AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene016863

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene016863.t1 MTR_5g087790 97.120 625 8 1 1 625 1 615 0.0 1266
MS.gene016863.t1 MTR_3g078770 67.125 654 156 21 1 623 2 627 0.0 803
MS.gene016863.t1 MTR_2g098470 63.961 308 100 4 35 333 24 329 1.30e-133 405
MS.gene016863.t1 MTR_3g087530 62.791 258 85 4 46 298 29 280 9.38e-110 337
MS.gene016863.t1 MTR_6g460640 38.654 520 281 11 37 550 31 518 9.18e-107 337
MS.gene016863.t1 MTR_6g060600 50.000 314 149 4 26 338 20 326 5.33e-106 335
MS.gene016863.t1 MTR_8g091370 60.837 263 97 3 39 298 12 271 4.31e-105 325
MS.gene016863.t1 MTR_3g010790 55.702 228 100 1 103 330 1 227 2.05e-87 281
MS.gene016863.t1 MTR_1g024420 44.231 104 56 1 44 145 5 108 4.35e-27 106
MS.gene016863.t1 MTR_7g095580 43.269 104 47 3 92 186 1 101 3.11e-19 83.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene016863.t1 AT3G20770 61.035 657 191 13 2 623 1 627 0.0 745
MS.gene016863.t1 AT2G27050 59.594 641 183 20 1 623 1 583 0.0 673
MS.gene016863.t1 AT1G73730 61.682 321 92 6 34 336 11 318 1.10e-131 398
MS.gene016863.t1 AT1G73730 61.682 321 92 6 34 336 23 330 1.49e-131 398
MS.gene016863.t1 AT5G21120 46.824 425 177 9 22 432 24 413 1.19e-114 352
MS.gene016863.t1 AT5G21120 46.824 425 177 9 22 432 24 413 1.19e-114 352
MS.gene016863.t1 AT5G21120 48.086 418 182 9 22 432 31 420 1.31e-114 353
MS.gene016863.t1 AT5G10120 57.818 275 109 4 28 298 4 275 2.15e-105 327
MS.gene016863.t1 AT5G65100 42.472 445 200 12 44 445 33 464 1.35e-100 317

Find 191 sgRNAs with CRISPR-Local

Find 218 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCTCGGTAGCATGAAAATT+AGG 0.178400 5.2:+74442543 None:intergenic
AAGGCACAAGGCTTTGTTTA+TGG 0.190580 5.2:-74443539 MS.gene016863:CDS
CCACCTTCATTCGATTTAAC+TGG 0.245739 5.2:-74442453 MS.gene016863:CDS
GGTGGAGGGCCTTGATCTTT+AGG 0.277617 5.2:+74443185 None:intergenic
TTTAACTGGGTTTGGAGTTT+CGG 0.307024 5.2:-74442439 MS.gene016863:CDS
AAGCTTTGTGGGAAAATAAC+TGG 0.313704 5.2:+74442516 None:intergenic
GCAGGCTGAACTGTAGAATT+AGG 0.320347 5.2:+74442486 None:intergenic
GATCTTTAGGCAAACCGATC+TGG 0.332130 5.2:+74443198 None:intergenic
AGGCACAAGGCTTTGTTTAT+GGG 0.334965 5.2:-74443538 MS.gene016863:CDS
ATCTGCTTGATACTTGGATA+TGG 0.336300 5.2:+74443418 None:intergenic
GTATGGTTCTTCATGTGATT+TGG 0.348025 5.2:-74442109 MS.gene016863:CDS
ACACACCTTGCAAGAATTAC+AGG 0.349517 5.2:-74443345 MS.gene016863:CDS
TCATCCTCGACCACCGAATC+TGG 0.353514 5.2:+74443773 None:intergenic
TGCGTTATCTGCTTGATACT+TGG 0.353824 5.2:+74443412 None:intergenic
AAGCCAGGTTGCGCTTTCCT+TGG 0.356760 5.2:+74443025 None:intergenic
AACAACAAGATGTTTCAATA+TGG 0.364077 5.2:-74442023 MS.gene016863:CDS
CCTTTCAAGATAGGTCTTCC+AGG 0.366977 5.2:-74442626 MS.gene016863:CDS
TTGCATCCATCATTCTTTCC+TGG 0.368112 5.2:+74443386 None:intergenic
ATCTTTAGGCAAACCGATCT+GGG 0.368749 5.2:+74443199 None:intergenic
TACCTCCACCAGAGGATAAC+GGG 0.368904 5.2:+74442946 None:intergenic
AAGTCATGAGGTTTCTTGTA+TGG 0.369753 5.2:+74443164 None:intergenic
ATTATTGTTGTTGTTGAGGT+TGG 0.371583 5.2:+74442143 None:intergenic
TTGCGAATCTTGGCTATATC+AGG 0.374628 5.2:+74443089 None:intergenic
CCTCGGTAGCATGAAAATTA+GGG 0.374975 5.2:+74442544 None:intergenic
GTCCTGTTGTTGCTGAATGA+TGG 0.379003 5.2:+74442266 None:intergenic
CCTCCACCATGGTGGCCAAC+CGG 0.379505 5.2:-74443239 MS.gene016863:CDS
ATCAATTCCTTCTTTAGCCT+TGG 0.381143 5.2:+74443664 None:intergenic
TCATTCGATTTAACTGGGTT+TGG 0.382118 5.2:-74442447 MS.gene016863:CDS
TTCAATAACTACACAATTGG+TGG 0.384657 5.2:+74442341 None:intergenic
CCTCACGAGCTTGCGAATCT+TGG 0.387734 5.2:+74443079 None:intergenic
TGGTGGAGGTACTGGTTCTA+TGG 0.388085 5.2:-74442934 MS.gene016863:CDS
GGTTTCAAAAGGAGAGTTCA+TGG 0.396115 5.2:+74442164 None:intergenic
AGAAACAGTCCTGCAGGTTA+TGG 0.397401 5.2:-74442570 MS.gene016863:CDS
TTATCCTCTGGTGGAGGTAC+TGG 0.399202 5.2:-74442942 MS.gene016863:CDS
AATCTTCATCCATCCAATCT+TGG 0.400017 5.2:-74442831 MS.gene016863:CDS
CATTCTATCCATCCCAAGAT+TGG 0.409448 5.2:+74442818 None:intergenic
TTGTGGTACACTTGGGGAAG+GGG 0.411806 5.2:-74443822 MS.gene016863:CDS
TAGGTTGAACAAAGCTTTGT+GGG 0.411860 5.2:+74442505 None:intergenic
CTCGCCTTGCCTTTCAAGAT+AGG 0.415938 5.2:-74442635 MS.gene016863:CDS
CAAGCAGATAACGCAATTCC+AGG 0.415992 5.2:-74443404 MS.gene016863:CDS
