AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene016908

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene016908.t1 MTR_5g088610 90.476 357 31 2 1 356 1 355 0.0 583
MS.gene016908.t1 MTR_1g085770 62.116 293 85 9 1 273 1 287 2.01e-104 309
MS.gene016908.t1 MTR_5g062790 53.750 320 114 10 1 302 1 304 5.20e-92 278
MS.gene016908.t1 MTR_4g128190 52.431 288 75 7 1 276 1 238 4.35e-86 260
MS.gene016908.t1 MTR_5g088640 50.974 308 77 9 12 290 13 275 3.79e-83 254
MS.gene016908.t1 MTR_5g088080 54.779 272 69 6 12 268 13 245 4.42e-83 253
MS.gene016908.t1 MTR_5g088150 54.779 272 69 6 12 268 13 245 4.42e-83 253
MS.gene016908.t1 MTR_5g488210 54.779 272 69 6 12 268 13 245 4.42e-83 253
MS.gene016908.t1 MTR_5g488170 54.826 259 67 5 12 259 13 232 4.71e-81 247
MS.gene016908.t1 MTR_1g085880 68.718 195 51 5 1 186 1 194 5.58e-75 230
MS.gene016908.t1 MTR_6g013135 40.392 255 98 7 96 305 148 393 1.69e-41 149
MS.gene016908.t1 MTR_8g042410 42.683 164 85 4 11 167 37 198 6.67e-35 134
MS.gene016908.t1 MTR_1g083630 43.316 187 83 4 11 175 12 197 7.84e-35 135
MS.gene016908.t1 MTR_3g052430 53.636 110 50 1 11 120 41 149 8.56e-34 131
MS.gene016908.t1 MTR_4g091490 50.000 124 60 2 8 130 10 132 1.15e-33 128
MS.gene016908.t1 MTR_1g021230 48.387 124 63 1 11 134 57 179 1.30e-33 129
MS.gene016908.t1 MTR_3g011610 44.203 138 73 3 7 142 31 166 2.57e-33 129
MS.gene016908.t1 MTR_3g052450 52.727 110 51 1 11 120 40 148 4.96e-33 129
MS.gene016908.t1 MTR_2g011660 52.586 116 53 2 8 122 10 124 1.25e-32 125
MS.gene016908.t1 MTR_2g089620 50.000 122 59 2 10 130 11 131 2.14e-32 124
MS.gene016908.t1 MTR_2g088170 52.174 115 54 1 10 124 28 141 2.44e-32 126
MS.gene016908.t1 MTR_7g076740 51.724 116 53 3 9 122 10 124 1.52e-31 121
MS.gene016908.t1 MTR_1g100653 46.847 111 58 1 10 120 11 120 2.04e-31 120
MS.gene016908.t1 MTR_5g007370 41.477 176 89 5 10 173 11 184 6.55e-31 119
MS.gene016908.t1 MTR_5g029840 51.754 114 53 2 10 122 11 123 6.66e-31 120
MS.gene016908.t1 MTR_1g043080 49.533 107 53 1 9 115 10 115 7.02e-31 118
MS.gene016908.t1 MTR_1g017000 39.634 164 95 3 11 171 12 174 9.81e-31 117
MS.gene016908.t1 MTR_4g478180 41.463 164 88 4 10 167 12 173 1.21e-30 119
MS.gene016908.t1 MTR_7g115650 48.571 105 53 1 10 114 11 114 3.91e-30 114
MS.gene016908.t1 MTR_1g076150 50.476 105 51 1 10 114 11 114 4.32e-30 116
MS.gene016908.t1 MTR_3g461490 48.246 114 57 2 11 123 12 124 5.24e-30 117
MS.gene016908.t1 MTR_0008s0280 50.000 108 53 1 10 117 11 117 5.42e-30 115
MS.gene016908.t1 MTR_3g077110 45.038 131 65 3 4 128 5 134 6.17e-30 117
MS.gene016908.t1 MTR_1g062940 51.429 105 50 1 11 115 6 109 7.50e-30 114
MS.gene016908.t1 MTR_1g043050 50.000 106 52 1 9 114 10 114 8.66e-30 115
MS.gene016908.t1 MTR_6g006030 45.763 118 63 1 11 128 14 130 9.16e-30 114
MS.gene016908.t1 MTR_7g087130 41.722 151 79 4 10 160 11 152 1.12e-29 117
MS.gene016908.t1 MTR_0008s0470 39.264 163 87 5 10 172 12 162 1.32e-29 115
MS.gene016908.t1 MTR_3g074520 47.826 115 58 2 10 123 11 124 1.39e-29 116
MS.gene016908.t1 MTR_0008s0390 47.619 105 54 1 10 114 12 115 2.03e-29 114
MS.gene016908.t1 MTR_1g085040 48.673 113 56 2 11 122 12 123 2.11e-29 116
MS.gene016908.t1 MTR_0251s0050 46.667 105 55 1 10 114 12 115 2.68e-29 114
MS.gene016908.t1 MTR_7g035075 45.872 109 58 1 11 119 14 121 5.28e-29 111
MS.gene016908.t1 MTR_7g110830 48.246 114 57 2 11 123 12 124 5.34e-29 115
MS.gene016908.t1 MTR_0140s0030 49.541 109 53 2 10 117 12 119 5.74e-29 114
MS.gene016908.t1 MTR_0489s0020 49.541 109 53 2 10 117 12 119 5.74e-29 114
MS.gene016908.t1 MTR_8g020490 50.000 104 47 2 7 110 8 106 6.62e-29 112
MS.gene016908.t1 MTR_1g017140 42.857 154 72 4 11 158 12 155 8.61e-29 114
MS.gene016908.t1 MTR_2g064160 44.068 118 64 2 11 127 11 127 9.61e-29 114
MS.gene016908.t1 MTR_1g112760 45.378 119 63 2 5 122 7 124 9.73e-29 111
MS.gene016908.t1 MTR_6g012180 49.020 102 51 1 9 110 10 110 1.14e-28 113
MS.gene016908.t1 MTR_3g039990 47.706 109 56 1 10 118 12 119 1.18e-28 113
MS.gene016908.t1 MTR_6g055910 48.148 108 55 1 12 119 15 121 1.38e-28 112
MS.gene016908.t1 MTR_7g010210 46.789 109 57 1 10 118 11 118 1.51e-28 112
MS.gene016908.t1 MTR_7g011170 46.957 115 59 2 10 123 11 124 1.73e-28 113
MS.gene016908.t1 MTR_4g082290 43.066 137 75 3 10 145 11 145 1.82e-28 114
MS.gene016908.t1 MTR_7g010210 46.789 109 57 1 10 118 11 118 2.07e-28 113
MS.gene016908.t1 MTR_2g089450 47.619 105 54 1 10 114 11 114 2.29e-28 111
MS.gene016908.t1 MTR_1g085640 47.788 113 57 2 11 122 12 123 2.48e-28 114
MS.gene016908.t1 MTR_1g086530 43.089 123 68 2 11 133 33 153 2.98e-28 111
MS.gene016908.t1 MTR_4g105130 44.538 119 64 2 5 122 6 123 5.98e-28 112
MS.gene016908.t1 MTR_5g079670 37.654 162 93 4 7 167 11 165 6.08e-28 108
MS.gene016908.t1 MTR_7g111290 52.525 99 46 1 11 109 12 109 6.31e-28 112
MS.gene016908.t1 MTR_8g095390 49.550 111 54 2 13 122 14 123 7.71e-28 111
MS.gene016908.t1 MTR_4g097570 43.182 132 64 3 11 132 12 142 8.32e-28 110
MS.gene016908.t1 MTR_8g031360 48.598 107 53 2 10 115 12 117 9.17e-28 110
MS.gene016908.t1 MTR_7g096930 47.619 105 54 1 10 114 11 114 9.57e-28 110
MS.gene016908.t1 MTR_4g065017 48.182 110 56 1 8 117 14 122 1.08e-27 111
MS.gene016908.t1 MTR_5g014990 50.476 105 50 2 11 114 12 115 1.23e-27 110
MS.gene016908.t1 MTR_2g097910 47.664 107 55 1 11 117 20 125 1.38e-27 110
MS.gene016908.t1 MTR_4g029540 49.074 108 53 2 11 117 10 116 1.44e-27 110
MS.gene016908.t1 MTR_1g100667 46.789 109 57 1 12 120 14 121 1.47e-27 109
MS.gene016908.t1 MTR_6g012690 45.217 115 61 2 10 123 11 124 2.37e-27 110
MS.gene016908.t1 MTR_3g103570 49.524 105 51 2 11 114 12 115 2.48e-27 110
