AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene016911

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene016911.t1 MTR_5g062790 75.806 310 23 4 2 265 1 304 5.45e-156 436
MS.gene016911.t1 MTR_5g088640 71.972 289 23 8 10 265 12 275 2.71e-129 367
MS.gene016911.t1 MTR_5g088080 71.583 278 27 6 10 260 12 264 7.15e-127 361
MS.gene016911.t1 MTR_5g088150 71.583 278 27 6 10 260 12 264 7.15e-127 361
MS.gene016911.t1 MTR_5g488210 71.583 278 27 6 10 260 12 264 7.15e-127 361
MS.gene016911.t1 MTR_5g488170 77.727 220 22 3 10 202 12 231 5.60e-114 327
MS.gene016911.t1 MTR_4g128190 54.965 282 45 9 2 244 1 239 1.93e-84 252
MS.gene016911.t1 MTR_5g088610 72.611 157 40 1 2 155 1 157 2.39e-74 231
MS.gene016911.t1 MTR_1g085770 54.054 222 81 8 3 206 4 222 7.58e-62 197
MS.gene016911.t1 MTR_1g085880 61.765 170 57 5 3 164 4 173 2.34e-58 184
MS.gene016911.t1 MTR_1g021230 42.690 171 84 3 11 168 58 227 6.38e-41 146
MS.gene016911.t1 MTR_1g017000 41.341 179 95 4 10 179 12 189 8.53e-40 139
MS.gene016911.t1 MTR_3g052450 47.297 148 75 3 8 153 38 184 1.08e-39 144
MS.gene016911.t1 MTR_1g083630 50.676 148 68 3 2 145 1 147 1.17e-39 145
MS.gene016911.t1 MTR_3g052430 52.542 118 55 1 8 125 39 155 1.11e-38 142
MS.gene016911.t1 MTR_8g042410 37.755 196 105 3 4 192 31 216 8.18e-38 139
MS.gene016911.t1 MTR_4g073420 49.231 130 62 3 8 136 10 136 2.03e-37 133
MS.gene016911.t1 MTR_5g029840 52.066 121 56 2 10 129 12 131 5.18e-37 134
MS.gene016911.t1 MTR_0008s0280 50.847 118 57 1 10 127 12 128 5.81e-37 130
MS.gene016911.t1 MTR_2g088170 53.782 119 54 1 11 129 30 147 7.32e-37 135
MS.gene016911.t1 MTR_3g461490 50.427 117 56 2 10 125 12 127 9.35e-37 132
MS.gene016911.t1 MTR_3g011610 39.130 161 91 3 11 165 38 197 1.10e-36 136
MS.gene016911.t1 MTR_8g095390 53.509 114 51 2 9 121 11 123 7.45e-36 130
MS.gene016911.t1 MTR_2g089620 52.212 113 52 2 11 122 13 124 2.29e-35 129
MS.gene016911.t1 MTR_3g097450 52.632 114 52 2 9 121 11 123 2.35e-35 128
MS.gene016911.t1 MTR_5g007370 48.092 131 64 3 11 138 13 142 2.62e-35 128
MS.gene016911.t1 MTR_7g035075 50.000 116 57 1 3 118 7 121 5.32e-35 125
MS.gene016911.t1 MTR_4g091490 51.327 113 53 2 11 122 14 125 6.86e-35 128
MS.gene016911.t1 MTR_2g011660 52.679 112 51 2 11 121 14 124 8.33e-35 128
MS.gene016911.t1 MTR_2g064160 48.718 117 58 2 6 121 7 122 8.57e-35 127
MS.gene016911.t1 MTR_1g043080 51.456 103 49 1 11 113 13 114 9.71e-35 125
MS.gene016911.t1 MTR_4g478180 50.000 116 56 2 11 125 14 128 1.12e-34 128
MS.gene016911.t1 MTR_7g110830 45.270 148 70 4 11 148 13 159 1.23e-34 128
MS.gene016911.t1 MTR_3g074520 48.333 120 60 2 11 129 13 131 1.32e-34 127
MS.gene016911.t1 MTR_6g006030 51.351 111 53 1 3 113 7 116 1.54e-34 124
MS.gene016911.t1 MTR_7g115650 50.467 107 51 2 11 116 13 118 1.93e-34 123
MS.gene016911.t1 MTR_7g076740 50.442 113 53 3 11 121 13 124 1.97e-34 126
MS.gene016911.t1 MTR_1g076150 51.456 103 49 1 11 113 13 114 2.86e-34 124
MS.gene016911.t1 MTR_1g085640 45.522 134 71 2 11 143 13 145 4.30e-34 127
MS.gene016911.t1 MTR_0008s0390 46.825 126 59 3 11 136 14 131 5.40e-34 124
MS.gene016911.t1 MTR_1g085040 48.413 126 59 3 11 131 13 137 5.93e-34 126
MS.gene016911.t1 MTR_4g065017 43.056 144 75 3 11 148 18 160 6.97e-34 125
MS.gene016911.t1 MTR_1g043050 49.558 113 54 2 11 121 13 124 8.52e-34 123
MS.gene016911.t1 MTR_4g105130 42.254 142 80 2 11 151 13 153 1.08e-33 125
MS.gene016911.t1 MTR_1g100653 42.400 125 71 1 10 134 12 135 1.37e-33 124
MS.gene016911.t1 MTR_2g097910 49.180 122 57 3 11 131 21 138 1.84e-33 124
MS.gene016911.t1 MTR_5g078140 45.652 138 71 3 11 147 13 147 1.87e-33 124
MS.gene016911.t1 MTR_1g110460 37.500 176 80 4 11 157 27 201 2.07e-33 124
MS.gene016911.t1 MTR_0251s0050 40.845 142 74 3 11 151 14 146 2.13e-33 122
MS.gene016911.t1 MTR_8g017440 47.154 123 62 3 3 123 5 126 2.21e-33 124
MS.gene016911.t1 MTR_6g009430 48.718 117 58 2 10 125 12 127 2.43e-33 124
MS.gene016911.t1 MTR_3g065440 46.457 127 66 2 11 136 13 138 2.69e-33 123
MS.gene016911.t1 MTR_3g077110 50.000 116 56 2 11 125 13 127 3.58e-33 124
MS.gene016911.t1 MTR_1g112760 47.581 124 63 2 3 125 6 128 3.71e-33 120
MS.gene016911.t1 MTR_6g012690 46.032 126 66 2 11 135 13 137 5.37e-33 123
MS.gene016911.t1 MTR_5g079670 40.136 147 86 2 12 157 13 158 5.82e-33 120
MS.gene016911.t1 MTR_1g017140 55.140 107 46 2 8 113 10 115 6.16e-33 123
MS.gene016911.t1 MTR_2g095520 56.311 103 43 2 8 109 10 111 6.66e-33 122
MS.gene016911.t1 MTR_7g011170 47.414 116 59 2 11 125 13 127 1.04e-32 122
MS.gene016911.t1 MTR_4g057635 54.286 105 46 2 10 113 12 115 1.70e-32 121
MS.gene016911.t1 MTR_5g014990 54.206 107 47 2 8 113 10 115 1.73e-32 121
MS.gene016911.t1 MTR_2g089450 50.485 103 50 1 11 113 13 114 2.22e-32 119
MS.gene016911.t1 MTR_8g031360 48.673 113 55 3 11 121 14 125 2.61e-32 120
MS.gene016911.t1 MTR_0008s0470 43.704 135 65 4 11 142 14 140 2.64e-32 120
MS.gene016911.t1 MTR_2g099740 47.500 120 61 2 3 121 5 123 3.05e-32 122