TTGATTGATGATGGCAAGCC+AGG 0.425788 5.2:+74443010 None:intergenic
AATAATATGCATCCCATGTA+TGG 0.430283 5.2:-74442126 MS.gene016863:CDS
TCCTGTTGTTGCTGAATGAT+GGG 0.434795 5.2:+74442267 None:intergenic
ATCTTCATCCATCCAATCTT+GGG 0.436018 5.2:-74442830 MS.gene016863:CDS
GGCAAGGCAGTCTCAAGAAC+AGG 0.441318 5.2:-74443633 MS.gene016863:CDS
TGATGAGAAGGTTGCTGCAC+TGG 0.445924 5.2:+74442783 None:intergenic
TGAGGTTTCTTGTATGGTGG+AGG 0.446444 5.2:+74443170 None:intergenic
TTGTTGAGGTTGGTTTCAAA+AGG 0.451254 5.2:+74442153 None:intergenic
GGGAGAGGTTGTCACAAACT+TGG 0.451465 5.2:-74442754 MS.gene016863:CDS
GAGGATCGCAGTGCTGCATA+AGG 0.461372 5.2:+74443294 None:intergenic
CACCTTCATTCGATTTAACT+GGG 0.462918 5.2:-74442452 MS.gene016863:CDS
GGCTATGATACACATGTTAT+AGG 0.462962 5.2:-74442381 MS.gene016863:CDS
TCACAAACTTGGATTTCATT+CGG 0.464079 5.2:-74442743 MS.gene016863:CDS
TGATTATAGTGATGAAGAAA+TGG 0.464489 5.2:-74443753 MS.gene016863:CDS
GGATTCCTCTTGATTGATGA+TGG 0.464516 5.2:+74443001 None:intergenic
TTTGTGGTACACTTGGGGAA+GGG 0.466355 5.2:-74443823 MS.gene016863:CDS
GCCCATCATTCAGCAACAAC+AGG 0.469177 5.2:-74442268 MS.gene016863:CDS
GGCCAACCGGGACTGAAGAC+TGG 0.469478 5.2:-74443226 MS.gene016863:CDS
TTGGATGGATGAAGATTCTC+GGG 0.470657 5.2:+74442837 None:intergenic
GCATATTATTGTTGTTGTTG+AGG 0.474406 5.2:+74442139 None:intergenic
CAGGCAAACCGAGCCAGATT+CGG 0.479153 5.2:-74443786 MS.gene016863:CDS
TCGTGAATGGTGGAAGGATA+AGG 0.479265 5.2:-74443468 MS.gene016863:CDS
GAAAATGATGGAGGTTTGTA+AGG 0.484505 5.2:-74443558 MS.gene016863:CDS
TCCTCAGAGGCGTTTCCCAT+TGG 0.490597 5.2:-74443273 MS.gene016863:CDS
GAGAGTTCATGGCCTTGAAC+CGG 0.490862 5.2:+74442175 None:intergenic
AAGGGGATATTTCTTCTGTC+AGG 0.493214 5.2:-74443805 MS.gene016863:CDS
GAGGATTGCCCTTCTCCAAT+GGG 0.493994 5.2:+74443258 None:intergenic
ACGAAGATTGTCAGATGCTC+CGG 0.495666 5.2:+74443487 None:intergenic
ATTGGATGGATGAAGATTCT+CGG 0.495807 5.2:+74442836 None:intergenic
AATTCCCGAGAAGGGAAAAC+CGG 0.496336 5.2:-74443513 MS.gene016863:CDS
TTGTCAGATGCTCCGGTCAC+CGG 0.496468 5.2:+74443494 None:intergenic
GCAACCTTCTCATCAAATCA+AGG 0.497251 5.2:-74442775 MS.gene016863:CDS
GGGCCACCAGTCTTCAGTCC+CGG 0.499009 5.2:+74443220 None:intergenic
CCGGTTGGCCACCATGGTGG+AGG 0.499341 5.2:+74443239 None:intergenic
AAATCAGTTTGACCGGTTCA+AGG 0.500225 5.2:-74442187 MS.gene016863:CDS
CATCAATCAAGAGGAATCCT+TGG 0.505411 5.2:-74442997 MS.gene016863:CDS
GATGATGATGTTTGAGGACA+TGG 0.505605 5.2:-74443870 MS.gene016863:CDS
TCTTGCAAGGTGTGTGGAGT+TGG 0.508004 5.2:+74443353 None:intergenic
TGCAGTGAGTATGATGTTGA+TGG 0.508204 5.2:-74442900 MS.gene016863:CDS
ATGATCAGCGACCTTATGTC+AGG 0.516438 5.2:-74442402 MS.gene016863:CDS
CGAGCCAGATTCGGTGGTCG+AGG 0.516671 5.2:-74443777 MS.gene016863:CDS
CTCGACCACCGAATCTGGCT+CGG 0.517344 5.2:+74443778 None:intergenic
GAATTACAGGACACAACCTT+GGG 0.517537 5.2:-74443332 MS.gene016863:CDS
TAACGACTTCAACATGATGA+TGG 0.518203 5.2:-74442706 MS.gene016863:CDS
GGAGGATTGCCCTTCTCCAA+TGG 0.519182 5.2:+74443257 None:intergenic
ATCGGTTTGCCTAAAGATCA+AGG 0.519416 5.2:-74443194 MS.gene016863:CDS
ATGAGCTTGAGCGGAGGATG+TGG 0.520497 5.2:-74443724 MS.gene016863:CDS
ATCACATGAAGAACCATACA+TGG 0.521967 5.2:+74442113 None:intergenic
AGAATTACAGGACACAACCT+TGG 0.524464 5.2:-74443333 MS.gene016863:CDS
CTCCACCATGGTGGCCAACC+GGG 0.526692 5.2:-74443238 MS.gene016863:CDS
GTGTATCATAGCCTGACATA+AGG 0.531266 5.2:+74442391 None:intergenic
GAGGCGTTTCCCATTGGAGA+AGG 0.531537 5.2:-74443267 MS.gene016863:CDS
GAGGTTTCTTGTATGGTGGA+GGG 0.533491 5.2:+74443171 None:intergenic
GCAATTCCAGGAAAGAATGA+TGG 0.536106 5.2:-74443392 MS.gene016863:CDS
TCTCCCTTGATTTGATGAGA+AGG 0.537373 5.2:+74442771 None:intergenic
ATTCAATTGATGATTGTCCC+TGG 0.537403 5.2:+74442608 None:intergenic
ATCTTGGGATGGATAGAATG+AGG 0.537865 5.2:-74442815 MS.gene016863:CDS
TAGATCCTCCTTAAAATCAA+AGG 0.539849 5.2:+74442083 None:intergenic
GTACCTCCACCAGAGGATAA+CGG 0.539881 5.2:+74442945 None:intergenic
TCAGTCCCGGTTGGCCACCA+TGG 0.540302 5.2:+74443233 None:intergenic
ACTTGGATTTCATTCGGAAG+AGG 0.540565 5.2:-74442737 MS.gene016863:CDS
TTAGGTTGAACAAAGCTTTG+TGG 0.541625 5.2:+74442504 None:intergenic
GGGTTTGGAGTTTCGGAGGA+CGG 0.542268 5.2:-74442432 MS.gene016863:CDS
GAACAAACCAAGGCTAAAGA+AGG 0.542936 5.2:-74443671 MS.gene016863:CDS
