Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene016414.t1 | RHN72439.1 | 74.1 | 873 | 90 | 2 | 1 | 737 | 1 | 873 | 0.00E+00 | 1193.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene016414.t1 | Q9SZL8 | 24.0 | 601 | 312 | 7 | 79 | 537 | 77 | 674 | 1.3e-44 | 183.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene016414.t1 | A0A396J342 | 74.1 | 873 | 90 | 2 | 1 | 737 | 1 | 873 | 0.0e+00 | 1193.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene016414.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene016414.t1 | MTR_1g050570 | 87.791 | 172 | 18 | 1 | 546 | 714 | 1 | 172 | 1.51e-87 | 273 |
MS.gene016414.t1 | MTR_7g446520 | 57.895 | 228 | 74 | 2 | 58 | 281 | 71 | 280 | 1.11e-83 | 269 |
MS.gene016414.t1 | MTR_7g028855 | 52.995 | 217 | 87 | 3 | 4 | 218 | 60 | 263 | 1.10e-67 | 231 |
MS.gene016414.t1 | MTR_7g446480 | 75.410 | 122 | 30 | 0 | 152 | 273 | 140 | 261 | 1.29e-57 | 199 |
MS.gene016414.t1 | MTR_7g446510 | 74.590 | 122 | 31 | 0 | 152 | 273 | 155 | 276 | 1.46e-55 | 194 |
MS.gene016414.t1 | MTR_7g446510 | 69.231 | 52 | 16 | 0 | 280 | 331 | 1 | 52 | 7.65e-17 | 82.8 |
MS.gene016414.t1 | MTR_7g446510 | 36.885 | 122 | 63 | 2 | 401 | 522 | 48 | 155 | 8.75e-16 | 79.7 |
MS.gene016414.t1 | MTR_8g467420 | 77.165 | 127 | 29 | 0 | 2 | 128 | 5 | 131 | 2.26e-47 | 166 |
MS.gene016414.t1 | MTR_1g070355 | 32.683 | 205 | 136 | 1 | 66 | 270 | 65 | 267 | 4.43e-33 | 135 |
MS.gene016414.t1 | MTR_5g076070 | 30.392 | 204 | 140 | 1 | 67 | 270 | 45 | 246 | 1.17e-29 | 119 |
MS.gene016414.t1 | MTR_0645s0010 | 41.129 | 124 | 70 | 1 | 317 | 440 | 1 | 121 | 5.69e-27 | 106 |
MS.gene016414.t1 | MTR_6g022080 | 29.070 | 172 | 122 | 0 | 66 | 237 | 76 | 247 | 2.16e-22 | 97.4 |
MS.gene016414.t1 | MTR_0402s0040 | 32.243 | 214 | 120 | 7 | 43 | 251 | 7 | 200 | 1.90e-21 | 99.0 |
MS.gene016414.t1 | MTR_6g051425 | 28.571 | 189 | 131 | 3 | 85 | 270 | 27 | 214 | 8.67e-21 | 94.7 |
MS.gene016414.t1 | MTR_4g035820 | 28.425 | 292 | 188 | 9 | 81 | 357 | 81 | 366 | 1.30e-20 | 97.4 |
MS.gene016414.t1 | MTR_8g468460 | 41.837 | 98 | 56 | 1 | 361 | 458 | 9 | 105 | 1.71e-16 | 76.3 |
MS.gene016414.t1 | MTR_6g022070 | 30.657 | 137 | 95 | 0 | 276 | 412 | 38 | 174 | 1.63e-14 | 75.9 |
MS.gene016414.t1 | MTR_1g008290 | 30.894 | 123 | 80 | 2 | 135 | 257 | 10 | 127 | 1.78e-14 | 71.6 |
MS.gene016414.t1 | MTR_6g053140 | 28.409 | 176 | 111 | 4 | 15 | 186 | 40 | 204 | 2.25e-13 | 70.5 |
MS.gene016414.t1 | MTR_0060s0090 | 32.812 | 128 | 77 | 2 | 30 | 157 | 20 | 138 | 1.61e-12 | 66.2 |
MS.gene016414.t1 | MTR_3g080590 | 49.123 | 57 | 29 | 0 | 68 | 124 | 98 | 154 | 3.04e-11 | 62.8 |
MS.gene016414.t1 | MTR_5g015480 | 33.588 | 131 | 80 | 3 | 69 | 196 | 50 | 176 | 3.78e-11 | 64.7 |
MS.gene016414.t1 | MTR_2g101460 | 31.200 | 125 | 86 | 0 | 66 | 190 | 46 | 170 | 4.86e-11 | 63.5 |
MS.gene016414.t1 | MTR_2g101460 | 31.200 | 125 | 86 | 0 | 66 | 190 | 36 | 160 | 6.33e-11 | 62.8 |
MS.gene016414.t1 | MTR_7g074790 | 30.120 | 166 | 95 | 3 | 77 | 242 | 12 | 156 | 7.95e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene016414.t1 | AT4G38180 | 28.409 | 264 | 186 | 2 | 276 | 537 | 412 | 674 | 1.60e-30 | 129 |
MS.gene016414.t1 | AT4G38180 | 32.472 | 271 | 163 | 7 | 12 | 275 | 16 | 273 | 5.32e-23 | 105 |
MS.gene016414.t1 | AT4G15090 | 25.000 | 264 | 185 | 5 | 276 | 535 | 388 | 642 | 8.25e-24 | 107 |
MS.gene016414.t1 | AT4G15090 | 24.206 | 252 | 177 | 7 | 32 | 274 | 2 | 248 | 6.79e-12 | 69.7 |
MS.gene016414.t1 | AT4G15090 | 25.000 | 264 | 185 | 5 | 276 | 535 | 388 | 642 | 8.25e-24 | 107 |
MS.gene016414.t1 | AT4G15090 | 24.206 | 252 | 177 | 7 | 32 | 274 | 2 | 248 | 6.79e-12 | 69.7 |
MS.gene016414.t1 | AT4G15090 | 25.000 | 264 | 185 | 5 | 276 | 535 | 388 | 642 | 8.25e-24 | 107 |
MS.gene016414.t1 | AT4G15090 | 24.206 | 252 | 177 | 7 | 32 | 274 | 2 | 248 | 6.79e-12 | 69.7 |
MS.gene016414.t1 | AT4G15090 | 25.000 | 264 | 185 | 5 | 276 | 535 | 388 | 642 | 8.25e-24 | 107 |
MS.gene016414.t1 | AT4G15090 | 24.206 | 252 | 177 | 7 | 32 | 274 | 2 | 248 | 6.79e-12 | 69.7 |
MS.gene016414.t1 | AT4G15090 | 25.000 | 264 | 185 | 5 | 276 | 535 | 388 | 642 | 8.25e-24 | 107 |
MS.gene016414.t1 | AT4G15090 | 24.206 | 252 | 177 | 7 | 32 | 274 | 2 | 248 | 6.79e-12 | 69.7 |
MS.gene016414.t1 | AT4G38170 | 26.047 | 215 | 158 | 1 | 285 | 499 | 186 | 399 | 2.16e-23 | 105 |