MS.gene016911.t1 MTR_3g028740 51.456 103 49 1 11 113 23 124 3.08e-32 121
MS.gene016911.t1 MTR_4g082290 44.776 134 70 3 11 141 13 145 4.08e-32 122
MS.gene016911.t1 MTR_4g485530 47.748 111 56 2 12 121 14 123 4.29e-32 117
MS.gene016911.t1 MTR_4g097570 55.882 102 43 2 8 108 10 110 5.23e-32 119
MS.gene016911.t1 MTR_7g111290 55.102 98 43 1 11 108 13 109 5.28e-32 121
MS.gene016911.t1 MTR_8g017500 46.903 113 58 2 10 121 12 123 7.90e-32 120
MS.gene016911.t1 MTR_1g086530 43.966 116 64 1 2 117 25 139 1.01e-31 118
MS.gene016911.t1 MTR_3g103570 52.336 107 49 2 8 113 10 115 1.02e-31 120
MS.gene016911.t1 MTR_7g096930 48.544 103 52 1 11 113 13 114 1.26e-31 118
MS.gene016911.t1 MTR_1g062940 51.456 103 49 1 11 113 7 108 1.37e-31 116
MS.gene016911.t1 MTR_4g082230 44.030 134 71 3 11 141 13 145 1.75e-31 120
MS.gene016911.t1 MTR_8g017540 47.748 111 57 1 3 113 51 160 2.00e-31 120
MS.gene016911.t1 MTR_7g102110 41.830 153 73 4 8 159 10 147 2.19e-31 117
MS.gene016911.t1 MTR_4g029540 43.624 149 78 4 8 152 8 154 2.29e-31 118
MS.gene016911.t1 MTR_4g102380 49.123 114 56 2 10 122 12 124 2.33e-31 117
MS.gene016911.t1 MTR_8g020490 49.533 107 52 2 12 117 10 115 2.37e-31 117
MS.gene016911.t1 MTR_5g010020 50.000 100 49 1 10 109 12 110 2.52e-31 119
MS.gene016911.t1 MTR_4g121460 49.515 103 51 1 11 113 13 114 3.52e-31 118
MS.gene016911.t1 MTR_4g128670 53.398 103 46 2 8 109 10 111 4.63e-31 118
MS.gene016911.t1 MTR_8g098860 45.690 116 61 2 3 117 5 119 5.03e-31 117
MS.gene016911.t1 MTR_5g042030 48.276 116 58 2 11 125 8 122 5.10e-31 117
MS.gene016911.t1 MTR_0063s0090 45.794 107 57 1 10 116 12 117 6.64e-31 115
MS.gene016911.t1 MTR_1g073170 49.057 106 53 1 11 116 21 125 7.13e-31 115
MS.gene016911.t1 MTR_0140s0030 48.598 107 53 2 11 116 14 119 1.18e-30 117
MS.gene016911.t1 MTR_0489s0020 48.598 107 53 2 11 116 14 119 1.18e-30 117
MS.gene016911.t1 MTR_6g090405 36.413 184 107 6 10 191 12 187 1.43e-30 115
MS.gene016911.t1 MTR_1g086510 46.296 108 57 1 10 117 21 127 1.44e-30 115
MS.gene016911.t1 MTR_4g097570 55.340 103 43 3 8 108 10 111 1.94e-30 115
MS.gene016911.t1 MTR_3g083540 43.966 116 63 2 11 125 42 156 3.46e-30 115
MS.gene016911.t1 MTR_4g100720 47.959 98 50 1 12 109 15 111 3.55e-30 111
MS.gene016911.t1 MTR_8g006470 44.444 117 63 2 1 116 1 116 6.78e-30 114
MS.gene016911.t1 MTR_4g063100 44.538 119 62 2 6 121 3 120 8.16e-30 112
MS.gene016911.t1 MTR_6g012180 48.000 100 51 1 10 109 12 110 9.24e-30 114
MS.gene016911.t1 MTR_8g027345 47.170 106 55 1 12 117 14 118 1.29e-29 113
MS.gene016911.t1 MTR_7g010210 48.148 108 54 2 10 116 12 118 1.42e-29 112
MS.gene016911.t1 MTR_3g039990 46.296 108 57 1 10 117 13 119 1.48e-29 113
MS.gene016911.t1 MTR_7g010210 48.148 108 54 2 10 116 12 118 2.06e-29 113
MS.gene016911.t1 MTR_8g017340 47.107 121 61 3 3 121 5 124 2.44e-29 115
MS.gene016911.t1 MTR_2g089420 47.573 103 53 1 11 113 12 113 2.62e-29 115
MS.gene016911.t1 MTR_2g067420 50.485 103 50 1 8 110 12 113 2.72e-29 113
MS.gene016911.t1 MTR_4g125520 48.980 98 49 1 12 109 14 110 4.32e-29 112
MS.gene016911.t1 MTR_1g045610 44.643 112 58 2 11 122 22 129 4.60e-29 110
MS.gene016911.t1 MTR_8g017390 48.571 105 52 2 10 113 12 115 5.05e-29 114
MS.gene016911.t1 MTR_7g087130 49.533 107 52 2 11 116 13 118 5.96e-29 112
MS.gene016911.t1 MTR_8g017350 46.281 121 62 3 3 121 5 124 6.15e-29 115
MS.gene016911.t1 MTR_2g034790 48.544 103 52 1 11 113 13 114 6.42e-29 112
MS.gene016911.t1 MTR_7g117730 46.939 98 51 1 12 109 14 110 6.85e-29 110
MS.gene016911.t1 MTR_1g100667 45.872 109 58 1 11 119 14 121 9.53e-29 110
MS.gene016911.t1 MTR_6g055910 47.222 108 56 1 11 118 15 121 1.14e-28 110
MS.gene016911.t1 MTR_2g033170 45.299 117 63 1 1 117 15 130 1.15e-28 111
MS.gene016911.t1 MTR_5g078910 47.573 103 53 1 11 113 8 109 1.29e-28 110
MS.gene016911.t1 MTR_7g109320 52.525 99 46 1 11 109 13 110 5.75e-28 110
MS.gene016911.t1 MTR_5g079290 45.192 104 56 1 10 113 17 119 1.77e-27 107
MS.gene016911.t1 MTR_8g060940 44.231 104 57 1 6 109 3 105 2.28e-27 106
MS.gene016911.t1 MTR_2g096380 46.154 104 55 1 10 113 6 108 2.28e-27 105
MS.gene016911.t1 MTR_4g123040 46.729 107 56 1 11 117 25 130 2.94e-27 107
MS.gene016911.t1 MTR_7g017260 30.882 272 149 11 2 248 17 274 3.79e-27 106
MS.gene016911.t1 MTR_5g079220 42.857 112 63 1 2 113 13 123 6.12e-27 105
MS.gene016911.t1 MTR_0197s0010 46.000 100 53 1 14 113 5 103 6.93e-27 104
MS.gene016911.t1 MTR_0193s0090 35.294 136 87 1 5 140 2 136 7.79e-27 103
MS.gene016911.t1 MTR_5g078930 39.535 129 74 2 2 130 1 125 9.92e-27 103
MS.gene016911.t1 MTR_0247s0040 41.667 108 62 1 5 112 2 108 2.07e-26 102
MS.gene016911.t1 MTR_5g078950 44.660 103 56 1 10 112 7 108 2.98e-26 103
MS.gene016911.t1 MTR_4g019370 48.624 109 49 4 12 119 38 140 4.82e-26 104
MS.gene016911.t1 MTR_3g101290 45.872 109 57 2 12 120 37 143 9.70e-26 101
MS.gene016911.t1 MTR_5g078860 45.631 103 55 1 11 113 8 109 1.09e-25 103
MS.gene016911.t1 MTR_5g079120 42.718 103 58 1 11 113 62 163 1.13e-25 103