TTTGAATCAAGGAATGGTGA+TGG 0.544516 5.2:-74442235 MS.gene016863:CDS
CAGCCAAGGAAAGCGCAACC+TGG 0.544615 5.2:-74443028 MS.gene016863:CDS
GAAGTACATGCTGAAAATGA+TGG 0.545558 5.2:-74443570 MS.gene016863:CDS
AGCTTGAGCGGAGGATGTGG+AGG 0.545764 5.2:-74443721 MS.gene016863:CDS
GAGAAGGGAAAACCGGTGAC+CGG 0.547110 5.2:-74443506 MS.gene016863:CDS
AGAAACAGAAACAGTCCTGC+AGG 0.548675 5.2:-74442576 MS.gene016863:CDS
GGACTGTTTCTGTTTCTATG+TGG 0.550312 5.2:+74442582 None:intergenic
TGATACTTGGATATGGCAGC+AGG 0.550770 5.2:+74443425 None:intergenic
GAAGGTGGAACTAAACTAGC+AGG 0.551330 5.2:+74442468 None:intergenic
AGGATAAGGTTCGGTTCGAT+AGG 0.552012 5.2:-74443454 MS.gene016863:CDS
GCTGAATGATGGGCTGAGAA+AGG 0.553081 5.2:+74442277 None:intergenic
GCTGAATGATGGGCTGAGAA+AGG 0.553081 5.2:+74442310 None:intergenic
TTCTCATCAAATCAAGGGAG+AGG 0.554659 5.2:-74442769 MS.gene016863:CDS
CTTTCAAGATAGGTCTTCCA+GGG 0.555713 5.2:-74442625 MS.gene016863:CDS
TATGGGATAATTCCCGAGAA+GGG 0.556990 5.2:-74443521 MS.gene016863:CDS
GGAAAAGATGATGATGTTTG+AGG 0.557260 5.2:-74443876 None:intergenic
CTATCCATCCCAAGATTGGA+TGG 0.557944 5.2:+74442822 None:intergenic
CTGACAATCTTCGTGAATGG+TGG 0.558385 5.2:-74443478 MS.gene016863:CDS
GGTGTGTGGAGTTGGACCTA+TGG 0.558968 5.2:+74443361 None:intergenic
CCTGGAAGACCTATCTTGAA+AGG 0.560673 5.2:+74442626 None:intergenic
AGGATCGCAGTGCTGCATAA+GGG 0.561714 5.2:+74443295 None:intergenic
CTACAACTACAAGGAGGAGT+AGG 0.563021 5.2:-74442063 MS.gene016863:CDS
TTAGGGTTGCCATAACCTGC+AGG 0.563126 5.2:+74442561 None:intergenic
AACCCAGTTAAATCGAATGA+AGG 0.563631 5.2:+74442450 None:intergenic
GCGAGGAAAATCAGTTTGAC+CGG 0.565875 5.2:-74442194 MS.gene016863:CDS
CATCTGACAATCTTCGTGAA+TGG 0.567255 5.2:-74443481 MS.gene016863:CDS
CCAAGATTCGCAAGCTCGTG+AGG 0.567603 5.2:-74443079 MS.gene016863:CDS
TCATGAGGTTTCTTGTATGG+TGG 0.567990 5.2:+74443167 None:intergenic
CACCAGTCTTCAGTCCCGGT+TGG 0.570122 5.2:+74443224 None:intergenic
TTATGGGATAATTCCCGAGA+AGG 0.572124 5.2:-74443522 MS.gene016863:CDS
AATGGTGGAAGGATAAGGTT+CGG 0.572803 5.2:-74443463 MS.gene016863:CDS
AGGCGTTTCCCATTGGAGAA+GGG 0.573544 5.2:-74443266 MS.gene016863:CDS
AGAAGGAATTGATGCTGCAA+AGG 0.574701 5.2:-74443654 MS.gene016863:CDS
GCAGTGAGTATGATGTTGAT+GGG 0.574936 5.2:-74442899 MS.gene016863:CDS
GTCCCGGTTGGCCACCATGG+TGG 0.575585 5.2:+74443236 None:intergenic
TGGATATAGTTCTCGAGCCA+AGG 0.577085 5.2:+74442980 None:intergenic
AACTGGGTTTGGAGTTTCGG+AGG 0.578482 5.2:-74442436 MS.gene016863:CDS
AATGATGGATGCAATTCCAT+AGG 0.584074 5.2:-74443377 MS.gene016863:CDS
CGAGTCAAACTTTGATGTGG+AGG 0.584361 5.2:-74442868 MS.gene016863:CDS
AATGGGAAACGCCTCTGAGG+AGG 0.586375 5.2:+74443275 None:intergenic
TAGTGATGAAGAAATGGATG+TGG 0.587114 5.2:-74443747 MS.gene016863:CDS
TGTAATTCTTGCAAGGTGTG+TGG 0.593213 5.2:+74443347 None:intergenic
TGTGTCCTGTAATTCTTGCA+AGG 0.594212 5.2:+74443340 None:intergenic
TCTTGGGATGGATAGAATGA+GGG 0.594489 5.2:-74442814 MS.gene016863:CDS
TCAAGATAAAATGACAGCCA+AGG 0.597129 5.2:-74443042 MS.gene016863:CDS
TCATCCATCCAATCTTGGGA+TGG 0.598664 5.2:-74442826 MS.gene016863:CDS
CCAGTTAAATCGAATGAAGG+TGG 0.598931 5.2:+74442453 None:intergenic
CTTGGGATGGATAGAATGAG+GGG 0.601634 5.2:-74442813 MS.gene016863:CDS
CAATCTTCGTGAATGGTGGA+AGG 0.601878 5.2:-74443474 MS.gene016863:CDS
GGCTGATAAGAGAGAACCCA+AGG 0.606735 5.2:+74443316 None:intergenic
CAACCTTCTCATCAAATCAA+GGG 0.606873 5.2:-74442774 MS.gene016863:CDS
GGCAGTCTCAAGAACAGGCG+AGG 0.607320 5.2:-74443628 MS.gene016863:CDS
AAGGAGGATCTACAACTACA+AGG 0.608788 5.2:-74442072 MS.gene016863:CDS
AAGGTTCGGTTCGATAGGAA+TGG 0.610184 5.2:-74443449 MS.gene016863:CDS
GCAAACCGAGCCAGATTCGG+TGG 0.610299 5.2:-74443783 MS.gene016863:CDS
ACTACAAGGAGGAGTAGGAA+TGG 0.611304 5.2:-74442058 MS.gene016863:CDS
AAGATGTCAAGAGCTCAAGA+TGG 0.612194 5.2:-74443599 MS.gene016863:CDS
GCTTCGCTGTAAGCGCATTG+AGG 0.613195 5.2:+74442657 None:intergenic
CGGCGAGTCAAACTTTGATG+TGG 0.614982 5.2:-74442871 MS.gene016863:CDS
TCCAATGGGAAACGCCTCTG+AGG 0.618975 5.2:+74443272 None:intergenic
GAAGACTGGTGGCCCCAGAT+CGG 0.620125 5.2:-74443212 MS.gene016863:CDS
AAGACCTATCTTGAAAGGCA+AGG 0.620631 5.2:+74442631 None:intergenic
TATGATGTTGATGGGGCTGA+CGG 0.622733 5.2:-74442891 MS.gene016863:CDS
GCTTGCCATCATCAATCAAG+AGG 0.624863 5.2:-74443006 MS.gene016863:CDS
