3.25e-27 102
MS.gene016151.t1 AT5G07100 48.276 58 30 0 102 159 24 81 2.86e-13 65.1
MS.gene016151.t1 AT5G07100 61.250 80 28 2 82 158 118 197 3.25e-27 102
MS.gene016151.t1 AT5G07100 48.276 58 30 0 102 159 24 81 2.86e-13 65.1
MS.gene016151.t1 AT5G07100 61.250 80 28 2 82 158 118 197 3.25e-27 102
MS.gene016151.t1 AT5G07100 48.276 58 30 0 102 159 24 81 2.86e-13 65.1
MS.gene016151.t1 AT3G62340 63.636 77 27 1 83 159 100 175 5.72e-27 102
MS.gene016151.t1 AT5G46350 63.380 71 26 0 89 159 170 240 6.60e-27 103
MS.gene016151.t1 AT5G07100 61.250 80 28 2 82 158 211 290 7.26e-27 103
MS.gene016151.t1 AT5G07100 48.276 58 30 0 102 159 117 174 3.88e-13 65.9
MS.gene016151.t1 AT4G39410 57.500 80 33 1 83 161 203 282 9.64e-27 102
MS.gene016151.t1 AT2G44745 58.442 77 31 1 83 158 125 201 9.82e-27 100
MS.gene016151.t1 AT2G04880 61.429 70 27 0 89 158 270 339 1.27e-26 104
MS.gene016151.t1 AT2G04880 45.902 61 32 1 99 159 108 167 1.29e-11 62.0
MS.gene016151.t1 AT2G46130 59.740 77 31 0 83 159 11 87 1.61e-26 97.1
MS.gene016151.t1 AT2G04880 61.429 70 27 0 89 158 294 363 1.90e-26 103
MS.gene016151.t1 AT2G04880 45.902 61 32 1 99 159 108 167 1.36e-11 62.0
MS.gene016151.t1 AT1G64000 58.333 72 30 0 88 159 100 171 2.01e-26 99.4
MS.gene016151.t1 AT5G56270 56.627 83 34 1 76 158 463 543 3.14e-26 103
MS.gene016151.t1 AT5G56270 49.123 57 28 1 102 158 273 328 5.71e-12 63.2
MS.gene016151.t1 AT5G41570 54.217 83 31 1 84 159 73 155 1.05e-25 97.1
MS.gene016151.t1 AT4G26440 41.221 131 70 1 28 158 305 428 3.08e-25 100
MS.gene016151.t1 AT4G26440 34.783 115 62 4 45 158 131 233 1.86e-12 64.3
MS.gene016151.t1 AT2G21900 53.333 90 30 2 83 160 78 167 5.30e-25 95.9
MS.gene016151.t1 AT1G13960 55.714 70 31 0 89 158 243 312 2.80e-24 97.1
MS.gene016151.t1 AT1G13960 56.140 57 24 1 102 158 76 131 8.53e-15 70.9
MS.gene016151.t1 AT1G13960 55.714 70 31 0 89 158 396 465 3.42e-24 97.8
MS.gene016151.t1 AT1G13960 56.140 57 24 1 102 158 229 284 4.59e-15 72.0
MS.gene016151.t1 AT3G01080 55.714 70 31 0 89 158 331 400 5.37e-24 97.1
MS.gene016151.t1 AT3G01080 50.877 57 27 1 102 158 205 260 7.16e-13 65.5
MS.gene016151.t1 AT3G01080 55.714 70 31 0 89 158 293 362 6.68e-24 96.7
MS.gene016151.t1 AT3G01080 50.877 57 27 1 102 158 167 222 9.07e-13 65.1
MS.gene016151.t1 AT2G30250 56.579 76 32 1 84 158 309 384 1.96e-23 95.1