MS.gene016911.t1 MTR_0001s0360 43.269 104 58 1 10 113 7 109 2.15e-25 101
MS.gene016911.t1 MTR_3g077650 44.737 114 59 3 12 123 181 292 2.99e-25 103
MS.gene016911.t1 MTR_5g016510 49.515 103 49 3 12 113 5 105 5.74e-25 101
MS.gene016911.t1 MTR_5g078800 44.660 103 56 1 11 113 8 109 7.16e-25 100
MS.gene016911.t1 MTR_7g035350 49.524 105 51 2 10 114 223 325 1.09e-24 102
MS.gene016911.t1 MTR_5g049190 43.363 113 60 3 2 113 9 118 1.32e-24 99.0
MS.gene016911.t1 MTR_3g463400 45.794 107 54 3 12 117 133 236 2.29e-24 101
MS.gene016911.t1 MTR_7g451170 46.078 102 53 2 12 113 191 290 6.05e-24 100
MS.gene016911.t1 MTR_5g070020 43.363 113 60 3 6 117 116 225 7.38e-24 99.0
MS.gene016911.t1 MTR_4g105660 45.631 103 52 3 12 113 180 279 7.60e-24 99.8
MS.gene016911.t1 MTR_6g015455 48.980 98 46 3 12 108 5 99 2.68e-23 99.4
MS.gene016911.t1 MTR_3g045430 38.760 129 74 3 1 125 1 128 2.99e-23 96.3
MS.gene016911.t1 MTR_7g037260 45.098 102 54 2 12 113 145 244 6.03e-23 96.7
MS.gene016911.t1 MTR_5g082910 47.959 98 49 2 12 109 19 114 6.21e-23 95.5
MS.gene016911.t1 MTR_6g074860 39.048 105 62 2 12 116 4 106 6.55e-23 94.4
MS.gene016911.t1 MTR_4g094982 48.544 103 50 3 12 113 5 105 1.30e-22 94.4
MS.gene016911.t1 MTR_6g027340 37.719 114 69 2 12 125 16 127 1.57e-22 92.4
MS.gene016911.t1 MTR_7g450950 39.823 113 66 2 5 117 150 260 2.85e-22 94.4
MS.gene016911.t1 MTR_7g111290 56.716 67 28 1 42 108 2 67 3.29e-22 94.4
MS.gene016911.t1 MTR_4g088015 44.118 102 55 2 12 113 221 320 3.33e-22 95.5
MS.gene016911.t1 MTR_1g057980 43.636 110 60 2 11 120 79 186 3.71e-22 93.6
MS.gene016911.t1 MTR_5g010650 48.454 97 48 2 12 108 110 204 4.54e-22 95.1
MS.gene016911.t1 MTR_4g063100 49.398 83 38 2 42 121 10 91 8.37e-22 90.9
MS.gene016911.t1 MTR_7g037130 43.396 106 58 2 12 117 145 248 1.33e-21 92.8
MS.gene016911.t1 MTR_6g027360 38.261 115 67 3 12 125 78 189 6.20e-21 90.1
MS.gene016911.t1 MTR_1g026870 41.176 102 58 2 12 113 85 184 1.09e-20 91.7
MS.gene016911.t1 MTR_1g026870 37.374 99 61 1 10 108 31 128 8.94e-15 74.3
MS.gene016911.t1 MTR_3g110028 41.176 102 58 2 12 113 85 184 1.33e-20 91.7
MS.gene016911.t1 MTR_3g110028 37.374 99 61 1 10 108 31 128 3.29e-15 75.5
MS.gene016911.t1 MTR_5g007300 45.349 86 45 1 1 84 53 138 2.44e-20 84.7
MS.gene016911.t1 MTR_3g089045 43.220 118 57 5 3 113 4 118 2.45e-20 88.6
MS.gene016911.t1 MTR_2g096380 51.389 72 34 1 42 113 19 89 2.85e-20 86.7
MS.gene016911.t1 MTR_6g055910 48.684 76 38 1 43 118 18 92 6.21e-20 86.7
MS.gene016911.t1 MTR_7g061550 42.308 104 57 2 15 116 10 112 7.03e-20 88.2
MS.gene016911.t1 MTR_7g061330 39.316 117 64 3 12 123 113 227 1.51e-19 88.2
MS.gene016911.t1 MTR_7g061330 36.082 97 61 1 12 108 61 156 2.12e-13 70.1
MS.gene016911.t1 MTR_7g461410 39.316 117 64 3 12 123 113 227 1.51e-19 88.2
MS.gene016911.t1 MTR_7g461410 36.082 97 61 1 12 108 61 156 2.12e-13 70.1
MS.gene016911.t1 MTR_7g061330 39.316 117 64 3 12 123 77 191 2.04e-19 87.8
MS.gene016911.t1 MTR_7g061330 36.082 97 61 1 12 108 25 120 2.40e-13 69.7
MS.gene016911.t1 MTR_4g082040 41.441 111 58 4 7 113 100 207 2.26e-19 87.0
MS.gene016911.t1 MTR_5g041570 40.000 110 61 3 7 113 129 236 2.52e-19 87.0
MS.gene016911.t1 MTR_7g086960 42.718 103 57 2 7 109 84 184 1.50e-18 84.3
MS.gene016911.t1 MTR_0023s0210 46.053 76 41 0 6 81 3 78 3.13e-18 77.4
MS.gene016911.t1 MTR_6g027370 37.719 114 69 2 12 125 99 210 1.06e-17 82.0
MS.gene016911.t1 MTR_5g038910 36.893 103 63 2 14 116 28 128 1.06e-14 73.9
MS.gene016911.t1 MTR_8g468380 34.951 103 65 2 14 116 24 124 1.80e-14 73.2
MS.gene016911.t1 MTR_5g038910 36.893 103 63 2 14 116 28 128 2.05e-14 72.8
MS.gene016911.t1 MTR_6g013135 36.842 114 63 4 95 205 148 255 3.50e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene016911.t1 AT2G26960 45.570 158 73 2 12 157 22 178 5.65e-44 154
MS.gene016911.t1 AT2G32460 44.444 144 72 2 11 154 7 142 6.88e-41 147
MS.gene016911.t1 AT2G32460 44.444 144 72 2 11 154 19 154 7.56e-41 147
MS.gene016911.t1 AT5G55020 52.542 118 55 1 11 128 27 143 2.57e-40 146
MS.gene016911.t1 AT3G11440 51.667 120 57 1 11 130 42 160 3.48e-39 142
MS.gene016911.t1 AT5G06100 52.586 116 54 1 11 126 33 147 6.76e-39 141
MS.gene016911.t1 AT4G38620 45.161 155 79 4 8 159 10 161 8.16e-39 137
MS.gene016911.t1 AT3G11440 44.375 160 82 3 11 164 42 200 8.96e-39 142
MS.gene016911.t1 AT3G11440 44.375 160 82 3 11 164 42 200 8.96e-39 142
MS.gene016911.t1 AT3G11440 44.375 160 82 3 11 164 42 200 8.96e-39 142
MS.gene016911.t1 AT5G06100 52.586 116 54 1 11 126 33 147 1.36e-38 141
MS.gene016911.t1 AT5G06100 52.586 116 54 1 11 126 33 147 1.36e-38 141
MS.gene016911.t1 AT5G06100 52.586 116 54 1 11 126 33 147 1.36e-38 141
MS.gene016911.t1 AT5G06100 52.586 116 54 1 11 126 33 147 1.36e-38 141
MS.gene016911.t1 AT4G26930 45.324 139 71 2 11 149 20 153 2.57e-38 138
MS.gene016911.t1 AT4G09460 44.667 150 79 3 8 154 10 158 4.91e-38 134
MS.gene016911.t1 AT5G56110 52.137 117 54 2 10 125 12 127 6.70e-38 135
MS.gene016911.t1 AT4G01680 44.966 149 74 4 2 143 1 148 1.97e-36 129