MS.gene016908.t1 MTR_4g121460 47.619 105 54 1 10 114 11 114 2.81e-27 110
MS.gene016908.t1 MTR_2g096380 44.828 116 60 2 7 119 2 116 3.54e-27 107
MS.gene016908.t1 MTR_1g110460 42.593 108 61 1 11 118 26 132 3.75e-27 109
MS.gene016908.t1 MTR_4g485530 44.262 122 64 3 13 133 14 132 4.47e-27 106
MS.gene016908.t1 MTR_2g095520 52.475 101 46 2 11 110 12 111 4.73e-27 109
MS.gene016908.t1 MTR_8g017440 44.094 127 67 4 1 124 1 126 5.26e-27 109
MS.gene016908.t1 MTR_4g082230 41.912 136 76 3 11 145 12 145 5.31e-27 110
MS.gene016908.t1 MTR_3g097450 47.748 111 56 2 13 122 14 123 5.97e-27 108
MS.gene016908.t1 MTR_3g083540 43.860 114 62 2 10 122 40 152 6.21e-27 108
MS.gene016908.t1 MTR_3g028740 47.321 112 57 2 7 117 17 127 6.26e-27 109
MS.gene016908.t1 MTR_4g063100 44.737 114 59 2 12 122 8 120 6.95e-27 107
MS.gene016908.t1 MTR_0063s0090 47.525 101 52 1 10 110 11 110 7.06e-27 106
MS.gene016908.t1 MTR_4g057635 50.476 105 50 2 11 114 12 115 7.90e-27 108
MS.gene016908.t1 MTR_4g073420 46.847 111 57 2 13 122 14 123 8.73e-27 107
MS.gene016908.t1 MTR_1g073170 46.226 106 56 1 12 117 21 125 8.74e-27 107
MS.gene016908.t1 MTR_8g006470 47.619 105 53 2 11 114 10 113 1.44e-26 107
MS.gene016908.t1 MTR_4g128670 50.495 101 48 2 11 110 12 111 1.45e-26 108
MS.gene016908.t1 MTR_7g102110 49.524 105 51 2 11 114 12 115 1.46e-26 107
MS.gene016908.t1 MTR_2g089420 45.794 107 57 1 8 114 8 113 1.74e-26 109
MS.gene016908.t1 MTR_6g090405 46.364 110 57 2 11 119 12 120 2.19e-26 105
MS.gene016908.t1 MTR_4g100720 46.000 100 53 1 11 110 13 111 2.23e-26 103
MS.gene016908.t1 MTR_6g009430 45.614 114 60 2 11 123 12 124 2.46e-26 107
MS.gene016908.t1 MTR_5g078140 36.634 202 113 6 10 199 11 209 2.91e-26 107
MS.gene016908.t1 MTR_5g042030 47.368 114 58 2 10 122 6 118 3.23e-26 106
MS.gene016908.t1 MTR_4g097570 42.857 133 64 4 11 132 12 143 3.24e-26 106
MS.gene016908.t1 MTR_1g045610 44.643 112 58 2 12 123 22 129 5.39e-26 105
MS.gene016908.t1 MTR_2g099740 44.348 115 62 2 1 114 1 114 6.75e-26 107
MS.gene016908.t1 MTR_5g010020 47.000 100 52 1 11 110 12 110 6.89e-26 106
MS.gene016908.t1 MTR_3g065440 45.378 119 63 2 10 127 11 128 7.97e-26 105
MS.gene016908.t1 MTR_8g027345 44.037 109 60 1 10 118 11 118 1.02e-25 105
MS.gene016908.t1 MTR_8g017540 44.348 115 62 2 1 114 47 160 1.20e-25 106
MS.gene016908.t1 MTR_4g125520 46.535 101 53 1 10 110 11 110 1.38e-25 105
MS.gene016908.t1 MTR_8g098860 44.954 109 55 2 11 115 12 119 2.05e-25 104
MS.gene016908.t1 MTR_0247s0040 44.248 113 58 2 1 113 1 108 2.19e-25 101
MS.gene016908.t1 MTR_1g086510 42.202 109 62 1 10 118 20 127 2.41e-25 103
MS.gene016908.t1 MTR_2g034790 37.179 156 92 3 10 164 11 161 2.46e-25 104
MS.gene016908.t1 MTR_2g067420 50.000 100 49 1 11 110 14 112 2.96e-25 104
MS.gene016908.t1 MTR_4g102380 45.217 115 61 2 10 123 11 124 3.68e-25 103
MS.gene016908.t1 MTR_5g078910 44.340 106 58 1 9 114 5 109 4.00e-25 103
MS.gene016908.t1 MTR_8g017500 41.935 124 69 3 1 122 1 123 4.06e-25 104
MS.gene016908.t1 MTR_5g016510 50.485 103 48 3 13 114 5 105 5.98e-25 103
MS.gene016908.t1 MTR_8g017340 45.872 109 53 3 7 114 12 115 1.06e-24 105
MS.gene016908.t1 MTR_8g017390 44.954 109 54 3 7 114 12 115 1.26e-24 104
MS.gene016908.t1 MTR_5g079290 41.667 108 62 1 7 114 13 119 1.59e-24 101
MS.gene016908.t1 MTR_5g078860 45.283 106 57 1 9 114 5 109 1.66e-24 102
MS.gene016908.t1 MTR_7g117730 42.574 101 57 1 10 110 11 110 1.86e-24 100
MS.gene016908.t1 MTR_8g017350 43.478 115 59 3 1 114 6 115 2.63e-24 104
MS.gene016908.t1 MTR_0193s0090 41.176 119 65 2 1 119 1 114 4.18e-24 98.6
MS.gene016908.t1 MTR_5g079220 42.056 107 61 1 8 114 18 123 8.50e-24 99.4
MS.gene016908.t1 MTR_5g079120 42.453 106 60 1 9 114 59 163 8.84e-24 100
MS.gene016908.t1 MTR_3g101290 44.037 109 59 2 13 121 37 143 9.07e-24 98.2
MS.gene016908.t1 MTR_8g060940 43.564 101 56 1 10 110 6 105 9.81e-24 98.6
MS.gene016908.t1 MTR_4g019370 44.444 108 58 2 13 120 38 143 1.14e-23 100
MS.gene016908.t1 MTR_7g109320 47.368 114 57 2 10 121 11 123 1.15e-23 100
MS.gene016908.t1 MTR_5g078950 40.952 105 61 1 9 113 5 108 2.44e-23 97.8
MS.gene016908.t1 MTR_0197s0010 37.931 145 80 3 16 159 6 141 3.78e-23 96.7
MS.gene016908.t1 MTR_2g033170 42.593 108 61 1 11 118 24 130 4.41e-23 98.6
MS.gene016908.t1 MTR_6g015455 49.485 97 47 2 13 109 5 99 4.43e-23 101
MS.gene016908.t1 MTR_4g094982 41.429 140 73 4 13 145 5 142 5.86e-23 97.1
MS.gene016908.t1 MTR_5g078800 43.396 106 59 1 9 114 5 109 6.16e-23 97.1
MS.gene016908.t1 MTR_3g045430 33.735 166 75 4 8 172 10 141 6.79e-23 97.4
MS.gene016908.t1 MTR_3g077650 42.105 114 62 3 13 124 181 292 1.53e-22 98.6
MS.gene016908.t1 MTR_0001s0360 40.566 106 62 1 9 114 5 109 3.86e-22 94.4
MS.gene016908.t1 MTR_5g010650 47.059 102 52 2 8 109 105 204 1.03e-21 96.3
MS.gene016908.t1 MTR_7g017260 42.718 103 56 2 10 110 24 125 1.35e-21 93.2
MS.gene016908.t1 MTR_5g078930 41.414 99 57 1 12 110 10 107 2.49e-21 91.3
MS.gene016908.t1 MTR_6g055910 51.316 76 36 1 44 119 18 92 3.46e-21 91.7
MS.gene016908.t1 MTR_5g049190 42.308 104 58 2 11 114 17 118 7.08e-21 90.5
MS.gene016908.t1 MTR_7g035350 46.535 101 52 2 13 113 225 323 8.03e-21 93.6
MS.gene016908.t1 MTR_5g070020 40.741 108 62 2 11 118 120 225 1.00e-20 92.4
MS.gene016908.t1 MTR_4g105660 38.400 125 73 4 11 133 178 300 1.17e-20 92.8
MS.gene016908.t1 MTR_6g027340 36.364 121 75 2 13 133 16 134 1.18e-20 89.0
MS.gene016908.t1 MTR_4g123040 40.741 108 63 1 11 118 24 130 2.77e-20 90.5
MS.gene016908.t1 MTR_5g082910 45.918 98 51 2 13 110 19 114 2.79e-20 90.1
MS.gene016908.t1 MTR_2g096380 51.250 80 35 2 43 119 19 97 3.64e-20 88.2