MS.gene016151.t1 AT2G30250 44.828 58 31 1 102 159 166 222 7.01e-11 59.7
MS.gene016151.t1 AT2G03340 54.286 70 32 0 89 158 402 471 6.24e-23 94.4
MS.gene016151.t1 AT2G03340 38.235 102 58 2 61 158 205 305 1.36e-14 70.5
MS.gene016151.t1 AT1G69310 59.740 77 26 2 83 158 127 199 8.76e-23 91.7
MS.gene016151.t1 AT4G04450 52.703 74 34 1 87 159 183 256 2.45e-22 92.4
MS.gene016151.t1 AT4G04450 52.703 74 34 1 87 159 277 350 6.08e-22 91.7
MS.gene016151.t1 AT4G22070 52.703 74 34 1 87 159 282 355 7.65e-22 91.3
MS.gene016151.t1 AT4G22070 52.703 74 34 1 87 159 282 355 7.65e-22 91.3
MS.gene016151.t1 AT4G22070 52.703 74 34 1 87 159 282 355 7.65e-22 91.3
MS.gene016151.t1 AT4G22070 52.703 74 34 1 87 159 282 355 7.65e-22 91.3
MS.gene016151.t1 AT1G62300 52.703 74 34 1 87 159 297 370 8.59e-22 91.3
MS.gene016151.t1 AT2G46130 55.844 77 30 1 83 159 11 83 1.85e-21 84.0
MS.gene016151.t1 AT4G30935 57.377 61 26 0 98 158 327 387 6.64e-21 88.6
MS.gene016151.t1 AT1G68150 51.351 74 35 1 87 159 220 293 1.17e-20 87.4
MS.gene016151.t1 AT5G15130 41.000 100 57 2 61 158 143 242 1.94e-20 87.4
MS.gene016151.t1 AT5G15130 41.000 100 57 2 61 158 185 284 2.06e-20 87.4
MS.gene016151.t1 AT4G01720 50.000 74 36 1 87 159 224 297 2.61e-20 87.0
MS.gene016151.t1 AT2G23320 48.148 81 37 2 83 158 217 297 5.10e-20 84.7
MS.gene016151.t1 AT1G55600 46.512 86 44 1 75 160 282 365 7.51e-20 85.5
MS.gene016151.t1 AT2G24570 43.000 100 54 2 62 158 201 300 1.34e-19 84.0
MS.gene016151.t1 AT1G18860 47.297 74 38 1 87 159 224 297 1.34e-19 85.1
MS.gene016151.t1 AT1G80840 38.889 108 61 3 55 159 99 204 9.39e-19 81.3
MS.gene016151.t1 AT4G24240 42.718 103 50 3 64 158 237 338 1.50e-18 81.3
MS.gene016151.t1 AT5G43290 57.627 59 25 0 100 158 112 170 1.52e-18 80.5
MS.gene016151.t1 AT4G31550 49.296 71 35 1 89 158 232 302 3.42e-18 80.1
MS.gene016151.t1 AT4G31550 49.296 71 35 1 89 158 233 303 3.52e-18 80.1
MS.gene016151.t1 AT4G31800 50.847 59 28 1 101 158 110 168 3.81e-18 78.6
MS.gene016151.t1 AT4G31800 50.847 59 28 1 101 158 175 233 6.48e-18 79.0
MS.gene016151.t1 AT2G25000 50.847 59 28 1 101 158 102 160 7.66e-18 77.8
MS.gene016151.t1 AT2G25000 50.847 59 28 1 101 158 102 160 7.66e-18 77.8
MS.gene016151.t1 AT3G04670 49.351 77 36 2 83 158 245 319 1.29e-17 78.6
MS.gene016151.t1 AT2G25000 50.847 59 28 1 101 158 124 182 1.57e-17 77.0
MS.gene016151.t1 AT5G28650 49.351 77 36 2 83 158 245 319 1.85e-17 78.2
