Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016955.t1 | XP_024640189.1 | 80.3 | 680 | 17 | 1 | 1 | 563 | 1 | 680 | 0.00E+00 | 1090.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016955.t1 | Q9SZL8 | 37.1 | 275 | 167 | 3 | 193 | 466 | 365 | 634 | 8.2e-48 | 193.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016955.t1 | A0A396HW08 | 80.3 | 680 | 17 | 1 | 1 | 563 | 1 | 680 | 0.0e+00 | 1090.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene016955.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016955.t1 | MTR_0856s0010 | 61.250 | 160 | 52 | 2 | 1 | 150 | 1 | 160 | 2.19e-58 | 194 |
| MS.gene016955.t1 | MTR_5g089200 | 70.423 | 71 | 13 | 1 | 592 | 654 | 233 | 303 | 8.25e-20 | 94.0 |
| MS.gene016955.t1 | MTR_5g089280 | 67.606 | 71 | 15 | 1 | 592 | 654 | 241 | 311 | 4.01e-19 | 91.7 |
| MS.gene016955.t1 | MTR_5g089280 | 67.606 | 71 | 15 | 1 | 592 | 654 | 241 | 311 | 4.26e-19 | 91.7 |
| MS.gene016955.t1 | MTR_6g022070 | 29.412 | 153 | 102 | 3 | 198 | 348 | 1 | 149 | 2.25e-14 | 75.5 |
| MS.gene016955.t1 | MTR_7g074790 | 26.471 | 170 | 107 | 5 | 22 | 187 | 3 | 158 | 4.46e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016955.t1 | AT4G38180 | 37.091 | 275 | 167 | 3 | 193 | 466 | 365 | 634 | 7.40e-53 | 195 |
| MS.gene016955.t1 | AT4G15090 | 31.579 | 361 | 225 | 6 | 193 | 547 | 341 | 685 | 1.04e-50 | 189 |
| MS.gene016955.t1 | AT4G15090 | 31.579 | 361 | 225 | 6 | 193 | 547 | 341 | 685 | 1.04e-50 | 189 |
| MS.gene016955.t1 | AT4G15090 | 31.579 | 361 | 225 | 6 | 193 | 547 | 341 | 685 | 1.04e-50 | 189 |
| MS.gene016955.t1 | AT4G15090 | 31.579 | 361 | 225 | 6 | 193 | 547 | 341 | 685 | 1.04e-50 | 189 |
| MS.gene016955.t1 | AT4G15090 | 31.579 | 361 | 225 | 6 | 193 | 547 | 341 | 685 | 1.04e-50 | 189 |
| MS.gene016955.t1 | AT1G52520 | 33.131 | 329 | 217 | 3 | 193 | 518 | 362 | 690 | 1.37e-50 | 187 |
| MS.gene016955.t1 | AT3G22170 | 32.787 | 305 | 194 | 3 | 205 | 508 | 362 | 656 | 6.54e-49 | 184 |
| MS.gene016955.t1 | AT3G22170 | 32.787 | 305 | 194 | 3 | 205 | 508 | 362 | 656 | 6.54e-49 | 184 |
| MS.gene016955.t1 | AT2G32250 | 32.523 | 329 | 208 | 6 | 193 | 518 | 285 | 602 | 4.71e-44 | 169 |
| MS.gene016955.t1 | AT2G32250 | 32.523 | 329 | 208 | 6 | 193 | 518 | 285 | 602 | 6.07e-44 | 169 |
| MS.gene016955.t1 | AT2G32250 | 32.523 | 329 | 208 | 6 | 193 | 518 | 285 | 602 | 6.07e-44 | 169 |
| MS.gene016955.t1 | AT2G32250 | 32.523 | 329 | 208 | 6 | 193 | 518 | 285 | 602 | 6.07e-44 | 169 |
| MS.gene016955.t1 | AT2G32250 | 32.523 | 329 | 208 | 6 | 193 | 518 | 285 | 602 | 6.18e-44 | 169 |
| MS.gene016955.t1 | AT2G32250 | 32.523 | 329 | 208 | 6 | 193 | 518 | 285 | 602 | 6.18e-44 | 169 |
| MS.gene016955.t1 | AT2G32250 | 32.523 | 329 | 208 | 6 | 193 | 518 | 244 | 561 | 7.01e-44 | 169 |
| MS.gene016955.t1 | AT2G32250 | 32.523 | 329 | 208 | 6 | 193 | 518 | 244 | 561 | 8.10e-44 | 168 |
| MS.gene016955.t1 | AT1G76320 | 32.326 | 331 | 208 | 6 | 193 | 518 | 278 | 597 | 9.67e-44 | 167 |
| MS.gene016955.t1 | AT1G76320 | 32.326 | 331 | 208 | 6 | 193 | 518 | 278 | 597 | 1.60e-43 | 167 |
| MS.gene016955.t1 | AT1G76320 | 32.326 | 331 | 208 | 6 | 193 | 518 | 278 | 597 | 1.93e-43 | 167 |
| MS.gene016955.t1 | AT1G76320 | 32.326 | 331 | 208 | 6 | 193 | 518 | 278 | 597 | 1.93e-43 | 167 |
| MS.gene016955.t1 | AT4G38170 | 31.618 | 272 | 180 | 3 | 196 | 466 | 133 | 399 | 9.12e-42 | 159 |
| MS.gene016955.t1 | AT3G06250 | 31.250 | 272 | 177 | 4 | 193 | 464 | 441 | 702 | 4.38e-37 | 148 |
| MS.gene016955.t1 | AT3G06250 | 31.250 | 272 | 177 | 4 | 193 | 464 | 441 | 702 | 4.38e-37 | 148 |
| MS.gene016955.t1 | AT3G06250 | 31.250 | 272 | 177 | 4 | 193 | 464 | 441 | 702 | 4.38e-37 | 148 |
| MS.gene016955.t1 | AT4G19990 | 30.195 | 308 | 202 | 5 | 188 | 492 | 229 | 526 | 1.75e-36 | 146 |
| MS.gene016955.t1 | AT4G19990 | 30.195 | 308 | 202 | 5 | 188 | 492 | 286 | 583 | 2.58e-36 | 145 |
| MS.gene016955.t1 | AT4G19990 | 30.195 | 308 | 202 | 5 | 188 | 492 | 286 | 583 | 2.58e-36 | 145 |
| MS.gene016955.t1 | AT4G19990 | 30.195 | 308 | 202 | 5 | 188 | 492 | 286 | 583 | 2.60e-36 | 145 |
| MS.gene016955.t1 | AT2G27110 | 29.781 | 319 | 211 | 6 | 193 | 508 | 312 | 620 | 2.62e-36 | 146 |
| MS.gene016955.t1 | AT2G27110 | 29.781 | 319 | 211 | 6 | 193 | 508 | 312 | 620 | 2.62e-36 | 146 |
| MS.gene016955.t1 | AT4G19990 | 30.195 | 308 | 202 | 5 | 188 | 492 | 300 | 597 | 3.01e-36 | 145 |