MS.gene016908.t1 MTR_6g027360 35.714 126 79 2 8 133 73 196 3.88e-20 89.7
MS.gene016908.t1 MTR_7g061550 41.121 107 60 2 13 117 7 112 3.98e-20 90.5
MS.gene016908.t1 MTR_3g463400 42.202 109 59 3 11 118 131 236 4.07e-20 91.7
MS.gene016908.t1 MTR_7g451170 43.689 103 56 2 13 115 191 291 5.26e-20 90.9
MS.gene016908.t1 MTR_7g037260 40.741 108 62 2 11 118 143 248 5.63e-20 90.1
MS.gene016908.t1 MTR_6g074860 41.176 102 55 3 16 114 7 106 1.07e-19 87.4
MS.gene016908.t1 MTR_4g063100 48.193 83 39 2 43 122 10 91 1.88e-19 86.3
MS.gene016908.t1 MTR_1g026870 37.963 108 65 2 7 114 79 184 6.14e-19 89.0
MS.gene016908.t1 MTR_1g026870 34.286 105 68 1 5 109 25 128 1.81e-13 72.0
MS.gene016908.t1 MTR_4g088015 39.815 108 63 2 11 118 219 324 1.24e-18 87.0
MS.gene016908.t1 MTR_3g089045 32.984 191 102 6 2 182 5 179 1.44e-18 85.1
MS.gene016908.t1 MTR_4g082040 38.261 115 66 3 5 116 97 209 1.89e-18 86.3
MS.gene016908.t1 MTR_7g111290 53.731 67 30 1 43 109 2 67 2.34e-18 85.1
MS.gene016908.t1 MTR_7g037130 41.748 103 58 2 11 113 143 243 6.09e-18 84.3
MS.gene016908.t1 MTR_1g057980 41.748 103 58 2 11 113 78 178 1.29e-17 82.4
MS.gene016908.t1 MTR_5g041570 36.842 114 67 3 6 116 127 238 1.80e-17 83.6
MS.gene016908.t1 MTR_7g450950 39.604 101 59 2 13 113 157 255 2.06e-17 82.4
MS.gene016908.t1 MTR_7g061330 39.815 108 63 2 7 114 107 212 3.13e-17 83.2
MS.gene016908.t1 MTR_7g061330 36.082 97 53 3 16 108 64 155 3.94e-12 67.8
MS.gene016908.t1 MTR_7g461410 39.815 108 63 2 7 114 107 212 3.13e-17 83.2
MS.gene016908.t1 MTR_7g461410 36.082 97 53 3 16 108 64 155 3.94e-12 67.8
MS.gene016908.t1 MTR_7g061330 39.815 108 63 2 7 114 71 176 4.04e-17 82.8
MS.gene016908.t1 MTR_7g061330 36.000 100 55 3 13 108 25 119 4.90e-12 67.4
MS.gene016908.t1 MTR_7g086960 38.596 114 67 3 6 118 82 193 8.00e-17 80.9
MS.gene016908.t1 MTR_8g468380 31.875 160 98 5 16 175 25 173 1.95e-16 80.5
MS.gene016908.t1 MTR_5g007300 42.353 85 49 0 1 85 54 138 5.26e-16 74.3
MS.gene016908.t1 MTR_6g027370 33.898 118 76 2 16 133 102 217 5.35e-15 75.5
MS.gene016908.t1 MTR_5g038910 36.607 112 69 2 16 127 29 138 2.35e-14 73.9
MS.gene016908.t1 MTR_5g038910 38.235 102 61 2 16 117 29 128 2.43e-14 74.3
MS.gene016908.t1 MTR_0023s0210 41.096 73 43 0 10 82 6 78 8.11e-14 66.6
MS.gene016908.t1 MTR_3g110028 35.577 104 66 1 5 108 25 127 1.35e-13 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene016908.t1 AT2G26950 49.286 140 70 1 4 143 9 147 3.62e-40 146
MS.gene016908.t1 AT2G32460 46.212 132 65 2 7 133 2 132 1.16e-36 138
MS.gene016908.t1 AT2G32460 46.923 130 63 2 9 133 16 144 3.51e-36 137
MS.gene016908.t1 AT3G11440 48.413 126 64 1 6 131 36 160 1.76e-35 135
MS.gene016908.t1 AT3G11440 48.413 126 64 1 6 131 36 160 4.49e-35 135
MS.gene016908.t1 AT3G11440 48.413 126 64 1 6 131 36 160 4.49e-35 135
MS.gene016908.t1 AT3G11440 48.413 126 64 1 6 131 36 160 4.49e-35 135
MS.gene016908.t1 AT2G26960 47.934 121 62 1 7 127 16 135 1.19e-34 132
MS.gene016908.t1 AT5G55020 51.754 114 54 1 11 124 26 138 1.20e-34 133
MS.gene016908.t1 AT5G06100 48.760 121 61 1 10 130 31 150 1.98e-34 132
MS.gene016908.t1 AT4G26930 49.123 114 57 1 11 124 19 131 3.44e-34 130
MS.gene016908.t1 AT5G06100 48.760 121 61 1 10 130 31 150 3.78e-34 132
MS.gene016908.t1 AT5G06100 48.760 121 61 1 10 130 31 150 3.78e-34 132
MS.gene016908.t1 AT5G06100 48.760 121 61 1 10 130 31 150 3.78e-34 132
MS.gene016908.t1 AT5G06100 48.760 121 61 1 10 130 31 150 3.78e-34 132
MS.gene016908.t1 AT4G21440 52.459 122 56 2 10 130 11 131 1.10e-33 128
MS.gene016908.t1 AT1G57560 36.364 242 137 7 11 240 12 248 6.95e-32 122
MS.gene016908.t1 AT4G01680 43.885 139 76 2 11 148 12 149 2.16e-31 119
MS.gene016908.t1 AT4G05100 51.754 114 53 2 10 122 12 124 1.29e-30 119
MS.gene016908.t1 AT4G01680 44.203 138 75 2 11 147 12 148 1.66e-30 119
MS.gene016908.t1 AT4G28110 50.877 114 54 2 10 122 11 123 3.51e-30 117
MS.gene016908.t1 AT5G65230 47.967 123 62 2 10 131 11 132 3.83e-30 117
MS.gene016908.t1 AT5G10280 49.565 115 56 2 10 123 11 124 4.09e-30 118
MS.gene016908.t1 AT5G26660 45.968 124 65 2 11 133 12 134 5.06e-30 118
MS.gene016908.t1 AT1G57560 50.000 114 55 2 11 123 12 124 8.99e-30 115
MS.gene016908.t1 AT5G54230 48.673 113 56 2 11 122 12 123 1.17e-29 116
MS.gene016908.t1 AT3G01530 38.690 168 94 3 11 171 25 190 1.24e-29 113
MS.gene016908.t1 AT5G56110 46.491 114 59 2 11 123 12 124 2.02e-29 115
MS.gene016908.t1 AT1G74080 45.528 123 65 2 9 130 10 131 2.16e-29 115
MS.gene016908.t1 AT1G08810 49.524 105 52 1 10 114 11 114 2.45e-29 114
MS.gene016908.t1 AT5G40330 37.500 160 92 3 12 166 13 169 3.14e-29 112
MS.gene016908.t1 AT3G61250 28.136 295 174 10 10 290 11 281 3.92e-29 114
MS.gene016908.t1 AT3G30210 33.333 195 110 4 10 188 26 216 4.00e-29 114
MS.gene016908.t1 AT4G37780 50.000 106 51 2 10 114 11 115 6.50e-29 114
MS.gene016908.t1 AT1G18710 41.026 117 67 2 10 125 11 126 6.99e-29 113
MS.gene016908.t1 AT5G14750 49.495 99 49 1 12 110 17 114 7.45e-29 111
MS.gene016908.t1 AT2G31180 36.275 204 98 6 10 189 11 206 8.01e-29 112
MS.gene016908.t1 AT5G16770 49.524 105 52 1 10 114 11 114 8.35e-29 114
MS.gene016908.t1 AT5G16770 49.524 105 52 1 10 114 11 114 8.35e-29 114
MS.gene016908.t1 AT3G23250 37.500 176 100 4 10 184 11 177 9.80e-29 113
MS.gene016908.t1 AT3G47600 46.789 109 57 1 10 118 11 118 1.00e-28 114
MS.gene016908.t1 AT1G09540 49.558 113 55 2 11 122 12 123 1.12e-28 114
MS.gene016908.t1 AT1G74430 42.609 115 64 2 10 123 11 124 1.34e-28 112
MS.gene016908.t1 AT3G12720 44.915 118 63 2 11 127 22 138 1.35e-28 113
MS.gene016908.t1 AT5G16770 49.524 105 52 1 10 114 11 114 1.49e-28 114