GAATTGATGCTGCAAAGGCA+AGG 0.624873 5.2:-74443649 MS.gene016863:CDS
GAATCAAGGAATGGTGATGG+AGG 0.630262 5.2:-74442232 MS.gene016863:CDS
ATGGAGGTTTGTAAGGCACA+AGG 0.638043 5.2:-74443551 MS.gene016863:CDS
GAAAATAACTGGCTTAACCT+CGG 0.643010 5.2:+74442527 None:intergenic
AGTCTCAAGAACAGGCGAGG+AGG 0.643483 5.2:-74443625 MS.gene016863:CDS
GCTTGAGCGGAGGATGTGGA+GGG 0.653404 5.2:-74443720 MS.gene016863:CDS
TGGATGTGGATGAGCTTGAG+CGG 0.660750 5.2:-74443733 MS.gene016863:CDS
CAACCGGGACTGAAGACTGG+TGG 0.661902 5.2:-74443223 MS.gene016863:CDS
TCTTTAGGCAAACCGATCTG+GGG 0.665997 5.2:+74443200 None:intergenic
ATGATGATGTTTGAGGACAT+GGG 0.668420 5.2:-74443869 MS.gene016863:CDS
AGCACTGCGATCCTCCTCAG+AGG 0.670631 5.2:-74443286 MS.gene016863:CDS
ACCTCCACCAGAGGATAACG+GGG 0.673590 5.2:+74442947 None:intergenic
TCACATGAAGAACCATACAT+GGG 0.685805 5.2:+74442114 None:intergenic
GCGACTGAAAGAACAAACCA+AGG 0.688069 5.2:-74443681 MS.gene016863:CDS
CAGTGAGTATGATGTTGATG+GGG 0.693933 5.2:-74442898 MS.gene016863:CDS
AGGGCAATCCTCCACCATGG+TGG 0.709968 5.2:-74443247 MS.gene016863:CDS
ATGTGGATGAGCTTGAGCGG+AGG 0.710465 5.2:-74443730 MS.gene016863:CDS
AGAAGGGCAATCCTCCACCA+TGG 0.713618 5.2:-74443250 MS.gene016863:CDS
AGAACCAGTACCTCCACCAG+AGG 0.719646 5.2:+74442938 None:intergenic
GTACATGCTGAAAATGATGG+AGG 0.724912 5.2:-74443567 MS.gene016863:CDS
CTCCACCAGAGGATAACGGG+GGG 0.729921 5.2:+74442949 None:intergenic
CCTCCACCAGAGGATAACGG+GGG 0.744768 5.2:+74442948 None:intergenic
GAGGATCTACAACTACAAGG+AGG 0.776973 5.2:-74442069 MS.gene016863:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTCAATAACTACACAAT+TGG + chr5.2:74443548-74443567 None:intergenic 20.0%
! AACAACAAGATGTTTCAATA+TGG - chr5.2:74443860-74443879 MS.gene016863:CDS 25.0%
! TGATTATAGTGATGAAGAAA+TGG - chr5.2:74442130-74442149 MS.gene016863:CDS 25.0%
!! GACAATTTCTTTTTGAATCA+AGG - chr5.2:74443637-74443656 MS.gene016863:CDS 25.0%
!! TTTCTTTTTGAATCAAGGAA+TGG - chr5.2:74443642-74443661 MS.gene016863:CDS 25.0%
AATAATATGCATCCCATGTA+TGG - chr5.2:74443757-74443776 MS.gene016863:CDS 30.0%
TAGATCCTCCTTAAAATCAA+AGG + chr5.2:74443803-74443822 None:intergenic 30.0%
TCACAAACTTGGATTTCATT+CGG - chr5.2:74443140-74443159 MS.gene016863:CDS 30.0%
TTCAATAACTACACAATTGG+TGG + chr5.2:74443545-74443564 None:intergenic 30.0%
! ATTATTGTTGTTGTTGAGGT+TGG + chr5.2:74443743-74443762 None:intergenic 30.0%
! GCATATTATTGTTGTTGTTG+AGG + chr5.2:74443747-74443766 None:intergenic 30.0%
! TTGAAAAAAGCATGGAAAGT+TGG - chr5.2:74442740-74442759 MS.gene016863:CDS 30.0%
!! TTTGGCATCCTTTGATTTTA+AGG - chr5.2:74443792-74443811 MS.gene016863:CDS 30.0%
!!! CATTTTATCTTGAAGGCATT+TGG + chr5.2:74442834-74442853 None:intergenic 30.0%
!!! TTTTGTTGTTGCTGAATGAT+GGG + chr5.2:74443586-74443605 None:intergenic 30.0%
AACCCAGTTAAATCGAATGA+AGG + chr5.2:74443436-74443455 None:intergenic 35.0%
AAGTCATGAGGTTTCTTGTA+TGG + chr5.2:74442722-74442741 None:intergenic 35.0%
AATCTTCATCCATCCAATCT+TGG - chr5.2:74443052-74443071 MS.gene016863:CDS 35.0%
ATCAATTCCTTCTTTAGCCT+TGG + chr5.2:74442222-74442241 None:intergenic 35.0%
ATCACATGAAGAACCATACA+TGG + chr5.2:74443773-74443792 None:intergenic 35.0%
ATCTGCTTGATACTTGGATA+TGG + chr5.2:74442468-74442487 None:intergenic 35.0%
ATCTTCATCCATCCAATCTT+GGG - chr5.2:74443053-74443072 MS.gene016863:CDS 35.0%
ATTGGATGGATGAAGATTCT+CGG + chr5.2:74443050-74443069 None:intergenic 35.0%
CAACCTTCTCATCAAATCAA+GGG - chr5.2:74443109-74443128 MS.gene016863:CDS 35.0%
CACCTTCATTCGATTTAACT+GGG - chr5.2:74443431-74443450 MS.gene016863:CDS 35.0%
CTCATGACTTGAAAAAAGCA+TGG - chr5.2:74442732-74442751 MS.gene016863:CDS 35.0%
GAAGTACATGCTGAAAATGA+TGG - chr5.2:74442313-74442332 MS.gene016863:CDS 35.0%
GGCTATGATACACATGTTAT+AGG - chr5.2:74443502-74443521 MS.gene016863:CDS 35.0%
GTATGGTTCTTCATGTGATT+TGG - chr5.2:74443774-74443793 MS.gene016863:CDS 35.0%
TAACGACTTCAACATGATGA+TGG - chr5.2:74443177-74443196 MS.gene016863:CDS 35.0%
TAGTGATGAAGAAATGGATG+TGG - chr5.2:74442136-74442155 MS.gene016863:CDS 35.0%
TCAAGATAAAATGACAGCCA+AGG - chr5.2:74442841-74442860 MS.gene016863:CDS 35.0%
TCACATGAAGAACCATACAT+GGG + chr5.2:74443772-74443791 None:intergenic 35.0%
TCATTCGATTTAACTGGGTT+TGG - chr5.2:74443436-74443455 MS.gene016863:CDS 35.0%
TTTGAATCAAGGAATGGTGA+TGG - chr5.2:74443648-74443667 MS.gene016863:CDS 35.0%