MS.gene016414.t1 | AT3G06250 | 28.214 | 280 | 185 | 6 | 276 | 548 | 485 | 755 | 2.55e-23 | 106 |
MS.gene016414.t1 | AT3G06250 | 28.214 | 280 | 185 | 6 | 276 | 548 | 485 | 755 | 2.55e-23 | 106 |
MS.gene016414.t1 | AT3G06250 | 28.214 | 280 | 185 | 6 | 276 | 548 | 485 | 755 | 2.55e-23 | 106 |
MS.gene016414.t1 | AT3G22170 | 27.170 | 265 | 179 | 5 | 276 | 536 | 397 | 651 | 6.18e-23 | 105 |
MS.gene016414.t1 | AT3G22170 | 27.170 | 265 | 179 | 5 | 276 | 536 | 397 | 651 | 6.18e-23 | 105 |
MS.gene016414.t1 | AT5G18960 | 27.465 | 284 | 182 | 7 | 276 | 548 | 509 | 779 | 3.27e-22 | 102 |
MS.gene016414.t1 | AT5G18960 | 27.465 | 284 | 182 | 7 | 276 | 548 | 509 | 779 | 3.27e-22 | 102 |
MS.gene016414.t1 | AT2G27110 | 28.216 | 241 | 150 | 7 | 273 | 501 | 352 | 581 | 4.01e-21 | 99.4 |
MS.gene016414.t1 | AT2G27110 | 28.216 | 241 | 150 | 7 | 273 | 501 | 352 | 581 | 4.01e-21 | 99.4 |
MS.gene016414.t1 | AT2G27110 | 28.216 | 241 | 150 | 7 | 273 | 501 | 207 | 436 | 4.65e-21 | 99.0 |
MS.gene016414.t1 | AT1G76320 | 25.974 | 308 | 205 | 6 | 278 | 574 | 327 | 622 | 4.70e-21 | 98.6 |
MS.gene016414.t1 | AT1G76320 | 25.974 | 308 | 205 | 6 | 278 | 574 | 327 | 622 | 4.70e-21 | 99.0 |
MS.gene016414.t1 | AT1G76320 | 25.974 | 308 | 205 | 6 | 278 | 574 | 327 | 622 | 4.70e-21 | 99.0 |
MS.gene016414.t1 | AT1G76320 | 25.974 | 308 | 205 | 6 | 278 | 574 | 327 | 622 | 4.85e-21 | 99.0 |
MS.gene016414.t1 | AT4G19990 | 26.087 | 230 | 162 | 4 | 274 | 499 | 334 | 559 | 9.81e-20 | 94.7 |
MS.gene016414.t1 | AT4G19990 | 26.087 | 230 | 162 | 4 | 274 | 499 | 334 | 559 | 9.81e-20 | 94.7 |
MS.gene016414.t1 | AT4G19990 | 26.087 | 230 | 162 | 4 | 274 | 499 | 277 | 502 | 1.22e-19 | 94.4 |
MS.gene016414.t1 | AT4G19990 | 26.087 | 230 | 162 | 4 | 274 | 499 | 334 | 559 | 1.47e-19 | 94.4 |
MS.gene016414.t1 | AT4G19990 | 26.087 | 230 | 162 | 4 | 274 | 499 | 334 | 559 | 1.47e-19 | 94.4 |
MS.gene016414.t1 | AT4G19990 | 25.974 | 231 | 163 | 4 | 274 | 500 | 348 | 574 | 1.56e-19 | 94.0 |
MS.gene016414.t1 | AT4G19990 | 26.087 | 230 | 162 | 4 | 274 | 499 | 334 | 559 | 1.57e-19 | 94.0 |
MS.gene016414.t1 | AT2G32250 | 24.843 | 318 | 217 | 7 | 240 | 548 | 287 | 591 | 6.15e-19 | 92.4 |
MS.gene016414.t1 | AT2G32250 | 24.843 | 318 | 217 | 7 | 240 | 548 | 287 | 591 | 6.15e-19 | 92.4 |
MS.gene016414.t1 | AT2G32250 | 24.843 | 318 | 217 | 7 | 240 | 548 | 287 | 591 | 6.28e-19 | 92.4 |
MS.gene016414.t1 | AT2G32250 | 24.843 | 318 | 217 | 7 | 240 | 548 | 287 | 591 | 6.28e-19 | 92.4 |
MS.gene016414.t1 | AT2G32250 | 24.843 | 318 | 217 | 7 | 240 | 548 | 287 | 591 | 6.28e-19 | 92.4 |
MS.gene016414.t1 | AT2G32250 | 24.843 | 318 | 217 | 7 | 240 | 548 | 246 | 550 | 7.30e-19 | 92.0 |
MS.gene016414.t1 | AT2G32250 | 24.843 | 318 | 217 | 7 | 240 | 548 | 246 | 550 | 7.73e-19 | 92.0 |
MS.gene016414.t1 | AT2G32250 | 24.843 | 318 | 217 | 7 | 240 | 548 | 287 | 591 | 9.83e-19 | 91.7 |
MS.gene016414.t1 | AT1G52520 | 26.000 | 250 | 171 | 5 | 275 | 513 | 407 | 653 | 2.79e-17 | 86.7 |
MS.gene016414.t1 | AT1G80010 | 25.896 | 251 | 165 | 6 | 275 | 512 | 432 | 674 | 1.18e-16 | 84.7 |
MS.gene016414.t1 | AT1G10240 | 30.918 | 207 | 125 | 7 | 47 | 239 | 14 | 216 | 3.10e-15 | 80.1 |
MS.gene016414.t1 | AT1G10240 | 25.000 | 268 | 154 | 8 | 273 | 518 | 384 | 626 | 4.24e-14 | 76.6 |
MS.gene016414.t1 | AT1G10240 | 30.918 | 207 | 125 | 7 | 47 | 239 | 14 | 216 | 3.10e-15 | 80.1 |
MS.gene016414.t1 | AT1G10240 | 25.000 | 268 | 154 | 8 | 273 | 518 | 384 | 626 | 4.24e-14 | 76.6 |
MS.gene016414.t1 | AT5G28530 | 29.193 | 161 | 110 | 3 | 81 | 238 | 61 | 220 | 8.54e-14 | 75.5 |
MS.gene016414.t1 | AT5G28530 | 29.193 | 161 | 110 | 3 | 81 | 238 | 61 | 220 | 8.67e-14 | 75.5 |
MS.gene016414.t1 | AT5G28530 | 29.193 | 161 | 110 | 3 | 81 | 238 | 61 | 220 | 1.01e-13 | 75.5 |
MS.gene016414.t1 | AT5G28530 | 29.193 | 161 | 110 | 3 | 81 | 238 | 61 | 220 | 1.07e-13 | 75.1 |
MS.gene016414.t1 | AT5G28530 | 29.193 | 161 | 110 | 3 | 81 | 238 | 61 | 220 | 1.07e-13 | 75.1 |
Find 111 sgRNAs with CRISPR-Local
Find 185 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAAATTCTTAAACTTGAATT+TGG | 0.181995 | 8.2:-58080783 | MS.gene016414:CDS |
ACCACCATGAAGTCCATAAT+TGG | 0.210507 | 8.2:+58078341 | None:intergenic |
CAAGCAATTTACCCCAATTA+TGG | 0.222640 | 8.2:-58078354 | MS.gene016414:CDS |
