Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016562.t1 | XP_024632961.1 | 88.1 | 673 | 72 | 1 | 1 | 665 | 81 | 753 | 0.00E+00 | 1209.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016562.t1 | Q9SZL8 | 26.4 | 598 | 374 | 10 | 6 | 601 | 104 | 637 | 6.2e-59 | 230.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016562.t1 | D3YBB9 | 80.3 | 671 | 115 | 3 | 2 | 665 | 114 | 774 | 0.0e+00 | 1094.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene016562.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016562.t1 | MTR_0558s0020 | 88.312 | 231 | 27 | 0 | 1 | 231 | 66 | 296 | 3.99e-152 | 442 |
| MS.gene016562.t1 | MTR_6g090505 | 83.122 | 237 | 40 | 0 | 1 | 237 | 1 | 237 | 1.42e-141 | 417 |
| MS.gene016562.t1 | MTR_6g090505 | 66.667 | 102 | 7 | 2 | 332 | 431 | 230 | 306 | 1.89e-32 | 129 |
| MS.gene016562.t1 | MTR_6g090505 | 79.592 | 49 | 10 | 0 | 503 | 551 | 314 | 362 | 2.19e-12 | 69.7 |
| MS.gene016562.t1 | MTR_1g083640 | 90.196 | 204 | 20 | 0 | 1 | 204 | 81 | 284 | 6.21e-136 | 400 |
| MS.gene016562.t1 | MTR_8g446020 | 79.386 | 228 | 47 | 0 | 4 | 231 | 29 | 256 | 4.77e-130 | 384 |
| MS.gene016562.t1 | MTR_2g014100 | 87.209 | 172 | 22 | 0 | 1 | 172 | 74 | 245 | 5.88e-107 | 324 |
| MS.gene016562.t1 | MTR_0337s0040 | 78.125 | 192 | 42 | 0 | 4 | 195 | 30 | 221 | 4.28e-105 | 318 |
| MS.gene016562.t1 | MTR_0337s0060 | 57.244 | 283 | 24 | 3 | 383 | 665 | 21 | 206 | 2.37e-95 | 294 |
| MS.gene016562.t1 | MTR_1g055240 | 88.028 | 142 | 17 | 0 | 27 | 168 | 3 | 144 | 1.52e-86 | 268 |
| MS.gene016562.t1 | MTR_0019s0290 | 82.237 | 152 | 27 | 0 | 18 | 169 | 9 | 160 | 1.07e-85 | 266 |
| MS.gene016562.t1 | MTR_3g008240 | 86.232 | 138 | 19 | 0 | 1 | 138 | 66 | 203 | 2.83e-80 | 253 |
| MS.gene016562.t1 | MTR_4g040430 | 84.783 | 138 | 17 | 1 | 1 | 138 | 65 | 198 | 5.47e-78 | 247 |
| MS.gene016562.t1 | MTR_3g028680 | 83.036 | 112 | 19 | 0 | 554 | 665 | 1 | 112 | 5.37e-58 | 194 |
| MS.gene016562.t1 | MTR_4g133495 | 73.810 | 126 | 30 | 1 | 512 | 634 | 88 | 213 | 1.84e-57 | 196 |
| MS.gene016562.t1 | MTR_4g133340 | 73.810 | 126 | 30 | 1 | 512 | 634 | 88 | 213 | 1.84e-57 | 196 |
| MS.gene016562.t1 | MTR_5g071590 | 80.583 | 103 | 20 | 0 | 1 | 103 | 78 | 180 | 3.51e-56 | 189 |
| MS.gene016562.t1 | MTR_2g067090 | 79.817 | 109 | 22 | 0 | 557 | 665 | 99 | 207 | 3.49e-52 | 182 |
| MS.gene016562.t1 | MTR_6g051425 | 32.601 | 273 | 156 | 5 | 21 | 277 | 64 | 324 | 8.26e-36 | 138 |
| MS.gene016562.t1 | MTR_1281s0010 | 80.952 | 63 | 12 | 0 | 1 | 63 | 47 | 109 | 2.65e-29 | 112 |
| MS.gene016562.t1 | MTR_1g070355 | 25.000 | 280 | 194 | 4 | 21 | 298 | 119 | 384 | 3.03e-15 | 79.7 |
| MS.gene016562.t1 | MTR_0337s0050 | 72.222 | 36 | 10 | 0 | 195 | 230 | 14 | 49 | 6.71e-13 | 64.7 |
| MS.gene016562.t1 | MTR_0402s0040 | 26.000 | 150 | 96 | 3 | 20 | 169 | 71 | 205 | 1.12e-12 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016562.t1 | AT4G38180 | 27.568 | 584 | 357 | 11 | 20 | 601 | 118 | 637 | 1.87e-68 | 239 |
| MS.gene016562.t1 | AT4G15090 | 25.667 | 600 | 383 | 11 | 59 | 654 | 121 | 661 | 6.22e-59 | 213 |
| MS.gene016562.t1 | AT4G15090 | 25.667 | 600 | 383 | 11 | 59 | 654 | 121 | 661 | 6.22e-59 | 213 |
| MS.gene016562.t1 | AT4G15090 | 25.667 | 600 | 383 | 11 | 59 | 654 | 121 | 661 | 6.22e-59 | 213 |
| MS.gene016562.t1 | AT4G15090 | 25.667 | 600 | 383 | 11 | 59 | 654 | 121 | 661 | 6.22e-59 | 213 |
| MS.gene016562.t1 | AT4G15090 | 25.667 | 600 | 383 | 11 | 59 | 654 | 121 | 661 | 6.22e-59 | 213 |
| MS.gene016562.t1 | AT2G27110 | 25.963 | 597 | 368 | 15 | 63 | 655 | 108 | 634 | 1.02e-53 | 198 |
| MS.gene016562.t1 | AT2G27110 | 25.963 | 597 | 368 | 15 | 63 | 655 | 108 | 634 | 1.02e-53 | 198 |
| MS.gene016562.t1 | AT2G27110 | 27.112 | 509 | 314 | 11 | 149 | 655 | 36 | 489 | 1.99e-53 | 196 |
| MS.gene016562.t1 | AT3G06250 | 26.609 | 466 | 282 | 10 | 135 | 597 | 295 | 703 | 5.67e-50 | 186 |
| MS.gene016562.t1 | AT3G06250 | 26.609 | 466 | 282 | 10 | 135 | 597 | 295 | 703 | 5.67e-50 | 186 |
| MS.gene016562.t1 | AT3G06250 | 26.609 | 466 | 282 | 10 | 135 | 597 | 295 | 703 | 5.67e-50 | 186 |
| MS.gene016562.t1 | AT1G76320 | 25.085 | 586 | 351 | 14 | 19 | 598 | 41 | 544 | 2.98e-48 | 180 |