! AAGCTTTGTGGGAAAATAAC+TGG + chr5.2:74443370-74443389 None:intergenic 35.0%
! ATGATGATGTTTGAGGACAT+GGG - chr5.2:74442014-74442033 MS.gene016863:CDS 35.0%
! ATGTGTTTTGTGGTACACTT+GGG - chr5.2:74442054-74442073 MS.gene016863:CDS 35.0%
! ATTCAATTGATGATTGTCCC+TGG + chr5.2:74443278-74443297 None:intergenic 35.0%
! GAAAATAACTGGCTTAACCT+CGG + chr5.2:74443359-74443378 None:intergenic 35.0%
! GAAAATGATGGAGGTTTGTA+AGG - chr5.2:74442325-74442344 MS.gene016863:CDS 35.0%
! TAGGTTGAACAAAGCTTTGT+GGG + chr5.2:74443381-74443400 None:intergenic 35.0%
! TTTAACTGGGTTTGGAGTTT+CGG - chr5.2:74443444-74443463 MS.gene016863:CDS 35.0%
!! AATGATGGATGCAATTCCAT+AGG - chr5.2:74442506-74442525 MS.gene016863:CDS 35.0%
!! TTAGGTTGAACAAAGCTTTG+TGG + chr5.2:74443382-74443401 None:intergenic 35.0%
!! TTGTTGAGGTTGGTTTCAAA+AGG + chr5.2:74443733-74443752 None:intergenic 35.0%
!!! CATGCTTTTTTCAAGTCATG+AGG + chr5.2:74442734-74442753 None:intergenic 35.0%
!!! GTTTTGTTGTTGCTGAATGA+TGG + chr5.2:74443587-74443606 None:intergenic 35.0%
!!! TGGCTGTCATTTTATCTTGA+AGG + chr5.2:74442841-74442860 None:intergenic 35.0%
AAGACCTATCTTGAAAGGCA+AGG + chr5.2:74443255-74443274 None:intergenic 40.0%
AAGATGTCAAGAGCTCAAGA+TGG - chr5.2:74442284-74442303 MS.gene016863:CDS 40.0%
AAGGAGGATCTACAACTACA+AGG - chr5.2:74443811-74443830 MS.gene016863:CDS 40.0%
AAGGGGATATTTCTTCTGTC+AGG - chr5.2:74442078-74442097 MS.gene016863:CDS 40.0%
ACACACCTTGCAAGAATTAC+AGG - chr5.2:74442538-74442557 MS.gene016863:CDS 40.0%
ACCTCGGTAGCATGAAAATT+AGG + chr5.2:74443343-74443362 None:intergenic 40.0%
ACTTGGATTTCATTCGGAAG+AGG - chr5.2:74443146-74443165 MS.gene016863:CDS 40.0%
AGAAGGAATTGATGCTGCAA+AGG - chr5.2:74442229-74442248 MS.gene016863:CDS 40.0%
AGAATTACAGGACACAACCT+TGG - chr5.2:74442550-74442569 MS.gene016863:CDS 40.0%
ATCTTGGGATGGATAGAATG+AGG - chr5.2:74443068-74443087 MS.gene016863:CDS 40.0%
ATCTTTAGGCAAACCGATCT+GGG + chr5.2:74442687-74442706 None:intergenic 40.0%
CAGTGAGTATGATGTTGATG+GGG - chr5.2:74442985-74443004 MS.gene016863:CDS 40.0%
CATCAATCAAGAGGAATCCT+TGG - chr5.2:74442886-74442905 MS.gene016863:CDS 40.0%
CATCTGACAATCTTCGTGAA+TGG - chr5.2:74442402-74442421 MS.gene016863:CDS 40.0%
CATTCTATCCATCCCAAGAT+TGG + chr5.2:74443068-74443087 None:intergenic 40.0%
CCACCTTCATTCGATTTAAC+TGG - chr5.2:74443430-74443449 MS.gene016863:CDS 40.0%
CCAGTTAAATCGAATGAAGG+TGG + chr5.2:74443433-74443452 None:intergenic 40.0%
CCTCGGTAGCATGAAAATTA+GGG + chr5.2:74443342-74443361 None:intergenic 40.0%
CTTTCAAGATAGGTCTTCCA+GGG - chr5.2:74443258-74443277 MS.gene016863:CDS 40.0%
GAACAAACCAAGGCTAAAGA+AGG - chr5.2:74442212-74442231 MS.gene016863:CDS 40.0%
GAATTACAGGACACAACCTT+GGG - chr5.2:74442551-74442570 MS.gene016863:CDS 40.0%
GCAACCTTCTCATCAAATCA+AGG - chr5.2:74443108-74443127 MS.gene016863:CDS 40.0%
GCAATTCCAGGAAAGAATGA+TGG - chr5.2:74442491-74442510 MS.gene016863:CDS 40.0%
GCAGTGAGTATGATGTTGAT+GGG - chr5.2:74442984-74443003 MS.gene016863:CDS 40.0%
GGATTCCTCTTGATTGATGA+TGG + chr5.2:74442885-74442904 None:intergenic 40.0%
GGTTTCAAAAGGAGAGTTCA+TGG + chr5.2:74443722-74443741 None:intergenic 40.0%
GTACATGCTGAAAATGATGG+AGG - chr5.2:74442316-74442335 MS.gene016863:CDS 40.0%
GTGTATCATAGCCTGACATA+AGG + chr5.2:74443495-74443514 None:intergenic 40.0%
TATGGGATAATTCCCGAGAA+GGG - chr5.2:74442362-74442381 MS.gene016863:CDS 40.0%
TCATGAGGTTTCTTGTATGG+TGG + chr5.2:74442719-74442738 None:intergenic 40.0%
TCCTGTTGTTGCTGAATGAT+GGG + chr5.2:74443619-74443638 None:intergenic 40.0%
TCTTGGGATGGATAGAATGA+GGG - chr5.2:74443069-74443088 MS.gene016863:CDS 40.0%
TGCAGTGAGTATGATGTTGA+TGG - chr5.2:74442983-74443002 MS.gene016863:CDS 40.0%
TGCGTTATCTGCTTGATACT+TGG + chr5.2:74442474-74442493 None:intergenic 40.0%
TGTAATTCTTGCAAGGTGTG+TGG + chr5.2:74442539-74442558 None:intergenic 40.0%
TGTGTCCTGTAATTCTTGCA+AGG + chr5.2:74442546-74442565 None:intergenic 40.0%
TTATGGGATAATTCCCGAGA+AGG - chr5.2:74442361-74442380 MS.gene016863:CDS 40.0%
TTCTCATCAAATCAAGGGAG+AGG - chr5.2:74443114-74443133 MS.gene016863:CDS 40.0%
TTGCATCCATCATTCTTTCC+TGG + chr5.2:74442500-74442519 None:intergenic 40.0%
TTGCGAATCTTGGCTATATC+AGG + chr5.2:74442797-74442816 None:intergenic 40.0%
TTGGATGGATGAAGATTCTC+GGG + chr5.2:74443049-74443068 None:intergenic 40.0%
! AAATCAGTTTGACCGGTTCA+AGG - chr5.2:74443696-74443715 MS.gene016863:CDS 40.0%