| MS.gene016955.t1 | AT2G27110 | 29.781 | 319 | 211 | 6 | 193 | 508 | 167 | 475 | 3.62e-36 | 145 |
| MS.gene016955.t1 | AT4G19990 | 30.065 | 306 | 205 | 4 | 188 | 492 | 286 | 583 | 3.72e-36 | 145 |
| MS.gene016955.t1 | AT4G19990 | 30.065 | 306 | 205 | 4 | 188 | 492 | 286 | 583 | 3.72e-36 | 145 |
| MS.gene016955.t1 | AT5G18960 | 29.932 | 294 | 195 | 5 | 193 | 485 | 465 | 748 | 6.66e-35 | 142 |
| MS.gene016955.t1 | AT5G18960 | 29.932 | 294 | 195 | 5 | 193 | 485 | 465 | 748 | 6.66e-35 | 142 |
| MS.gene016955.t1 | AT1G80010 | 28.159 | 277 | 196 | 3 | 193 | 467 | 387 | 662 | 2.62e-29 | 124 |
| MS.gene016955.t1 | AT1G10240 | 26.502 | 283 | 187 | 6 | 186 | 463 | 338 | 604 | 1.79e-25 | 112 |
| MS.gene016955.t1 | AT1G10240 | 26.502 | 283 | 187 | 6 | 186 | 463 | 338 | 604 | 1.79e-25 | 112 |
| MS.gene016955.t1 | AT5G28530 | 20.769 | 520 | 311 | 14 | 27 | 463 | 50 | 551 | 5.61e-19 | 91.7 |
| MS.gene016955.t1 | AT5G28530 | 20.577 | 520 | 316 | 14 | 27 | 463 | 50 | 555 | 4.43e-18 | 89.0 |
| MS.gene016955.t1 | AT5G12200 | 61.972 | 71 | 19 | 1 | 592 | 654 | 229 | 299 | 2.38e-17 | 86.3 |
| MS.gene016955.t1 | AT5G28530 | 23.792 | 269 | 187 | 5 | 197 | 463 | 362 | 614 | 1.99e-16 | 83.6 |
| MS.gene016955.t1 | AT5G28530 | 23.792 | 269 | 187 | 5 | 197 | 463 | 362 | 614 | 1.99e-16 | 83.6 |
| MS.gene016955.t1 | AT5G28530 | 23.420 | 269 | 192 | 5 | 197 | 463 | 362 | 618 | 1.68e-15 | 80.9 |
Find 105 sgRNAs with CRISPR-Local
Find 217 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTTGAACTTCTTTGAATT+TGG | 0.140264 | 5.1:-70575434 | None:intergenic |
| AACAATGAACAGCATTTAAT+TGG | 0.170712 | 5.1:+70574533 | MS.gene016955:CDS |
| TAGAGAGTATGCTTTGAAAA+AGG | 0.184139 | 5.1:+70574130 | MS.gene016955:CDS |
| CGAGGGAGCACAATTCATTT+TGG | 0.189374 | 5.1:-70575467 | None:intergenic |
| CACGCCATAGGTGGTGTTTA+TGG | 0.257699 | 5.1:+70574963 | MS.gene016955:CDS |
| CTTGGACTAACTGGTCTTAA+AGG | 0.272670 | 5.1:+70577100 | MS.gene016955:CDS |
| TAAATTGATGTAATGTTTCA+TGG | 0.277147 | 5.1:-70575873 | None:intergenic |
| CTTCAAAGTTGTGTTTAATC+AGG | 0.287821 | 5.1:+70575570 | MS.gene016955:CDS |
| ACGAATACAGTGAATATAAA+AGG | 0.308487 | 5.1:+70575017 | MS.gene016955:CDS |
| GACCAGCCCTACAAAGAAAA+TGG | 0.313866 | 5.1:+70574373 | MS.gene016955:CDS |
| TGTTCGTTGTTTGAGTTTAG+AGG | 0.315013 | 5.1:+70575616 | MS.gene016955:CDS |
| AATAGATCGGAAAGTCTTAA+TGG | 0.322660 | 5.1:-70574447 | None:intergenic |
| ATGATAGAACTTGGACTAAC+TGG | 0.323580 | 5.1:+70577091 | MS.gene016955:CDS |
| TGAATTCCAGCACCATTGTT+TGG | 0.354475 | 5.1:-70575955 | None:intergenic |
| TTCCAACTTAATACAAATCT+TGG | 0.361351 | 5.1:-70574300 | None:intergenic |
| TGCCAAGATTTGTATTAAGT+TGG | 0.381892 | 5.1:+70574298 | MS.gene016955:CDS |
| TTGAAACTTCATGGATAGTT+CGG | 0.390728 | 5.1:+70573977 | None:intergenic |
| TTATGCTTCAACATAATGAT+TGG | 0.395255 | 5.1:+70575125 | MS.gene016955:CDS |
| TGGAATTCACAGTCCATTGC+GGG | 0.395864 | 5.1:+70575969 | MS.gene016955:CDS |
| TATGATACACACACAACAAC+TGG | 0.402034 | 5.1:+70575067 | MS.gene016955:CDS |
| AGCATGCATGCTTTCTTTGA+TGG | 0.408186 | 5.1:+70575241 | MS.gene016955:CDS |
| CACCACCTATGGCGTGTTGT+AGG | 0.409794 | 5.1:-70574956 | None:intergenic |
| TTAAAGGACATCTTCTTTCA+AGG | 0.412333 | 5.1:+70577116 | MS.gene016955:CDS |
| GCATGTTGGAAGCCTGCAAC+GGG | 0.415038 | 5.1:+70574068 | MS.gene016955:CDS |
| CTTTGCTACTTATCATGTGT+TGG | 0.420954 | 5.1:+70575510 | MS.gene016955:CDS |
| TGCTACTTATCATGTGTTGG+AGG | 0.424099 | 5.1:+70575513 | MS.gene016955:CDS |
| TGTATGAAGAGCGTCATAGA+TGG | 0.424359 | 5.1:+70575158 | MS.gene016955:CDS |
| ATCGTGAAGGTTCTAAAATC+AGG | 0.426549 | 5.1:+70577348 | MS.gene016955:CDS |
| CTTGTTAAAACATACTTCTC+TGG | 0.429704 | 5.1:-70575694 | None:intergenic |
| AATGTGTAGGAGTGCAATAT+TGG | 0.431270 | 5.1:+70576127 | MS.gene016955:intron |
| CAGCATTTAATTGGAAAAGA+AGG | 0.443510 | 5.1:+70574542 | MS.gene016955:CDS |
| CTGTCTGTCATTACTTCGCT+TGG | 0.445713 | 5.1:-70576018 | None:intergenic |
| AACATTCACAGCTGAAATCA+TGG | 0.450961 | 5.1:-70575597 | None:intergenic |
| TTGGAGGAGGTTGTAGTTGG+AGG | 0.455878 | 5.1:+70575529 | MS.gene016955:CDS |
| ACATCAATTTAAGTGTAGTA+AGG | 0.462673 | 5.1:+70575885 | MS.gene016955:CDS |
| CAACAGAAAATGATAGAACT+TGG | 0.466596 | 5.1:+70577082 | MS.gene016955:CDS |
| ATTGAGGTTGTCAGTGGTGG+TGG | 0.468328 | 5.1:+70576196 | MS.gene016955:CDS |
| TGTATTAAGTTGGAAAAGGA+TGG | 0.471002 | 5.1:+70574308 | MS.gene016955:CDS |
| GCATGCATGCTTTCTTTGAT+GGG | 0.490315 | 5.1:+70575242 | MS.gene016955:CDS |