| MS.gene016562.t1 | AT1G76320 | 25.085 | 586 | 351 | 14 | 19 | 598 | 41 | 544 | 4.25e-48 | 181 |
| MS.gene016562.t1 | AT1G76320 | 25.085 | 586 | 351 | 14 | 19 | 598 | 41 | 544 | 4.72e-48 | 181 |
| MS.gene016562.t1 | AT1G76320 | 25.085 | 586 | 351 | 14 | 19 | 598 | 41 | 544 | 4.72e-48 | 181 |
| MS.gene016562.t1 | AT3G22170 | 22.405 | 607 | 370 | 13 | 5 | 598 | 100 | 618 | 6.63e-45 | 172 |
| MS.gene016562.t1 | AT3G22170 | 22.405 | 607 | 370 | 13 | 5 | 598 | 100 | 618 | 6.63e-45 | 172 |
| MS.gene016562.t1 | AT4G38170 | 25.290 | 431 | 264 | 11 | 171 | 598 | 24 | 399 | 7.50e-45 | 169 |
| MS.gene016562.t1 | AT5G18960 | 23.671 | 583 | 329 | 15 | 20 | 597 | 256 | 727 | 1.87e-43 | 167 |
| MS.gene016562.t1 | AT5G18960 | 23.671 | 583 | 329 | 15 | 20 | 597 | 256 | 727 | 1.87e-43 | 167 |
| MS.gene016562.t1 | AT1G10240 | 24.912 | 570 | 344 | 17 | 43 | 595 | 102 | 604 | 1.33e-40 | 158 |
| MS.gene016562.t1 | AT1G10240 | 24.912 | 570 | 344 | 17 | 43 | 595 | 102 | 604 | 1.33e-40 | 158 |
| MS.gene016562.t1 | AT5G28530 | 23.770 | 610 | 373 | 16 | 5 | 596 | 84 | 619 | 3.82e-38 | 151 |
| MS.gene016562.t1 | AT2G32250 | 24.207 | 599 | 330 | 16 | 5 | 595 | 68 | 550 | 4.50e-37 | 148 |
| MS.gene016562.t1 | AT2G32250 | 24.012 | 658 | 372 | 17 | 5 | 654 | 27 | 564 | 5.54e-37 | 148 |
| MS.gene016562.t1 | AT2G32250 | 24.053 | 607 | 337 | 15 | 5 | 603 | 68 | 558 | 6.87e-37 | 148 |
| MS.gene016562.t1 | AT2G32250 | 24.053 | 607 | 337 | 15 | 5 | 603 | 68 | 558 | 6.87e-37 | 148 |
| MS.gene016562.t1 | AT5G28530 | 23.607 | 610 | 370 | 17 | 5 | 596 | 84 | 615 | 6.88e-37 | 147 |
| MS.gene016562.t1 | AT5G28530 | 23.607 | 610 | 370 | 17 | 5 | 596 | 84 | 615 | 6.88e-37 | 147 |
| MS.gene016562.t1 | AT2G32250 | 24.053 | 607 | 337 | 15 | 5 | 603 | 68 | 558 | 6.98e-37 | 148 |
| MS.gene016562.t1 | AT2G32250 | 24.053 | 607 | 337 | 15 | 5 | 603 | 68 | 558 | 6.98e-37 | 148 |
| MS.gene016562.t1 | AT2G32250 | 24.053 | 607 | 337 | 15 | 5 | 603 | 68 | 558 | 6.98e-37 | 148 |
| MS.gene016562.t1 | AT2G32250 | 24.012 | 658 | 372 | 17 | 5 | 654 | 27 | 564 | 7.27e-37 | 147 |
| MS.gene016562.t1 | AT1G80010 | 23.203 | 612 | 374 | 19 | 4 | 598 | 129 | 661 | 1.02e-34 | 141 |
| MS.gene016562.t1 | AT1G52520 | 22.720 | 603 | 384 | 18 | 2 | 598 | 112 | 638 | 1.25e-32 | 134 |
| MS.gene016562.t1 | AT4G19990 | 27.985 | 268 | 186 | 3 | 155 | 419 | 106 | 369 | 7.18e-28 | 119 |
| MS.gene016562.t1 | AT4G19990 | 34.586 | 133 | 73 | 3 | 527 | 657 | 438 | 558 | 1.38e-11 | 68.2 |
| MS.gene016562.t1 | AT4G19990 | 27.985 | 268 | 186 | 3 | 155 | 419 | 177 | 440 | 7.92e-28 | 120 |
| MS.gene016562.t1 | AT4G19990 | 34.586 | 133 | 73 | 3 | 527 | 657 | 509 | 629 | 1.45e-11 | 68.2 |
| MS.gene016562.t1 | AT4G19990 | 27.985 | 268 | 186 | 3 | 155 | 419 | 163 | 426 | 8.31e-28 | 119 |
| MS.gene016562.t1 | AT4G19990 | 34.586 | 133 | 73 | 3 | 527 | 657 | 495 | 615 | 1.55e-11 | 68.2 |
| MS.gene016562.t1 | AT4G19990 | 27.985 | 268 | 186 | 3 | 155 | 419 | 163 | 426 | 8.86e-28 | 119 |
| MS.gene016562.t1 | AT4G19990 | 34.586 | 133 | 73 | 3 | 527 | 657 | 495 | 615 | 1.43e-11 | 68.2 |
| MS.gene016562.t1 | AT4G19990 | 27.985 | 268 | 186 | 3 | 155 | 419 | 163 | 426 | 8.86e-28 | 119 |
| MS.gene016562.t1 | AT4G19990 | 34.586 | 133 | 73 | 3 | 527 | 657 | 495 | 615 | 1.43e-11 | 68.2 |
| MS.gene016562.t1 | AT4G19990 | 27.985 | 268 | 186 | 3 | 155 | 419 | 163 | 426 | 9.86e-28 | 119 |
| MS.gene016562.t1 | AT4G19990 | 34.586 | 133 | 73 | 3 | 527 | 657 | 495 | 615 | 1.42e-11 | 68.2 |
| MS.gene016562.t1 | AT4G19990 | 27.985 | 268 | 186 | 3 | 155 | 419 | 163 | 426 | 9.86e-28 | 119 |
| MS.gene016562.t1 | AT4G19990 | 34.586 | 133 | 73 | 3 | 527 | 657 | 495 | 615 | 1.42e-11 | 68.2 |
| MS.gene016562.t1 | AT5G28530 | 21.333 | 600 | 337 | 19 | 5 | 596 | 84 | 556 | 4.71e-19 | 92.0 |
Find 99 sgRNAs with CRISPR-Local
Find 180 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCGATGAGTTAACTAATT+TGG | 0.156761 | 8.1:+64065209 | MS.gene016562:CDS |
| TTAAACAATGTAGGCATTAT+TGG | 0.168293 | 8.1:+64066978 | MS.gene016562:intron |
| CTTTAGTCATTTCAACATTA+TGG | 0.194287 | 8.1:+64065476 | MS.gene016562:CDS |