! AATGGTGGAAGGATAAGGTT+CGG - chr5.2:74442420-74442439 MS.gene016863:CDS 40.0%
! CATGGGATTTTGTGGTGATT+TGG - chr5.2:74442031-74442050 MS.gene016863:CDS 40.0%
! GATGAAGATTCTCGGGTTTT+CGG + chr5.2:74443042-74443061 None:intergenic 40.0%
! GATGTGTTTTGTGGTACACT+TGG - chr5.2:74442053-74442072 MS.gene016863:CDS 40.0%
! TAAGGTCGCTGATCATTTTC+TGG + chr5.2:74443477-74443496 None:intergenic 40.0%
! TCTCCCTTGATTTGATGAGA+AGG + chr5.2:74443115-74443134 None:intergenic 40.0%
! TGCTCGCATGTGTACATTTT+CGG + chr5.2:74443205-74443224 None:intergenic 40.0%
! TGTGTTTTGTGGTACACTTG+GGG - chr5.2:74442055-74442074 MS.gene016863:CDS 40.0%
! TTTGAGGACATGGGATTTTG+TGG - chr5.2:74442023-74442042 MS.gene016863:CDS 40.0%
!! AAGGCACAAGGCTTTGTTTA+TGG - chr5.2:74442344-74442363 MS.gene016863:CDS 40.0%
!! AGGCACAAGGCTTTGTTTAT+GGG - chr5.2:74442345-74442364 MS.gene016863:CDS 40.0%
!! ATCGGTTTGCCTAAAGATCA+AGG - chr5.2:74442689-74442708 MS.gene016863:CDS 40.0%
!! GGACTGTTTCTGTTTCTATG+TGG + chr5.2:74443304-74443323 None:intergenic 40.0%
!! GGCATCCTTTGATTTTAAGG+AGG - chr5.2:74443795-74443814 MS.gene016863:CDS 40.0%
!! GGTGATTTGGATGTGTTTTG+TGG - chr5.2:74442044-74442063 MS.gene016863:CDS 40.0%
AATTCCCGAGAAGGGAAAAC+CGG - chr5.2:74442370-74442389 MS.gene016863:CDS 45.0%
ACGAAGATTGTCAGATGCTC+CGG + chr5.2:74442399-74442418 None:intergenic 45.0%
ACTACAAGGAGGAGTAGGAA+TGG - chr5.2:74443825-74443844 MS.gene016863:CDS 45.0%
AGAAACAGAAACAGTCCTGC+AGG - chr5.2:74443307-74443326 MS.gene016863:CDS 45.0%
AGAAACAGTCCTGCAGGTTA+TGG - chr5.2:74443313-74443332 MS.gene016863:CDS 45.0%
ATGATCAGCGACCTTATGTC+AGG - chr5.2:74443481-74443500 MS.gene016863:CDS 45.0%
ATGGAGGTTTGTAAGGCACA+AGG - chr5.2:74442332-74442351 MS.gene016863:CDS 45.0%
CAAGCAGATAACGCAATTCC+AGG - chr5.2:74442479-74442498 MS.gene016863:CDS 45.0%
CCTGGAAGACCTATCTTGAA+AGG + chr5.2:74443260-74443279 None:intergenic 45.0%
CCTTTCAAGATAGGTCTTCC+AGG - chr5.2:74443257-74443276 MS.gene016863:CDS 45.0%
CGAGTCAAACTTTGATGTGG+AGG - chr5.2:74443015-74443034 MS.gene016863:CDS 45.0%
CTACAACTACAAGGAGGAGT+AGG - chr5.2:74443820-74443839 MS.gene016863:CDS 45.0%
CTATCCATCCCAAGATTGGA+TGG + chr5.2:74443064-74443083 None:intergenic 45.0%
CTGACAATCTTCGTGAATGG+TGG - chr5.2:74442405-74442424 MS.gene016863:CDS 45.0%
CTTGGGATGGATAGAATGAG+GGG - chr5.2:74443070-74443089 MS.gene016863:CDS 45.0%
GAAGGTGGAACTAAACTAGC+AGG + chr5.2:74443418-74443437 None:intergenic 45.0%
GAATTGATGCTGCAAAGGCA+AGG - chr5.2:74442234-74442253 MS.gene016863:CDS 45.0%
GAGGATCTACAACTACAAGG+AGG - chr5.2:74443814-74443833 MS.gene016863:CDS 45.0%
GATCTTTAGGCAAACCGATC+TGG + chr5.2:74442688-74442707 None:intergenic 45.0%
GCAGGCTGAACTGTAGAATT+AGG + chr5.2:74443400-74443419 None:intergenic 45.0%
GCGACTGAAAGAACAAACCA+AGG - chr5.2:74442202-74442221 MS.gene016863:CDS 45.0%
GCGAGGAAAATCAGTTTGAC+CGG - chr5.2:74443689-74443708 MS.gene016863:CDS 45.0%
GCTTGCCATCATCAATCAAG+AGG - chr5.2:74442877-74442896 MS.gene016863:CDS 45.0%
GTCCTGTTGTTGCTGAATGA+TGG + chr5.2:74443620-74443639 None:intergenic 45.0%
TCATCCATCCAATCTTGGGA+TGG - chr5.2:74443057-74443076 MS.gene016863:CDS 45.0%
TCTTTAGGCAAACCGATCTG+GGG + chr5.2:74442686-74442705 None:intergenic 45.0%
TGAGGTTTCTTGTATGGTGG+AGG + chr5.2:74442716-74442735 None:intergenic 45.0%
TGATACTTGGATATGGCAGC+AGG + chr5.2:74442461-74442480 None:intergenic 45.0%
TGGATATAGTTCTCGAGCCA+AGG + chr5.2:74442906-74442925 None:intergenic 45.0%
TTTGTGGTACACTTGGGGAA+GGG - chr5.2:74442060-74442079 MS.gene016863:CDS 45.0%
! AAGGTTCGGTTCGATAGGAA+TGG - chr5.2:74442434-74442453 MS.gene016863:CDS 45.0%
! AGGATAAGGTTCGGTTCGAT+AGG - chr5.2:74442429-74442448 MS.gene016863:CDS 45.0%
! CAATCTTCGTGAATGGTGGA+AGG - chr5.2:74442409-74442428 MS.gene016863:CDS 45.0%
! CCCTAATTTTCATGCTACCG+AGG - chr5.2:74443339-74443358 MS.gene016863:CDS 45.0%
! GAGGTTTCTTGTATGGTGGA+GGG + chr5.2:74442715-74442734 None:intergenic 45.0%
! TATGATGTTGATGGGGCTGA+CGG - chr5.2:74442992-74443011 MS.gene016863:CDS 45.0%
! TCGTGAATGGTGGAAGGATA+AGG - chr5.2:74442415-74442434 MS.gene016863:CDS 45.0%
! TTTTGTGGTACACTTGGGGA+AGG - chr5.2:74442059-74442078 MS.gene016863:CDS 45.0%
!! GAATCAAGGAATGGTGATGG+AGG - chr5.2:74443651-74443670 MS.gene016863:CDS 45.0%