MS.gene016908.t1 AT5G16770 49.524 105 52 1 10 114 11 114 1.49e-28 114
MS.gene016908.t1 AT5G59780 46.218 119 60 2 7 122 4 121 1.79e-28 111
MS.gene016908.t1 AT1G74650 48.077 104 53 1 11 114 12 114 1.98e-28 113
MS.gene016908.t1 AT4G38620 41.549 142 81 2 13 153 14 154 2.01e-28 112
MS.gene016908.t1 AT1G18570 46.491 114 59 2 10 122 12 124 2.11e-28 113
MS.gene016908.t1 AT3G27810 46.296 108 57 1 11 118 20 126 2.30e-28 110
MS.gene016908.t1 AT5G52600 37.736 159 81 5 11 152 12 169 2.34e-28 109
MS.gene016908.t1 AT1G22640 38.462 169 100 3 11 178 12 177 2.63e-28 111
MS.gene016908.t1 AT5G61420 45.299 117 62 2 7 122 8 123 2.93e-28 113
MS.gene016908.t1 AT3G27920 37.654 162 95 2 8 164 11 171 3.03e-28 110
MS.gene016908.t1 AT3G02940 49.524 105 52 1 10 114 11 114 3.10e-28 112
MS.gene016908.t1 AT3G12820 49.038 104 52 1 11 114 14 116 3.22e-28 110
MS.gene016908.t1 AT1G16490 44.056 143 73 4 11 153 14 149 3.52e-28 111
MS.gene016908.t1 AT5G62470 46.789 109 57 1 10 118 11 118 3.64e-28 113
MS.gene016908.t1 AT4G17785 49.533 107 53 1 8 114 10 115 3.76e-28 112
MS.gene016908.t1 AT3G46130 47.414 116 57 2 10 122 8 122 3.77e-28 110
MS.gene016908.t1 AT3G49690 52.381 105 48 2 11 114 12 115 4.13e-28 112
MS.gene016908.t1 AT4G17785 49.533 107 53 1 8 114 10 115 4.17e-28 113
MS.gene016908.t1 AT5G07690 47.222 108 56 1 7 114 8 114 4.19e-28 112
MS.gene016908.t1 AT3G02940 49.524 105 52 1 10 114 11 114 5.10e-28 112
MS.gene016908.t1 AT3G02940 49.524 105 52 1 10 114 11 114 5.10e-28 112
MS.gene016908.t1 AT1G56160 48.214 112 53 2 11 122 14 120 5.54e-28 111
MS.gene016908.t1 AT3G28910 48.571 105 53 1 10 114 11 114 5.56e-28 112
MS.gene016908.t1 AT3G01140 43.182 132 71 3 10 140 54 182 6.45e-28 113
MS.gene016908.t1 AT5G40350 45.714 105 56 1 11 115 17 120 6.53e-28 108
MS.gene016908.t1 AT3G08500 47.664 107 55 1 11 117 30 135 7.65e-28 112
MS.gene016908.t1 AT3G01140 46.087 115 60 2 10 123 11 124 7.90e-28 112
MS.gene016908.t1 AT5G15310 46.087 115 60 2 10 123 11 124 8.43e-28 109
MS.gene016908.t1 AT5G12870 47.273 110 57 1 9 118 16 124 1.08e-27 110
MS.gene016908.t1 AT5G07700 47.222 108 56 1 7 114 8 114 1.09e-27 111
MS.gene016908.t1 AT5G07700 47.222 108 56 1 7 114 8 114 1.09e-27 111
MS.gene016908.t1 AT5G15310 46.087 115 60 2 10 123 11 124 1.12e-27 111
MS.gene016908.t1 AT1G35515 47.788 113 57 2 11 122 12 123 1.32e-27 108
MS.gene016908.t1 AT5G15310 46.087 115 60 2 10 123 11 124 1.38e-27 110
MS.gene016908.t1 AT1G34670 47.826 115 58 2 10 123 11 124 1.55e-27 111
MS.gene016908.t1 AT1G06180 49.074 108 52 2 10 115 11 117 1.56e-27 108
MS.gene016908.t1 AT3G13540 44.737 114 61 2 10 122 22 134 1.62e-27 108
MS.gene016908.t1 AT3G53200 50.000 106 52 1 11 116 9 113 1.83e-27 108
MS.gene016908.t1 AT4G01680 40.667 150 75 3 11 147 12 160 2.98e-27 110
MS.gene016908.t1 AT4G13480 47.009 117 57 2 12 128 7 118 3.10e-27 108
MS.gene016908.t1 AT3G60460 43.478 115 63 2 1 114 1 114 6.48e-27 108
MS.gene016908.t1 AT1G79180 41.727 139 76 3 11 145 14 151 7.09e-27 108
MS.gene016908.t1 AT5G65790 51.429 105 49 2 11 114 12 115 7.75e-27 109
MS.gene016908.t1 AT5G62470 46.789 109 56 2 10 118 11 117 9.83e-27 108
MS.gene016908.t1 AT2G36890 44.444 117 63 2 11 126 12 127 1.20e-26 107
MS.gene016908.t1 AT3G13890 44.348 115 62 2 1 114 1 114 2.03e-26 108
MS.gene016908.t1 AT2G36890 44.444 117 63 2 11 126 53 168 2.23e-26 107
MS.gene016908.t1 AT1G48000 42.991 107 60 1 11 117 32 137 2.43e-26 105
MS.gene016908.t1 AT3G24310 44.144 111 61 1 7 117 14 123 2.53e-26 106
MS.gene016908.t1 AT2G47190 43.925 107 59 1 11 117 20 125 2.83e-26 106
MS.gene016908.t1 AT4G34990 45.946 111 58 2 13 122 14 123 3.16e-26 106
MS.gene016908.t1 AT3G28470 48.000 100 51 1 11 110 12 110 3.55e-26 107
MS.gene016908.t1 AT5G57620 49.524 105 51 2 11 114 12 115 3.97e-26 107
MS.gene016908.t1 AT5G60890 44.545 110 60 1 9 118 10 118 4.06e-26 106
MS.gene016908.t1 AT5G23000 49.524 105 51 2 11 114 12 115 4.99e-26 106
MS.gene016908.t1 AT2G16720 45.133 113 60 2 11 122 12 123 6.52e-26 105
MS.gene016908.t1 AT5G16600 46.957 115 59 2 10 123 11 124 8.31e-26 106
MS.gene016908.t1 AT1G68320 41.667 108 62 1 11 118 19 125 1.09e-25 105
MS.gene016908.t1 AT4G09460 45.946 111 58 2 13 122 14 123 1.20e-25 103
MS.gene016908.t1 AT1G66230 46.957 115 59 2 10 123 11 124 1.24e-25 104
MS.gene016908.t1 AT1G63910 47.115 104 54 1 11 114 12 114 1.97e-25 105
MS.gene016908.t1 AT1G25340 42.056 107 61 1 12 118 19 124 2.20e-25 103
MS.gene016908.t1 AT1G66370 43.363 113 62 2 9 120 6 117 2.84e-25 102
MS.gene016908.t1 AT3G62610 45.545 101 54 1 10 110 11 110 3.84e-25 104
MS.gene016908.t1 AT2G47460 46.535 101 53 1 10 110 11 110 4.23e-25 104
MS.gene016908.t1 AT5G14340 43.860 114 62 2 10 122 23 135 4.95e-25 102
MS.gene016908.t1 AT3G48920 46.602 103 54 1 12 114 19 120 5.05e-25 102
MS.gene016908.t1 AT3G50060 46.789 109 56 2 13 121 6 112 9.64e-25 102
MS.gene016908.t1 AT5G35550 45.192 104 56 1 11 114 14 116 1.16e-24 101
MS.gene016908.t1 AT5G62320 45.455 121 57 3 10 122 12 131 1.51e-24 100
MS.gene016908.t1 AT5G49330 42.609 115 61 2 10 124 11 120 2.27e-24 102
MS.gene016908.t1 AT4G22680 46.087 115 60 2 10 123 11 124 2.60e-24 100
MS.gene016908.t1 AT1G56650 38.129 139 76 3 4 133 1 138 3.14e-24 100
MS.gene016908.t1 AT5G52260 47.573 103 53 1 12 114 13 114 9.76e-24 99.4
MS.gene016908.t1 AT3G13890 41.129 124 62 3 1 114 1 123 1.47e-23 100
MS.gene016908.t1 AT1G66380 43.860 114 62 2 4 116 1 113 1.60e-23 95.1
MS.gene016908.t1 AT4G18770 37.956 137 81 3 11 145 215 349 2.21e-23 100
MS.gene016908.t1 AT4G25560 44.660 103 56 1 12 114 11 112 2.79e-23 98.2
MS.gene016908.t1 AT1G66390 42.982 114 63 2 4 116 1 113 6.61e-23 96.7