| TACATTTCAGCTGCCTTTCT+TGG | 0.197151 | 8.1:+64064928 | MS.gene016562:intron |
| CAACAAGATTATGCTCTATT+TGG | 0.198611 | 8.1:+64064414 | MS.gene016562:CDS |
| CATCGTAAGAGTGTGTTATT+TGG | 0.276792 | 8.1:+64064961 | MS.gene016562:CDS |
| TATGGTTTGAGGTTTCTTAT+TGG | 0.280533 | 8.1:-64065055 | None:intergenic |
| GGTTTCAAATGTTGATGTTT+TGG | 0.317051 | 8.1:+64065773 | MS.gene016562:CDS |
| AATCAGATTTCGACTACAAT+TGG | 0.318540 | 8.1:+64065250 | MS.gene016562:CDS |
| TGTTCTTGAGGCAGGGAAAA+AGG | 0.322946 | 8.1:+64066190 | MS.gene016562:CDS |
| ACCAGCCTGGTCTGTGTATA+TGG | 0.341000 | 8.1:-64065073 | None:intergenic |
| GCCGATATTTATTGTTTGTT+CGG | 0.341758 | 8.1:-64064464 | None:intergenic |
| GAGGGATAATCATGCTGATT+TGG | 0.346844 | 8.1:+64065509 | MS.gene016562:CDS |
| GTATGTATTGGTCTTCAGTT+TGG | 0.366593 | 8.1:+64065349 | MS.gene016562:CDS |
| GTCTTTAGTGCCAACATTCA+TGG | 0.367086 | 8.1:-64066066 | None:intergenic |
| TCATGCTGATTTGGACTTCA+AGG | 0.372476 | 8.1:+64065518 | MS.gene016562:CDS |
| CTCAACGGTGTTCTTGAGGC+AGG | 0.386173 | 8.1:+64066182 | MS.gene016562:CDS |
| AACAATAAATATCGGCCATT+AGG | 0.388497 | 8.1:+64064471 | MS.gene016562:CDS |
| ACCGAACAAACAATAAATAT+CGG | 0.389395 | 8.1:+64064463 | MS.gene016562:CDS |
| TGAATGTTTATAAGATATAT+AGG | 0.391990 | 8.1:+64064025 | MS.gene016562:CDS |
| TTCTCATACTCAACAAGAAC+TGG | 0.395633 | 8.1:-64063934 | None:intergenic |
| TTCCTTCAAATACTATTATG+AGG | 0.399583 | 8.1:+64065650 | MS.gene016562:CDS |
| GAGGAGTTTCTTATTTCTAA+AGG | 0.403538 | 8.1:+64066215 | MS.gene016562:CDS |
| TATGTATTGGTCTTCAGTTT+GGG | 0.407479 | 8.1:+64065350 | MS.gene016562:CDS |
| CATGTCGTATGTTTGAGAAC+CGG | 0.411671 | 8.1:+64065898 | MS.gene016562:CDS |
| GATTATGATCTTCAAACCTT+GGG | 0.413114 | 8.1:-64065821 | None:intergenic |
| GGGTTGTCACAGTCGACATT+AGG | 0.419786 | 8.1:+64065856 | MS.gene016562:CDS |
| CGATTATGATCTTCAAACCT+TGG | 0.425681 | 8.1:-64065822 | None:intergenic |
| CGAGAAGTAAATGAAGTTCA+AGG | 0.430014 | 8.1:+64064111 | MS.gene016562:CDS |
| AGCTGGAATATATTTGAAGT+TGG | 0.433136 | 8.1:+64063993 | MS.gene016562:CDS |
| TGGTCTGTGTATATGGTTTG+AGG | 0.447350 | 8.1:-64065066 | None:intergenic |
| GAAAGGGTTGGTTGTAAAGC+TGG | 0.447509 | 8.1:+64063976 | MS.gene016562:CDS |
| CGCTTTAAAACATATTGTGC+AGG | 0.447633 | 8.1:-64065999 | None:intergenic |
| CGTTATGCTTGTAACAAAGA+AGG | 0.449439 | 8.1:+64063859 | MS.gene016562:CDS |
| GCTTTAATAAATTCTAAAGC+TGG | 0.450264 | 8.1:+64064141 | MS.gene016562:CDS |
| CTCATTCAAATCGTATGTAT+TGG | 0.458322 | 8.1:+64065337 | MS.gene016562:CDS |
| CTCAAGTAGCGCAAATGCTC+TGG | 0.460440 | 8.1:-64064081 | None:intergenic |
| ATGTCGTATGTTTGAGAACC+GGG | 0.461344 | 8.1:+64065899 | MS.gene016562:CDS |
| GGCCTACTTCAGACTTTAAG+TGG | 0.462107 | 8.1:+64065304 | MS.gene016562:CDS |
| ACAAAATAAGAAATCGGATA+AGG | 0.469178 | 8.1:+64063825 | MS.gene016562:CDS |
| GAAGTGATGGGTCAAGGAGT+TGG | 0.484292 | 8.1:+64064186 | MS.gene016562:CDS |
| CTCCTCATAATAGTATTTGA+AGG | 0.485089 | 8.1:-64065652 | None:intergenic |
| TTACAACCAACCCTTTCCTC+TGG | 0.485330 | 8.1:-64063970 | None:intergenic |
| TCTAATGACAACTCGTCAAA+AGG | 0.488137 | 8.1:+64064254 | MS.gene016562:CDS |
| CAATTCACAAAATAAGAAAT+CGG | 0.490263 | 8.1:+64063819 | MS.gene016562:CDS |
| TATGAGGAGGACACAACAAA+AGG | 0.490908 | 8.1:+64065666 | MS.gene016562:CDS |
| ATGATTGTCAAAACCAAGAA+AGG | 0.491378 | 8.1:-64064941 | None:intergenic |
| ATCAGATTTCGACTACAATT+GGG | 0.491708 | 8.1:+64065251 | MS.gene016562:CDS |
| CGTCAAAAGGAGATGGTGGC+TGG | 0.492100 | 8.1:+64064267 | MS.gene016562:CDS |
| ACATTATGGTTCAGAGAATG+AGG | 0.494022 | 8.1:+64065490 | MS.gene016562:CDS |
| GAGAACATCTTATGAAGTGA+TGG | 0.499875 | 8.1:+64064173 | MS.gene016562:CDS |
| TGTCTTCTGCAGCATCAACT+TGG | 0.502977 | 8.1:-64064359 | None:intergenic |
| ATCATAATCGACTTGATGAA+AGG | 0.507955 | 8.1:+64065835 | MS.gene016562:CDS |
| TTTAAGTCCGAAAATCGAAA+AGG | 0.508080 | 8.1:-64064225 | None:intergenic |
| ATTGGTCTTCAGTTTGGGTG+AGG | 0.514147 | 8.1:+64065355 | MS.gene016562:CDS |
| GATCTTCAAACCTTGGGGAA+AGG | 0.519004 | 8.1:-64065815 | None:intergenic |
| TAAAGAATCGAACAAGTGAA+TGG | 0.519618 | 8.1:-64065458 | None:intergenic |