MS.gene016911.t1 AT1G35515 50.435 115 55 2 8 121 10 123 2.86e-36 128
MS.gene016911.t1 AT5G26660 50.400 125 60 2 11 134 13 136 4.55e-36 131
MS.gene016911.t1 AT3G12720 49.167 120 59 2 10 128 22 140 5.09e-36 130
MS.gene016911.t1 AT2G26950 50.435 115 56 1 12 126 18 131 5.28e-36 132
MS.gene016911.t1 AT1G57560 46.853 143 70 3 11 148 13 154 8.96e-36 129
MS.gene016911.t1 AT1G57560 41.667 180 92 5 11 181 13 188 1.25e-35 129
MS.gene016911.t1 AT4G34990 46.377 138 70 3 9 145 11 145 1.26e-35 128
MS.gene016911.t1 AT4G21440 52.679 112 51 2 11 121 13 123 1.44e-35 130
MS.gene016911.t1 AT4G01680 46.715 137 68 3 11 143 13 148 1.69e-35 130
MS.gene016911.t1 AT5G54230 50.877 114 54 2 10 122 12 124 2.51e-35 129
MS.gene016911.t1 AT1G22640 49.167 120 59 2 8 126 10 128 3.12e-35 127
MS.gene016911.t1 AT1G09540 50.400 125 58 3 11 134 13 134 4.69e-35 129
MS.gene016911.t1 AT3G27810 50.893 112 54 1 6 117 16 126 5.14e-35 125
MS.gene016911.t1 AT3G61250 49.107 112 55 2 11 121 13 123 5.22e-35 127
MS.gene016911.t1 AT1G18570 49.138 116 57 2 11 125 14 128 7.21e-35 128
MS.gene016911.t1 AT4G28110 51.754 114 53 2 10 122 12 124 8.95e-35 126
MS.gene016911.t1 AT5G65230 48.438 128 64 2 4 130 6 132 9.07e-35 127
MS.gene016911.t1 AT5G40350 51.887 106 50 1 8 113 15 119 1.29e-34 124
MS.gene016911.t1 AT5G10280 49.167 120 59 2 11 129 13 131 1.33e-34 127
MS.gene016911.t1 AT4G05100 53.097 113 51 2 11 122 14 125 2.48e-34 126
MS.gene016911.t1 AT5G16770 46.667 120 62 2 11 129 13 131 3.89e-34 126
MS.gene016911.t1 AT5G16770 46.667 120 62 2 11 129 13 131 3.89e-34 126
MS.gene016911.t1 AT5G16770 46.667 120 62 2 11 129 13 131 7.89e-34 125
MS.gene016911.t1 AT5G16770 46.667 120 62 2 11 129 13 131 7.89e-34 125
MS.gene016911.t1 AT2G16720 42.857 133 74 2 9 140 11 142 1.19e-33 123
MS.gene016911.t1 AT3G23250 50.000 106 51 2 11 115 13 117 1.49e-33 123
MS.gene016911.t1 AT4G37780 51.786 112 50 3 10 118 12 122 1.67e-33 124
MS.gene016911.t1 AT1G74080 46.825 126 65 2 11 135 13 137 1.97e-33 124
MS.gene016911.t1 AT5G15310 45.600 125 66 2 11 134 13 136 1.99e-33 122
MS.gene016911.t1 AT3G49690 55.140 107 46 2 8 113 10 115 2.17e-33 123
MS.gene016911.t1 AT3G01140 42.963 135 75 2 8 141 10 143 3.49e-33 124
MS.gene016911.t1 AT3G01140 42.963 135 75 2 8 141 53 186 4.04e-33 124
MS.gene016911.t1 AT5G52600 43.885 139 67 3 8 136 10 147 4.55e-33 120
MS.gene016911.t1 AT5G15310 45.600 125 66 2 11 134 13 136 5.32e-33 123
MS.gene016911.t1 AT3G27920 51.456 103 49 1 11 113 15 116 5.53e-33 120
MS.gene016911.t1 AT5G15310 45.600 125 66 2 11 134 13 136 6.31e-33 122
MS.gene016911.t1 AT5G16600 47.692 130 64 3 11 139 13 139 7.83e-33 122
MS.gene016911.t1 AT5G14750 43.165 139 73 3 11 146 17 152 8.25e-33 119
MS.gene016911.t1 AT5G12870 52.336 107 50 1 11 117 19 124 8.90e-33 121
MS.gene016911.t1 AT5G61420 46.552 116 60 2 11 125 13 127 1.02e-32 123
MS.gene016911.t1 AT3G02940 45.833 120 63 2 11 129 13 131 1.09e-32 122
MS.gene016911.t1 AT1G56160 50.962 104 50 1 10 113 14 116 1.18e-32 121
MS.gene016911.t1 AT3G01530 52.475 101 47 1 10 110 25 124 1.38e-32 119
MS.gene016911.t1 AT3G02940 45.833 120 63 2 11 129 13 131 2.13e-32 121
MS.gene016911.t1 AT3G02940 45.833 120 63 2 11 129 13 131 2.13e-32 121
MS.gene016911.t1 AT4G17785 50.000 114 55 2 10 122 13 125 2.15e-32 122
MS.gene016911.t1 AT4G17785 50.000 114 55 2 10 122 13 125 2.16e-32 122
MS.gene016911.t1 AT3G13890 50.000 104 51 1 10 113 12 114 2.50e-32 122
MS.gene016911.t1 AT3G08500 50.485 103 50 1 11 113 31 132 2.54e-32 121
MS.gene016911.t1 AT5G65790 55.140 107 46 2 8 113 10 115 2.58e-32 122
MS.gene016911.t1 AT1G79180 42.759 145 75 3 10 147 14 157 2.68e-32 120
MS.gene016911.t1 AT4G01680 42.953 149 68 4 11 143 13 160 2.93e-32 121
MS.gene016911.t1 AT5G40330 48.544 103 52 1 11 113 13 114 3.39e-32 118
MS.gene016911.t1 AT5G07690 47.414 116 59 2 11 125 13 127 4.44e-32 120
MS.gene016911.t1 AT1G16490 50.000 104 51 1 10 113 14 116 4.53e-32 119
MS.gene016911.t1 AT3G12820 48.649 111 55 2 8 117 12 121 5.16e-32 118
MS.gene016911.t1 AT5G07700 46.552 116 60 2 11 125 13 127 5.17e-32 120
MS.gene016911.t1 AT5G07700 46.552 116 60 2 11 125 13 127 5.17e-32 120
MS.gene016911.t1 AT5G57620 53.571 112 49 3 8 117 10 120 6.12e-32 120
MS.gene016911.t1 AT1G34670 49.558 113 55 2 11 122 13 124 7.86e-32 120
MS.gene016911.t1 AT1G66230 46.825 126 61 3 11 131 13 137 1.02e-31 118
MS.gene016911.t1 AT1G74430 44.248 113 61 2 11 122 13 124 1.03e-31 118
MS.gene016911.t1 AT5G14340 46.552 116 60 2 11 125 25 139 1.46e-31 118
MS.gene016911.t1 AT3G28470 52.000 100 47 1 10 109 12 110 1.66e-31 119
MS.gene016911.t1 AT5G60890 46.552 116 60 2 11 125 13 127 1.77e-31 118
MS.gene016911.t1 AT3G13540 40.000 135 72 3 11 137 24 157 1.81e-31 117
MS.gene016911.t1 AT1G68320 46.729 107 56 1 11 117 20 125 1.87e-31 118
MS.gene016911.t1 AT2G31180 45.045 111 60 1 10 120 12 121 2.19e-31 117
MS.gene016911.t1 AT4G22680 42.208 154 83 4 10 159 12 163 2.50e-31 117
MS.gene016911.t1 AT5G23000 53.333 105 47 2 10 113 12 115 2.52e-31 118