MS.gene016908.t1 AT3G06490 44.444 108 59 1 11 118 19 125 8.41e-23 97.8
MS.gene016908.t1 AT4G37260 45.161 124 64 4 13 134 13 134 1.61e-22 97.1
MS.gene016908.t1 AT5G67300 36.810 163 93 5 13 167 6 166 1.73e-22 96.7
MS.gene016908.t1 AT2G23290 48.544 103 50 3 13 114 13 113 2.68e-22 95.9
MS.gene016908.t1 AT3G27785 41.667 108 61 2 11 118 187 292 2.81e-22 97.8
MS.gene016908.t1 AT5G40360 33.951 162 96 4 11 163 156 315 3.12e-22 96.7
MS.gene016908.t1 AT1G25340 40.187 107 58 2 12 118 19 119 4.57e-22 94.7
MS.gene016908.t1 AT1G25340 40.187 107 58 2 12 118 19 119 7.13e-22 94.7
MS.gene016908.t1 AT4G12350 45.192 104 56 1 11 114 12 114 1.14e-21 94.0
MS.gene016908.t1 AT1G79180 34.302 172 75 4 11 145 14 184 1.27e-21 94.4
MS.gene016908.t1 AT5G49620 41.667 108 62 1 11 118 26 132 2.17e-21 93.6
MS.gene016908.t1 AT5G17800 37.500 144 84 4 1 140 80 221 3.76e-21 93.2
MS.gene016908.t1 AT2G39880 44.248 113 61 2 2 114 39 149 4.18e-21 93.6
MS.gene016908.t1 AT3G53200 57.534 73 30 1 44 116 9 80 4.88e-21 90.1
MS.gene016908.t1 AT5G26660 46.154 91 47 2 44 133 14 103 5.64e-21 92.4
MS.gene016908.t1 AT5G58850 44.954 109 56 3 8 115 100 205 2.25e-20 92.0
MS.gene016908.t1 AT3G46130 51.190 84 37 2 42 122 8 90 2.48e-20 89.0
MS.gene016908.t1 AT3G55730 44.118 102 55 2 13 114 56 155 4.73e-20 90.9
MS.gene016908.t1 AT5G59780 52.439 82 35 2 44 122 20 100 6.81e-20 87.4
MS.gene016908.t1 AT3G27810 50.667 75 36 1 44 118 4 77 9.59e-20 85.9
MS.gene016908.t1 AT3G46130 52.439 82 35 2 44 122 20 100 1.06e-19 87.4
MS.gene016908.t1 AT5G40350 50.000 74 36 1 42 115 3 75 1.06e-19 85.5
MS.gene016908.t1 AT1G17950 39.450 109 62 3 16 122 8 114 1.70e-19 87.0
MS.gene016908.t1 AT2G37630 42.991 107 58 2 13 117 4 109 2.02e-19 88.6
MS.gene016908.t1 AT5G49620 37.190 121 63 1 11 118 26 146 2.51e-19 87.8
MS.gene016908.t1 AT4G32730 39.815 108 63 2 7 114 81 186 2.55e-19 89.7
MS.gene016908.t1 AT4G32730 36.190 105 66 1 5 109 27 130 1.89e-14 75.1
MS.gene016908.t1 AT4G32730 39.815 108 63 2 7 114 81 186 2.62e-19 90.1
MS.gene016908.t1 AT4G32730 36.190 105 66 1 5 109 27 130 2.14e-14 75.1
MS.gene016908.t1 AT4G32730 39.815 108 63 2 7 114 81 186 2.62e-19 90.1
MS.gene016908.t1 AT4G32730 36.190 105 66 1 5 109 27 130 2.14e-14 75.1
MS.gene016908.t1 AT4G32730 39.815 108 63 2 7 114 81 186 2.62e-19 90.1
MS.gene016908.t1 AT4G32730 36.190 105 66 1 5 109 27 130 2.14e-14 75.1
MS.gene016908.t1 AT4G32730 39.815 108 63 2 7 114 81 186 2.62e-19 90.1
MS.gene016908.t1 AT4G32730 36.190 105 66 1 5 109 27 130 2.14e-14 75.1
MS.gene016908.t1 AT3G09230 40.777 103 59 2 13 115 55 155 5.29e-19 87.8
MS.gene016908.t1 AT3G12820 56.061 66 28 1 49 114 4 68 7.49e-19 84.0
MS.gene016908.t1 AT5G02320 39.815 108 63 2 7 114 121 226 9.41e-19 87.8
MS.gene016908.t1 AT5G02320 36.735 98 53 2 16 109 78 170 1.06e-13 72.4
MS.gene016908.t1 AT5G02320 39.815 108 63 2 7 114 121 226 9.41e-19 87.8
MS.gene016908.t1 AT5G02320 36.735 98 53 2 16 109 78 170 1.06e-13 72.4
MS.gene016908.t1 AT5G02320 39.815 108 63 2 7 114 61 166 1.14e-18 87.4
MS.gene016908.t1 AT5G02320 37.234 94 58 1 16 109 18 110 1.16e-13 72.4
MS.gene016908.t1 AT1G69560 38.596 114 61 4 2 112 100 207 1.15e-18 86.3
MS.gene016908.t1 AT1G69560 37.288 118 65 4 2 116 116 227 1.15e-18 86.3
MS.gene016908.t1 AT4G33450 37.383 107 62 3 11 114 17 121 1.41e-18 84.3
MS.gene016908.t1 AT5G11050 42.593 108 58 3 9 115 101 205 1.85e-18 86.7
MS.gene016908.t1 AT4G00540 38.583 127 69 4 4 127 94 214 2.04e-18 86.3
MS.gene016908.t1 AT4G00540 33.036 112 68 2 4 108 37 148 8.81e-11 63.2
MS.gene016908.t1 AT4G00540 36.000 150 82 5 4 150 92 230 2.60e-18 86.3
MS.gene016908.t1 AT2G25230 40.000 120 67 4 11 127 24 141 3.58e-18 83.2
MS.gene016908.t1 AT1G26780 39.252 107 60 3 11 114 96 200 6.01e-18 83.2
MS.gene016908.t1 AT1G26780 39.252 107 60 3 11 114 96 200 6.13e-18 84.3
MS.gene016908.t1 AT5G11510 35.185 108 68 2 7 114 75 180 1.11e-17 85.1
MS.gene016908.t1 AT5G11510 35.780 109 61 2 5 109 21 124 3.80e-14 74.3
MS.gene016908.t1 AT5G11510 35.185 108 68 2 7 114 75 180 1.13e-17 85.1
MS.gene016908.t1 AT5G11510 35.780 109 61 2 5 109 21 124 4.25e-14 73.9
MS.gene016908.t1 AT1G73410 41.964 112 57 4 16 122 9 117 1.17e-17 81.6
MS.gene016908.t1 AT1G73410 41.964 112 57 4 16 122 9 117 1.37e-17 80.5
MS.gene016908.t1 AT5G11510 35.185 108 68 2 7 114 75 180 1.38e-17 84.7
MS.gene016908.t1 AT5G11510 35.780 109 61 2 5 109 21 124 4.25e-14 74.3
MS.gene016908.t1 AT5G11510 35.185 108 68 2 7 114 75 180 1.38e-17 84.7
MS.gene016908.t1 AT5G11510 35.780 109 61 2 5 109 21 124 4.25e-14 74.3
MS.gene016908.t1 AT5G11510 35.185 108 68 2 7 114 75 180 1.38e-17 84.7
MS.gene016908.t1 AT5G11510 35.780 109 61 2 5 109 21 124 4.25e-14 74.3
MS.gene016908.t1 AT3G09370 39.815 108 63 2 7 114 129 234 1.93e-17 84.0
MS.gene016908.t1 AT3G09370 35.417 96 61 1 13 108 83 177 6.48e-12 67.0
MS.gene016908.t1 AT3G09370 39.815 108 63 2 7 114 124 229 2.42e-17 83.6
MS.gene016908.t1 AT3G09370 35.417 96 61 1 13 108 78 172 7.56e-12 66.6
MS.gene016908.t1 AT5G14750 44.444 81 39 2 39 114 5 84 2.80e-17 79.0
MS.gene016908.t1 AT3G09370 39.815 108 63 2 7 114 137 242 3.00e-17 83.2
MS.gene016908.t1 AT3G09370 35.417 96 61 1 13 108 91 185 9.14e-12 66.6
MS.gene016908.t1 AT5G35550 52.113 71 33 1 44 114 50 119 4.96e-17 80.5
MS.gene016908.t1 AT3G47600 46.667 75 39 1 44 118 39 112 1.10e-16 80.5
MS.gene016908.t1 AT3G29020 35.398 113 68 3 7 116 59 169 1.82e-16 78.2
MS.gene016908.t1 AT3G29020 35.398 113 68 3 7 116 61 171 2.39e-16 79.0
MS.gene016908.t1 AT5G40430 38.889 108 55 5 11 114 52 152 6.40e-15 74.3
MS.gene016908.t1 AT1G66380 48.649 74 36 2 44 116 8 80 1.20e-14 69.7