| AGTTGGAAAAGGATGGTTTG+TGG | 0.490374 | 5.1:+70574315 | MS.gene016955:CDS |
| GTGTTGGAGGAGGTTGTAGT+TGG | 0.490830 | 5.1:+70575526 | MS.gene016955:CDS |
| GATTTGTATTAAGTTGGAAA+AGG | 0.491914 | 5.1:+70574304 | MS.gene016955:CDS |
| CAACATAATGATTGGTTGAG+TGG | 0.494843 | 5.1:+70575133 | MS.gene016955:CDS |
| TCAAATCCAAACAATGGTGC+TGG | 0.496584 | 5.1:+70575949 | MS.gene016955:CDS |
| AATTGAAGCCACAGATGGAC+AGG | 0.502360 | 5.1:+70575776 | MS.gene016955:CDS |
| AACTTAATACAAATCTTGGC+AGG | 0.506782 | 5.1:-70574296 | None:intergenic |
| ATCTGTGTGTTCACGAGAGA+GGG | 0.507673 | 5.1:+70575660 | MS.gene016955:CDS |
| TGTAATGAGCATTGATGTAA+TGG | 0.508685 | 5.1:+70577320 | MS.gene016955:CDS |
| ACCACCTATGGCGTGTTGTA+GGG | 0.509756 | 5.1:-70574955 | None:intergenic |
| ATTCTTGTTTGCACAAGAGA+GGG | 0.511572 | 5.1:+70574212 | MS.gene016955:CDS |
| AATGGAGATGATGTTTATGC+AGG | 0.512599 | 5.1:+70577058 | MS.gene016955:CDS |
| AGAATCTGAAGATGCAACTA+AGG | 0.521210 | 5.1:+70575846 | MS.gene016955:CDS |
| CGGGTTAAATGTGAAGATCA+AGG | 0.521428 | 5.1:+70575988 | MS.gene016955:CDS |
| TATGCCATAAACACCACCTA+TGG | 0.521771 | 5.1:-70574967 | None:intergenic |
| TACTTATCATGTGTTGGAGG+AGG | 0.523219 | 5.1:+70575516 | MS.gene016955:CDS |
| ATCGAAATCAATGATGATGC+AGG | 0.524055 | 5.1:+70574416 | MS.gene016955:CDS |
| AACATAATGATTGGTTGAGT+GGG | 0.524704 | 5.1:+70575134 | MS.gene016955:CDS |
| GCAAACAAGAATTGCATAGC+AGG | 0.525492 | 5.1:-70574201 | None:intergenic |
| TGCACAAGAGAGGGGTCTCA+AGG | 0.531486 | 5.1:+70574221 | MS.gene016955:CDS |
| ATCTATGTAGTTGGAAGGAG+AGG | 0.532620 | 5.1:+70577263 | MS.gene016955:intron |
| AAGCATAAACTTGTCGATGA+AGG | 0.533024 | 5.1:-70575110 | None:intergenic |
| TCTTCACATTTAACCCGCAA+TGG | 0.533346 | 5.1:-70575982 | None:intergenic |
| TAGTATTCATGATGAAGGTA+TGG | 0.538379 | 5.1:+70574019 | MS.gene016955:CDS |
| CCCTCGTTGAATGTTGTCGA+GGG | 0.543640 | 5.1:+70575484 | MS.gene016955:CDS |
| TGTGATAGTATTCATGATGA+AGG | 0.546656 | 5.1:+70574014 | MS.gene016955:CDS |
| CAATTTAAGTGTAGTAAGGA+TGG | 0.555667 | 5.1:+70575889 | MS.gene016955:CDS |
| TTTATATCTATGTAGTTGGA+AGG | 0.557118 | 5.1:+70577258 | MS.gene016955:intron |
| AGGATCAAGTCTGCGATGGA+AGG | 0.560217 | 5.1:+70575037 | MS.gene016955:CDS |
| CCGCATTGTTGACAATAGAT+CGG | 0.561490 | 5.1:-70574460 | None:intergenic |
| TATCTGTGTGTTCACGAGAG+AGG | 0.565938 | 5.1:+70575659 | MS.gene016955:CDS |
| TAAAAGGATCAAGTCTGCGA+TGG | 0.569182 | 5.1:+70575033 | MS.gene016955:CDS |
| TTGTCAAACCTGTCCATCTG+TGG | 0.569297 | 5.1:-70575784 | None:intergenic |
| TCCCTCGTTGAATGTTGTCG+AGG | 0.574922 | 5.1:+70575483 | MS.gene016955:CDS |
| GTATGAAGAGCGTCATAGAT+GGG | 0.575034 | 5.1:+70575159 | MS.gene016955:CDS |
| CTGGAATTCACAGTCCATTG+CGG | 0.575404 | 5.1:+70575968 | MS.gene016955:CDS |
| TGGCATGAGTGTACTCACCT+TGG | 0.576261 | 5.1:-70575414 | None:intergenic |
| AATTCTTGTTTGCACAAGAG+AGG | 0.579543 | 5.1:+70574211 | MS.gene016955:CDS |
| CTATGTAGAATCATCTATTG+AGG | 0.583723 | 5.1:+70576180 | MS.gene016955:CDS |
| TCTATTGTCAACAATGCGGA+AGG | 0.586150 | 5.1:+70574464 | MS.gene016955:CDS |
| AGCATGTTGGAAGCCTGCAA+CGG | 0.586912 | 5.1:+70574067 | MS.gene016955:CDS |
| TCCATTGAAAAGCAATTCCA+AGG | 0.588119 | 5.1:+70575397 | MS.gene016955:CDS |
| AGTTGCATCTTCAGATTCTG+CGG | 0.590083 | 5.1:-70575842 | None:intergenic |
| TATTGTGACAGACCAATGTA+AGG | 0.594260 | 5.1:+70574904 | MS.gene016955:intron |
| TCTATTGAGGTTGTCAGTGG+TGG | 0.597149 | 5.1:+70576193 | MS.gene016955:CDS |
| ATGGAGATGATGTTTATGCA+GGG | 0.598515 | 5.1:+70577059 | MS.gene016955:CDS |
| CTGATGATGATGAAGCATGT+TGG | 0.601790 | 5.1:+70574054 | MS.gene016955:CDS |
| TCTTCTTTCAAGGCGTGCAG+TGG | 0.604982 | 5.1:+70577126 | MS.gene016955:CDS |
| TGTAGGGAAGACTAACTCAA+TGG | 0.612233 | 5.1:-70574939 | None:intergenic |
| TCTTCCCTACAACACGCCAT+AGG | 0.617216 | 5.1:+70574951 | MS.gene016955:CDS |
| GATGACTCAAATCCAAACAA+TGG | 0.622244 | 5.1:+70575943 | MS.gene016955:CDS |
| TTCTTGTTTGCACAAGAGAG+GGG | 0.624091 | 5.1:+70574213 | MS.gene016955:CDS |
| GCACAAGAGAGGGGTCTCAA+GGG | 0.625092 | 5.1:+70574222 | MS.gene016955:CDS |
| TCCCTACAACACGCCATAGG+TGG | 0.629132 | 5.1:+70574954 | MS.gene016955:CDS |
| GAGAGAATTGAAGCCACAGA+TGG | 0.631735 | 5.1:+70575771 | MS.gene016955:CDS |
| TCAATGATGATGCAGGAGTG+AGG | 0.638777 | 5.1:+70574423 | MS.gene016955:CDS |
| TCATCTATTGAGGTTGTCAG+TGG | 0.640747 | 5.1:+70576190 | MS.gene016955:CDS |