MS.gene016911.t1 AT1G63910 47.826 115 58 2 3 116 5 118 2.83e-31 119
MS.gene016911.t1 AT1G48000 48.113 106 54 1 11 116 33 137 2.96e-31 116
MS.gene016911.t1 AT1G18710 42.982 114 63 2 11 123 13 125 3.09e-31 117
MS.gene016911.t1 AT1G06180 50.485 103 50 1 11 113 13 114 3.11e-31 116
MS.gene016911.t1 AT2G47190 47.664 107 55 1 10 116 20 125 4.13e-31 117
MS.gene016911.t1 AT5G62320 44.118 136 67 3 11 138 14 148 7.70e-31 115
MS.gene016911.t1 AT1G25340 45.455 110 59 1 8 117 16 124 8.48e-31 116
MS.gene016911.t1 AT2G36890 47.009 117 60 2 8 123 10 125 1.89e-30 115
MS.gene016911.t1 AT1G74650 47.115 104 54 1 10 113 12 114 2.72e-30 115
MS.gene016911.t1 AT2G36890 47.009 117 60 2 8 123 51 166 3.29e-30 115
MS.gene016911.t1 AT3G28910 49.074 108 53 2 10 116 12 118 3.49e-30 115
MS.gene016911.t1 AT4G13480 50.000 106 52 1 11 116 7 111 5.61e-30 113
MS.gene016911.t1 AT3G47600 48.148 108 54 2 10 116 12 118 6.19e-30 115
MS.gene016911.t1 AT1G08810 49.533 107 52 2 11 116 13 118 6.90e-30 114
MS.gene016911.t1 AT3G60460 47.222 108 55 2 10 116 11 117 9.50e-30 114
MS.gene016911.t1 AT5G62470 48.148 108 54 2 10 116 12 118 1.34e-29 114
MS.gene016911.t1 AT5G59780 47.368 114 56 2 11 121 9 121 1.71e-29 111
MS.gene016911.t1 AT3G24310 48.113 106 54 1 11 116 19 123 1.81e-29 112
MS.gene016911.t1 AT3G13890 46.018 113 51 2 10 113 12 123 2.15e-29 114
MS.gene016911.t1 AT2G47460 49.524 105 51 2 11 114 13 116 2.22e-29 114
MS.gene016911.t1 AT3G30210 47.170 106 55 1 11 116 28 132 4.41e-29 111
MS.gene016911.t1 AT3G62610 48.571 105 52 2 11 114 13 116 4.58e-29 112
MS.gene016911.t1 AT3G46130 46.491 114 57 2 11 121 10 122 6.54e-29 110
MS.gene016911.t1 AT5G49330 47.475 99 51 1 11 109 13 110 1.46e-28 111
MS.gene016911.t1 AT5G62470 48.148 108 53 3 10 116 12 117 2.57e-28 111
MS.gene016911.t1 AT5G35550 46.078 102 54 1 12 113 16 116 3.25e-28 108
MS.gene016911.t1 AT3G53200 48.544 103 52 1 11 113 10 111 3.29e-28 108
MS.gene016911.t1 AT4G12350 47.788 113 57 2 10 121 12 123 4.26e-28 109
MS.gene016911.t1 AT4G18770 50.000 102 49 2 12 113 217 316 2.24e-27 109
MS.gene016911.t1 AT1G79180 35.393 178 74 4 10 147 14 190 5.56e-27 107
MS.gene016911.t1 AT3G06490 48.598 107 54 1 11 117 20 125 6.67e-27 106
MS.gene016911.t1 AT1G25340 42.727 110 57 2 8 117 16 119 1.53e-26 104
MS.gene016911.t1 AT1G25340 44.340 106 53 2 8 113 16 115 1.94e-26 105
MS.gene016911.t1 AT5G40360 48.544 103 51 2 12 114 158 258 2.64e-26 105
MS.gene016911.t1 AT1G56650 39.844 128 67 2 5 123 3 129 2.98e-26 103
MS.gene016911.t1 AT4G25560 46.602 103 54 1 11 113 11 112 3.56e-26 103
MS.gene016911.t1 AT5G26660 50.538 93 44 2 43 134 14 105 4.25e-26 104
MS.gene016911.t1 AT5G49620 46.296 108 57 1 10 117 26 132 4.31e-26 104
MS.gene016911.t1 AT5G52260 47.788 113 55 2 11 123 13 121 5.24e-26 103
MS.gene016911.t1 AT3G27785 43.363 113 62 2 5 117 182 292 1.33e-25 104
MS.gene016911.t1 AT1G66370 44.444 99 54 1 11 109 9 106 1.97e-25 101
MS.gene016911.t1 AT3G48920 44.660 103 56 1 11 113 19 120 2.15e-25 101
MS.gene016911.t1 AT1G66380 44.762 105 57 1 5 109 3 106 3.35e-25 97.8
MS.gene016911.t1 AT5G58850 48.624 109 52 3 6 113 99 204 1.13e-24 102
MS.gene016911.t1 AT5G49620 42.149 121 57 1 10 117 26 146 1.79e-24 100
MS.gene016911.t1 AT1G66390 43.119 109 61 1 5 113 3 110 3.17e-24 98.2
MS.gene016911.t1 AT3G50060 44.954 109 58 2 12 120 6 112 3.49e-24 99.0
MS.gene016911.t1 AT4G37260 46.364 110 56 3 12 120 13 120 1.19e-23 97.8
MS.gene016911.t1 AT2G25230 44.444 126 60 5 5 123 14 136 4.28e-23 94.7
MS.gene016911.t1 AT5G11050 47.573 103 50 3 12 113 105 204 5.13e-23 97.4
MS.gene016911.t1 AT5G40350 37.209 129 75 4 41 164 3 130 6.02e-23 92.4
MS.gene016911.t1 AT5G67300 48.544 103 50 3 12 113 6 106 6.66e-23 95.5
MS.gene016911.t1 AT2G23290 47.573 103 51 3 12 113 13 113 6.86e-23 95.9
MS.gene016911.t1 AT3G27810 53.333 75 34 1 43 117 4 77 6.88e-23 92.8
MS.gene016911.t1 AT3G55730 46.078 102 53 2 12 113 56 155 1.04e-22 96.7
MS.gene016911.t1 AT1G17950 30.457 197 122 7 12 202 5 192 1.74e-22 93.6
MS.gene016911.t1 AT3G09230 44.118 102 55 2 12 113 55 154 2.79e-22 95.1
MS.gene016911.t1 AT3G53200 56.338 71 30 1 43 113 9 78 3.52e-22 91.7
MS.gene016911.t1 AT2G39880 48.039 102 51 2 12 113 50 149 5.77e-22 94.0
MS.gene016911.t1 AT5G17800 38.060 134 78 3 12 142 93 224 7.70e-22 93.2
MS.gene016911.t1 AT1G69560 42.453 106 57 3 5 109 116 218 9.06e-22 93.2
MS.gene016911.t1 AT1G69560 40.952 105 60 2 5 109 100 202 1.03e-21 92.8
MS.gene016911.t1 AT4G32730 44.118 102 55 2 12 113 87 186 2.65e-21 93.6
MS.gene016911.t1 AT4G32730 34.906 106 68 1 3 108 26 130 4.13e-15 75.5
MS.gene016911.t1 AT4G32730 44.118 102 55 2 12 113 87 186 2.65e-21 93.6
MS.gene016911.t1 AT4G32730 34.906 106 68 1 3 108 26 130 4.13e-15 75.5
MS.gene016911.t1 AT4G32730 44.118 102 55 2 12 113 87 186 2.65e-21 93.6
MS.gene016911.t1 AT4G32730 34.906 106 68 1 3 108 26 130 4.13e-15 75.5
MS.gene016911.t1 AT4G32730 44.118 102 55 2 12 113 87 186 2.65e-21 93.6