| TCATAATCGACTTGATGAAA+GGG | 0.526860 | 8.1:+64065836 | MS.gene016562:CDS |
| CATAATAGTATTTGAAGGAA+AGG | 0.529686 | 8.1:-64065647 | None:intergenic |
| GGACCGCATAAGCTGACTGC+TGG | 0.530780 | 8.1:-64065571 | None:intergenic |
| CTGAAATCTACCATGAATGT+TGG | 0.534154 | 8.1:+64066056 | MS.gene016562:CDS |
| TAACAAAGAAGGTTTCAAGA+AGG | 0.538422 | 8.1:+64063870 | MS.gene016562:CDS |
| AATCGAACAAGTGAATGGTC+TGG | 0.540971 | 8.1:-64065453 | None:intergenic |
| ATGAGGAGGACACAACAAAA+GGG | 0.542065 | 8.1:+64065667 | MS.gene016562:CDS |
| AACAAAGAAGGTTTCAAGAA+GGG | 0.545537 | 8.1:+64063871 | MS.gene016562:CDS |
| TGTTTATAAGATATATAGGT+GGG | 0.546370 | 8.1:+64064029 | MS.gene016562:CDS |
| AAATGCTCTGGTTTATGTAA+TGG | 0.552634 | 8.1:-64064069 | None:intergenic |
| ACTTCAACAACGCACCAGCC+TGG | 0.557139 | 8.1:-64065086 | None:intergenic |
| AATGAAGCTCTCTCGAAACC+AGG | 0.565261 | 8.1:+64064321 | MS.gene016562:CDS |
| GTGATGGGTCAAGGAGTTGG+AGG | 0.568802 | 8.1:+64064189 | MS.gene016562:CDS |
| TACACGTGTTTGCGCAGATG+CGG | 0.571672 | 8.1:+64066142 | MS.gene016562:CDS |
| TTGAAGAAAACCTTTCCCCA+AGG | 0.580876 | 8.1:+64065805 | MS.gene016562:CDS |
| GACCGCATAAGCTGACTGCT+GGG | 0.584869 | 8.1:-64065570 | None:intergenic |
| TGGTGTATACTTGTTTACTA+CGG | 0.585960 | 8.1:-64065592 | None:intergenic |
| TCTTATGAAGTGATGGGTCA+AGG | 0.589029 | 8.1:+64064180 | MS.gene016562:CDS |
| TCAACGGTGTTCTTGAGGCA+GGG | 0.590097 | 8.1:+64066183 | MS.gene016562:CDS |
| ACCATATACACAGACCAGGC+TGG | 0.590176 | 8.1:+64065072 | MS.gene016562:CDS |
| TTGATTTCGTTGTGCTTGAG+TGG | 0.590178 | 8.1:-64066090 | None:intergenic |
| ATTTCTCAACGGTGTTCTTG+AGG | 0.591378 | 8.1:+64066178 | MS.gene016562:CDS |
| GACAACTCGTCAAAAGGAGA+TGG | 0.599038 | 8.1:+64064260 | MS.gene016562:CDS |
| AGAACATCTTATGAAGTGAT+GGG | 0.601988 | 8.1:+64064174 | MS.gene016562:CDS |
| AACTCGTCAAAAGGAGATGG+TGG | 0.603142 | 8.1:+64064263 | MS.gene016562:CDS |
| ACGTGTTTGCGCAGATGCGG+AGG | 0.605934 | 8.1:+64066145 | MS.gene016562:CDS |
| ATCCCAGCAGTCAGCTTATG+CGG | 0.606153 | 8.1:+64065568 | MS.gene016562:CDS |
| CTTCAAATACTATTATGAGG+AGG | 0.607664 | 8.1:+64065653 | MS.gene016562:CDS |
| AGCCACTTAAAGTCTGAAGT+AGG | 0.617789 | 8.1:-64065306 | None:intergenic |
| AGAACTGGACTGTCACATGT+TGG | 0.620791 | 8.1:-64063919 | None:intergenic |
| GGGTCAAGGAGTTGGAGGCA+CGG | 0.621882 | 8.1:+64064194 | MS.gene016562:CDS |
| ATGTTTATAAGATATATAGG+TGG | 0.626613 | 8.1:+64064028 | MS.gene016562:CDS |
| ATTATGATCTTCAAACCTTG+GGG | 0.630358 | 8.1:-64065820 | None:intergenic |
| CATTATGGTTCAGAGAATGA+GGG | 0.643278 | 8.1:+64065491 | MS.gene016562:CDS |
| GATTTCAGCTTATCGACAGA+CGG | 0.644926 | 8.1:-64066041 | None:intergenic |
| TGAATAAATGAAAAGCAAGA+TGG | 0.655697 | 8.1:-64065612 | None:intergenic |
| GCATCTGAAATATTTCTCAA+CGG | 0.661104 | 8.1:+64066167 | MS.gene016562:CDS |
| CATGTCGACATAAGAAACCC+CGG | 0.663279 | 8.1:-64065917 | None:intergenic |
| TCAAACCATATACACAGACC+AGG | 0.671057 | 8.1:+64065068 | MS.gene016562:CDS |
| TGTCGTATGTTTGAGAACCG+GGG | 0.673760 | 8.1:+64065900 | MS.gene016562:CDS |
| ATGTTGATAATGATAATGAG+AGG | 0.683310 | 8.1:+64065751 | MS.gene016562:CDS |
| TGTTGATAATGATAATGAGA+GGG | 0.689129 | 8.1:+64065752 | MS.gene016562:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACGTATTTATTATTATATTT+TGG | + | chr8.1:64066640-64066659 | MS.gene016562:intron | 10.0% |
| !! | TGAATGTTTATAAGATATAT+AGG | + | chr8.1:64064025-64064044 | MS.gene016562:CDS | 15.0% |
| !!! | ATGATGAAAAACTATTTTAA+TGG | + | chr8.1:64065279-64065298 | MS.gene016562:CDS | 15.0% |
| !!! | TTGTTTTTATGTTATAAGTT+AGG | + | chr8.1:64066469-64066488 | MS.gene016562:intron | 15.0% |
| !! | AAACCAAATTAACAATCTAA+TGG | - | chr8.1:64066673-64066692 | None:intergenic | 20.0% |
| !! | AAACCATAATTATGGTTTAA+TGG | - | chr8.1:64066716-64066735 | None:intergenic | 20.0% |
| !! | AAACCATTAAACCATAATTA+TGG | + | chr8.1:64066710-64066729 | MS.gene016562:intron | 20.0% |
| !! | AAACCATTAGATTGTTAATT+TGG | + | chr8.1:64066667-64066686 | MS.gene016562:intron | 20.0% |
| !! | AATTCTTGATTGTTATGTAT+TGG | + | chr8.1:64066567-64066586 | MS.gene016562:intron | 20.0% |
| !! | ATGTTTATAAGATATATAGG+TGG | + | chr8.1:64064028-64064047 | MS.gene016562:CDS | 20.0% |