GTTGCGTTCTTCTTCTTCTT+TGG | 0.224742 | 8.2:+58078863 | None:intergenic |
TATTTACGTGATAAGTTCTT+TGG | 0.228072 | 8.2:-58079643 | MS.gene016414:CDS |
GTCATGAATGTTGCTGGTTT+TGG | 0.255328 | 8.2:-58078282 | MS.gene016414:CDS |
CGGAGCAATTTGAGGAGTTT+TGG | 0.270030 | 8.2:-58079750 | MS.gene016414:CDS |
AATCAAAACCTGTCATATAA+TGG | 0.273083 | 8.2:-58080382 | MS.gene016414:CDS |
AGAAGTTAAAGATGAAATTA+TGG | 0.274889 | 8.2:-58079386 | MS.gene016414:CDS |
CTGTCATATAATGGGATATA+TGG | 0.287437 | 8.2:-58080373 | MS.gene016414:CDS |
AACTTCCTGTGTTGGGCTCT+TGG | 0.288676 | 8.2:-58078310 | MS.gene016414:CDS |
CTTGTGCTAGCATTGCCATT+AGG | 0.324197 | 8.2:+58078504 | None:intergenic |
GCCTTGCTTCGCAATTTGTT+CGG | 0.326898 | 8.2:+58080568 | None:intergenic |
TACCCCAATTATGGACTTCA+TGG | 0.332590 | 8.2:-58078345 | MS.gene016414:CDS |
CCTTGCTTCGCAATTTGTTC+GGG | 0.333508 | 8.2:+58080569 | None:intergenic |
ATGATTGAACTTGCTCGATT+TGG | 0.365589 | 8.2:-58079064 | MS.gene016414:CDS |
CCATTAGGAAAGGTGATGTT+AGG | 0.366141 | 8.2:-58080704 | MS.gene016414:CDS |
ATCAAAACCTGTCATATAAT+GGG | 0.369316 | 8.2:-58080381 | MS.gene016414:CDS |
TGATCACATACCAGAATGTT+TGG | 0.370163 | 8.2:-58079161 | MS.gene016414:CDS |
TACTCAGTCTAAAAGTTATC+AGG | 0.373452 | 8.2:-58078921 | MS.gene016414:CDS |
ATTTACGTGGGGTTACTTCA+TGG | 0.380615 | 8.2:+58080481 | None:intergenic |
TCAGCTGTCTCCGGAATCTC+TGG | 0.384192 | 8.2:+58078447 | None:intergenic |
GGTTGAACTACATTTGTAAC+TGG | 0.389125 | 8.2:+58078420 | None:intergenic |
ACTTCAATATAATGAAGAAT+TGG | 0.390431 | 8.2:-58078663 | MS.gene016414:CDS |
GTAAAATTTCTGAAGCAGAT+AGG | 0.391444 | 8.2:-58080434 | MS.gene016414:CDS |
GATCTCTGCTGTGTAAATTC+TGG | 0.392583 | 8.2:+58079414 | None:intergenic |
CCTAACATCACCTTTCCTAA+TGG | 0.392597 | 8.2:+58080704 | None:intergenic |
GCACAAGTCATGAATGTTGC+TGG | 0.402938 | 8.2:-58078288 | MS.gene016414:CDS |
TCATACCGCAAGGCATTGTT+TGG | 0.406615 | 8.2:-58078801 | MS.gene016414:intron |
CCACCATGAAGTCCATAATT+GGG | 0.409599 | 8.2:+58078342 | None:intergenic |
CAGTTTGTGTGCAACAAGAA+TGG | 0.415144 | 8.2:-58080651 | MS.gene016414:CDS |
GAGACAAGAAGCACTTATCT+AGG | 0.423504 | 8.2:-58080623 | MS.gene016414:CDS |
AATCATCAACTTCCTGTGTT+GGG | 0.424191 | 8.2:-58078317 | MS.gene016414:CDS |
CGTGTCATAACCAAACATTC+TGG | 0.425974 | 8.2:+58079151 | None:intergenic |
GGAACACCACAAAGACTGTT+TGG | 0.430519 | 8.2:-58081003 | MS.gene016414:CDS |
TTCTGAACAGCGATTCCAAT+GGG | 0.432579 | 8.2:-58079102 | MS.gene016414:CDS |
TGACTTTAAATCAAAATTCA+CGG | 0.435713 | 8.2:-58079482 | MS.gene016414:CDS |
GTATTCTTCTTCACTGGAAT+CGG | 0.437019 | 8.2:+58080977 | None:intergenic |
ATCTGTGTATTCTTCTTCAC+TGG | 0.444466 | 8.2:+58080971 | None:intergenic |
TAAATTGCTTGCATTTCCAT+TGG | 0.446330 | 8.2:+58078366 | None:intergenic |
CCAGGTTGCAACACATTCAC+AGG | 0.453864 | 8.2:+58078396 | None:intergenic |
GATACCATGGTTTATACATT+GGG | 0.461449 | 8.2:-58079322 | MS.gene016414:CDS |
TGAACTTGAAGGAAATGCTT+GGG | 0.462518 | 8.2:-58079707 | MS.gene016414:CDS |
GAATCATCAACTTCCTGTGT+TGG | 0.463071 | 8.2:-58078318 | MS.gene016414:CDS |
ATTCAGAAGAATGAACTTGA+AGG | 0.466546 | 8.2:-58079718 | MS.gene016414:CDS |
ATTAGCATCTATTTCCCCAT+TGG | 0.467480 | 8.2:+58079087 | None:intergenic |
AGCACTTATCTAGGAATGAT+AGG | 0.468246 | 8.2:-58080614 | MS.gene016414:CDS |
AGTTTGTGTGCAACAAGAAT+GGG | 0.470588 | 8.2:-58080650 | MS.gene016414:CDS |
TAAAATTTCTGAAGCAGATA+GGG | 0.473779 | 8.2:-58080433 | MS.gene016414:CDS |
AAGAATTTCATCAGAGGCAA+TGG | 0.477228 | 8.2:+58080797 | None:intergenic |
ATGAACTTGAAGGAAATGCT+TGG | 0.479360 | 8.2:-58079708 | MS.gene016414:CDS |
GGGATATATGGTTGCTCAGA+AGG | 0.480775 | 8.2:-58080361 | MS.gene016414:CDS |
CATATATCCCATTATATGAC+AGG | 0.494595 | 8.2:+58080374 | None:intergenic |
CCTTTGCTCTTCACAGTGAC+CGG | 0.495645 | 8.2:+58078890 | None:intergenic |
GGATACCATGGTTTATACAT+TGG | 0.504775 | 8.2:-58079323 | MS.gene016414:CDS |
AAGTTATCAGGTAGGTGATC+CGG | 0.508654 | 8.2:-58078909 | MS.gene016414:CDS |
ACTGGCAAATCAGCTGTCTC+CGG | 0.514020 | 8.2:+58078438 | None:intergenic |
TTGGGAAAATATCGTGAGAA+AGG | 0.514905 | 8.2:-58079304 | MS.gene016414:CDS |
GATGCTGAAGATGATGTTGA+TGG | 0.520081 | 8.2:-58080912 | MS.gene016414:CDS |
CGTTGGACAAAGAACGCAAA+AGG | 0.525733 | 8.2:-58079130 | MS.gene016414:CDS |
CGGAGTCCAAACAGTCTTTG+TGG | 0.529107 | 8.2:+58080997 | None:intergenic |