!! TTGATTGATGATGGCAAGCC+AGG + chr5.2:74442876-74442895 None:intergenic 45.0%
!!! GGCAAACTTTTTTACTCGCG+AGG - chr5.2:74443672-74443691 MS.gene016863:CDS 45.0%
AGGATCGCAGTGCTGCATAA+GGG + chr5.2:74442591-74442610 None:intergenic 50.0%
AGGCGTTTCCCATTGGAGAA+GGG - chr5.2:74442617-74442636 MS.gene016863:CDS 50.0%
CGGCGAGTCAAACTTTGATG+TGG - chr5.2:74443012-74443031 MS.gene016863:CDS 50.0%
CTCGCCTTGCCTTTCAAGAT+AGG - chr5.2:74443248-74443267 MS.gene016863:CDS 50.0%
GAGGATTGCCCTTCTCCAAT+GGG + chr5.2:74442628-74442647 None:intergenic 50.0%
GCCCATCATTCAGCAACAAC+AGG - chr5.2:74443582-74443601 MS.gene016863:CDS 50.0%
GGCTGATAAGAGAGAACCCA+AGG + chr5.2:74442570-74442589 None:intergenic 50.0%
GGGAGAGGTTGTCACAAACT+TGG - chr5.2:74443129-74443148 MS.gene016863:CDS 50.0%
GTACCTCCACCAGAGGATAA+CGG + chr5.2:74442941-74442960 None:intergenic 50.0%
TACCTCCACCAGAGGATAAC+GGG + chr5.2:74442940-74442959 None:intergenic 50.0%
TCTTGCAAGGTGTGTGGAGT+TGG + chr5.2:74442533-74442552 None:intergenic 50.0%
TGATGAGAAGGTTGCTGCAC+TGG + chr5.2:74443103-74443122 None:intergenic 50.0%
TGGATGTGGATGAGCTTGAG+CGG - chr5.2:74442150-74442169 MS.gene016863:CDS 50.0%
TTAGGGTTGCCATAACCTGC+AGG + chr5.2:74443325-74443344 None:intergenic 50.0%
TTGTGGTACACTTGGGGAAG+GGG - chr5.2:74442061-74442080 MS.gene016863:CDS 50.0%
! AACTGGGTTTGGAGTTTCGG+AGG - chr5.2:74443447-74443466 MS.gene016863:CDS 50.0%
! GAGAGTTCATGGCCTTGAAC+CGG + chr5.2:74443711-74443730 None:intergenic 50.0%
! TTATCCTCTGGTGGAGGTAC+TGG - chr5.2:74442941-74442960 MS.gene016863:CDS 50.0%
!! GATAACGGGGGGCAATAATC+TGG + chr5.2:74442926-74442945 None:intergenic 50.0%
!! GCTGAATGATGGGCTGAGAA+AGG + chr5.2:74443576-74443595 None:intergenic 50.0%
!! TGGTGGAGGTACTGGTTCTA+TGG - chr5.2:74442949-74442968 MS.gene016863:CDS 50.0%
AAGCCAGGTTGCGCTTTCCT+TGG + chr5.2:74442861-74442880 None:intergenic 55.0%
ACCTCCACCAGAGGATAACG+GGG + chr5.2:74442939-74442958 None:intergenic 55.0%
AGAACCAGTACCTCCACCAG+AGG + chr5.2:74442948-74442967 None:intergenic 55.0%
AGAAGGGCAATCCTCCACCA+TGG - chr5.2:74442633-74442652 MS.gene016863:CDS 55.0%
AGTCTCAAGAACAGGCGAGG+AGG - chr5.2:74442258-74442277 MS.gene016863:CDS 55.0%
ATGAGCTTGAGCGGAGGATG+TGG - chr5.2:74442159-74442178 MS.gene016863:CDS 55.0%
ATGTGGATGAGCTTGAGCGG+AGG - chr5.2:74442153-74442172 MS.gene016863:CDS 55.0%
CAGGCAAACCGAGCCAGATT+CGG - chr5.2:74442097-74442116 MS.gene016863:CDS 55.0%
CCAAGATTCGCAAGCTCGTG+AGG - chr5.2:74442804-74442823 MS.gene016863:CDS 55.0%
CCTCACGAGCTTGCGAATCT+TGG + chr5.2:74442807-74442826 None:intergenic 55.0%
GAGAAGGGAAAACCGGTGAC+CGG - chr5.2:74442377-74442396 MS.gene016863:CDS 55.0%
GAGGATCGCAGTGCTGCATA+AGG + chr5.2:74442592-74442611 None:intergenic 55.0%
GCTTCGCTGTAAGCGCATTG+AGG + chr5.2:74443229-74443248 None:intergenic 55.0%
GGAGGATTGCCCTTCTCCAA+TGG + chr5.2:74442629-74442648 None:intergenic 55.0%
GGCAAGGCAGTCTCAAGAAC+AGG - chr5.2:74442250-74442269 MS.gene016863:CDS 55.0%
GGTGGAGGGCCTTGATCTTT+AGG + chr5.2:74442701-74442720 None:intergenic 55.0%
GGTGTGTGGAGTTGGACCTA+TGG + chr5.2:74442525-74442544 None:intergenic 55.0%
TATTGCCCCCCGTTATCCTC+TGG - chr5.2:74442929-74442948 MS.gene016863:CDS 55.0%
TCATCCTCGACCACCGAATC+TGG + chr5.2:74442113-74442132 None:intergenic 55.0%
TCCAATGGGAAACGCCTCTG+AGG + chr5.2:74442614-74442633 None:intergenic 55.0%
TTGTCAGATGCTCCGGTCAC+CGG + chr5.2:74442392-74442411 None:intergenic 55.0%
! AATGGGAAACGCCTCTGAGG+AGG + chr5.2:74442611-74442630 None:intergenic 55.0%
! GAGGCGTTTCCCATTGGAGA+AGG - chr5.2:74442616-74442635 MS.gene016863:CDS 55.0%
! GGGTTTGGAGTTTCGGAGGA+CGG - chr5.2:74443451-74443470 MS.gene016863:CDS 55.0%
!! TCCTCAGAGGCGTTTCCCAT+TGG - chr5.2:74442610-74442629 MS.gene016863:CDS 55.0%
!!! GGTCACCGGTTTTCCCTTCT+CGG + chr5.2:74442378-74442397 None:intergenic 55.0%
!!! GTCACCGGTTTTCCCTTCTC+GGG + chr5.2:74442377-74442396 None:intergenic 55.0%
AGCACTGCGATCCTCCTCAG+AGG - chr5.2:74442597-74442616 MS.gene016863:CDS 60.0%
AGCTTGAGCGGAGGATGTGG+AGG - chr5.2:74442162-74442181 MS.gene016863:CDS 60.0%
AGGGCAATCCTCCACCATGG+TGG - chr5.2:74442636-74442655 MS.gene016863:CDS 60.0%
CAACCGGGACTGAAGACTGG+TGG - chr5.2:74442660-74442679 MS.gene016863:CDS 60.0%
CACCAGTCTTCAGTCCCGGT+TGG + chr5.2:74442662-74442681 None:intergenic 60.0%
CTCGACCACCGAATCTGGCT+CGG + chr5.2:74442108-74442127 None:intergenic 60.0%