MS.gene016911.t1 AT4G32730 34.906 106 68 1 3 108 26 130 4.13e-15 75.5
MS.gene016911.t1 AT4G32730 41.880 117 65 3 12 127 87 201 2.91e-21 93.6
MS.gene016911.t1 AT4G32730 34.906 106 68 1 3 108 26 130 4.80e-15 75.1
MS.gene016911.t1 AT3G46130 50.000 84 38 2 41 121 8 90 5.93e-21 89.0
MS.gene016911.t1 AT4G33450 39.623 106 59 3 11 113 18 121 6.12e-21 89.4
MS.gene016911.t1 AT3G12820 52.703 74 33 2 45 117 1 73 6.22e-21 87.8
MS.gene016911.t1 AT1G73410 35.119 168 89 6 12 165 6 167 1.12e-20 87.4
MS.gene016911.t1 AT5G59780 51.220 82 36 2 43 121 20 100 1.31e-20 87.4
MS.gene016911.t1 AT1G73410 42.609 115 58 4 12 121 6 117 1.44e-20 88.2
MS.gene016911.t1 AT3G46130 51.220 82 36 2 43 121 20 100 2.06e-20 87.4
MS.gene016911.t1 AT5G14750 40.000 105 57 3 45 146 17 118 5.16e-20 84.7
MS.gene016911.t1 AT1G26780 42.424 99 53 3 12 109 98 193 6.23e-20 87.0
MS.gene016911.t1 AT5G11510 40.196 102 59 2 12 113 81 180 6.47e-20 89.7
MS.gene016911.t1 AT5G11510 33.019 106 70 1 3 108 20 124 6.86e-14 71.6
MS.gene016911.t1 AT5G11510 40.196 102 59 2 12 113 81 180 6.47e-20 89.7
MS.gene016911.t1 AT5G11510 33.019 106 70 1 3 108 20 124 6.86e-14 71.6
MS.gene016911.t1 AT5G11510 40.196 102 59 2 12 113 81 180 6.47e-20 89.7
MS.gene016911.t1 AT5G11510 33.019 106 70 1 3 108 20 124 6.86e-14 71.6
MS.gene016911.t1 AT5G11510 40.196 102 59 2 12 113 81 180 6.83e-20 89.4
MS.gene016911.t1 AT5G11510 33.019 106 70 1 3 108 20 124 6.80e-14 71.6
MS.gene016911.t1 AT5G11510 40.196 102 59 2 12 113 81 180 7.16e-20 89.4
MS.gene016911.t1 AT5G11510 33.019 106 70 1 3 108 20 124 7.19e-14 71.6
MS.gene016911.t1 AT3G09370 41.176 102 58 2 12 113 135 234 7.95e-20 89.0
MS.gene016911.t1 AT3G09370 39.175 97 58 1 12 108 83 178 2.07e-15 75.9
MS.gene016911.t1 AT2G37630 42.857 119 64 3 15 131 7 123 8.07e-20 88.2
MS.gene016911.t1 AT3G09370 28.972 214 138 6 12 217 143 350 8.56e-20 89.0
MS.gene016911.t1 AT3G09370 39.175 97 58 1 12 108 91 186 2.28e-15 75.9
MS.gene016911.t1 AT3G09370 28.972 214 138 6 12 217 130 337 8.73e-20 89.0
MS.gene016911.t1 AT3G09370 39.175 97 58 1 12 108 78 173 2.49e-15 75.9
MS.gene016911.t1 AT1G26780 40.952 105 57 3 12 113 98 200 8.80e-20 87.8
MS.gene016911.t1 AT5G02320 41.905 105 58 3 12 115 127 229 1.22e-19 88.6
MS.gene016911.t1 AT5G02320 38.144 97 59 1 12 108 75 170 8.72e-15 74.3
MS.gene016911.t1 AT5G02320 41.905 105 58 3 12 115 127 229 1.22e-19 88.6
MS.gene016911.t1 AT5G02320 38.144 97 59 1 12 108 75 170 8.72e-15 74.3
MS.gene016911.t1 AT5G02320 41.905 105 58 3 12 115 67 169 1.50e-19 88.2
MS.gene016911.t1 AT5G02320 38.144 97 59 1 12 108 15 110 1.03e-14 73.9
MS.gene016911.t1 AT5G35550 50.704 71 34 1 43 113 50 119 1.46e-18 83.2
MS.gene016911.t1 AT3G29020 38.095 105 63 2 5 109 58 160 1.81e-18 82.4
MS.gene016911.t1 AT3G29020 36.752 117 71 3 5 120 60 174 2.07e-18 83.2
MS.gene016911.t1 AT3G47600 49.333 75 36 2 43 116 39 112 2.37e-18 83.6
MS.gene016911.t1 AT5G40430 39.669 121 63 5 4 118 41 157 3.43e-18 82.0
MS.gene016911.t1 AT4G00540 40.909 110 59 4 11 116 102 209 4.03e-18 83.6
MS.gene016911.t1 AT4G00540 40.909 110 59 4 11 116 100 207 5.31e-18 83.2
MS.gene016911.t1 AT1G66380 47.761 67 35 0 6 72 4 70 3.51e-16 72.8
MS.gene016911.t1 AT1G66380 50.000 68 33 1 42 109 7 73 4.74e-16 72.4
MS.gene016911.t1 AT3G18100 40.816 98 56 2 10 107 544 639 3.65e-15 75.5
MS.gene016911.t1 AT3G18100 40.816 98 56 2 10 107 496 591 3.80e-15 75.5
MS.gene016911.t1 AT3G18100 40.816 98 56 2 10 107 383 478 5.61e-15 74.7
MS.gene016911.t1 AT3G18100 40.816 98 56 2 10 107 331 426 6.27e-15 74.7
MS.gene016911.t1 AT1G14350 35.922 103 64 2 14 116 27 127 2.19e-14 72.8
MS.gene016911.t1 AT1G14350 35.922 103 64 2 14 116 27 127 2.19e-14 72.8
MS.gene016911.t1 AT1G22640 46.479 71 36 2 57 126 2 71 2.88e-14 70.1
MS.gene016911.t1 AT1G18960 35.000 120 71 5 1 119 1 114 5.61e-14 70.9
MS.gene016911.t1 AT2G02820 34.951 103 65 2 14 116 32 132 1.22e-13 70.9
MS.gene016911.t1 AT2G02820 34.951 103 65 2 14 116 32 132 1.43e-13 70.5
MS.gene016911.t1 AT2G02820 36.957 92 56 2 14 105 32 121 3.34e-13 68.9
MS.gene016911.t1 AT5G39700 36.364 99 61 2 11 109 55 151 8.88e-13 65.9

Find 50 sgRNAs with CRISPR-Local

Find 71 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATACCTCGTTCCAATTTC+TGG 0.107867 5.2:-75196991 None:intergenic
TAATATTTCATCTTCTTCTT+TGG 0.201233 5.2:-75196943 None:intergenic
GATTTCAGGGGTAGCATTAT+TGG 0.227047 5.2:+75197520 MS.gene016911:CDS
CCTACAACCAGATGTGAAAA+AGG 0.249095 5.2:+75197070 MS.gene016911:CDS
ATGTATTGACTTCAGTAATT+TGG 0.259715 5.2:+75197732 MS.gene016911:CDS
TCAGTATCATGGTGACTTTA+TGG 0.269513 5.2:+75197624 MS.gene016911:CDS
ATAATGACATCAAGAACTTT+TGG 0.308735 5.2:+75197314 MS.gene016911:CDS
CTTGTGAATCCTCAACTTGT+TGG 0.318952 5.2:-75197420 None:intergenic
AAAACCATGGAACCAGAAAT+TGG 0.371902 5.2:+75196979 MS.gene016911:CDS
AAACCTCCTTGATGACTTCA+TGG 0.396227 5.2:+75197699 MS.gene016911:CDS
ATGTCATTATCGCTTCTTCC+CGG 0.399929 5.2:-75197301 None:intergenic
CGTTCCAATTTCTGGTTCCA+TGG 0.417198 5.2:-75196983 None:intergenic