ATTTCCATTGGAAATTTACC+AGG | 0.529349 | 8.2:+58078378 | None:intergenic |
TATCGTTATGGAAAATGCAA+AGG | 0.529410 | 8.2:-58080732 | MS.gene016414:CDS |
CAAGCAAAAGAAATGTAAAG+AGG | 0.532177 | 8.2:-58078481 | MS.gene016414:CDS |
CAAAACTCCTCAAATTGCTC+CGG | 0.533339 | 8.2:+58079751 | None:intergenic |
GCGATGCATTAGCAAGTGAC+AGG | 0.533703 | 8.2:-58080836 | MS.gene016414:CDS |
CTTGATGCTCTTCAATCACA+TGG | 0.535182 | 8.2:-58080405 | MS.gene016414:CDS |
TGATTGAAGAGCATCAAGTT+GGG | 0.536427 | 8.2:+58080410 | None:intergenic |
AAGGGTGGATATACTGATGT+AGG | 0.538008 | 8.2:-58080342 | MS.gene016414:CDS |
GTGATTGAAGAGCATCAAGT+TGG | 0.540889 | 8.2:+58080409 | None:intergenic |
CCTGTGAATGTGTTGCAACC+TGG | 0.546145 | 8.2:-58078396 | MS.gene016414:CDS |
AAAGATGAAATTATGGATGC+TGG | 0.553017 | 8.2:-58079379 | MS.gene016414:CDS |
CCCGAACAAATTGCGAAGCA+AGG | 0.553648 | 8.2:-58080569 | MS.gene016414:CDS |
GCAACCTGGTAAATTTCCAA+TGG | 0.569433 | 8.2:-58078382 | MS.gene016414:CDS |
GATGTTAGGCGCAATAGTAG+TGG | 0.581865 | 8.2:-58080690 | MS.gene016414:CDS |
AAGACATATTCTAGAGCCAA+AGG | 0.582373 | 8.2:-58079574 | MS.gene016414:CDS |
AGCATATAACATTGGATCGG+TGG | 0.585153 | 8.2:+58080215 | None:intergenic |
GGATATATGGTTGCTCAGAA+GGG | 0.589834 | 8.2:-58080360 | MS.gene016414:CDS |
GATAGCTTCACATTGAGATG+TGG | 0.595390 | 8.2:+58079609 | None:intergenic |
TTTCTGAACAGCGATTCCAA+TGG | 0.598192 | 8.2:-58079103 | MS.gene016414:CDS |
GCAAGTGTGTAAATTTACGT+GGG | 0.600179 | 8.2:+58080469 | None:intergenic |
TGATGAATCAGTTCAACAAG+AGG | 0.603374 | 8.2:-58080868 | MS.gene016414:CDS |
CCGGTCACTGTGAAGAGCAA+AGG | 0.613504 | 8.2:-58078890 | MS.gene016414:CDS |
TATATGGTTGCTCAGAAGGG+TGG | 0.613989 | 8.2:-58080357 | MS.gene016414:CDS |
TTCAGCATATAACATTGGAT+CGG | 0.614583 | 8.2:+58080212 | None:intergenic |
TGCTGGTGCAATACGTCTCG+AGG | 0.619998 | 8.2:-58079362 | MS.gene016414:CDS |
AAGTTTAAGAATTTCATCAG+AGG | 0.626746 | 8.2:+58080791 | None:intergenic |
CACCATGAAGTCCATAATTG+GGG | 0.627752 | 8.2:+58078343 | None:intergenic |
CCCAATTATGGACTTCATGG+TGG | 0.629190 | 8.2:-58078342 | MS.gene016414:CDS |
GTGCATTACAAAGCTAAACA+AGG | 0.632644 | 8.2:-58080540 | MS.gene016414:CDS |
TCGTATTCAGCATATAACAT+TGG | 0.632685 | 8.2:+58080207 | None:intergenic |
CAGTCTAAAAGTTATCAGGT+AGG | 0.641408 | 8.2:-58078917 | MS.gene016414:CDS |
TGCAAGTGTGTAAATTTACG+TGG | 0.643723 | 8.2:+58080468 | None:intergenic |
ATGCGCGATGTCATTAAAGA+CGG | 0.646118 | 8.2:-58080279 | MS.gene016414:CDS |
AAAGTACAAGTCATACCGCA+AGG | 0.649575 | 8.2:-58078811 | MS.gene016414:CDS |
GAACTTATCACGTAAATATG+CGG | 0.655600 | 8.2:+58079648 | None:intergenic |
TGTAGACTATTCGAGTCACG+TGG | 0.658455 | 8.2:-58079229 | MS.gene016414:CDS |
TTGTGCCAAGAGCCCAACAC+AGG | 0.660751 | 8.2:+58078305 | None:intergenic |
TGCATTACAAAGCTAAACAA+GGG | 0.661066 | 8.2:-58080539 | MS.gene016414:CDS |
AATGTTTGGTTATGACACGT+TGG | 0.662725 | 8.2:-58079147 | MS.gene016414:CDS |
ATATGCGAACAAGTCACTGT+GGG | 0.664385 | 8.2:-58079674 | MS.gene016414:CDS |
GATGAATCAGTTCAACAAGA+GGG | 0.669122 | 8.2:-58080867 | MS.gene016414:CDS |
CGCAGGTGAGTTGACAACAC+AGG | 0.673245 | 8.2:+58079457 | None:intergenic |
CATCACTCTCAATCAAACGC+AGG | 0.673784 | 8.2:+58079440 | None:intergenic |
GGTTGCAACACATTCACAGG+AGG | 0.686316 | 8.2:+58078399 | None:intergenic |
CAAGTGTGTAAATTTACGTG+GGG | 0.688606 | 8.2:+58080470 | None:intergenic |
GTAGTGGAATAATTACAATG+AGG | 0.704741 | 8.2:-58080674 | MS.gene016414:CDS |
TCTGAACAGCGATTCCAATG+GGG | 0.714485 | 8.2:-58079101 | MS.gene016414:CDS |
CATATGCGAACAAGTCACTG+TGG | 0.716941 | 8.2:-58079675 | MS.gene016414:CDS |
AATTACCAAACAATGCCTTG+CGG | 0.726793 | 8.2:+58078796 | None:intergenic |
GTAGACTATTCGAGTCACGT+GGG | 0.777031 | 8.2:-58079228 | MS.gene016414:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ACATTATAATTCTTAATTCA+TGG | + | chr8.2:58080498-58080517 | None:intergenic | 15.0% |
!!! | TATGAATTTTATTATCGTTA+TGG | - | chr8.2:58078494-58078513 | MS.gene016414:CDS | 15.0% |
!! | AAAAAGAAAAGAAAACCTAA+TGG | - | chr8.2:58080719-58080738 | MS.gene016414:CDS | 20.0% |
!! | ACTTCAATATAATGAAGAAT+TGG | - | chr8.2:58080575-58080594 | MS.gene016414:CDS | 20.0% |
!! | AGAAGTTAAAGATGAAATTA+TGG | - | chr8.2:58079852-58079871 | MS.gene016414:intron | 20.0% |
!! | ATCTAATATTGTTGCATAAA+AGG | + | chr8.2:58080660-58080679 | None:intergenic | 20.0% |