MS.gene016151.t1 AT2G25000 50.847 59 28 1 101 158 145 203 2.00e-17 77.4
MS.gene016151.t1 AT2G30590 48.611 72 36 1 89 159 300 371 5.88e-17 77.0
MS.gene016151.t1 AT1G69810 41.053 95 54 2 67 159 110 204 2.09e-16 75.1
MS.gene016151.t1 AT1G69810 41.053 95 54 2 67 159 168 262 3.36e-16 75.1
MS.gene016151.t1 AT2G37260 53.448 58 27 0 101 158 266 323 3.72e-16 74.7
MS.gene016151.t1 AT2G37260 53.571 56 25 1 103 158 84 138 2.38e-12 63.9
MS.gene016151.t1 AT2G37260 53.448 58 27 0 101 158 268 325 3.72e-16 74.7
MS.gene016151.t1 AT2G37260 53.571 56 25 1 103 158 86 140 2.34e-12 63.9
MS.gene016151.t1 AT2G37260 53.448 58 27 0 101 158 348 405 4.16e-16 74.7
MS.gene016151.t1 AT2G37260 53.571 56 25 1 103 158 166 220 2.03e-12 64.3
MS.gene016151.t1 AT5G52830 58.621 58 23 1 103 159 166 223 4.70e-16 74.3
MS.gene016151.t1 AT1G29280 51.724 58 27 1 103 159 75 132 5.33e-16 73.2
MS.gene016151.t1 AT3G58710 53.448 58 26 1 103 159 71 128 2.12e-14 68.9
MS.gene016151.t1 AT4G01250 50.847 59 28 1 103 160 129 187 2.26e-14 69.3
MS.gene016151.t1 AT3G58710 53.448 58 26 1 103 159 72 129 2.27e-14 68.9
MS.gene016151.t1 AT2G34830 43.421 76 41 2 86 159 198 273 4.53e-14 68.9
MS.gene016151.t1 AT2G34830 43.421 76 41 2 86 159 207 282 5.19e-14 68.9
MS.gene016151.t1 AT1G30650 43.421 76 41 2 86 159 200 275 8.77e-14 68.2
MS.gene016151.t1 AT3G01080 50.877 57 27 1 102 158 205 260 3.67e-13 66.2
MS.gene016151.t1 AT5G45050 44.595 74 34 2 93 159 1137 1210 4.31e-13 66.2
MS.gene016151.t1 AT5G45050 44.595 74 34 2 93 159 1165 1238 4.49e-13 66.2
MS.gene016151.t1 AT5G45050 44.595 74 34 2 93 159 1026 1099 4.49e-13 66.2
MS.gene016151.t1 AT4G23550 36.957 92 52 2 68 158 111 197 1.96e-12 63.9
MS.gene016151.t1 AT2G40740 47.458 59 28 1 102 157 173 231 8.41e-11 59.3
MS.gene016151.t1 AT2G40740 47.458 59 28 1 102 157 182 240 9.28e-11 59.3
MS.gene016151.t1 AT2G40750 39.726 73 36 2 93 157 138 210 9.49e-11 59.3

Find 35 sgRNAs with CRISPR-Local

Find 44 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATATATATACCTTGGATT+AGG 0.247704 1.2:-7097434 None:intergenic
GATGATGAATTTGCTGTTCT+TGG 0.294438 1.2:-7096959 None:intergenic
TGGTTGCTAAAATCACTTTC+AGG 0.298136 1.2:-7096983 None:intergenic
AATATATATACCTTGGATTA+GGG 0.308746 1.2:-7097433 None:intergenic
ATATGAGTGGAAACGATAAT+TGG 0.349180 1.2:+7097303 MS.gene016151:CDS