| CCCTCGACAACATTCAACGA+GGG | 0.645738 | 5.1:-70575484 | None:intergenic |
| CAGATAACACATGACAACAC+AGG | 0.666939 | 5.1:-70575642 | None:intergenic |
| CTATTGTCAACAATGCGGAA+GGG | 0.669349 | 5.1:+70574465 | MS.gene016955:CDS |
| TCGCGCTATTCACTTATACG+TGG | 0.671636 | 5.1:+70577293 | MS.gene016955:CDS |
| GTAGGAGTGCAATATTGGAA+TGG | 0.673951 | 5.1:+70576132 | MS.gene016955:intron |
| TGTAATGGAAGAAATCGTGA+AGG | 0.687566 | 5.1:+70577335 | MS.gene016955:CDS |
| CCGATCTATTGTCAACAATG+CGG | 0.696000 | 5.1:+70574460 | MS.gene016955:CDS |
| CATGTTGGAAGCCTGCAACG+GGG | 0.757747 | 5.1:+70574069 | MS.gene016955:CDS |
| ACCCTCGACAACATTCAACG+AGG | 0.768012 | 5.1:-70575485 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATTTATGTACTTTATT+AGG | + | chr5.1:70576381-70576400 | MS.gene016955:intron | 10.0% |
| !!! | TAGTTAACATAATTTTATAA+TGG | - | chr5.1:70576252-70576271 | None:intergenic | 10.0% |
| !! | ATTCAATATACATACATATA+TGG | - | chr5.1:70576087-70576106 | None:intergenic | 15.0% |
| !! | TAACATTTCTAATGAAAATA+AGG | + | chr5.1:70576507-70576526 | MS.gene016955:intron | 15.0% |
| !! | TTAACTAATGTTTAAATTCA+TGG | + | chr5.1:70576265-70576284 | MS.gene016955:intron | 15.0% |
| !!! | ATTTGTTTACTTTTGAAATA+GGG | + | chr5.1:70576867-70576886 | MS.gene016955:intron | 15.0% |
| !!! | CTTTGTAAGAAAATATTTTT+GGG | + | chr5.1:70575189-70575208 | MS.gene016955:CDS | 15.0% |
| !!! | TATTTGTTTACTTTTGAAAT+AGG | + | chr5.1:70576866-70576885 | MS.gene016955:intron | 15.0% |
| !! | CATATTTATATCTATGTAGT+TGG | + | chr5.1:70577254-70577273 | MS.gene016955:intron | 20.0% |
| !! | GATGGAAGAAAAATATTAAA+AGG | + | chr5.1:70575716-70575735 | MS.gene016955:CDS | 20.0% |
| !! | TAAATTGATGTAATGTTTCA+TGG | - | chr5.1:70575876-70575895 | None:intergenic | 20.0% |
| !!! | AAATATTTTCTTACAAAGGT+TGG | - | chr5.1:70575187-70575206 | None:intergenic | 20.0% |
| !!! | CCAAAAATATTTTCTTACAA+AGG | - | chr5.1:70575191-70575210 | None:intergenic | 20.0% |
| !!! | CCTTTGTAAGAAAATATTTT+TGG | + | chr5.1:70575188-70575207 | MS.gene016955:CDS | 20.0% |
| ! | AACAATGAACAGCATTTAAT+TGG | + | chr5.1:70574533-70574552 | MS.gene016955:CDS | 25.0% |
| ! | AATACAAAAACCACAAACAA+AGG | - | chr5.1:70576850-70576869 | None:intergenic | 25.0% |
| ! | ACATCAATTTAAGTGTAGTA+AGG | + | chr5.1:70575885-70575904 | MS.gene016955:CDS | 25.0% |
| ! | ACGAATACAGTGAATATAAA+AGG | + | chr5.1:70575017-70575036 | MS.gene016955:CDS | 25.0% |
| ! | ACTCATAGTTTATTGATAAG+TGG | + | chr5.1:70576682-70576701 | MS.gene016955:intron | 25.0% |
| ! | ATTGAGAATAGTTTATGTAC+TGG | + | chr5.1:70576463-70576482 | MS.gene016955:intron | 25.0% |
| ! | CAACTTGTGTTTAAATACTA+CGG | - | chr5.1:70576733-70576752 | None:intergenic | 25.0% |
| ! | CTCATAGTTTATTGATAAGT+GGG | + | chr5.1:70576683-70576702 | MS.gene016955:intron | 25.0% |
| ! | GATAACTTATGTAGTAGTTT+AGG | + | chr5.1:70576425-70576444 | MS.gene016955:intron | 25.0% |
| ! | TTATGCTTCAACATAATGAT+TGG | + | chr5.1:70575125-70575144 | MS.gene016955:CDS | 25.0% |
| ! | TTCCAACTTAATACAAATCT+TGG | - | chr5.1:70574303-70574322 | None:intergenic | 25.0% |
| ! | TTCCATATCAGTTACTAAAT+GGG | + | chr5.1:70576556-70576575 | MS.gene016955:intron | 25.0% |
| ! | TTTATATCTATGTAGTTGGA+AGG | + | chr5.1:70577258-70577277 | MS.gene016955:intron | 25.0% |
| !!! | AGAAGTATGTTTTAACAAGA+TGG | + | chr5.1:70575698-70575717 | MS.gene016955:CDS | 25.0% |
| !!! | CTACTCTTTTAAGTTTTTCA+TGG | + | chr5.1:70576980-70576999 | MS.gene016955:intron | 25.0% |
| !!! | GAGCTATTTTTCTAAAATGA+GGG | + | chr5.1:70574583-70574602 | MS.gene016955:intron | 25.0% |
| !!! | GATTTGTATTAAGTTGGAAA+AGG | + | chr5.1:70574304-70574323 | MS.gene016955:CDS | 25.0% |
| !!! | TGAGCTATTTTTCTAAAATG+AGG | + | chr5.1:70574582-70574601 | MS.gene016955:intron | 25.0% |
| !!! | TGATTTTGATGAACAACATT+TGG | + | chr5.1:70577166-70577185 | MS.gene016955:intron | 25.0% |
| !!! | TTTAAGTTTTTCATGGTACA+AGG | + | chr5.1:70576987-70577006 | MS.gene016955:intron | 25.0% |
| !!! | TTTTATTTGTCCAAATGTGT+AGG | + | chr5.1:70576114-70576133 | MS.gene016955:intron | 25.0% |
| AACTTAATACAAATCTTGGC+AGG | - | chr5.1:70574299-70574318 | None:intergenic | 30.0% | |
| AATAGATCGGAAAGTCTTAA+TGG | - | chr5.1:70574450-70574469 | None:intergenic | 30.0% | |
| AATCAACATTACTTGGATGT+GGG | + | chr5.1:70574798-70574817 | MS.gene016955:intron | 30.0% | |
| ACATCGAAAAAAAGAGATGA+TGG | + | chr5.1:70574173-70574192 | MS.gene016955:CDS | 30.0% | |