| !! | ATTAAAGTCATAATCAAACA+AGG | + | chr8.1:64066950-64066969 | MS.gene016562:intron | 20.0% |
| !! | CAATTCACAAAATAAGAAAT+CGG | + | chr8.1:64063819-64063838 | MS.gene016562:CDS | 20.0% |
| !! | TCTTAACTAAACCATAATTA+TGG | - | chr8.1:64066724-64066743 | None:intergenic | 20.0% |
| !! | TGTTTATAAGATATATAGGT+GGG | + | chr8.1:64064029-64064048 | MS.gene016562:CDS | 20.0% |
| !!! | AATTTAATGTTCTGGTTTAT+TGG | + | chr8.1:64064646-64064665 | MS.gene016562:intron | 20.0% |
| !!! | TGAAAAACTATTTTAATGGA+AGG | + | chr8.1:64065283-64065302 | MS.gene016562:CDS | 20.0% |
| !!! | TGAATGTTTATATTGATTGA+AGG | + | chr8.1:64064618-64064637 | MS.gene016562:intron | 20.0% |
| ! | AAAGTGATTATGAAAAAGCT+AGG | + | chr8.1:64066369-64066388 | MS.gene016562:intron | 25.0% |
| ! | AAGTGATTATGAAAAAGCTA+GGG | + | chr8.1:64066370-64066389 | MS.gene016562:intron | 25.0% |
| ! | ACAAAATAAGAAATCGGATA+AGG | + | chr8.1:64063825-64063844 | MS.gene016562:CDS | 25.0% |
| ! | ACCGAACAAACAATAAATAT+CGG | + | chr8.1:64064463-64064482 | MS.gene016562:CDS | 25.0% |
| ! | AGTACAAAATACTAACCTAA+TGG | - | chr8.1:64064489-64064508 | None:intergenic | 25.0% |
| ! | CATAATAGTATTTGAAGGAA+AGG | - | chr8.1:64065650-64065669 | None:intergenic | 25.0% |
| ! | CTTTAGTCATTTCAACATTA+TGG | + | chr8.1:64065476-64065495 | MS.gene016562:CDS | 25.0% |
| ! | TGAAATTTGAATGAATGTTC+TGG | + | chr8.1:64064536-64064555 | MS.gene016562:intron | 25.0% |
| ! | TGAATAAATGAAAAGCAAGA+TGG | - | chr8.1:64065615-64065634 | None:intergenic | 25.0% |
| ! | TTAAACAATGTAGGCATTAT+TGG | + | chr8.1:64066978-64066997 | MS.gene016562:intron | 25.0% |
| ! | TTCCTTCAAATACTATTATG+AGG | + | chr8.1:64065650-64065669 | MS.gene016562:CDS | 25.0% |
| ! | TTTCGATGAGTTAACTAATT+TGG | + | chr8.1:64065209-64065228 | MS.gene016562:CDS | 25.0% |
| !! | AGGTTTAGAATTTAATGTTC+TGG | + | chr8.1:64064638-64064657 | MS.gene016562:intron | 25.0% |
| !! | ATTTTCAATTCTGAGTTAAG+TGG | + | chr8.1:64066743-64066762 | MS.gene016562:intron | 25.0% |
| !! | CTATACATTTTCACATTTGT+TGG | + | chr8.1:64066612-64066631 | MS.gene016562:intron | 25.0% |
| !! | TCAATTTCGAATGTTTTTCA+AGG | + | chr8.1:64065108-64065127 | MS.gene016562:CDS | 25.0% |
| !! | TGTTGTATTTTGTTCTGATT+TGG | + | chr8.1:64064899-64064918 | MS.gene016562:intron | 25.0% |
| !! | TTGGTTTGAATATTATCTTC+TGG | + | chr8.1:64066586-64066605 | MS.gene016562:intron | 25.0% |
| !!! | AAGACATAGCTAGTATTTTT+TGG | + | chr8.1:64064376-64064395 | MS.gene016562:CDS | 25.0% |
| !!! | AAGGCATTTTTAAACAATGT+AGG | + | chr8.1:64066969-64066988 | MS.gene016562:intron | 25.0% |
| !!! | AGACATAGCTAGTATTTTTT+GGG | + | chr8.1:64064377-64064396 | MS.gene016562:CDS | 25.0% |
| !!! | ATGTTCTGGTTTAGAATTAA+AGG | + | chr8.1:64064550-64064569 | MS.gene016562:intron | 25.0% |
| !!! | ATGTTGATAATGATAATGAG+AGG | + | chr8.1:64065751-64065770 | MS.gene016562:CDS | 25.0% |
| !!! | CTTATTTTGTGAATTGTTCT+TGG | - | chr8.1:64063815-64063834 | None:intergenic | 25.0% |
| !!! | GCTTTAATAAATTCTAAAGC+TGG | + | chr8.1:64064141-64064160 | MS.gene016562:CDS | 25.0% |
| !!! | TGTTGATAATGATAATGAGA+GGG | + | chr8.1:64065752-64065771 | MS.gene016562:CDS | 25.0% |
| AAACACATATGATCTTTCCA+TGG | - | chr8.1:64064709-64064728 | None:intergenic | 30.0% | |
| AACAAAGAAGGTTTCAAGAA+GGG | + | chr8.1:64063871-64063890 | MS.gene016562:CDS | 30.0% | |
| AACAATAAATATCGGCCATT+AGG | + | chr8.1:64064471-64064490 | MS.gene016562:CDS | 30.0% | |
| AAGAAAGACCAAATCCAATT+AGG | + | chr8.1:64066330-64066349 | MS.gene016562:intron | 30.0% | |
| AATCAGATTTCGACTACAAT+TGG | + | chr8.1:64065250-64065269 | MS.gene016562:CDS | 30.0% | |
| AGAACATCTTATGAAGTGAT+GGG | + | chr8.1:64064174-64064193 | MS.gene016562:CDS | 30.0% | |
| ATAAGTTAGGAAAGATGATG+AGG | + | chr8.1:64066482-64066501 | MS.gene016562:intron | 30.0% | |
| ATCAGATTTCGACTACAATT+GGG | + | chr8.1:64065251-64065270 | MS.gene016562:CDS | 30.0% | |
| ATGATTGTCAAAACCAAGAA+AGG | - | chr8.1:64064944-64064963 | None:intergenic | 30.0% | |
| ATTATGATCTTCAAACCTTG+GGG | - | chr8.1:64065823-64065842 | None:intergenic | 30.0% | |
| CAACAAGATTATGCTCTATT+TGG | + | chr8.1:64064414-64064433 | MS.gene016562:CDS | 30.0% | |