GGGTACAGATGGAGGAAGTA+TGG 0.355517 1.2:+7097389 MS.gene016151:CDS
TAATTGGAAGAAGGAAATTA+AGG 0.361306 1.2:+7097319 MS.gene016151:CDS
GTGATTGCAGGAATTATTAT+AGG 0.370210 1.2:+7097528 MS.gene016151:intron
GAGGAAGTATGGAAAGAAAA+TGG 0.372428 1.2:+7097400 MS.gene016151:CDS
GTGGGTGTGCATGCCCTCAT+AGG 0.406915 1.2:-7097624 None:intergenic
TGTTTGAGCTAGCAAGAACT+TGG 0.437457 1.2:-7097647 None:intergenic
TATTATAGGTGTTCAGTTGA+GGG 0.484385 1.2:+7097542 MS.gene016151:CDS
TGAGTTTCGATGACAATGAA+TGG 0.486049 1.2:+7097035 MS.gene016151:CDS
TTTCAAGCCAACGAAGTAGC+AGG 0.492097 1.2:+7097091 MS.gene016151:CDS
AAGTAGTCAGAGAGTTCAAA+TGG 0.505113 1.2:-7097013 None:intergenic
GCTGCCACCTGCTACTTCGT+TGG 0.513271 1.2:-7097098 None:intergenic
GCAGGTGGCAGCTACATTGA+AGG 0.517291 1.2:+7097109 MS.gene016151:CDS
AAAACTAAAGACTCAGTGGT+TGG 0.518786 1.2:-7097070 None:intergenic
AGAGTTCAAATGGCCACTGC+TGG 0.523946 1.2:-7097003 None:intergenic
TTATTATAGGTGTTCAGTTG+AGG 0.524859 1.2:+7097541 MS.gene016151:CDS
TTATGTGATAACAACCTATG+AGG 0.527879 1.2:+7097610 MS.gene016151:CDS
CTGATTGAAATACTTGATGA+TGG 0.529008 1.2:+7097368 MS.gene016151:CDS
TGGAAACGATAATTGGAAGA+AGG 0.531499 1.2:+7097310 MS.gene016151:CDS
TACTTGATGATGGGTACAGA+TGG 0.541635 1.2:+7097378 MS.gene016151:CDS
ACTAATAATATGAATATGAG+TGG 0.553406 1.2:+7097290 MS.gene016151:CDS
GAGCTAGCAAGAACTTGGGT+GGG 0.555150 1.2:-7097642 None:intergenic
ATTATAGGTGTTCAGTTGAG+GGG 0.580189 1.2:+7097543 MS.gene016151:CDS
CAGGTGGCAGCTACATTGAA+GGG 0.604012 1.2:+7097110 MS.gene016151:CDS
TATGTGATAACAACCTATGA+GGG 0.610093 1.2:+7097611 MS.gene016151:CDS
TGAGCTAGCAAGAACTTGGG+TGG 0.613536 1.2:-7097643 None:intergenic
TGATTGAAATACTTGATGAT+GGG 0.620660 1.2:+7097369 MS.gene016151:CDS
GTTTGAGCTAGCAAGAACTT+GGG 0.621628 1.2:-7097646 None:intergenic
TTGATGATGGGTACAGATGG+AGG 0.631832 1.2:+7097381 MS.gene016151:CDS
TTAAGAACAGCCCTAATCCA+AGG 0.633554 1.2:+7097423 MS.gene016151:CDS
CAAGCCAACGAAGTAGCAGG+TGG 0.667226 1.2:+7097094 MS.gene016151:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATGTAATAAATTAATTTCA+TGG - chr1.2:7097465-7097484 None:intergenic 10.0%
!!! TGTCTTTAACTTATAATTAT+TGG + chr1.2:7097240-7097259 MS.gene016151:intron 15.0%
!! AATATATATACCTTGGATTA+GGG - chr1.2:7097436-7097455 None:intergenic 20.0%
!! ACTAATAATATGAATATGAG+TGG + chr1.2:7097290-7097309 MS.gene016151:CDS 20.0%