TCATCCGGTTCCATCTTGTC+AGG 0.436579 5.2:-75197382 None:intergenic
TCCTCAAATTCCACCACCTA+TGG 0.442042 5.2:+75197597 MS.gene016911:CDS
GGATAGTCACCAAGCATCAT+AGG 0.444307 5.2:-75197577 None:intergenic
TGAAATATTAAAAGCATATG+TGG 0.459693 5.2:+75196956 MS.gene016911:CDS
TCCATAGGTGGTGGAATTTG+AGG 0.460831 5.2:-75197598 None:intergenic
AAAAGTATGGTGAATTCAAA+TGG 0.466521 5.2:+75197138 MS.gene016911:CDS
CTACTATTCAACTCATCATC+CGG 0.471736 5.2:-75197397 None:intergenic
TGGAACTTCTCATATACCTA+TGG 0.477216 5.2:+75197540 MS.gene016911:CDS
CTTCCTTCACCTATGATGCT+TGG 0.481674 5.2:+75197568 MS.gene016911:CDS
GTCACCCTTCCCTGACAAGA+TGG 0.495250 5.2:+75197372 MS.gene016911:CDS
GTAAAAGTTGTCGTCTAAGA+TGG 0.497716 5.2:+75197039 MS.gene016911:CDS
TATTGACTTCAGTAATTTGG+AGG 0.499792 5.2:+75197735 MS.gene016911:CDS
CGGTTCCATCTTGTCAGGGA+AGG 0.508810 5.2:-75197377 None:intergenic
CTTCCCTGACAAGATGGAAC+CGG 0.509188 5.2:+75197378 MS.gene016911:CDS
CAAATGGTCTAAGCTGGCTC+AGG 0.526373 5.2:+75197154 MS.gene016911:CDS
TTGGAGGACGATGTTGAAGC+CGG 0.528092 5.2:+75197751 MS.gene016911:CDS
TACTGAGTCTCCATAGGTGG+TGG 0.534844 5.2:-75197607 None:intergenic
GAATAGTAGCCAACAAGTTG+AGG 0.541704 5.2:+75197411 MS.gene016911:CDS
TGAATTCAAATGGTCTAAGC+TGG 0.550324 5.2:+75197148 MS.gene016911:CDS
CATGATGTCTTCATCATCAT+CGG 0.552981 5.2:+75196896 None:intergenic
ATGGTCTAAGCTGGCTCAGG+AGG 0.563124 5.2:+75197157 MS.gene016911:CDS
AGCATCATAGGTGAAGGAAG+TGG 0.575321 5.2:-75197565 None:intergenic
CCTATGGAGACTCAGTATCA+TGG 0.585538 5.2:+75197613 MS.gene016911:CDS
CCATGATACTGAGTCTCCAT+AGG 0.586617 5.2:-75197613 None:intergenic
GGTGAAGGAAGTGGAGCCAT+AGG 0.590422 5.2:-75197556 None:intergenic
ATGGATCCATGAAGTCATCA+AGG 0.595005 5.2:-75197705 None:intergenic
TCACCAAGCATCATAGGTGA+AGG 0.597667 5.2:-75197571 None:intergenic
GGTTCCATCTTGTCAGGGAA+GGG 0.605286 5.2:-75197376 None:intergenic
AAAAGAAAACTTGAAAAGCG+TGG 0.617466 5.2:+75197346 MS.gene016911:CDS
CTGAAGTCAATACATAGACA+TGG 0.618549 5.2:-75197724 None:intergenic
AAAGCATATGTGGAAAACCA+TGG 0.619332 5.2:+75196966 MS.gene016911:CDS
CATCCGGTTCCATCTTGTCA+GGG 0.638065 5.2:-75197381 None:intergenic
GAGGACGATGTTGAAGCCGG+CGG 0.660817 5.2:+75197754 MS.gene016911:CDS
ACTGTCAAATAAACGACCGC+CGG 0.667707 5.2:-75197770 None:intergenic
TGATACTGAGTCTCCATAGG+TGG 0.687296 5.2:-75197610 None:intergenic
AATGCGGGGCTTATACGTTG+CGG 0.693414 5.2:+75197017 MS.gene016911:CDS
GATCCATGAAGTCATCAAGG+AGG 0.752147 5.2:-75197702 None:intergenic
TGGAACCAGAAATTGGAACG+AGG 0.771577 5.2:+75196986 MS.gene016911:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTCTAAATTTCAATTG+TGG - chr5.2:75197463-75197482 None:intergenic 15.0%
!! TAATATTTCATCTTCTTCTT+TGG - chr5.2:75196946-75196965 None:intergenic 20.0%
!!! ATGAAAAACTTTTAGATTTC+AGG + chr5.2:75197506-75197525 MS.gene016911:CDS 20.0%
!!! TGAAAAACTTTTAGATTTCA+GGG + chr5.2:75197507-75197526 MS.gene016911:CDS 20.0%
!!! TGAAATATTAAAAGCATATG+TGG + chr5.2:75196956-75196975 MS.gene016911:CDS 20.0%
!!! TTTGAGTTCTATAAAAAGTA+TGG + chr5.2:75197125-75197144 MS.gene016911:CDS 20.0%
! AACAAAATAATCAACACAAG+TGG - chr5.2:75197239-75197258 None:intergenic 25.0%
! TTCATCTCATCAAAAATTGA+TGG - chr5.2:75197487-75197506 None:intergenic 25.0%
!! AAAAGTATGGTGAATTCAAA+TGG + chr5.2:75197138-75197157 MS.gene016911:CDS 25.0%
!! ATAATGACATCAAGAACTTT+TGG + chr5.2:75197314-75197333 MS.gene016911:CDS 25.0%
!! GAAAAACTTTTAGATTTCAG+GGG + chr5.2:75197508-75197527 MS.gene016911:CDS 25.0%
!!! ATGTATTGACTTCAGTAATT+TGG + chr5.2:75197732-75197751 MS.gene016911:CDS 25.0%
!!! CTTTTTTCTTCTTCACTAAA+TGG - chr5.2:75197098-75197117 None:intergenic 25.0%
AAAAGAAAACTTGAAAAGCG+TGG + chr5.2:75197346-75197365 MS.gene016911:CDS 30.0%
CAAGTGGTGAATATTATAGA+AGG - chr5.2:75197223-75197242 None:intergenic 30.0%
CCTATACTAAAAAAGGAACA+TGG + chr5.2:75196919-75196938 MS.gene016911:CDS 30.0%
! ACTTTATGGATCCAGATTTT+TGG + chr5.2:75197638-75197657 MS.gene016911:CDS 30.0%
!! TATTGACTTCAGTAATTTGG+AGG + chr5.2:75197735-75197754 MS.gene016911:CDS 30.0%
!!! CCATGTTCCTTTTTTAGTAT+AGG - chr5.2:75196922-75196941 None:intergenic 30.0%
AAAACCATGGAACCAGAAAT+TGG + chr5.2:75196979-75196998 MS.gene016911:CDS 35.0%
AAAGCATATGTGGAAAACCA+TGG + chr5.2:75196966-75196985 MS.gene016911:CDS 35.0%
CTACAACCAGATGTGAAAAA+GGG + chr5.2:75197071-75197090 MS.gene016911:CDS 35.0%
CTACTATTCAACTCATCATC+CGG - chr5.2:75197400-75197419 None:intergenic 35.0%
CTGAAGTCAATACATAGACA+TGG - chr5.2:75197727-75197746 None:intergenic 35.0%
CTGTTGTGTAACCAAAAATC+TGG - chr5.2:75197652-75197671 None:intergenic 35.0%
GTAAAAGTTGTCGTCTAAGA+TGG + chr5.2:75197039-75197058 MS.gene016911:CDS 35.0%
TCAGTATCATGGTGACTTTA+TGG + chr5.2:75197624-75197643 MS.gene016911:CDS 35.0%
TCATCGGCCTATACTAAAAA+AGG + chr5.2:75196912-75196931 MS.gene016911:CDS 35.0%
TGAATTCAAATGGTCTAAGC+TGG + chr5.2:75197148-75197167 MS.gene016911:CDS 35.0%
TGGAACTTCTCATATACCTA+TGG + chr5.2:75197540-75197559 MS.gene016911:CDS 35.0%