| AGCAGAAAAAGAATTTGAAG+CGG | + | chr5.1:70575330-70575349 | MS.gene016955:CDS | 30.0% | |
| AGCTTGAACTTCTTTGAATT+TGG | - | chr5.1:70575437-70575456 | None:intergenic | 30.0% | |
| ATTCCTCAAAACTCACTTAA+AGG | - | chr5.1:70576919-70576938 | None:intergenic | 30.0% | |
| ATTTAAGAATGCATGTCTCT+TGG | + | chr5.1:70577010-70577029 | MS.gene016955:intron | 30.0% | |
| CAACAGAAAATGATAGAACT+TGG | + | chr5.1:70577082-70577101 | MS.gene016955:CDS | 30.0% | |
| CAATTTAAGTGTAGTAAGGA+TGG | + | chr5.1:70575889-70575908 | MS.gene016955:CDS | 30.0% | |
| CAGCATTTAATTGGAAAAGA+AGG | + | chr5.1:70574542-70574561 | MS.gene016955:CDS | 30.0% | |
| CTATGCAAACTCTAATAGAA+AGG | + | chr5.1:70576755-70576774 | MS.gene016955:intron | 30.0% | |
| CTATGTAGAATCATCTATTG+AGG | + | chr5.1:70576180-70576199 | MS.gene016955:CDS | 30.0% | |
| CTTCAAAGTTGTGTTTAATC+AGG | + | chr5.1:70575570-70575589 | MS.gene016955:CDS | 30.0% | |
| CTTCCATATCAGTTACTAAA+TGG | + | chr5.1:70576555-70576574 | MS.gene016955:intron | 30.0% | |
| CTTGTTAAAACATACTTCTC+TGG | - | chr5.1:70575697-70575716 | None:intergenic | 30.0% | |
| GATAACATATGTACTAGTTG+AGG | + | chr5.1:70576403-70576422 | MS.gene016955:intron | 30.0% | |
| GGAGAATACATAATTTCTGA+AGG | - | chr5.1:70576066-70576085 | None:intergenic | 30.0% | |
| TAGTATTCATGATGAAGGTA+TGG | + | chr5.1:70574019-70574038 | MS.gene016955:CDS | 30.0% | |
| TGCCAAGATTTGTATTAAGT+TGG | + | chr5.1:70574298-70574317 | MS.gene016955:CDS | 30.0% | |
| TGTAATCATATAGCACCAAA+AGG | - | chr5.1:70576641-70576660 | None:intergenic | 30.0% | |
| TGTGATAGTATTCATGATGA+AGG | + | chr5.1:70574014-70574033 | MS.gene016955:CDS | 30.0% | |
| TTAAAGGACATCTTCTTTCA+AGG | + | chr5.1:70577116-70577135 | MS.gene016955:CDS | 30.0% | |
| TTAATTGGAAAAGAAGGTGA+TGG | + | chr5.1:70574548-70574567 | MS.gene016955:intron | 30.0% | |
| TTCAAAGGAAATGAAAATCG+TGG | + | chr5.1:70576589-70576608 | MS.gene016955:intron | 30.0% | |
| TTTCTTCTACGACATAGATT+TGG | + | chr5.1:70574619-70574638 | MS.gene016955:intron | 30.0% | |
| ! | AAAAAGTCTTGCATGGATTA+TGG | + | chr5.1:70576532-70576551 | MS.gene016955:intron | 30.0% |
| ! | AAAAGGCATGTCATACTTAT+TGG | - | chr5.1:70574747-70574766 | None:intergenic | 30.0% |
| ! | AACATAATGATTGGTTGAGT+GGG | + | chr5.1:70575134-70575153 | MS.gene016955:CDS | 30.0% |
| ! | AATCCTTTAAGTGAGTTTTG+AGG | + | chr5.1:70576913-70576932 | MS.gene016955:intron | 30.0% |
| ! | AGAGCTACTTATGAGTATTT+TGG | + | chr5.1:70574689-70574708 | MS.gene016955:intron | 30.0% |
| ! | TCATGTAAGGAATGTGTTTT+GGG | + | chr5.1:70574652-70574671 | MS.gene016955:intron | 30.0% |
| ! | TTCATGTAAGGAATGTGTTT+TGG | + | chr5.1:70574651-70574670 | MS.gene016955:intron | 30.0% |
| !! | AATAGTTTATGTACTGGTTG+AGG | + | chr5.1:70576469-70576488 | MS.gene016955:intron | 30.0% |
| !! | AGAGAGTATGCTTTGAAAAA+GGG | + | chr5.1:70574131-70574150 | MS.gene016955:CDS | 30.0% |
| !! | ATCATGTCTTTTTCGCAAAA+TGG | - | chr5.1:70574503-70574522 | None:intergenic | 30.0% |
| !! | TAGAGAGTATGCTTTGAAAA+AGG | + | chr5.1:70574130-70574149 | MS.gene016955:CDS | 30.0% |
| !! | TGTAATGAGCATTGATGTAA+TGG | + | chr5.1:70577320-70577339 | MS.gene016955:CDS | 30.0% |
| !! | TGTATTAAGTTGGAAAAGGA+TGG | + | chr5.1:70574308-70574327 | MS.gene016955:CDS | 30.0% |
| !! | TTTGGTGCTATATGATTACA+TGG | + | chr5.1:70576641-70576660 | MS.gene016955:intron | 30.0% |
| !!! | ACAATTTTTTGTCTTAGGTG+GGG | - | chr5.1:70574276-70574295 | None:intergenic | 30.0% |
| !!! | AGTTTTGAGGAATTGATTTC+TGG | + | chr5.1:70576926-70576945 | MS.gene016955:intron | 30.0% |
| !!! | ATCTCTTTTTTTCGATGTTC+TGG | - | chr5.1:70574171-70574190 | None:intergenic | 30.0% |
| !!! | ATGCTTTGAAAAAGGGTTTT+CGG | + | chr5.1:70574138-70574157 | MS.gene016955:CDS | 30.0% |
| !!! | CAACTGGTTTTGAAGATAAA+TGG | + | chr5.1:70575083-70575102 | MS.gene016955:CDS | 30.0% |
| !!! | GACAATTTTTTGTCTTAGGT+GGG | - | chr5.1:70574277-70574296 | None:intergenic | 30.0% |
| !!! | GTAAGAAAATATTTTTGGGC+AGG | + | chr5.1:70575193-70575212 | MS.gene016955:CDS | 30.0% |
| AACATTCACAGCTGAAATCA+TGG | - | chr5.1:70575600-70575619 | None:intergenic | 35.0% | |
| AAGCATAAACTTGTCGATGA+AGG | - | chr5.1:70575113-70575132 | None:intergenic | 35.0% | |
| AATGGAGATGATGTTTATGC+AGG | + | chr5.1:70577058-70577077 | MS.gene016955:CDS | 35.0% | |
| ACACCTACAAATGTAGCAAA+AGG | - | chr5.1:70574764-70574783 | None:intergenic | 35.0% | |