| CTCATTCAAATCGTATGTAT+TGG | + | chr8.1:64065337-64065356 | MS.gene016562:CDS | 30.0% | |
| CTCCTCATAATAGTATTTGA+AGG | - | chr8.1:64065655-64065674 | None:intergenic | 30.0% | |
| CTGGTATATGTGTGTTAATT+TGG | + | chr8.1:64064575-64064594 | MS.gene016562:intron | 30.0% | |
| CTTCAAATACTATTATGAGG+AGG | + | chr8.1:64065653-64065672 | MS.gene016562:CDS | 30.0% | |
| GAGAATGCAAAGAAAAATCT+CGG | + | chr8.1:64065165-64065184 | MS.gene016562:CDS | 30.0% | |
| GATTATGATCTTCAAACCTT+GGG | - | chr8.1:64065824-64065843 | None:intergenic | 30.0% | |
| GCCGATATTTATTGTTTGTT+CGG | - | chr8.1:64064467-64064486 | None:intergenic | 30.0% | |
| TAAAGAAAAACCAGAGGAAA+GGG | + | chr8.1:64063960-64063979 | MS.gene016562:CDS | 30.0% | |
| TAAAGAATCGAACAAGTGAA+TGG | - | chr8.1:64065461-64065480 | None:intergenic | 30.0% | |
| TAACAAAGAAGGTTTCAAGA+AGG | + | chr8.1:64063870-64063889 | MS.gene016562:CDS | 30.0% | |
| TGGATATCATAGTAAAAACC+TGG | - | chr8.1:64064342-64064361 | None:intergenic | 30.0% | |
| TGGTGTATACTTGTTTACTA+CGG | - | chr8.1:64065595-64065614 | None:intergenic | 30.0% | |
| TTCTTTGACCTAATTGGATT+TGG | - | chr8.1:64066341-64066360 | None:intergenic | 30.0% | |
| TTTAAGTCCGAAAATCGAAA+AGG | - | chr8.1:64064228-64064247 | None:intergenic | 30.0% | |
| TTTCTATTTACACAGCACAA+TGG | + | chr8.1:64064858-64064877 | MS.gene016562:intron | 30.0% | |
| ! | AAATGCTCTGGTTTATGTAA+TGG | - | chr8.1:64064072-64064091 | None:intergenic | 30.0% |
| ! | AGCTGGAATATATTTGAAGT+TGG | + | chr8.1:64063993-64064012 | MS.gene016562:CDS | 30.0% |
| ! | CAAAGTTTTCACAATTGAGA+AGG | + | chr8.1:64065710-64065729 | MS.gene016562:CDS | 30.0% |
| ! | GAATCTTCCTTTTCGATTTT+CGG | + | chr8.1:64064218-64064237 | MS.gene016562:CDS | 30.0% |
| ! | GCATCTGAAATATTTCTCAA+CGG | + | chr8.1:64066167-64066186 | MS.gene016562:CDS | 30.0% |
| ! | GGTTTCAAATGTTGATGTTT+TGG | + | chr8.1:64065773-64065792 | MS.gene016562:CDS | 30.0% |
| ! | TATGGTTTGAGGTTTCTTAT+TGG | - | chr8.1:64065058-64065077 | None:intergenic | 30.0% |
| ! | TGAGGCTTTAACAATTTAAG+CGG | + | chr8.1:64066439-64066458 | MS.gene016562:intron | 30.0% |
| ! | TGAGGCTTTAACTAAAAAAG+CGG | + | chr8.1:64066500-64066519 | MS.gene016562:intron | 30.0% |
| ! | TGGTTTAGAATTAAAGGTTC+TGG | + | chr8.1:64064556-64064575 | MS.gene016562:intron | 30.0% |
| ! | TTTGGTCTTTCTTTGAACTT+TGG | - | chr8.1:64066323-64066342 | None:intergenic | 30.0% |
| !! | ACATGTTTTCAAGATTTTGG+AGG | + | chr8.1:64065935-64065954 | MS.gene016562:CDS | 30.0% |
| !! | ATCATAATCGACTTGATGAA+AGG | + | chr8.1:64065835-64065854 | MS.gene016562:CDS | 30.0% |
| !! | GAGGAGTTTCTTATTTCTAA+AGG | + | chr8.1:64066215-64066234 | MS.gene016562:CDS | 30.0% |
| !! | TATGTATTGGTCTTCAGTTT+GGG | + | chr8.1:64065350-64065369 | MS.gene016562:CDS | 30.0% |
| !! | TCATAATCGACTTGATGAAA+GGG | + | chr8.1:64065836-64065855 | MS.gene016562:CDS | 30.0% |
| !! | TCGACATGTTTTCAAGATTT+TGG | + | chr8.1:64065932-64065951 | MS.gene016562:CDS | 30.0% |
| !!! | CTGCACAATATGTTTTAAAG+CGG | + | chr8.1:64066000-64066019 | MS.gene016562:CDS | 30.0% |
| !!! | GTTTTTCAAGGTGTTTTTCA+TGG | + | chr8.1:64065120-64065139 | MS.gene016562:CDS | 30.0% |
| ACATTATGGTTCAGAGAATG+AGG | + | chr8.1:64065490-64065509 | MS.gene016562:CDS | 35.0% | |
| CATTATGGTTCAGAGAATGA+GGG | + | chr8.1:64065491-64065510 | MS.gene016562:CDS | 35.0% | |
| CCACATCATGAATGAATTCA+AGG | - | chr8.1:64066896-64066915 | None:intergenic | 35.0% | |
| CCTTGAATTCATTCATGATG+TGG | + | chr8.1:64066893-64066912 | MS.gene016562:intron | 35.0% | |
| CGAGAAGTAAATGAAGTTCA+AGG | + | chr8.1:64064111-64064130 | MS.gene016562:CDS | 35.0% | |
| CGATTATGATCTTCAAACCT+TGG | - | chr8.1:64065825-64065844 | None:intergenic | 35.0% | |
| CGTTATGCTTGTAACAAAGA+AGG | + | chr8.1:64063859-64063878 | MS.gene016562:CDS | 35.0% | |
| CTAAAGAAAAACCAGAGGAA+AGG | + | chr8.1:64063959-64063978 | MS.gene016562:CDS | 35.0% | |
| CTGAAATCTACCATGAATGT+TGG | + | chr8.1:64066056-64066075 | MS.gene016562:CDS | 35.0% | |
| GAAAGCTAAAGAAAAACCAG+AGG | + | chr8.1:64063954-64063973 | MS.gene016562:CDS | 35.0% | |
| GAAGCAAAAGAAAGATGATG+AGG | + | chr8.1:64066421-64066440 | MS.gene016562:intron | 35.0% | |