MS.gene016908.t1 AT1G14350 37.255 102 62 2 16 117 28 127 7.11e-14 72.8
MS.gene016908.t1 AT1G14350 37.255 102 62 2 16 117 28 127 7.11e-14 72.8
MS.gene016908.t1 AT2G02820 36.364 110 64 3 12 117 25 132 1.20e-13 72.0
MS.gene016908.t1 AT1G66380 41.429 70 41 0 4 73 1 70 1.20e-13 67.0
MS.gene016908.t1 AT2G02820 36.364 110 64 3 12 117 25 132 1.31e-13 72.0
MS.gene016908.t1 AT2G02820 36.275 102 63 2 16 117 33 132 2.86e-13 70.5
MS.gene016908.t1 AT1G22640 36.885 122 73 3 58 178 2 120 4.32e-12 65.1
MS.gene016908.t1 AT5G39700 37.895 95 57 2 16 110 59 151 1.79e-11 63.2
MS.gene016908.t1 AT3G18100 34.314 102 65 2 7 108 441 540 1.86e-11 65.9
MS.gene016908.t1 AT3G18100 38.235 102 51 4 12 108 497 591 3.74e-11 65.1
MS.gene016908.t1 AT1G18960 33.333 102 64 3 13 114 10 107 2.00e-11 64.7
MS.gene016908.t1 AT3G18100 34.314 102 65 2 7 108 489 588 2.08e-11 65.9
MS.gene016908.t1 AT3G18100 38.235 102 51 4 12 108 545 639 4.37e-11 64.7
MS.gene016908.t1 AT3G18100 33.981 103 66 2 6 108 327 427 2.55e-11 65.5
MS.gene016908.t1 AT3G18100 38.235 102 51 4 12 108 384 478 5.35e-11 64.3
MS.gene016908.t1 AT5G14750 47.368 57 29 1 58 114 2 57 2.70e-11 61.2
MS.gene016908.t1 AT5G14750 47.368 57 29 1 58 114 2 57 2.70e-11 61.2
MS.gene016908.t1 AT3G18100 33.981 103 66 2 6 108 275 375 3.48e-11 65.1
MS.gene016908.t1 AT3G18100 38.235 102 51 4 12 108 332 426 6.45e-11 64.3
MS.gene016908.t1 AT3G23250 49.123 57 28 1 58 114 2 57 4.67e-11 62.4

Find 72 sgRNAs with CRISPR-Local

Find 99 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATACCTCGTCCCAATTTC+TGG 0.140194 5.2:-75098273 None:intergenic
ACTTAATTGCTATAGATATT+TGG 0.186574 5.2:+75099406 MS.gene016908:CDS
ACATCATTCTCCAAAGAAAT+TGG 0.192323 5.2:-75099369 None:intergenic
TCCCAATTCTCTTCTGTATA+TGG 0.230489 5.2:-75099282 None:intergenic
CTCCATATACAGAAGAGAAT+TGG 0.259352 5.2:+75099280 MS.gene016908:CDS
AGGGGAGGAGCCAGTTTCTT+TGG 0.267488 5.2:+75099524 MS.gene016908:CDS
TCATTATCGGGCATTAATAA+AGG 0.274371 5.2:+75098182 MS.gene016908:CDS
TCATCCAGTTCCATGTTGTT+AGG 0.283723 5.2:-75098860 None:intergenic
AGGTAAGAAGCCAATTTCTT+TGG 0.298217 5.2:+75099359 MS.gene016908:CDS
AAAGTTCTTGATGTCATTAT+CGG 0.301665 5.2:-75098789 None:intergenic
ATAATGACATCAAGAACTTT+TGG 0.313765 5.2:+75098792 MS.gene016908:CDS
CTTGAGAATCCTCAACTTGT+TGG 0.319214 5.2:-75098907 None:intergenic
TTGATGTCAACCCAAAGTTT+TGG 0.324349 5.2:-75099585 None:intergenic
CTTAATGAATCCAAAACTTT+GGG 0.326521 5.2:+75099575 MS.gene016908:CDS
CAAGCTTCTACAACTATATA+TGG 0.337355 5.2:+75099647 MS.gene016908:CDS
ACTTAATGAATCCAAAACTT+TGG 0.351043 5.2:+75099574 MS.gene016908:CDS
AGAAGAGAATTGGGAAGGTT+TGG 0.355827 5.2:+75099290 MS.gene016908:CDS
CATCATCATGTCTTCATTAT+CGG 0.358301 5.2:+75098169 None:intergenic
ATGTCATTATCGGTTCTTCC+AGG 0.363679 5.2:-75098779 None:intergenic
CATTATCGGGCATTAATAAA+GGG 0.376510 5.2:+75098183 MS.gene016908:CDS
TTTCAGTTACGTAAGAAGTT+TGG 0.376528 5.2:+75098407 MS.gene016908:CDS
CTACCTCGAGATTGATTGAT+AGG 0.388558 5.2:+75099029 MS.gene016908:CDS
GTCAATTTCAGGGGTGGCGC+TGG 0.396196 5.2:+75099159 MS.gene016908:intron
AAATCATGCTCCAAAGAAAC+TGG 0.398721 5.2:-75099534 None:intergenic
TACACAACTATGTATGGAAA+AGG 0.412161 5.2:+75099504 MS.gene016908:CDS
TCCTTGTACACAACTATGTA+TGG 0.423410 5.2:+75099498 MS.gene016908:CDS
TCCATATACAGAAGAGAATT+GGG 0.426747 5.2:+75099281 MS.gene016908:CDS
CTTCCCTAACAACATGGAAC+TGG 0.436652 5.2:+75098856 MS.gene016908:CDS
ATCATCATGTCTTCATTATC+GGG 0.444255 5.2:+75098170 None:intergenic
CATCCAGTTCCATGTTGTTA+GGG 0.446519 5.2:-75098859 None:intergenic
CCCTCAGAATCCACCACCTA+TGG 0.451610 5.2:+75099227 MS.gene016908:CDS
TGAAATATTAAAAGCATATG+TGG 0.459693 5.2:+75098238 MS.gene016908:CDS
ACACAACTATGTATGGAAAA+GGG 0.465102 5.2:+75099505 MS.gene016908:CDS
ATCCTCAACTTGTTGGCCAC+TGG 0.467365 5.2:-75098900 None:intergenic
AACACGGGACTTGCACACTT+TGG 0.468274 5.2:+75098299 MS.gene016908:CDS
AGAAGTTTGGTGGATTCAAA+TGG 0.482331 5.2:+75098420 MS.gene016908:CDS
TCCATACATAGTTGTGTACA+AGG 0.486300 5.2:-75099499 None:intergenic
GGTTATTATACCATCTAAAA+CGG 0.488437 5.2:-75098331 None:intergenic
CAGTTACGTAAGAAGTTTGG+TGG 0.495477 5.2:+75098410 MS.gene016908:CDS
AAAACATGGAACCAGAAATT+GGG 0.497571 5.2:+75098262 MS.gene016908:CDS
CAGTTCCATGTTGTTAGGGA+AGG 0.499210 5.2:-75098855 None:intergenic
GATTGCATAGTCAAAAGTAT+AGG 0.519124 5.2:-75099189 None:intergenic
TCCATAGGTGGTGGATTCTG+AGG 0.525877 5.2:-75099228 None:intergenic
AAATATGTTCTACAATAATG+TGG 0.534435 5.2:+75098982 MS.gene016908:CDS
TTCCAGTGGCCAACAAGTTG+AGG 0.536535 5.2:+75098898 MS.gene016908:CDS
AGAAAAGTGGTCAAAAGAAG+AGG 0.545435 5.2:+75098214 MS.gene016908:CDS
GGTGGTGGATTCTGAGGGAG+TGG 0.551728 5.2:-75099222 None:intergenic
TATTGAGTCTCCATAGGTGG+TGG 0.558429 5.2:-75099237 None:intergenic
TTGGATTCATTAAGTCGTCA+TGG 0.567671 5.2:-75099566 None:intergenic
AGTTCCATGTTGTTAGGGAA+GGG 0.571026 5.2:-75098854 None:intergenic
CACAACTATGTATGGAAAAG+GGG 0.573076 5.2:+75099506 MS.gene016908:CDS
CCATAGGTGGTGGATTCTGA+GGG 0.573741 5.2:-75099227 None:intergenic
GGTGGATTCTGAGGGAGTGG+AGG 0.575220 5.2:-75099219 None:intergenic
ATCAAGAAAATTTATCTCAG+AGG 0.577404 5.2:-75099331 None:intergenic
AATATGTTCTACAATAATGT+GGG 0.586363 5.2:+75098983 MS.gene016908:CDS
TCTACAACTATATATGGAGA+AGG 0.608703 5.2:+75099653 MS.gene016908:CDS
ATGGTCTAAAATCGCTCGCG+AGG 0.609431 5.2:+75098439 MS.gene016908:CDS
CTATAGCAATTAAGTCGTCA+TGG 0.609967 5.2:-75099398 None:intergenic
GTCACCCTTCCCTAACAACA+TGG 0.618204 5.2:+75098850 MS.gene016908:CDS
TATACAGAAGAGAATTGGGA+AGG 0.620221 5.2:+75099285 MS.gene016908:CDS
ATCTGATATTGAGTCTCCAT+AGG 0.621708 5.2:-75099243 None:intergenic