! AACGAGGTATCAAAAAATGC+GGG + chr5.2:75197002-75197021 MS.gene016911:CDS 35.0%
! GAACGAGGTATCAAAAAATG+CGG + chr5.2:75197001-75197020 MS.gene016911:CDS 35.0%
! GTTCTTTTTGTGTCAGTTAC+CGG + chr5.2:75197282-75197301 MS.gene016911:intron 35.0%
! TTCTTTTTGTGTCAGTTACC+GGG + chr5.2:75197283-75197302 MS.gene016911:intron 35.0%
ATGGATCCATGAAGTCATCA+AGG - chr5.2:75197708-75197727 None:intergenic 40.0%
ATGTCATTATCGCTTCTTCC+CGG - chr5.2:75197304-75197323 None:intergenic 40.0%
CCTACAACCAGATGTGAAAA+AGG + chr5.2:75197070-75197089 MS.gene016911:CDS 40.0%
CTTGTGAATCCTCAACTTGT+TGG - chr5.2:75197423-75197442 None:intergenic 40.0%
GAATAGTAGCCAACAAGTTG+AGG + chr5.2:75197411-75197430 MS.gene016911:CDS 40.0%
GATTTCAGGGGTAGCATTAT+TGG + chr5.2:75197520-75197539 MS.gene016911:CDS 40.0%
TGATACCTCGTTCCAATTTC+TGG - chr5.2:75196994-75197013 None:intergenic 40.0%
! AAACCTCCTTGATGACTTCA+TGG + chr5.2:75197699-75197718 MS.gene016911:CDS 40.0%
! ACGAGGTATCAAAAAATGCG+GGG + chr5.2:75197003-75197022 MS.gene016911:CDS 40.0%
!! AATGGACCCTTTTTCACATC+TGG - chr5.2:75197080-75197099 None:intergenic 40.0%
!! CCTTTTTCACATCTGGTTGT+AGG - chr5.2:75197073-75197092 None:intergenic 40.0%
ACTGTCAAATAAACGACCGC+CGG - chr5.2:75197773-75197792 None:intergenic 45.0%
AGCATCATAGGTGAAGGAAG+TGG - chr5.2:75197568-75197587 None:intergenic 45.0%
CCATGATACTGAGTCTCCAT+AGG - chr5.2:75197616-75197635 None:intergenic 45.0%
CCTATGGAGACTCAGTATCA+TGG + chr5.2:75197613-75197632 MS.gene016911:CDS 45.0%
CTTCCTTCACCTATGATGCT+TGG + chr5.2:75197568-75197587 MS.gene016911:CDS 45.0%
GATCCATGAAGTCATCAAGG+AGG - chr5.2:75197705-75197724 None:intergenic 45.0%
GGATAGTCACCAAGCATCAT+AGG - chr5.2:75197580-75197599 None:intergenic 45.0%
TCACCAAGCATCATAGGTGA+AGG - chr5.2:75197574-75197593 None:intergenic 45.0%
TCCTCAAATTCCACCACCTA+TGG + chr5.2:75197597-75197616 MS.gene016911:CDS 45.0%
TGATACTGAGTCTCCATAGG+TGG - chr5.2:75197613-75197632 None:intergenic 45.0%
TGGAACCAGAAATTGGAACG+AGG + chr5.2:75196986-75197005 MS.gene016911:CDS 45.0%
!! CGTTCCAATTTCTGGTTCCA+TGG - chr5.2:75196986-75197005 None:intergenic 45.0%
!! TCCATAGGTGGTGGAATTTG+AGG - chr5.2:75197601-75197620 None:intergenic 45.0%
AATGCGGGGCTTATACGTTG+CGG + chr5.2:75197017-75197036 MS.gene016911:CDS 50.0%
CATCCGGTTCCATCTTGTCA+GGG - chr5.2:75197384-75197403 None:intergenic 50.0%
CTTCCCTGACAAGATGGAAC+CGG + chr5.2:75197378-75197397 MS.gene016911:CDS 50.0%
GGTTCCATCTTGTCAGGGAA+GGG - chr5.2:75197379-75197398 None:intergenic 50.0%
TACTGAGTCTCCATAGGTGG+TGG - chr5.2:75197610-75197629 None:intergenic 50.0%
TCATCCGGTTCCATCTTGTC+AGG - chr5.2:75197385-75197404 None:intergenic 50.0%
TTGGAGGACGATGTTGAAGC+CGG + chr5.2:75197751-75197770 MS.gene016911:CDS 50.0%
! CAAATGGTCTAAGCTGGCTC+AGG + chr5.2:75197154-75197173 MS.gene016911:CDS 50.0%
CGGTTCCATCTTGTCAGGGA+AGG - chr5.2:75197380-75197399 None:intergenic 55.0%
GGTGAAGGAAGTGGAGCCAT+AGG - chr5.2:75197559-75197578 None:intergenic 55.0%
GTCACCCTTCCCTGACAAGA+TGG + chr5.2:75197372-75197391 MS.gene016911:CDS 55.0%
! ATGGTCTAAGCTGGCTCAGG+AGG + chr5.2:75197157-75197176 MS.gene016911:CDS 55.0%
GAGGACGATGTTGAAGCCGG+CGG + chr5.2:75197754-75197773 MS.gene016911:CDS 60.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 75196897 75197813 75196897 ID=MS.gene016911
chr5.2 mRNA 75196897 75197813 75196897 ID=MS.gene016911.t1;Parent=MS.gene016911
chr5.2 exon 75196897 75197178 75196897 ID=MS.gene016911.t1.exon1;Parent=MS.gene016911.t1
chr5.2 CDS 75196897 75197178 75196897 ID=cds.MS.gene016911.t1;Parent=MS.gene016911.t1
chr5.2 exon 75197298 75197813 75197298 ID=MS.gene016911.t1.exon2;Parent=MS.gene016911.t1
chr5.2 CDS 75197298 75197813 75197298 ID=cds.MS.gene016911.t1;Parent=MS.gene016911.t1
Gene Sequence

>MS.gene016911

ATGATGTCTTCATCATCATCGGCCTATACTAAAAAAGGAACATGGTCCAAAGAAGAAGATGAAATATTAAAAGCATATGTGGAAAACCATGGAACCAGAAATTGGAACGAGGTATCAAAAAATGCGGGGCTTATACGTTGCGGTAAAAGTTGTCGTCTAAGATGGTATAATCACCTACAACCAGATGTGAAAAAGGGTCCATTTAGTGAAGAAGAAAAAAGAAAAGTTTTTGAGTTCTATAAAAAGTATGGTGAATTCAAATGGTCTAAGCTGGCTCAGGAGGTAACTTCTTTTACTTTCTTTAATTTGAAATATTGATCTATCCTTCTATAATATTCACCACTTGTGTTGATTATTTTGTTGATCATGTCATTAATTTGTATTTGTTCTTTTTGTGTCAGTTACCGGGAAGAAGCGATAATGACATCAAGAACTTTTGGAATGCGAGAAAAAGAAAACTTGAAAAGCGTGGCTTGTCACCCTTCCCTGACAAGATGGAACCGGATGATGAGTTGAATAGTAGCCAACAAGTTGAGGATTCACAAGAAGATGAATTTAATATACCACAATTGAAATTTAGAAAATATCCATCAATTTTTGATGAGATGAATGAAAAACTTTTAGATTTCAGGGGTAGCATTATTGGAACTTCTCATATACCTATGGCTCCACTTCCTTCACCTATGATGCTTGGTGACTATCCTCAAATTCCACCACCTATGGAGACTCAGTATCATGGTGACTTTATGGATCCAGATTTTTGGTTACACAACAGTTCATTAGACAATGACGATGCTGAAGCAAACCTCCTTGATGACTTCATGGATCCATGTCTATGTATTGACTTCAGTAATTTGGAGGACGATGTTGAAGCCGGCGGTCGTTTATTTGACAGTAACTTGCATGACAAGATATAA
Protein sequence

>MS.gene016911.t1

MMSSSSSAYTKKGTWSKEEDEILKAYVENHGTRNWNEVSKNAGLIRCGKSCRLRWYNHLQPDVKKGPFSEEEKRKVFEFYKKYGEFKWSKLAQELPGRSDNDIKNFWNARKRKLEKRGLSPFPDKMEPDDELNSSQQVEDSQEDEFNIPQLKFRKYPSIFDEMNEKLLDFRGSIIGTSHIPMAPLPSPMMLGDYPQIPPPMETQYHGDFMDPDFWLHNSSLDNDDAEANLLDDFMDPCLCIDFSNLEDDVEAGGRLFDSNLHDKI