| GAATGAATTCAAGGAATGAG+TGG | - | chr8.1:64066887-64066906 | None:intergenic | 35.0% | |
| GACAGAAATTCCTTATAGCT+CGG | + | chr8.1:64066396-64066415 | MS.gene016562:intron | 35.0% | |
| GAGAACATCTTATGAAGTGA+TGG | + | chr8.1:64064173-64064192 | MS.gene016562:CDS | 35.0% | |
| GTCTGCTTAATCCTAAAAAC+AGG | + | chr8.1:64063896-64063915 | MS.gene016562:CDS | 35.0% | |
| TCTAATGACAACTCGTCAAA+AGG | + | chr8.1:64064254-64064273 | MS.gene016562:CDS | 35.0% | |
| TGTACAGAGCACAAATTCTA+AGG | - | chr8.1:64064685-64064704 | None:intergenic | 35.0% | |
| TTCTCATACTCAACAAGAAC+TGG | - | chr8.1:64063937-64063956 | None:intergenic | 35.0% | |
| ! | CATCGTAAGAGTGTGTTATT+TGG | + | chr8.1:64064961-64064980 | MS.gene016562:CDS | 35.0% |
| ! | GAGGCTTTAACAATTTAAGC+GGG | + | chr8.1:64066440-64066459 | MS.gene016562:intron | 35.0% |
| ! | TCTTTCAATGCTTTTCTTCG+TGG | + | chr8.1:64065420-64065439 | MS.gene016562:CDS | 35.0% |
| ! | TTTTTCATGGTCTTTGCTCA+TGG | + | chr8.1:64065133-64065152 | MS.gene016562:CDS | 35.0% |
| !! | ACTGCTTTTGAAGACTTAGA+AGG | - | chr8.1:64066269-64066288 | None:intergenic | 35.0% |
| !! | CACAAATTCTAAGGCAAGAT+AGG | - | chr8.1:64064676-64064695 | None:intergenic | 35.0% |
| !! | CGCTTTAAAACATATTGTGC+AGG | - | chr8.1:64066002-64066021 | None:intergenic | 35.0% |
| !! | GTATGTATTGGTCTTCAGTT+TGG | + | chr8.1:64065349-64065368 | MS.gene016562:CDS | 35.0% |
| !! | TTCAAGATTTTGGAGGTCTT+AGG | + | chr8.1:64065942-64065961 | MS.gene016562:CDS | 35.0% |
| !!! | AGACATCAGCTACTTTTGAT+TGG | + | chr8.1:64065004-64065023 | MS.gene016562:CDS | 35.0% |
| !!! | CACAATATGTTTTAAAGCGG+TGG | + | chr8.1:64066003-64066022 | MS.gene016562:CDS | 35.0% |
| AATCGAACAAGTGAATGGTC+TGG | - | chr8.1:64065456-64065475 | None:intergenic | 40.0% | |
| ACCTATGATCTTTGCATAGC+TGG | - | chr8.1:64064807-64064826 | None:intergenic | 40.0% | |
| AGTCGCTTCTTTGACCTAAT+TGG | - | chr8.1:64066347-64066366 | None:intergenic | 40.0% | |
| ATGAGGAGGACACAACAAAA+GGG | + | chr8.1:64065667-64065686 | MS.gene016562:CDS | 40.0% | |
| ATGTCGTATGTTTGAGAACC+GGG | + | chr8.1:64065899-64065918 | MS.gene016562:CDS | 40.0% | |
| ATTTCTCAACGGTGTTCTTG+AGG | + | chr8.1:64066178-64066197 | MS.gene016562:CDS | 40.0% | |
| CATGTCGTATGTTTGAGAAC+CGG | + | chr8.1:64065898-64065917 | MS.gene016562:CDS | 40.0% | |
| GATTTCAGCTTATCGACAGA+CGG | - | chr8.1:64066044-64066063 | None:intergenic | 40.0% | |
| GTCAATTCTGATGTAATGCG+CGG | + | chr8.1:64066830-64066849 | MS.gene016562:intron | 40.0% | |
| GTCTTTAGTGCCAACATTCA+TGG | - | chr8.1:64066069-64066088 | None:intergenic | 40.0% | |
| TACATTTCAGCTGCCTTTCT+TGG | + | chr8.1:64064928-64064947 | MS.gene016562:intron | 40.0% | |
| TATGAGGAGGACACAACAAA+AGG | + | chr8.1:64065666-64065685 | MS.gene016562:CDS | 40.0% | |
| TCAAACCATATACACAGACC+AGG | + | chr8.1:64065068-64065087 | MS.gene016562:CDS | 40.0% | |
| TCCAGCTATGCAAAGATCAT+AGG | + | chr8.1:64064803-64064822 | MS.gene016562:intron | 40.0% | |
| TGGTCTGTGTATATGGTTTG+AGG | - | chr8.1:64065069-64065088 | None:intergenic | 40.0% | |
| TTGAAGAAAACCTTTCCCCA+AGG | + | chr8.1:64065805-64065824 | MS.gene016562:CDS | 40.0% | |
| TTGATTTCGTTGTGCTTGAG+TGG | - | chr8.1:64066093-64066112 | None:intergenic | 40.0% | |
| TTTGCTTCTTCCGAGCTATA+AGG | - | chr8.1:64066409-64066428 | None:intergenic | 40.0% | |
| ! | AGCCACTTAAAGTCTGAAGT+AGG | - | chr8.1:64065309-64065328 | None:intergenic | 40.0% |
| ! | GAGGGATAATCATGCTGATT+TGG | + | chr8.1:64065509-64065528 | MS.gene016562:CDS | 40.0% |
| ! | TGAAGACTTAGAAGGCGTAA+CGG | - | chr8.1:64066261-64066280 | None:intergenic | 40.0% |
| !! | AAGATTTTGGAGGTCTTAGG+TGG | + | chr8.1:64065945-64065964 | MS.gene016562:CDS | 40.0% |
| !! | TCACATGTTGGCCTGTTTTT+AGG | - | chr8.1:64063910-64063929 | None:intergenic | 40.0% |
| !! | TCATGCTGATTTGGACTTCA+AGG | + | chr8.1:64065518-64065537 | MS.gene016562:CDS | 40.0% |
| !! | TCTTATGAAGTGATGGGTCA+AGG | + | chr8.1:64064180-64064199 | MS.gene016562:CDS | 40.0% |
| !!! | GCTAGTATTTTTTGGGCAGA+TGG | + | chr8.1:64064384-64064403 | MS.gene016562:CDS | 40.0% |
| AACTCGTCAAAAGGAGATGG+TGG | + | chr8.1:64064263-64064282 | MS.gene016562:CDS | 45.0% | |