| AGAATCTGAAGATGCAACTA+AGG | + | chr5.1:70575846-70575865 | MS.gene016955:CDS | 35.0% | |
| ATATTGCACTCCTACACATT+TGG | - | chr5.1:70576127-70576146 | None:intergenic | 35.0% | |
| ATGATAGAACTTGGACTAAC+TGG | + | chr5.1:70577091-70577110 | MS.gene016955:CDS | 35.0% | |
| ATGGAGATGATGTTTATGCA+GGG | + | chr5.1:70577059-70577078 | MS.gene016955:CDS | 35.0% | |
| CAAGTGGTAATCTTGTAAAC+TGG | + | chr5.1:70576706-70576725 | MS.gene016955:intron | 35.0% | |
| CAATATTCGATCACAGAGTT+TGG | - | chr5.1:70576822-70576841 | None:intergenic | 35.0% | |
| CAATCAACATTACTTGGATG+TGG | + | chr5.1:70574797-70574816 | MS.gene016955:intron | 35.0% | |
| CACCAAAAGGAAATAAACAC+CGG | - | chr5.1:70576628-70576647 | None:intergenic | 35.0% | |
| CATGGTCAATCAACATTACT+TGG | + | chr5.1:70574791-70574810 | MS.gene016955:intron | 35.0% | |
| GATGACTCAAATCCAAACAA+TGG | + | chr5.1:70575943-70575962 | MS.gene016955:CDS | 35.0% | |
| GATTACATGGTAACAAGTGT+TGG | + | chr5.1:70576654-70576673 | MS.gene016955:intron | 35.0% | |
| GGAAACATATGTACTAGTTC+AGG | + | chr5.1:70576337-70576356 | MS.gene016955:intron | 35.0% | |
| GTCCCATTTAGTAACTGATA+TGG | - | chr5.1:70576561-70576580 | None:intergenic | 35.0% | |
| TAAGGCAAAAAAGTCTTGCA+TGG | + | chr5.1:70576525-70576544 | MS.gene016955:intron | 35.0% | |
| TATGATACACACACAACAAC+TGG | + | chr5.1:70575067-70575086 | MS.gene016955:CDS | 35.0% | |
| TATTGTGACAGACCAATGTA+AGG | + | chr5.1:70574904-70574923 | MS.gene016955:intron | 35.0% | |
| TCCATTGAAAAGCAATTCCA+AGG | + | chr5.1:70575397-70575416 | MS.gene016955:CDS | 35.0% | |
| TTTATTGATAAGTGGGCAAG+TGG | + | chr5.1:70576690-70576709 | MS.gene016955:intron | 35.0% | |
| ! | AATGTGTAGGAGTGCAATAT+TGG | + | chr5.1:70576127-70576146 | MS.gene016955:intron | 35.0% |
| ! | AATTCTTGTTTGCACAAGAG+AGG | + | chr5.1:70574211-70574230 | MS.gene016955:CDS | 35.0% |
| ! | ATCGAAATCAATGATGATGC+AGG | + | chr5.1:70574416-70574435 | MS.gene016955:CDS | 35.0% |
| ! | ATGCCTTTTGCTACATTTGT+AGG | + | chr5.1:70574758-70574777 | MS.gene016955:intron | 35.0% |
| ! | ATTCTTGTTTGCACAAGAGA+GGG | + | chr5.1:70574212-70574231 | MS.gene016955:CDS | 35.0% |
| ! | CAACATAATGATTGGTTGAG+TGG | + | chr5.1:70575133-70575152 | MS.gene016955:CDS | 35.0% |
| ! | CATTTTGTACAGCCTTACAT+TGG | - | chr5.1:70574919-70574938 | None:intergenic | 35.0% |
| ! | CTTTGCTACTTATCATGTGT+TGG | + | chr5.1:70575510-70575529 | MS.gene016955:CDS | 35.0% |
| ! | GCAAGTCCATTTTCTTTGTA+GGG | - | chr5.1:70574382-70574401 | None:intergenic | 35.0% |
| ! | GTAATGTTGATTGACCATGA+TGG | - | chr5.1:70574790-70574809 | None:intergenic | 35.0% |
| ! | TATTGTGTCTCCTTTGTTTG+TGG | + | chr5.1:70576837-70576856 | MS.gene016955:intron | 35.0% |
| ! | TGCAAGTCCATTTTCTTTGT+AGG | - | chr5.1:70574383-70574402 | None:intergenic | 35.0% |
| ! | TGGATGACGATTTTCATGTA+AGG | + | chr5.1:70574639-70574658 | MS.gene016955:intron | 35.0% |
| ! | TGTAATGGAAGAAATCGTGA+AGG | + | chr5.1:70577335-70577354 | MS.gene016955:CDS | 35.0% |
| ! | TGTTCGTTGTTTGAGTTTAG+AGG | + | chr5.1:70575616-70575635 | MS.gene016955:CDS | 35.0% |
| ! | TTGTGTGGCTTTTCAAATCA+TGG | + | chr5.1:70574849-70574868 | MS.gene016955:intron | 35.0% |
| !! | ACCTTGGAATTGCTTTTCAA+TGG | - | chr5.1:70575401-70575420 | None:intergenic | 35.0% |
| !! | ATCGTGAAGGTTCTAAAATC+AGG | + | chr5.1:70577348-70577367 | MS.gene016955:CDS | 35.0% |
| !!! | CAATTTTTTGTCTTAGGTGG+GGG | - | chr5.1:70574275-70574294 | None:intergenic | 35.0% |
| !!! | GCAGGACAATTTTTTGTCTT+AGG | - | chr5.1:70574281-70574300 | None:intergenic | 35.0% |
| !!! | GGACAATTTTTTGTCTTAGG+TGG | - | chr5.1:70574278-70574297 | None:intergenic | 35.0% |
| !!! | TGAAGCGGATTTTAATTCAC+TGG | + | chr5.1:70575345-70575364 | MS.gene016955:CDS | 35.0% |
| AAGACACAGAGTCATTTGTG+TGG | + | chr5.1:70574834-70574853 | MS.gene016955:intron | 40.0% | |
| AGCATGCATGCTTTCTTTGA+TGG | + | chr5.1:70575241-70575260 | MS.gene016955:CDS | 40.0% | |
| AGTTGCATCTTCAGATTCTG+CGG | - | chr5.1:70575845-70575864 | None:intergenic | 40.0% | |
| AGTTGGAAAAGGATGGTTTG+TGG | + | chr5.1:70574315-70574334 | MS.gene016955:CDS | 40.0% | |
| ATCTATGTAGTTGGAAGGAG+AGG | + | chr5.1:70577263-70577282 | MS.gene016955:intron | 40.0% | |
| CAGATAACACATGACAACAC+AGG | - | chr5.1:70575645-70575664 | None:intergenic | 40.0% | |
| CCGATCTATTGTCAACAATG+CGG | + | chr5.1:70574460-70574479 | MS.gene016955:CDS | 40.0% | |
| CCGCATTGTTGACAATAGAT+CGG | - | chr5.1:70574463-70574482 | None:intergenic | 40.0% | |