GAGTTGAATGGTGGTTCCAG+TGG 0.640978 5.2:+75098884 MS.gene016908:CDS
TGATATTGAGTCTCCATAGG+TGG 0.654909 5.2:-75099240 None:intergenic
TGGTATAATAACCTACAACC+TGG 0.657649 5.2:+75098341 MS.gene016908:CDS
GGACGAGGTATCAAAGAACA+CGG 0.659332 5.2:+75098283 MS.gene016908:CDS
AACTATGTATGGAAAAGGGG+AGG 0.665968 5.2:+75099509 MS.gene016908:CDS
TCACCTATCAATCAATCTCG+AGG 0.669294 5.2:-75099032 None:intergenic
AAGAGAAAACATGAAAAGCG+TGG 0.670550 5.2:+75098824 MS.gene016908:CDS
CTGGATGATGAGTTGAATGG+TGG 0.697247 5.2:+75098875 MS.gene016908:CDS
GAACTGGATGATGAGTTGAA+TGG 0.699837 5.2:+75098872 MS.gene016908:CDS
TGGAACCAGAAATTGGGACG+AGG 0.701870 5.2:+75098268 MS.gene016908:CDS
GACGAGGTATCAAAGAACAC+GGG 0.719618 5.2:+75098284 MS.gene016908:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTAACGTATAATATTTTA+CGG - chr5.2:75099125-75099144 None:intergenic 10.0%
!! AAACTATGATGATATATTAA+AGG + chr5.2:75098589-75098608 MS.gene016908:intron 15.0%
!! AAATATGTTCTACAATAATG+TGG + chr5.2:75098982-75099001 MS.gene016908:CDS 20.0%
!! AATATGTTCTACAATAATGT+GGG + chr5.2:75098983-75099002 MS.gene016908:CDS 20.0%
!! ACTTAATTGCTATAGATATT+TGG + chr5.2:75099406-75099425 MS.gene016908:CDS 20.0%
!! CGGAAAACTATTATTAATAT+TGG - chr5.2:75099105-75099124 None:intergenic 20.0%
!!! AAATCTAGCTTTACATATTT+TGG + chr5.2:75098705-75098724 MS.gene016908:intron 20.0%
!!! ATAAATTTTCTTGATGAAGA+AGG + chr5.2:75099339-75099358 MS.gene016908:CDS 20.0%
!!! CTTTACATATTTTGGTATTA+TGG + chr5.2:75098713-75098732 MS.gene016908:intron 20.0%
!!! TCTTTTTTTCTTGAAAGAAT+TGG + chr5.2:75098491-75098510 MS.gene016908:intron 20.0%
!!! TGAAATATTAAAAGCATATG+TGG + chr5.2:75098238-75098257 MS.gene016908:CDS 20.0%
!!! TTTTCTTCTTCTTTACTAAA+TGG - chr5.2:75098380-75098399 None:intergenic 20.0%
! AAAGTTCTTGATGTCATTAT+CGG - chr5.2:75098792-75098811 None:intergenic 25.0%
! AATTACTTTCGTCAATTTCA+GGG + chr5.2:75099149-75099168 MS.gene016908:intron 25.0%
! ACTTAATGAATCCAAAACTT+TGG + chr5.2:75099574-75099593 MS.gene016908:CDS 25.0%
! ATCAAGAAAATTTATCTCAG+AGG - chr5.2:75099334-75099353 None:intergenic 25.0%
! ATCTCTACTAAACAACTTAT+AGG - chr5.2:75098638-75098657 None:intergenic 25.0%
! ATGATGATATATTAAAGGCA+GGG + chr5.2:75098594-75098613 MS.gene016908:intron 25.0%
! CTTAATGAATCCAAAACTTT+GGG + chr5.2:75099575-75099594 MS.gene016908:CDS 25.0%
! GGTTATTATACCATCTAAAA+CGG - chr5.2:75098334-75098353 None:intergenic 25.0%
! TATGATGATATATTAAAGGC+AGG + chr5.2:75098593-75098612 MS.gene016908:intron 25.0%
!! ATAATGACATCAAGAACTTT+TGG + chr5.2:75098792-75098811 MS.gene016908:CDS 25.0%
!! TTAATCAACGTGTAACTTTT+TGG - chr5.2:75098561-75098580 None:intergenic 25.0%
!!! ATTTTGATGTCTCAAATAAG+CGG + chr5.2:75098936-75098955 MS.gene016908:CDS 25.0%
!!! TTTTAAGTTGCATGTGTATA+TGG + chr5.2:75098665-75098684 MS.gene016908:intron 25.0%
AAAAACATGGAACCAGAAAT+TGG + chr5.2:75098261-75098280 MS.gene016908:CDS 30.0%
AAAACATGGAACCAGAAATT+GGG + chr5.2:75098262-75098281 MS.gene016908:CDS 30.0%
AAAGCATATGTGGAAAAACA+TGG + chr5.2:75098248-75098267 MS.gene016908:CDS 30.0%
AAGGGTTGAAAAAAGAAAAG+TGG + chr5.2:75098201-75098220 MS.gene016908:CDS 30.0%
ACACAACTATGTATGGAAAA+GGG + chr5.2:75099505-75099524 MS.gene016908:CDS 30.0%
ACATCATTCTCCAAAGAAAT+TGG - chr5.2:75099372-75099391 None:intergenic 30.0%
ATTACTTTCGTCAATTTCAG+GGG + chr5.2:75099150-75099169 MS.gene016908:intron 30.0%
CAAGCTTCTACAACTATATA+TGG + chr5.2:75099647-75099666 MS.gene016908:CDS 30.0%
CAATTACTTTCGTCAATTTC+AGG + chr5.2:75099148-75099167 MS.gene016908:intron 30.0%
CATTATCGGGCATTAATAAA+GGG + chr5.2:75098183-75098202 MS.gene016908:CDS 30.0%
TACACAACTATGTATGGAAA+AGG + chr5.2:75099504-75099523 MS.gene016908:CDS 30.0%
TACTAAACAACTTATAGGCA+TGG - chr5.2:75098633-75098652 None:intergenic 30.0%
TCATTATCGGGCATTAATAA+AGG + chr5.2:75098182-75098201 MS.gene016908:CDS 30.0%
TCCATATACAGAAGAGAATT+GGG + chr5.2:75099281-75099300 MS.gene016908:CDS 30.0%
TCTACAACTATATATGGAGA+AGG + chr5.2:75099653-75099672 MS.gene016908:CDS 30.0%
TTTCAGTTACGTAAGAAGTT+TGG + chr5.2:75098407-75098426 MS.gene016908:CDS 30.0%
! AAATAAGCGGTTTTCAAAGT+TGG + chr5.2:75098949-75098968 MS.gene016908:CDS 30.0%
! GATTGCATAGTCAAAAGTAT+AGG - chr5.2:75099192-75099211 None:intergenic 30.0%
AAATCATGCTCCAAAGAAAC+TGG - chr5.2:75099537-75099556 None:intergenic 35.0%
AAGAGAAAACATGAAAAGCG+TGG + chr5.2:75098824-75098843 MS.gene016908:CDS 35.0%
AGAAAAGTGGTCAAAAGAAG+AGG + chr5.2:75098214-75098233 MS.gene016908:CDS 35.0%
AGGTAAGAAGCCAATTTCTT+TGG + chr5.2:75099359-75099378 MS.gene016908:CDS 35.0%
ATCTGATATTGAGTCTCCAT+AGG - chr5.2:75099246-75099265 None:intergenic 35.0%
CACAACTATGTATGGAAAAG+GGG + chr5.2:75099506-75099525 MS.gene016908:CDS 35.0%
CTACAACCTGGTGTAAAAAA+GGG + chr5.2:75098353-75098372 MS.gene016908:CDS 35.0%
CTATAGCAATTAAGTCGTCA+TGG - chr5.2:75099401-75099420 None:intergenic 35.0%
CTCCATATACAGAAGAGAAT+TGG + chr5.2:75099280-75099299 MS.gene016908:CDS 35.0%
TATACAGAAGAGAATTGGGA+AGG + chr5.2:75099285-75099304 MS.gene016908:CDS 35.0%
TCCATACATAGTTGTGTACA+AGG - chr5.2:75099502-75099521 None:intergenic 35.0%
TCCCAATTCTCTTCTGTATA+TGG - chr5.2:75099285-75099304 None:intergenic 35.0%
TCCTTGTACACAACTATGTA+TGG + chr5.2:75099498-75099517 MS.gene016908:CDS 35.0%
TGGTATAATAACCTACAACC+TGG + chr5.2:75098341-75098360 MS.gene016908:CDS 35.0%
TTGGATTCATTAAGTCGTCA+TGG - chr5.2:75099569-75099588 None:intergenic 35.0%
! TTGATGTCAACCCAAAGTTT+TGG - chr5.2:75099588-75099607 None:intergenic 35.0%
!! AGAAGTTTGGTGGATTCAAA+TGG + chr5.2:75098420-75098439 MS.gene016908:CDS 35.0%
!!! TTATTTTTGTGACAGTTGCC+TGG + chr5.2:75098761-75098780 MS.gene016908:intron 35.0%