GAAGACTGGTGGCCCCAGAT+CGG - chr5.2:74442671-74442690 MS.gene016863:CDS 60.0%
GCAAACCGAGCCAGATTCGG+TGG - chr5.2:74442100-74442119 MS.gene016863:CDS 60.0%
GCTTGAGCGGAGGATGTGGA+GGG - chr5.2:74442163-74442182 MS.gene016863:CDS 60.0%
GGCAGTCTCAAGAACAGGCG+AGG - chr5.2:74442255-74442274 MS.gene016863:CDS 60.0%
! CAGCCAAGGAAAGCGCAACC+TGG - chr5.2:74442855-74442874 MS.gene016863:CDS 60.0%
! CCTCCACCAGAGGATAACGG+GGG + chr5.2:74442938-74442957 None:intergenic 60.0%
!! CTCCACCAGAGGATAACGGG+GGG + chr5.2:74442937-74442956 None:intergenic 60.0%
CCCCCGTTATCCTCTGGTGG+AGG - chr5.2:74442935-74442954 MS.gene016863:CDS 65.0%
CCTCCACCATGGTGGCCAAC+CGG - chr5.2:74442644-74442663 MS.gene016863:CDS 65.0%
CTCCACCATGGTGGCCAACC+GGG - chr5.2:74442645-74442664 MS.gene016863:CDS 65.0%
GGCCAACCGGGACTGAAGAC+TGG - chr5.2:74442657-74442676 MS.gene016863:CDS 65.0%
GGGCCACCAGTCTTCAGTCC+CGG + chr5.2:74442666-74442685 None:intergenic 65.0%
TGCCCCCCGTTATCCTCTGG+TGG - chr5.2:74442932-74442951 MS.gene016863:CDS 65.0%
! TCAGTCCCGGTTGGCCACCA+TGG + chr5.2:74442653-74442672 None:intergenic 65.0%
!! CGAGCCAGATTCGGTGGTCG+AGG - chr5.2:74442106-74442125 MS.gene016863:CDS 65.0%
! CCGGTTGGCCACCATGGTGG+AGG + chr5.2:74442647-74442666 None:intergenic 70.0%
! GTCCCGGTTGGCCACCATGG+TGG + chr5.2:74442650-74442669 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 74442014 74443891 74442014 ID=MS.gene016863
chr5.2 mRNA 74442014 74443891 74442014 ID=MS.gene016863.t1;Parent=MS.gene016863
chr5.2 exon 74442014 74443891 74442014 ID=MS.gene016863.t1.exon1;Parent=MS.gene016863.t1
chr5.2 CDS 74442014 74443891 74442014 ID=cds.MS.gene016863.t1;Parent=MS.gene016863.t1
Gene Sequence

>MS.gene016863

ATGATGATGTTTGAGGACATGGGATTTTGTGGTGATTTGGATGTGTTTTGTGGTACACTTGGGGAAGGGGATATTTCTTCTGTCAGGCAAACCGAGCCAGATTCGGTGGTCGAGGATGATTATAGTGATGAAGAAATGGATGTGGATGAGCTTGAGCGGAGGATGTGGAGGGACAAAATGCGTCTCAAGCGACTGAAAGAACAAACCAAGGCTAAAGAAGGAATTGATGCTGCAAAGGCAAGGCAGTCTCAAGAACAGGCGAGGAGGAAAAAGATGTCAAGAGCTCAAGATGGAATATTGAAGTACATGCTGAAAATGATGGAGGTTTGTAAGGCACAAGGCTTTGTTTATGGGATAATTCCCGAGAAGGGAAAACCGGTGACCGGAGCATCTGACAATCTTCGTGAATGGTGGAAGGATAAGGTTCGGTTCGATAGGAATGGTCCTGCTGCCATATCCAAGTATCAAGCAGATAACGCAATTCCAGGAAAGAATGATGGATGCAATTCCATAGGTCCAACTCCACACACCTTGCAAGAATTACAGGACACAACCTTGGGTTCTCTCTTATCAGCCCTTATGCAGCACTGCGATCCTCCTCAGAGGCGTTTCCCATTGGAGAAGGGCAATCCTCCACCATGGTGGCCAACCGGGACTGAAGACTGGTGGCCCCAGATCGGTTTGCCTAAAGATCAAGGCCCTCCACCATACAAGAAACCTCATGACTTGAAAAAAGCATGGAAAGTTGGTGTTCTAACTGCTGTTATCAAGCATATGTCTCCTGATATAGCCAAGATTCGCAAGCTCGTGAGGCAGTCCAAATGCCTTCAAGATAAAATGACAGCCAAGGAAAGCGCAACCTGGCTTGCCATCATCAATCAAGAGGAATCCTTGGCTCGAGAACTATATCCAGATTATTGCCCCCCGTTATCCTCTGGTGGAGGTACTGGTTCTATGGTCATCAACGATTGCAGTGAGTATGATGTTGATGGGGCTGACGGCGAGTCAAACTTTGATGTGGAGGACCGAAAACCCGAGAATCTTCATCCATCCAATCTTGGGATGGATAGAATGAGGGGAAGCTTTCCAGTGCAGCAACCTTCTCATCAAATCAAGGGAGAGGTTGTCACAAACTTGGATTTCATTCGGAAGAGGAAGATCTCTAACGACTTCAACATGATGATGGAACCGAAAATGTACACATGCGAGCATCCTCAATGCGCTTACAGCGAAGCTCGCCTTGCCTTTCAAGATAGGTCTTCCAGGGACAATCATCAATTGAATTGTCCACATAGAAACAGAAACAGTCCTGCAGGTTATGGCAACCCTAATTTTCATGCTACCGAGGTTAAGCCAGTTATTTTCCCACAAAGCTTTGTTCAACCTAATTCTACAGTTCAGCCTGCTAGTTTAGTTCCACCTTCATTCGATTTAACTGGGTTTGGAGTTTCGGAGGACGGCCAGAAAATGATCAGCGACCTTATGTCAGGCTATGATACACATGTTATAGGAAACAACAATGCAAGTTCCACCAATTGTGTAGTTATTGAAAATCAAAACCTTTCTCAGCCCATCATTCAGCAACAACAAAACCTTTCTCAGCCCATCATTCAGCAACAACAGGACAATTTCTTTTTGAATCAAGGAATGGTGATGGAGGCAAACTTTTTTACTCGCGAGGAAAATCAGTTTGACCGGTTCAAGGCCATGAACTCTCCTTTTGAAACCAACCTCAACAACAACAATAATATGCATCCCATGTATGGTTCTTCATGTGATTTGGCATCCTTTGATTTTAAGGAGGATCTACAACTACAAGGAGGAGTAGGAATGGATGCACTTTACAAACAACAAGATGTTTCAATATGGAACTACTGA
Protein sequence

>MS.gene016863.t1

MMMFEDMGFCGDLDVFCGTLGEGDISSVRQTEPDSVVEDDYSDEEMDVDELERRMWRDKMRLKRLKEQTKAKEGIDAAKARQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAISKYQADNAIPGKNDGCNSIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGNPPPWWPTGTEDWWPQIGLPKDQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEESLARELYPDYCPPLSSGGGTGSMVINDCSEYDVDGADGESNFDVEDRKPENLHPSNLGMDRMRGSFPVQQPSHQIKGEVVTNLDFIRKRKISNDFNMMMEPKMYTCEHPQCAYSEARLAFQDRSSRDNHQLNCPHRNRNSPAGYGNPNFHATEVKPVIFPQSFVQPNSTVQPASLVPPSFDLTGFGVSEDGQKMISDLMSGYDTHVIGNNNASSTNCVVIENQNLSQPIIQQQQNLSQPIIQQQQDNFFLNQGMVMEANFFTREENQFDRFKAMNSPFETNLNNNNNMHPMYGSSCDLASFDFKEDLQLQGGVGMDALYKQQDVSIWNY