!! | GAAATTCTTAAACTTGAATT+TGG | - | chr8.2:58078455-58078474 | MS.gene016414:CDS | 20.0% |
!! | TGACTTTAAATCAAAATTCA+CGG | - | chr8.2:58079756-58079775 | MS.gene016414:CDS | 20.0% |
!!! | AAAAAAGAATGGTGTTTTTA+GGG | - | chr8.2:58080239-58080258 | MS.gene016414:CDS | 20.0% |
!!! | AAATTCAAAAATTTTGCCTT+TGG | + | chr8.2:58079683-58079702 | None:intergenic | 20.0% |
!!! | ATTTATGCATAATTTTGAAC+AGG | - | chr8.2:58079699-58079718 | MS.gene016414:CDS | 20.0% |
!!! | GCAATTTTTTTTTTTTTTGC+AGG | - | chr8.2:58080536-58080555 | MS.gene016414:CDS | 20.0% |
!!! | TTTCCATACATTCTAAAAAA+CGG | + | chr8.2:58079285-58079304 | None:intergenic | 20.0% |
! | AAGTTTAAGAATTTCATCAG+AGG | + | chr8.2:58078450-58078469 | None:intergenic | 25.0% |
! | AATCAAAACCTGTCATATAA+TGG | - | chr8.2:58078856-58078875 | MS.gene016414:CDS | 25.0% |
! | ATCAAAACCTGTCATATAAT+GGG | - | chr8.2:58078857-58078876 | MS.gene016414:CDS | 25.0% |
! | TATAAAGAAAACACCATTTC+TGG | - | chr8.2:58079429-58079448 | MS.gene016414:CDS | 25.0% |
! | TATTTACGTGATAAGTTCTT+TGG | - | chr8.2:58079595-58079614 | MS.gene016414:CDS | 25.0% |
!! | AAGAATGAAAAGACTGTTTT+GGG | - | chr8.2:58079069-58079088 | MS.gene016414:CDS | 25.0% |
!! | AATGTACTCAAATTTTACAC+CGG | - | chr8.2:58079468-58079487 | MS.gene016414:CDS | 25.0% |
!! | ACAAATATACCTTCTCTTTT+TGG | + | chr8.2:58080629-58080648 | None:intergenic | 25.0% |
!! | CAAAAAAGAATGGTGTTTTT+AGG | - | chr8.2:58080238-58080257 | MS.gene016414:CDS | 25.0% |
!! | CATAATTTTGAACAGGTTTT+GGG | - | chr8.2:58079706-58079725 | MS.gene016414:CDS | 25.0% |
!!! | AAAAACACCATTCTTTTTTG+AGG | + | chr8.2:58080238-58080257 | None:intergenic | 25.0% |
!!! | AGGTCTGATTATTTTTGTTT+TGG | - | chr8.2:58079106-58079125 | MS.gene016414:CDS | 25.0% |
!!! | TAAAATTTCTGAAGCAGATA+GGG | - | chr8.2:58078805-58078824 | MS.gene016414:CDS | 25.0% |
AAACAATCGAGTCATATAAG+TGG | - | chr8.2:58079251-58079270 | MS.gene016414:CDS | 30.0% | |
AAAGAAGCCTCAAAAAAGAA+TGG | - | chr8.2:58080228-58080247 | MS.gene016414:CDS | 30.0% | |
AAAGATGAAATTATGGATGC+TGG | - | chr8.2:58079859-58079878 | MS.gene016414:intron | 30.0% | |
AACAAAAATTCCAGAGATTC+CGG | - | chr8.2:58080781-58080800 | MS.gene016414:CDS | 30.0% | |
AACAATCGAGTCATATAAGT+GGG | - | chr8.2:58079252-58079271 | MS.gene016414:CDS | 30.0% | |
ACAAAAAAGACATGACAACA+TGG | + | chr8.2:58080039-58080058 | None:intergenic | 30.0% | |
ATTCAGAAGAATGAACTTGA+AGG | - | chr8.2:58079520-58079539 | MS.gene016414:CDS | 30.0% | |
ATTTCCATTGGAAATTTACC+AGG | + | chr8.2:58080863-58080882 | None:intergenic | 30.0% | |
CAAATATAATGGTCTGTGAA+TGG | + | chr8.2:58079210-58079229 | None:intergenic | 30.0% | |
CAAGCAAAAGAAATGTAAAG+AGG | - | chr8.2:58080757-58080776 | MS.gene016414:CDS | 30.0% | |
CATATATCCCATTATATGAC+AGG | + | chr8.2:58078867-58078886 | None:intergenic | 30.0% | |
CATTCACAGACCATTATATT+TGG | - | chr8.2:58079208-58079227 | MS.gene016414:CDS | 30.0% | |
GAACTTATCACGTAAATATG+CGG | + | chr8.2:58079593-58079612 | None:intergenic | 30.0% | |
GATACCATGGTTTATACATT+GGG | - | chr8.2:58079916-58079935 | MS.gene016414:intron | 30.0% | |
TAAATTGCTTGCATTTCCAT+TGG | + | chr8.2:58080875-58080894 | None:intergenic | 30.0% | |
TACTCAGTCTAAAAGTTATC+AGG | - | chr8.2:58080317-58080336 | MS.gene016414:CDS | 30.0% | |
TATCGTTATGGAAAATGCAA+AGG | - | chr8.2:58078506-58078525 | MS.gene016414:CDS | 30.0% | |
TCGTATTCAGCATATAACAT+TGG | + | chr8.2:58079034-58079053 | None:intergenic | 30.0% | |
TGCATTACAAAGCTAAACAA+GGG | - | chr8.2:58078699-58078718 | MS.gene016414:intron | 30.0% | |
TTCAGCATATAACATTGGAT+CGG | + | chr8.2:58079029-58079048 | None:intergenic | 30.0% | |
! | AAAGGTTTTTCCATTAGGAA+AGG | - | chr8.2:58078524-58078543 | MS.gene016414:intron | 30.0% |
! | AATGCAAAGGTTTTTCCATT+AGG | - | chr8.2:58078519-58078538 | MS.gene016414:CDS | 30.0% |
! | ATCCGTTGTGTATATTTTCT+GGG | - | chr8.2:58079176-58079195 | MS.gene016414:CDS | 30.0% |
! | CAGAAATTTTACGATACAGT+GGG | + | chr8.2:58078796-58078815 | None:intergenic | 30.0% |
! | CTGTCATATAATGGGATATA+TGG | - | chr8.2:58078865-58078884 | MS.gene016414:CDS | 30.0% |
! | GAAGAATGAAAAGACTGTTT+TGG | - | chr8.2:58079068-58079087 | MS.gene016414:CDS | 30.0% |
! | GCATAATTTTGAACAGGTTT+TGG | - | chr8.2:58079705-58079724 | MS.gene016414:CDS | 30.0% |