AACTATGTATGGAAAAGGGG+AGG + chr5.2:75099509-75099528 MS.gene016908:CDS 40.0%
AGAAGAGAATTGGGAAGGTT+TGG + chr5.2:75099290-75099309 MS.gene016908:CDS 40.0%
AGTTCCATGTTGTTAGGGAA+GGG - chr5.2:75098857-75098876 None:intergenic 40.0%
CAGTTACGTAAGAAGTTTGG+TGG + chr5.2:75098410-75098429 MS.gene016908:CDS 40.0%
CATCCAGTTCCATGTTGTTA+GGG - chr5.2:75098862-75098881 None:intergenic 40.0%
CCTACAACCTGGTGTAAAAA+AGG + chr5.2:75098352-75098371 MS.gene016908:CDS 40.0%
CTACCTCGAGATTGATTGAT+AGG + chr5.2:75099029-75099048 MS.gene016908:CDS 40.0%
CTTGAGAATCCTCAACTTGT+TGG - chr5.2:75098910-75098929 None:intergenic 40.0%
TCACCTATCAATCAATCTCG+AGG - chr5.2:75099035-75099054 None:intergenic 40.0%
TCATCCAGTTCCATGTTGTT+AGG - chr5.2:75098863-75098882 None:intergenic 40.0%
TGATATTGAGTCTCCATAGG+TGG - chr5.2:75099243-75099262 None:intergenic 40.0%
! GAACTGGATGATGAGTTGAA+TGG + chr5.2:75098872-75098891 MS.gene016908:CDS 40.0%
!! ATGTCATTATCGGTTCTTCC+AGG - chr5.2:75098782-75098801 None:intergenic 40.0%
!!! AATGGACCCTTTTTTACACC+AGG - chr5.2:75098362-75098381 None:intergenic 40.0%
!!! CCTTTTTTACACCAGGTTGT+AGG - chr5.2:75098355-75098374 None:intergenic 40.0%
!!! GAAGAAGTTGCCGTTTTAGA+TGG + chr5.2:75098321-75098340 MS.gene016908:CDS 40.0%
ACTTTCGTCAATTTCAGGGG+TGG + chr5.2:75099153-75099172 MS.gene016908:intron 45.0%
CAGTTCCATGTTGTTAGGGA+AGG - chr5.2:75098858-75098877 None:intergenic 45.0%
CTTCCCTAACAACATGGAAC+TGG + chr5.2:75098856-75098875 MS.gene016908:CDS 45.0%
TATTGAGTCTCCATAGGTGG+TGG - chr5.2:75099240-75099259 None:intergenic 45.0%
TGATACCTCGTCCCAATTTC+TGG - chr5.2:75098276-75098295 None:intergenic 45.0%
! CTGGATGATGAGTTGAATGG+TGG + chr5.2:75098875-75098894 MS.gene016908:CDS 45.0%
! GACGAGGTATCAAAGAACAC+GGG + chr5.2:75098284-75098303 MS.gene016908:CDS 45.0%
! GGACGAGGTATCAAAGAACA+CGG + chr5.2:75098283-75098302 MS.gene016908:CDS 45.0%
AACACGGGACTTGCACACTT+TGG + chr5.2:75098299-75098318 MS.gene016908:CDS 50.0%
GAGTTGAATGGTGGTTCCAG+TGG + chr5.2:75098884-75098903 MS.gene016908:CDS 50.0%
GTCACCCTTCCCTAACAACA+TGG + chr5.2:75098850-75098869 MS.gene016908:CDS 50.0%
TGGAACCAGAAATTGGGACG+AGG + chr5.2:75098268-75098287 MS.gene016908:CDS 50.0%
TTCCAGTGGCCAACAAGTTG+AGG + chr5.2:75098898-75098917 MS.gene016908:CDS 50.0%
! ATGGTCTAAAATCGCTCGCG+AGG + chr5.2:75098439-75098458 MS.gene016908:CDS 50.0%
!! ATCCTCAACTTGTTGGCCAC+TGG - chr5.2:75098903-75098922 None:intergenic 50.0%
!! CCATAGGTGGTGGATTCTGA+GGG - chr5.2:75099230-75099249 None:intergenic 50.0%
!! TCCATAGGTGGTGGATTCTG+AGG - chr5.2:75099231-75099250 None:intergenic 50.0%
AGGGGAGGAGCCAGTTTCTT+TGG + chr5.2:75099524-75099543 MS.gene016908:CDS 55.0%
CCCTCAGAATCCACCACCTA+TGG + chr5.2:75099227-75099246 MS.gene016908:CDS 55.0%
GTCAATTTCAGGGGTGGCGC+TGG + chr5.2:75099159-75099178 MS.gene016908:intron 60.0%
! GGTGGATTCTGAGGGAGTGG+AGG - chr5.2:75099222-75099241 None:intergenic 60.0%
!! GGTGGTGGATTCTGAGGGAG+TGG - chr5.2:75099225-75099244 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 75098176 75099680 75098176 ID=MS.gene016908
chr5.2 mRNA 75098176 75099680 75098176 ID=MS.gene016908.t1;Parent=MS.gene016908
chr5.2 exon 75098176 75098460 75098176 ID=MS.gene016908.t1.exon1;Parent=MS.gene016908.t1
chr5.2 CDS 75098176 75098460 75098176 ID=cds.MS.gene016908.t1;Parent=MS.gene016908.t1
chr5.2 exon 75098776 75099050 75098776 ID=MS.gene016908.t1.exon2;Parent=MS.gene016908.t1
chr5.2 CDS 75098776 75099050 75098776 ID=cds.MS.gene016908.t1;Parent=MS.gene016908.t1
chr5.2 exon 75099170 75099680 75099170 ID=MS.gene016908.t1.exon3;Parent=MS.gene016908.t1
chr5.2 CDS 75099170 75099680 75099170 ID=cds.MS.gene016908.t1;Parent=MS.gene016908.t1
Gene Sequence

>MS.gene016908

ATGTCTTCATTATCGGGCATTAATAAAGGGTTGAAAAAAGAAAAGTGGTCAAAAGAAGAGGATGAAATATTAAAAGCATATGTGGAAAAACATGGAACCAGAAATTGGGACGAGGTATCAAAGAACACGGGACTTGCACACTTTGGAAGAAGTTGCCGTTTTAGATGGTATAATAACCTACAACCTGGTGTAAAAAAGGGTCCATTTAGTAAAGAAGAAGAAAATAAAGTCTTTCAGTTACGTAAGAAGTTTGGTGGATTCAAATGGTCTAAAATCGCTCGCGAGGTATTTTTTTTTTTTCAATTGATATATTTATCTTTTTTTCTTGAAAGAATTGGAAATTTTTATCTATCTTTTATCGAAGTATGATGTTATCTTTTAACCAAAAAGTTACACGTTGATTAAAAAAAAAAAAACTATGATGATATATTAAAGGCAGGGAGTTTATCAATTACCATGCCTATAAGTTGTTTAGTAGAGATTGTTAGTTTTTAAGTTGCATGTGTATATGGTTGAGAGAGTTTCTGAAAAATCTAGCTTTACATATTTTGGTATTATGGTGATCATGTCATTAATTTGCATTCGTTATTTTTGTGACAGTTGCCTGGAAGAACCGATAATGACATCAAGAACTTTTGGAATGCGAGAAAGAGAAAACATGAAAAGCGTGGCTTGTCACCCTTCCCTAACAACATGGAACTGGATGATGAGTTGAATGGTGGTTCCAGTGGCCAACAAGTTGAGGATTCTCAAGAAAATAATTTTGATGTCTCAAATAAGCGGTTTTCAAAGTTGGTTGATGATTCAAATATGTTCTACAATAATGTGGGAAGTACTTCTACAAGCAATCATACTACCTCGAGATTGATTGATAGGTGAGTAGATTATGCATTGCTATTCTCTTTTATATACATCTATTAGTGTTGCCAATATTAATAATAGTTTTCCGTAAAATATTATACGTTAAATTTACAATTACTTTCGTCAATTTCAGGGGTGGCGCTGGAATTTCACCTATACTTTTGACTATGCAATCTGATCTGCCTCCACTCCCTCAGAATCCACCACCTATGGAGACTCAATATCAGATGTCAGAATCAATTTCTCCATATACAGAAGAGAATTGGGAAGGTTTGGATGCTAGTCGCGTGCATTCCTCTGAGATAAATTTTCTTGATGAAGAAGGTAAGAAGCCAATTTCTTTGGAGAATGATGTTGAAGACCATGACGACTTAATTGCTATAGATATTTGGTTAAACTATGACTTAAATGAAGAAGACATTCACAACTTACATGACAAGCTTCAGCATGATGTAAATGATTCCTTGTACACAACTATGTATGGAAAAGGGGAGGAGCCAGTTTCTTTGGAGCATGATTTTGAATTAAACCATGACGACTTAATGAATCCAAAACTTTGGGTTGACATCAACGAATTACTCAATGACGATGACAATAACTCTGATCATGACAAGCTTCTACAACTATATATGGAGAAGGCATAG
Protein sequence

>MS.gene016908.t1

MSSLSGINKGLKKEKWSKEEDEILKAYVEKHGTRNWDEVSKNTGLAHFGRSCRFRWYNNLQPGVKKGPFSKEEENKVFQLRKKFGGFKWSKIARELPGRTDNDIKNFWNARKRKHEKRGLSPFPNNMELDDELNGGSSGQQVEDSQENNFDVSNKRFSKLVDDSNMFYNNVGSTSTSNHTTSRLIDRGGAGISPILLTMQSDLPPLPQNPPPMETQYQMSESISPYTEENWEGLDASRVHSSEINFLDEEGKKPISLENDVEDHDDLIAIDIWLNYDLNEEDIHNLHDKLQHDVNDSLYTTMYGKGEEPVSLEHDFELNHDDLMNPKLWVDINELLNDDDNNSDHDKLLQLYMEKA