! CAATATATATACCTTGGATT+AGG - chr1.2:7097437-7097456 None:intergenic 25.0%
! CTAATCCAAGGTATATATAT+TGG + chr1.2:7097435-7097454 MS.gene016151:intron 25.0%
! GTATTCCAATATATATACCT+TGG - chr1.2:7097443-7097462 None:intergenic 25.0%
! TAATTGGAAGAAGGAAATTA+AGG + chr1.2:7097319-7097338 MS.gene016151:CDS 25.0%
!! TGATTGAAATACTTGATGAT+GGG + chr1.2:7097369-7097388 MS.gene016151:CDS 25.0%
ATATGAGTGGAAACGATAAT+TGG + chr1.2:7097303-7097322 MS.gene016151:CDS 30.0%
ATATGTATATGTGTGATTGC+AGG + chr1.2:7097516-7097535 MS.gene016151:intron 30.0%
CTGATTGAAATACTTGATGA+TGG + chr1.2:7097368-7097387 MS.gene016151:CDS 30.0%
GTGATTGCAGGAATTATTAT+AGG + chr1.2:7097528-7097547 MS.gene016151:intron 30.0%
TATGTGATAACAACCTATGA+GGG + chr1.2:7097611-7097630 MS.gene016151:CDS 30.0%
TATTATAGGTGTTCAGTTGA+GGG + chr1.2:7097542-7097561 MS.gene016151:CDS 30.0%
TTATGTGATAACAACCTATG+AGG + chr1.2:7097610-7097629 MS.gene016151:CDS 30.0%
TTATTATAGGTGTTCAGTTG+AGG + chr1.2:7097541-7097560 MS.gene016151:CDS 30.0%
TTGAAAAACTAAAGACTCAG+TGG - chr1.2:7097077-7097096 None:intergenic 30.0%
! TAAGCCAGTTTTTATCTTAC+CGG + chr1.2:7097150-7097169 MS.gene016151:intron 30.0%
! TGTTACTGTTGTCATGTTTT+AGG + chr1.2:7097263-7097282 MS.gene016151:intron 30.0%
!!! CTCTCAACTCTTTTTTTTAC+AGG - chr1.2:7097572-7097591 None:intergenic 30.0%
AAAACTAAAGACTCAGTGGT+TGG - chr1.2:7097073-7097092 None:intergenic 35.0%
AAGACCGGTAAGATAAAAAC+TGG - chr1.2:7097157-7097176 None:intergenic 35.0%
AAGTAGTCAGAGAGTTCAAA+TGG - chr1.2:7097016-7097035 None:intergenic 35.0%
ATTATAGGTGTTCAGTTGAG+GGG + chr1.2:7097543-7097562 MS.gene016151:CDS 35.0%
TGAGTTTCGATGACAATGAA+TGG + chr1.2:7097035-7097054 MS.gene016151:CDS 35.0%
TGGAAACGATAATTGGAAGA+AGG + chr1.2:7097310-7097329 MS.gene016151:CDS 35.0%
TGGTTGCTAAAATCACTTTC+AGG - chr1.2:7096986-7097005 None:intergenic 35.0%
! GAGGAAGTATGGAAAGAAAA+TGG + chr1.2:7097400-7097419 MS.gene016151:CDS 35.0%
!! GATGATGAATTTGCTGTTCT+TGG - chr1.2:7096962-7096981 None:intergenic 35.0%
TTAAGAACAGCCCTAATCCA+AGG + chr1.2:7097423-7097442 MS.gene016151:CDS 40.0%
!! TACTTGATGATGGGTACAGA+TGG + chr1.2:7097378-7097397 MS.gene016151:CDS 40.0%
TGCACAAGACGAACAAAGAC+CGG - chr1.2:7097172-7097191 None:intergenic 45.0%
TTTCAAGCCAACGAAGTAGC+AGG + chr1.2:7097091-7097110 MS.gene016151:CDS 45.0%
!! GTGATTTTAGCAACCAGCAG+TGG + chr1.2:7096990-7097009 MS.gene016151:CDS 45.0%