! | GTAGTGGAATAATTACAATG+AGG | - | chr8.2:58078564-58078583 | MS.gene016414:intron | 30.0% |
! | TATCCGTTGTGTATATTTTC+TGG | - | chr8.2:58079175-58079194 | MS.gene016414:CDS | 30.0% |
! | TCAGAAATTTTACGATACAG+TGG | + | chr8.2:58078797-58078816 | None:intergenic | 30.0% |
! | TTTTCCCAATGTATAAACCA+TGG | + | chr8.2:58079923-58079942 | None:intergenic | 30.0% |
!! | GTAAAATTTCTGAAGCAGAT+AGG | - | chr8.2:58078804-58078823 | MS.gene016414:CDS | 30.0% |
!!! | GAACCGTTTTTTAGAATGTA+TGG | - | chr8.2:58079279-58079298 | MS.gene016414:CDS | 30.0% |
!!! | TCATGTCTTTTTTGTGATGA+AGG | - | chr8.2:58080044-58080063 | MS.gene016414:intron | 30.0% |
AAGAATTTCATCAGAGGCAA+TGG | + | chr8.2:58078444-58078463 | None:intergenic | 35.0% | |
AATCATCAACTTCCTGTGTT+GGG | - | chr8.2:58080921-58080940 | MS.gene016414:CDS | 35.0% | |
AATGAGGGAAGCTATTAAAC+AGG | - | chr8.2:58079345-58079364 | MS.gene016414:CDS | 35.0% | |
AATGTTTGGTTATGACACGT+TGG | - | chr8.2:58080091-58080110 | MS.gene016414:intron | 35.0% | |
AATTACCAAACAATGCCTTG+CGG | + | chr8.2:58080445-58080464 | None:intergenic | 35.0% | |
AGCACTTATCTAGGAATGAT+AGG | - | chr8.2:58078624-58078643 | MS.gene016414:CDS | 35.0% | |
AGTTTGTGTGCAACAAGAAT+GGG | - | chr8.2:58078588-58078607 | MS.gene016414:intron | 35.0% | |
ATATAATGGTCTGTGAATGG+TGG | + | chr8.2:58079207-58079226 | None:intergenic | 35.0% | |
ATCTGTGTATTCTTCTTCAC+TGG | + | chr8.2:58078270-58078289 | None:intergenic | 35.0% | |
ATGAACTTGAAGGAAATGCT+TGG | - | chr8.2:58079530-58079549 | MS.gene016414:CDS | 35.0% | |
ATTAGCATCTATTTCCCCAT+TGG | + | chr8.2:58080154-58080173 | None:intergenic | 35.0% | |
CAACGCAACACCAAATATAA+TGG | + | chr8.2:58079221-58079240 | None:intergenic | 35.0% | |
CAAGCAATTTACCCCAATTA+TGG | - | chr8.2:58080884-58080903 | MS.gene016414:CDS | 35.0% | |
CAAGTGTGTAAATTTACGTG+GGG | + | chr8.2:58078771-58078790 | None:intergenic | 35.0% | |
CACCCAGAAAATATACACAA+CGG | + | chr8.2:58079181-58079200 | None:intergenic | 35.0% | |
CAGTCTAAAAGTTATCAGGT+AGG | - | chr8.2:58080321-58080340 | MS.gene016414:CDS | 35.0% | |
GAATACGATGTCAACAATGA+TGG | - | chr8.2:58079046-58079065 | MS.gene016414:CDS | 35.0% | |
GATGAATCAGTTCAACAAGA+GGG | - | chr8.2:58078371-58078390 | MS.gene016414:CDS | 35.0% | |
GCAAGTGTGTAAATTTACGT+GGG | + | chr8.2:58078772-58078791 | None:intergenic | 35.0% | |
GGATACCATGGTTTATACAT+TGG | - | chr8.2:58079915-58079934 | MS.gene016414:intron | 35.0% | |
GGTTGAACTACATTTGTAAC+TGG | + | chr8.2:58080821-58080840 | None:intergenic | 35.0% | |
GTATTCTTCTTCACTGGAAT+CGG | + | chr8.2:58078264-58078283 | None:intergenic | 35.0% | |
GTGCATTACAAAGCTAAACA+AGG | - | chr8.2:58078698-58078717 | MS.gene016414:intron | 35.0% | |
TGAACTTGAAGGAAATGCTT+GGG | - | chr8.2:58079531-58079550 | MS.gene016414:CDS | 35.0% | |
TGATCACATACCAGAATGTT+TGG | - | chr8.2:58080077-58080096 | MS.gene016414:intron | 35.0% | |
TGATGAATCAGTTCAACAAG+AGG | - | chr8.2:58078370-58078389 | MS.gene016414:CDS | 35.0% | |
TGCAAGTGTGTAAATTTACG+TGG | + | chr8.2:58078773-58078792 | None:intergenic | 35.0% | |
TTCTTTACGCCAAAAAGAGA+AGG | - | chr8.2:58080617-58080636 | MS.gene016414:CDS | 35.0% | |
TTGGGAAAATATCGTGAGAA+AGG | - | chr8.2:58079934-58079953 | MS.gene016414:intron | 35.0% | |
! | AAAGAAAACACCATTTCTGG+AGG | - | chr8.2:58079432-58079451 | MS.gene016414:CDS | 35.0% |
! | AAGAAAACACCATTTCTGGA+GGG | - | chr8.2:58079433-58079452 | MS.gene016414:CDS | 35.0% |
! | ATGATTGAACTTGCTCGATT+TGG | - | chr8.2:58080174-58080193 | MS.gene016414:intron | 35.0% |
!! | AAGACATATTCTAGAGCCAA+AGG | - | chr8.2:58079664-58079683 | MS.gene016414:CDS | 35.0% |
!! | TATATTTGGTGTTGCGTTGT+TGG | - | chr8.2:58079222-58079241 | MS.gene016414:CDS | 35.0% |
!! | TGATTGAAGAGCATCAAGTT+GGG | + | chr8.2:58078831-58078850 | None:intergenic | 35.0% |
!!! | AATTTTGAACAGGTTTTGGG+AGG | - | chr8.2:58079709-58079728 | MS.gene016414:CDS | 35.0% |
!!! | CTTTTTTGTGATGAAGGAAG+AGG | - | chr8.2:58080050-58080069 | MS.gene016414:intron | 35.0% |
!!! | GTAGTGTCTAGTTTTGTAGA+GGG | - | chr8.2:58078728-58078747 | MS.gene016414:intron | 35.0% |
!!! | TAGTGTCTAGTTTTGTAGAG+GGG | - | chr8.2:58078729-58078748 | MS.gene016414:intron | 35.0% |
!!! | TGGTGTTTTTAGGGACATAA+TGG | - | chr8.2:58080248-58080267 | MS.gene016414:CDS | 35.0% |