| CGGGTTAAATGTGAAGATCA+AGG | + | chr5.1:70575988-70576007 | MS.gene016955:CDS | 40.0% | |
| CTATTGTCAACAATGCGGAA+GGG | + | chr5.1:70574465-70574484 | MS.gene016955:CDS | 40.0% | |
| GCAAACAAGAATTGCATAGC+AGG | - | chr5.1:70574204-70574223 | None:intergenic | 40.0% | |
| GCATGCATGCTTTCTTTGAT+GGG | + | chr5.1:70575242-70575261 | MS.gene016955:CDS | 40.0% | |
| GCTTCATTGTATGCTTGGAA+AGG | + | chr5.1:70574871-70574890 | MS.gene016955:intron | 40.0% | |
| GGAAATGAAAATCGTGGTCA+CGG | + | chr5.1:70576595-70576614 | MS.gene016955:intron | 40.0% | |
| TAAAAGGATCAAGTCTGCGA+TGG | + | chr5.1:70575033-70575052 | MS.gene016955:CDS | 40.0% | |
| TACTTATCATGTGTTGGAGG+AGG | + | chr5.1:70575516-70575535 | MS.gene016955:CDS | 40.0% | |
| TATGCCATAAACACCACCTA+TGG | - | chr5.1:70574970-70574989 | None:intergenic | 40.0% | |
| TCAAATCCAAACAATGGTGC+TGG | + | chr5.1:70575949-70575968 | MS.gene016955:CDS | 40.0% | |
| TCATCTATTGAGGTTGTCAG+TGG | + | chr5.1:70576190-70576209 | MS.gene016955:CDS | 40.0% | |
| TCATGGCTTCATTGTATGCT+TGG | + | chr5.1:70574866-70574885 | MS.gene016955:intron | 40.0% | |
| TCTATTGTCAACAATGCGGA+AGG | + | chr5.1:70574464-70574483 | MS.gene016955:CDS | 40.0% | |
| TCTTCACATTTAACCCGCAA+TGG | - | chr5.1:70575985-70576004 | None:intergenic | 40.0% | |
| TGAATTCCAGCACCATTGTT+TGG | - | chr5.1:70575958-70575977 | None:intergenic | 40.0% | |
| TGTAGGGAAGACTAACTCAA+TGG | - | chr5.1:70574942-70574961 | None:intergenic | 40.0% | |
| TGTGTTGTGTTACAGATCTG+AGG | + | chr5.1:70576316-70576335 | MS.gene016955:intron | 40.0% | |
| TTTGTAGGTGTGAACCATCA+TGG | + | chr5.1:70574773-70574792 | MS.gene016955:intron | 40.0% | |
| ! | ATGGGACGAAGTTGTTTCAA+AGG | + | chr5.1:70576574-70576593 | MS.gene016955:intron | 40.0% |
| ! | CTGATGATGATGAAGCATGT+TGG | + | chr5.1:70574054-70574073 | MS.gene016955:CDS | 40.0% |
| ! | CTGTATTCGTTGAGCTTTTC+AGG | - | chr5.1:70575007-70575026 | None:intergenic | 40.0% |
| ! | GTAGGAGTGCAATATTGGAA+TGG | + | chr5.1:70576132-70576151 | MS.gene016955:intron | 40.0% |
| ! | TGCTACTTATCATGTGTTGG+AGG | + | chr5.1:70575513-70575532 | MS.gene016955:CDS | 40.0% |
| ! | TTCTTGTTTGCACAAGAGAG+GGG | + | chr5.1:70574213-70574232 | MS.gene016955:CDS | 40.0% |
| !! | CTTGGACTAACTGGTCTTAA+AGG | + | chr5.1:70577100-70577119 | MS.gene016955:CDS | 40.0% |
| !! | CTTTGAAAAAGGGTTTTCGG+TGG | + | chr5.1:70574141-70574160 | MS.gene016955:CDS | 40.0% |
| !! | GTATGAAGAGCGTCATAGAT+GGG | + | chr5.1:70575159-70575178 | MS.gene016955:CDS | 40.0% |
| !! | TGTATGAAGAGCGTCATAGA+TGG | + | chr5.1:70575158-70575177 | MS.gene016955:CDS | 40.0% |
| AAAATCGTGGTCACGGAGAA+AGG | + | chr5.1:70576602-70576621 | MS.gene016955:intron | 45.0% | |
| AATTGAAGCCACAGATGGAC+AGG | + | chr5.1:70575776-70575795 | MS.gene016955:CDS | 45.0% | |
| ATCTGTGTGTTCACGAGAGA+GGG | + | chr5.1:70575660-70575679 | MS.gene016955:CDS | 45.0% | |
| CAAGCGAAGTAATGACAGAC+AGG | + | chr5.1:70576019-70576038 | MS.gene016955:intron | 45.0% | |
| CATCATCTCCATTTCCTGCA+TGG | - | chr5.1:70577051-70577070 | None:intergenic | 45.0% | |
| CTGGAATTCACAGTCCATTG+CGG | + | chr5.1:70575968-70575987 | MS.gene016955:CDS | 45.0% | |
| CTGTCTGTCATTACTTCGCT+TGG | - | chr5.1:70576021-70576040 | None:intergenic | 45.0% | |
| GACCAGCCCTACAAAGAAAA+TGG | + | chr5.1:70574373-70574392 | MS.gene016955:CDS | 45.0% | |
| GAGAGAATTGAAGCCACAGA+TGG | + | chr5.1:70575771-70575790 | MS.gene016955:CDS | 45.0% | |
| TATCTGTGTGTTCACGAGAG+AGG | + | chr5.1:70575659-70575678 | MS.gene016955:CDS | 45.0% | |
| TCGCGCTATTCACTTATACG+TGG | + | chr5.1:70577293-70577312 | MS.gene016955:CDS | 45.0% | |
| TCTATTGAGGTTGTCAGTGG+TGG | + | chr5.1:70576193-70576212 | MS.gene016955:CDS | 45.0% | |
| TGGAATTCACAGTCCATTGC+GGG | + | chr5.1:70575969-70575988 | MS.gene016955:CDS | 45.0% | |
| TTGTCAAACCTGTCCATCTG+TGG | - | chr5.1:70575787-70575806 | None:intergenic | 45.0% | |
| ! | GGCCGGTGTTTATTTCCTTT+TGG | + | chr5.1:70576623-70576642 | MS.gene016955:intron | 45.0% |
| ! | GTCCATTTTCTTTGTAGGGC+TGG | - | chr5.1:70574378-70574397 | None:intergenic | 45.0% |
| ! | TCAATGATGATGCAGGAGTG+AGG | + | chr5.1:70574423-70574442 | MS.gene016955:CDS | 45.0% |
| ! | TGGAAAAGAAGGTGATGGCA+AGG | + | chr5.1:70574553-70574572 | MS.gene016955:intron | 45.0% |
| !! | CGAGGGAGCACAATTCATTT+TGG | - | chr5.1:70575470-70575489 | None:intergenic | 45.0% |
| ACCACCTATGGCGTGTTGTA+GGG | - | chr5.1:70574958-70574977 | None:intergenic | 50.0% | |