!! TTGATGATGGGTACAGATGG+AGG + chr1.2:7097381-7097400 MS.gene016151:CDS 45.0%
!!! ATATACATAATTTTTTTAAA+CGG - chr1.2:7097220-7097239 None:intergenic 5.0%
AGAGTTCAAATGGCCACTGC+TGG - chr1.2:7097006-7097025 None:intergenic 50.0%
CAGGTGGCAGCTACATTGAA+GGG + chr1.2:7097110-7097129 MS.gene016151:CDS 50.0%
GGGTACAGATGGAGGAAGTA+TGG + chr1.2:7097389-7097408 MS.gene016151:CDS 50.0%
CAAGCCAACGAAGTAGCAGG+TGG + chr1.2:7097094-7097113 MS.gene016151:CDS 55.0%
GCAGGTGGCAGCTACATTGA+AGG + chr1.2:7097109-7097128 MS.gene016151:CDS 55.0%
GTGGGTGTGCATGCCCTCAT+AGG - chr1.2:7097627-7097646 None:intergenic 60.0%
! GCTGCCACCTGCTACTTCGT+TGG - chr1.2:7097101-7097120 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 7096944 7097661 7096944 ID=MS.gene016151
chr1.2 mRNA 7096944 7097661 7096944 ID=MS.gene016151.t1;Parent=MS.gene016151
chr1.2 exon 7096944 7097148 7096944 ID=MS.gene016151.t1.exon1;Parent=MS.gene016151.t1
chr1.2 CDS 7096944 7097148 7096944 ID=cds.MS.gene016151.t1;Parent=MS.gene016151.t1
chr1.2 exon 7097285 7097444 7097285 ID=MS.gene016151.t1.exon2;Parent=MS.gene016151.t1
chr1.2 CDS 7097285 7097444 7097285 ID=cds.MS.gene016151.t1;Parent=MS.gene016151.t1
chr1.2 exon 7097538 7097661 7097538 ID=MS.gene016151.t1.exon3;Parent=MS.gene016151.t1
chr1.2 CDS 7097538 7097661 7097538 ID=cds.MS.gene016151.t1;Parent=MS.gene016151.t1
Gene Sequence

>MS.gene016151

ATGACAGAGAAAAATCCAAGAACAGCAAATTCATCATCACCTGAAAGTGATTTTAGCAACCAGCAGTGGCCATTTGAACTCTCTGACTACTTGAGTTTCGATGACAATGAATGGCTACAAAACAATCCAACCACTGAGTCTTTAGTTTTTCAAGCCAACGAAGTAGCAGGTGGCAGCTACATTGAAGGGTCTTCTAGTTCAATCAGTAAGCCAGTTTTTATCTTACCGGTCTTTGTTCGTCTTGTGCAAAGACTTGATCACTAATAAATTTTGCCGTTTAAAAAAATTATGTATATTGTCTTTAACTTATAATTATTGGTGTTACTGTTGTCATGTTTTAGGAGATACTAATAATATGAATATGAGTGGAAACGATAATTGGAAGAAGGAAATTAAGGAGAGAGTTGCATTCAAAACAAAGTCACTGATTGAAATACTTGATGATGGGTACAGATGGAGGAAGTATGGAAAGAAAATGGTTAAGAACAGCCCTAATCCAAGGTATATATATTGGAATACCATGAAATTAATTTATTACATATAGTTTATATATGTATCATTATGAGTATATTATATGTATATGTGTGATTGCAGGAATTATTATAGGTGTTCAGTTGAGGGGTGTCCTGTAAAAAAAAGAGTTGAGAGAGATAATAATGATTCGAGTTATGTGATAACAACCTATGAGGGCATGCACACCCACCCAAGTTCTTGCTAG
Protein sequence

>MS.gene016151.t1

MTEKNPRTANSSSPESDFSNQQWPFELSDYLSFDDNEWLQNNPTTESLVFQANEVAGGSYIEGSSSSIRDTNNMNMSGNDNWKKEIKERVAFKTKSLIEILDDGYRWRKYGKKMVKNSPNPRNYYRCSVEGCPVKKRVERDNNDSSYVITTYEGMHTHPSSC