!!! | TGTAGTGTCTAGTTTTGTAG+AGG | - | chr8.2:58078727-58078746 | MS.gene016414:intron | 35.0% |
!!! | TTTTTGTTTTGGCGACGTTT+TGG | - | chr8.2:58079117-58079136 | MS.gene016414:CDS | 35.0% |
AAAGTACAAGTCATACCGCA+AGG | - | chr8.2:58080427-58080446 | MS.gene016414:CDS | 40.0% | |
AAGGGTGGATATACTGATGT+AGG | - | chr8.2:58078896-58078915 | MS.gene016414:CDS | 40.0% | |
AAGTAAGTTCCCAAAAGCAG+TGG | - | chr8.2:58079303-58079322 | MS.gene016414:CDS | 40.0% | |
AAGTTATCAGGTAGGTGATC+CGG | - | chr8.2:58080329-58080348 | MS.gene016414:CDS | 40.0% | |
ACCACCATGAAGTCCATAAT+TGG | + | chr8.2:58080900-58080919 | None:intergenic | 40.0% | |
AGATGGAGATGGATCAATGA+GGG | - | chr8.2:58079330-58079349 | MS.gene016414:CDS | 40.0% | |
AGCATATAACATTGGATCGG+TGG | + | chr8.2:58079026-58079045 | None:intergenic | 40.0% | |
ATAAGCGATGAGATGCATCA+GGG | + | chr8.2:58079375-58079394 | None:intergenic | 40.0% | |
ATATGCGAACAAGTCACTGT+GGG | - | chr8.2:58079564-58079583 | MS.gene016414:CDS | 40.0% | |
ATGCGCGATGTCATTAAAGA+CGG | - | chr8.2:58078959-58078978 | MS.gene016414:CDS | 40.0% | |
ATTTACGTGGGGTTACTTCA+TGG | + | chr8.2:58078760-58078779 | None:intergenic | 40.0% | |
CAAAACTCCTCAAATTGCTC+CGG | + | chr8.2:58079490-58079509 | None:intergenic | 40.0% | |
CACCATGAAGTCCATAATTG+GGG | + | chr8.2:58080898-58080917 | None:intergenic | 40.0% | |
CAGTTTGTGTGCAACAAGAA+TGG | - | chr8.2:58078587-58078606 | MS.gene016414:intron | 40.0% | |
CCACCATGAAGTCCATAATT+GGG | + | chr8.2:58080899-58080918 | None:intergenic | 40.0% | |
CCATTAGGAAAGGTGATGTT+AGG | - | chr8.2:58078534-58078553 | MS.gene016414:intron | 40.0% | |
CCTAACATCACCTTTCCTAA+TGG | + | chr8.2:58078537-58078556 | None:intergenic | 40.0% | |
CGTGTCATAACCAAACATTC+TGG | + | chr8.2:58080090-58080109 | None:intergenic | 40.0% | |
CTCGAGGACAAAAAATGTGT+GGG | - | chr8.2:58079892-58079911 | MS.gene016414:intron | 40.0% | |
CTTGATGCTCTTCAATCACA+TGG | - | chr8.2:58078833-58078852 | MS.gene016414:CDS | 40.0% | |
GAATCATCAACTTCCTGTGT+TGG | - | chr8.2:58080920-58080939 | MS.gene016414:CDS | 40.0% | |
GATAGCTTCACATTGAGATG+TGG | + | chr8.2:58079632-58079651 | None:intergenic | 40.0% | |
GATCTCTGCTGTGTAAATTC+TGG | + | chr8.2:58079827-58079846 | None:intergenic | 40.0% | |
GATGCTGAAGATGATGTTGA+TGG | - | chr8.2:58078326-58078345 | MS.gene016414:CDS | 40.0% | |
GCAACCTGGTAAATTTCCAA+TGG | - | chr8.2:58080856-58080875 | MS.gene016414:CDS | 40.0% | |
GGATATATGGTTGCTCAGAA+GGG | - | chr8.2:58078878-58078897 | MS.gene016414:CDS | 40.0% | |
GTTGCGTTCTTCTTCTTCTT+TGG | + | chr8.2:58080378-58080397 | None:intergenic | 40.0% | |
TACCCCAATTATGGACTTCA+TGG | - | chr8.2:58080893-58080912 | MS.gene016414:CDS | 40.0% | |
TCGAGGACAAAAAATGTGTG+GGG | - | chr8.2:58079893-58079912 | MS.gene016414:intron | 40.0% | |
TCTCGAGGACAAAAAATGTG+TGG | - | chr8.2:58079891-58079910 | MS.gene016414:intron | 40.0% | |
TTCTGAACAGCGATTCCAAT+GGG | - | chr8.2:58080136-58080155 | MS.gene016414:intron | 40.0% | |
TTTCTAAACCCCTCCAGAAA+TGG | + | chr8.2:58079445-58079464 | None:intergenic | 40.0% | |
TTTCTGAACAGCGATTCCAA+TGG | - | chr8.2:58080135-58080154 | MS.gene016414:intron | 40.0% | |
! | AGAAAACACCATTTCTGGAG+GGG | - | chr8.2:58079434-58079453 | MS.gene016414:CDS | 40.0% |
! | TTTTACACCGGAGCAATTTG+AGG | - | chr8.2:58079480-58079499 | MS.gene016414:CDS | 40.0% |
!! | AAAAGACTGTTTTGGGCTGA+TGG | - | chr8.2:58079076-58079095 | MS.gene016414:CDS | 40.0% |
!! | AAAGACTGTTTTGGGCTGAT+GGG | - | chr8.2:58079077-58079096 | MS.gene016414:CDS | 40.0% |
!! | CATCTGTTACCACTGCTTTT+GGG | + | chr8.2:58079315-58079334 | None:intergenic | 40.0% |
!! | GAGACAAGAAGCACTTATCT+AGG | - | chr8.2:58078615-58078634 | MS.gene016414:intron | 40.0% |
!! | GTGATTGAAGAGCATCAAGT+TGG | + | chr8.2:58078832-58078851 | None:intergenic | 40.0% |
!!! | GTCATGAATGTTGCTGGTTT+TGG | - | chr8.2:58080956-58080975 | MS.gene016414:CDS | 40.0% |
AAAATGTGTGGGGGATACCA+TGG | - | chr8.2:58079903-58079922 | MS.gene016414:intron | 45.0% | |
CAGATGGAGATGGATCAATG+AGG | - | chr8.2:58079329-58079348 | MS.gene016414:CDS | 45.0% | |
CATAAGCGATGAGATGCATC+AGG | + | chr8.2:58079376-58079395 | None:intergenic | 45.0% | |
CATATGCGAACAAGTCACTG+TGG | - | chr8.2:58079563-58079582 | MS.gene016414:CDS | 45.0% | |
CATCACTCTCAATCAAACGC+AGG | + | chr8.2:58079801-58079820 | None:intergenic | 45.0% | |