| AATGAAGCTCTCTCGAAACC+AGG | + | chr8.1:64064321-64064340 | MS.gene016562:CDS | 45.0% | |
| AGAACTGGACTGTCACATGT+TGG | - | chr8.1:64063922-64063941 | None:intergenic | 45.0% | |
| ATTTGTGCTCTGTACAGCCA+TGG | + | chr8.1:64064689-64064708 | MS.gene016562:intron | 45.0% | |
| CATGTCGACATAAGAAACCC+CGG | - | chr8.1:64065920-64065939 | None:intergenic | 45.0% | |
| CTGTCTGTGAACCATCTGTT+GGG | + | chr8.1:64066291-64066310 | MS.gene016562:intron | 45.0% | |
| GAAAAACCAGAGGAAAGGGT+TGG | + | chr8.1:64063964-64063983 | MS.gene016562:CDS | 45.0% | |
| GACAACTCGTCAAAAGGAGA+TGG | + | chr8.1:64064260-64064279 | MS.gene016562:CDS | 45.0% | |
| GATCTTCAAACCTTGGGGAA+AGG | - | chr8.1:64065818-64065837 | None:intergenic | 45.0% | |
| GGCCTACTTCAGACTTTAAG+TGG | + | chr8.1:64065304-64065323 | MS.gene016562:CDS | 45.0% | |
| TGTCGTATGTTTGAGAACCG+GGG | + | chr8.1:64065900-64065919 | MS.gene016562:CDS | 45.0% | |
| TGTCTTCTGCAGCATCAACT+TGG | - | chr8.1:64064362-64064381 | None:intergenic | 45.0% | |
| TGTTCTTGAGGCAGGGAAAA+AGG | + | chr8.1:64066190-64066209 | MS.gene016562:CDS | 45.0% | |
| TTACAACCAACCCTTTCCTC+TGG | - | chr8.1:64063973-64063992 | None:intergenic | 45.0% | |
| ! | GTGAGGTCACATTTTACAGC+TGG | + | chr8.1:64065372-64065391 | MS.gene016562:CDS | 45.0% |
| !! | ATTGGTCTTCAGTTTGGGTG+AGG | + | chr8.1:64065355-64065374 | MS.gene016562:CDS | 45.0% |
| !! | GAAAGGGTTGGTTGTAAAGC+TGG | + | chr8.1:64063976-64063995 | MS.gene016562:CDS | 45.0% |
| ACCAGCCTGGTCTGTGTATA+TGG | - | chr8.1:64065076-64065095 | None:intergenic | 50.0% | |
| ACCATATACACAGACCAGGC+TGG | + | chr8.1:64065072-64065091 | MS.gene016562:CDS | 50.0% | |
| ATCCCAGCAGTCAGCTTATG+CGG | + | chr8.1:64065568-64065587 | MS.gene016562:CDS | 50.0% | |
| CTCAAGTAGCGCAAATGCTC+TGG | - | chr8.1:64064084-64064103 | None:intergenic | 50.0% | |
| GCTGTCTGTGAACCATCTGT+TGG | + | chr8.1:64066290-64066309 | MS.gene016562:intron | 50.0% | |
| GGGTTGTCACAGTCGACATT+AGG | + | chr8.1:64065856-64065875 | MS.gene016562:CDS | 50.0% | |
| GTGGCATGTTGAGAGCAAAG+AGG | + | chr8.1:64066912-64066931 | MS.gene016562:intron | 50.0% | |
| TACACGTGTTTGCGCAGATG+CGG | + | chr8.1:64066142-64066161 | MS.gene016562:CDS | 50.0% | |
| TCAACGGTGTTCTTGAGGCA+GGG | + | chr8.1:64066183-64066202 | MS.gene016562:CDS | 50.0% | |
| ! | TTTGGTGCAGTCCCAACAGA+TGG | - | chr8.1:64066305-64066324 | None:intergenic | 50.0% |
| !! | GAAGTGATGGGTCAAGGAGT+TGG | + | chr8.1:64064186-64064205 | MS.gene016562:CDS | 50.0% |
| ACTTCAACAACGCACCAGCC+TGG | - | chr8.1:64065089-64065108 | None:intergenic | 55.0% | |
| CTCAACGGTGTTCTTGAGGC+AGG | + | chr8.1:64066182-64066201 | MS.gene016562:CDS | 55.0% | |
| GACCGCATAAGCTGACTGCT+GGG | - | chr8.1:64065573-64065592 | None:intergenic | 55.0% | |
| TGAGGCAGGGAAAAAGGCAG+AGG | + | chr8.1:64066196-64066215 | MS.gene016562:CDS | 55.0% | |
| ! | CGTCAAAAGGAGATGGTGGC+TGG | + | chr8.1:64064267-64064286 | MS.gene016562:CDS | 55.0% |
| !! | GTGATGGGTCAAGGAGTTGG+AGG | + | chr8.1:64064189-64064208 | MS.gene016562:CDS | 55.0% |
| ACGTGTTTGCGCAGATGCGG+AGG | + | chr8.1:64066145-64066164 | MS.gene016562:CDS | 60.0% | |
| GGACCGCATAAGCTGACTGC+TGG | - | chr8.1:64065574-64065593 | None:intergenic | 60.0% | |
| GGGTCAAGGAGTTGGAGGCA+CGG | + | chr8.1:64064194-64064213 | MS.gene016562:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 64063802 | 64067013 | 64063802 | ID=MS.gene016562 |
| chr8.1 | mRNA | 64063802 | 64067013 | 64063802 | ID=MS.gene016562.t1;Parent=MS.gene016562 |
| chr8.1 | exon | 64063802 | 64064492 | 64063802 | ID=MS.gene016562.t1.exon1;Parent=MS.gene016562.t1 |
| chr8.1 | CDS | 64063802 | 64064492 | 64063802 | ID=cds.MS.gene016562.t1;Parent=MS.gene016562.t1 |
| chr8.1 | exon | 64064938 | 64066236 | 64064938 | ID=MS.gene016562.t1.exon2;Parent=MS.gene016562.t1 |
| chr8.1 | CDS | 64064938 | 64066236 | 64064938 | ID=cds.MS.gene016562.t1;Parent=MS.gene016562.t1 |
| chr8.1 | exon | 64066991 | 64067013 | 64066991 | ID=MS.gene016562.t1.exon3;Parent=MS.gene016562.t1 |
| chr8.1 | CDS | 64066991 | 64067013 | 64066991 | ID=cds.MS.gene016562.t1;Parent=MS.gene016562.t1 |
| Gene Sequence |
| Protein sequence |