CCAAAAGCAGTGGTAACAGA+TGG | - | chr8.2:58079313-58079332 | MS.gene016414:CDS | 45.0% | |
CCCAATTATGGACTTCATGG+TGG | - | chr8.2:58080896-58080915 | MS.gene016414:CDS | 45.0% | |
CGAGGACAAAAAATGTGTGG+GGG | - | chr8.2:58079894-58079913 | MS.gene016414:intron | 45.0% | |
CGCATTCTTGTGTAAATGCC+AGG | + | chr8.2:58079401-58079420 | None:intergenic | 45.0% | |
CGTTGGACAAAGAACGCAAA+AGG | - | chr8.2:58080108-58080127 | MS.gene016414:intron | 45.0% | |
CTTGTGCTAGCATTGCCATT+AGG | + | chr8.2:58080737-58080756 | None:intergenic | 45.0% | |
GATGTTAGGCGCAATAGTAG+TGG | - | chr8.2:58078548-58078567 | MS.gene016414:intron | 45.0% | |
GCACAAGTCATGAATGTTGC+TGG | - | chr8.2:58080950-58080969 | MS.gene016414:CDS | 45.0% | |
GGAACACCACAAAGACTGTT+TGG | - | chr8.2:58078235-58078254 | MS.gene016414:CDS | 45.0% | |
GGGATATATGGTTGCTCAGA+AGG | - | chr8.2:58078877-58078896 | MS.gene016414:CDS | 45.0% | |
GTAGACTATTCGAGTCACGT+GGG | - | chr8.2:58080010-58080029 | MS.gene016414:intron | 45.0% | |
TATATGGTTGCTCAGAAGGG+TGG | - | chr8.2:58078881-58078900 | MS.gene016414:CDS | 45.0% | |
TCTGAACAGCGATTCCAATG+GGG | - | chr8.2:58080137-58080156 | MS.gene016414:intron | 45.0% | |
TGTAGACTATTCGAGTCACG+TGG | - | chr8.2:58080009-58080028 | MS.gene016414:intron | 45.0% | |
! | CCATCTGTTACCACTGCTTT+TGG | + | chr8.2:58079316-58079335 | None:intergenic | 45.0% |
! | CCTTGCTTCGCAATTTGTTC+GGG | + | chr8.2:58078672-58078691 | None:intergenic | 45.0% |
! | CGGAGCAATTTGAGGAGTTT+TGG | - | chr8.2:58079488-58079507 | MS.gene016414:CDS | 45.0% |
! | GCCTTGCTTCGCAATTTGTT+CGG | + | chr8.2:58078673-58078692 | None:intergenic | 45.0% |
!! | ATTTGGTGTTGCGTTGTTGG+AGG | - | chr8.2:58079225-58079244 | MS.gene016414:CDS | 45.0% |
!! | TCATACCGCAAGGCATTGTT+TGG | - | chr8.2:58080437-58080456 | MS.gene016414:CDS | 45.0% |
AACTTCCTGTGTTGGGCTCT+TGG | - | chr8.2:58080928-58080947 | MS.gene016414:CDS | 50.0% | |
ACTGGCAAATCAGCTGTCTC+CGG | + | chr8.2:58080803-58080822 | None:intergenic | 50.0% | |
CATCTCATCGCTTATGTGCC+TGG | - | chr8.2:58079380-58079399 | MS.gene016414:CDS | 50.0% | |
CCAGGTTGCAACACATTCAC+AGG | + | chr8.2:58080845-58080864 | None:intergenic | 50.0% | |
CCCGAACAAATTGCGAAGCA+AGG | - | chr8.2:58078669-58078688 | MS.gene016414:CDS | 50.0% | |
CCTGTGAATGTGTTGCAACC+TGG | - | chr8.2:58080842-58080861 | MS.gene016414:CDS | 50.0% | |
CCTTTGCTCTTCACAGTGAC+CGG | + | chr8.2:58080351-58080370 | None:intergenic | 50.0% | |
CGGAGTCCAAACAGTCTTTG+TGG | + | chr8.2:58078244-58078263 | None:intergenic | 50.0% | |
GCAGTGGTAACAGATGGAGA+TGG | - | chr8.2:58079319-58079338 | MS.gene016414:CDS | 50.0% | |
GCGATGCATTAGCAAGTGAC+AGG | - | chr8.2:58078402-58078421 | MS.gene016414:CDS | 50.0% | |
GGTTGCAACACATTCACAGG+AGG | + | chr8.2:58080842-58080861 | None:intergenic | 50.0% | |
TTTGGGCTGATGGGAGTAGT+AGG | - | chr8.2:58079086-58079105 | MS.gene016414:CDS | 50.0% | |
CCGGTCACTGTGAAGAGCAA+AGG | - | chr8.2:58080348-58080367 | MS.gene016414:CDS | 55.0% | |
TCAGCTGTCTCCGGAATCTC+TGG | + | chr8.2:58080794-58080813 | None:intergenic | 55.0% | |
TGCTGGTGCAATACGTCTCG+AGG | - | chr8.2:58079876-58079895 | MS.gene016414:intron | 55.0% | |
TTGTGCCAAGAGCCCAACAC+AGG | + | chr8.2:58080936-58080955 | None:intergenic | 55.0% | |
! | CGCAGGTGAGTTGACAACAC+AGG | + | chr8.2:58079784-58079803 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 58078233 | 58081027 | 58078233 | ID=MS.gene016414 |
chr8.2 | mRNA | 58078233 | 58081027 | 58078233 | ID=MS.gene016414.t1;Parent=MS.gene016414 |
chr8.2 | exon | 58080206 | 58081027 | 58080206 | ID=MS.gene016414.t1.exon1;Parent=MS.gene016414.t1 |
chr8.2 | CDS | 58080206 | 58081027 | 58080206 | ID=cds.MS.gene016414.t1;Parent=MS.gene016414.t1 |
chr8.2 | exon | 58078802 | 58079806 | 58078802 | ID=MS.gene016414.t1.exon2;Parent=MS.gene016414.t1 |
chr8.2 | CDS | 58078802 | 58079806 | 58078802 | ID=cds.MS.gene016414.t1;Parent=MS.gene016414.t1 |
chr8.2 | exon | 58078622 | 58078702 | 58078622 | ID=MS.gene016414.t1.exon3;Parent=MS.gene016414.t1 |
chr8.2 | CDS | 58078622 | 58078702 | 58078622 | ID=cds.MS.gene016414.t1;Parent=MS.gene016414.t1 |
chr8.2 | exon | 58078233 | 58078541 | 58078233 | ID=MS.gene016414.t1.exon4;Parent=MS.gene016414.t1 |
chr8.2 | CDS | 58078233 | 58078541 | 58078233 | ID=cds.MS.gene016414.t1;Parent=MS.gene016414.t1 |
Gene Sequence |
Protein sequence |