| ACCCTCGACAACATTCAACG+AGG | - | chr5.1:70575488-70575507 | None:intergenic | 50.0% | |
| AGCATGTTGGAAGCCTGCAA+CGG | + | chr5.1:70574067-70574086 | MS.gene016955:CDS | 50.0% | |
| AGGATCAAGTCTGCGATGGA+AGG | + | chr5.1:70575037-70575056 | MS.gene016955:CDS | 50.0% | |
| ATTGAGGTTGTCAGTGGTGG+TGG | + | chr5.1:70576196-70576215 | MS.gene016955:CDS | 50.0% | |
| CACGCCATAGGTGGTGTTTA+TGG | + | chr5.1:70574963-70574982 | MS.gene016955:CDS | 50.0% | |
| CCCTCGACAACATTCAACGA+GGG | - | chr5.1:70575487-70575506 | None:intergenic | 50.0% | |
| CCCTCGTTGAATGTTGTCGA+GGG | + | chr5.1:70575484-70575503 | MS.gene016955:CDS | 50.0% | |
| CTACGTCTTCGACTGCAAAG+TGG | - | chr5.1:70576789-70576808 | None:intergenic | 50.0% | |
| GGTCTGTCACAATACCCACA+GGG | - | chr5.1:70574898-70574917 | None:intergenic | 50.0% | |
| GTCTGTCACAATACCCACAG+GGG | - | chr5.1:70574897-70574916 | None:intergenic | 50.0% | |
| GTGTTGGAGGAGGTTGTAGT+TGG | + | chr5.1:70575526-70575545 | MS.gene016955:CDS | 50.0% | |
| TCCATTTCCTGCATGGACCA+TGG | - | chr5.1:70577044-70577063 | None:intergenic | 50.0% | |
| TCCCTCGTTGAATGTTGTCG+AGG | + | chr5.1:70575483-70575502 | MS.gene016955:CDS | 50.0% | |
| TCTTCCCTACAACACGCCAT+AGG | + | chr5.1:70574951-70574970 | MS.gene016955:CDS | 50.0% | |
| TCTTCTTTCAAGGCGTGCAG+TGG | + | chr5.1:70577126-70577145 | MS.gene016955:CDS | 50.0% | |
| TGGCATGAGTGTACTCACCT+TGG | - | chr5.1:70575417-70575436 | None:intergenic | 50.0% | |
| TGGTCTGTCACAATACCCAC+AGG | - | chr5.1:70574899-70574918 | None:intergenic | 50.0% | |
| TTGGAGGAGGTTGTAGTTGG+AGG | + | chr5.1:70575529-70575548 | MS.gene016955:CDS | 50.0% | |
| !! | GGGGGTGTCTTTAACGTACA+CGG | - | chr5.1:70574257-70574276 | None:intergenic | 50.0% |
| !! | TGTCAGTGGTGGTGGTTTGT+TGG | + | chr5.1:70576204-70576223 | MS.gene016955:intron | 50.0% |
| ATGCTTGGAAAGGCCCCTGT+GGG | + | chr5.1:70574881-70574900 | MS.gene016955:intron | 55.0% | |
| CACCACCTATGGCGTGTTGT+AGG | - | chr5.1:70574959-70574978 | None:intergenic | 55.0% | |
| CATGTTGGAAGCCTGCAACG+GGG | + | chr5.1:70574069-70574088 | MS.gene016955:CDS | 55.0% | |
| GAAAAACGCATCCCCGTTGC+AGG | - | chr5.1:70574083-70574102 | None:intergenic | 55.0% | |
| GCACAAGAGAGGGGTCTCAA+GGG | + | chr5.1:70574222-70574241 | MS.gene016955:CDS | 55.0% | |
| GCATGTTGGAAGCCTGCAAC+GGG | + | chr5.1:70574068-70574087 | MS.gene016955:CDS | 55.0% | |
| GCCATGGTCCATGCAGGAAA+TGG | + | chr5.1:70577040-70577059 | MS.gene016955:intron | 55.0% | |
| TATGCTTGGAAAGGCCCCTG+TGG | + | chr5.1:70574880-70574899 | MS.gene016955:intron | 55.0% | |
| TCCCTACAACACGCCATAGG+TGG | + | chr5.1:70574954-70574973 | MS.gene016955:CDS | 55.0% | |
| TCCTGCATGGACCATGGCTA+AGG | - | chr5.1:70577038-70577057 | None:intergenic | 55.0% | |
| TGCACAAGAGAGGGGTCTCA+AGG | + | chr5.1:70574221-70574240 | MS.gene016955:CDS | 55.0% | |
| !! | GTCTCTTGGTGCCTTAGCCA+TGG | + | chr5.1:70577024-70577043 | MS.gene016955:intron | 55.0% |
| GCCTTAGCCATGGTCCATGC+AGG | + | chr5.1:70577034-70577053 | MS.gene016955:intron | 60.0% | |
| TCGTGGTCACGGAGAAAGGC+CGG | + | chr5.1:70576606-70576625 | MS.gene016955:intron | 60.0% | |
| ! | CTTGGATGTGGGCTGCTCTC+AGG | + | chr5.1:70574809-70574828 | MS.gene016955:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 70573987 | 70577383 | 70573987 | ID=MS.gene016955 |
| chr5.1 | mRNA | 70573987 | 70577383 | 70573987 | ID=MS.gene016955.t1;Parent=MS.gene016955 |
| chr5.1 | exon | 70573987 | 70574563 | 70573987 | ID=MS.gene016955.t1.exon1;Parent=MS.gene016955.t1 |
| chr5.1 | CDS | 70573987 | 70574563 | 70573987 | ID=cds.MS.gene016955.t1;Parent=MS.gene016955.t1 |
| chr5.1 | exon | 70574915 | 70576026 | 70574915 | ID=MS.gene016955.t1.exon2;Parent=MS.gene016955.t1 |
| chr5.1 | CDS | 70574915 | 70576026 | 70574915 | ID=cds.MS.gene016955.t1;Parent=MS.gene016955.t1 |
| chr5.1 | exon | 70576136 | 70576217 | 70576136 | ID=MS.gene016955.t1.exon3;Parent=MS.gene016955.t1 |
| chr5.1 | CDS | 70576136 | 70576217 | 70576136 | ID=cds.MS.gene016955.t1;Parent=MS.gene016955.t1 |
| chr5.1 | exon | 70577056 | 70577147 | 70577056 | ID=MS.gene016955.t1.exon4;Parent=MS.gene016955.t1 |
| chr5.1 | CDS | 70577056 | 70577147 | 70577056 | ID=cds.MS.gene016955.t1;Parent=MS.gene016955.t1 |
| chr5.1 | exon | 70577273 | 70577383 | 70577273 | ID=MS.gene016955.t1.exon5;Parent=MS.gene016955.t1 |
| chr5.1 | CDS | 70577273 | 70577383 | 70577273 | ID=cds.MS.gene016955.t1;Parent=MS.gene016955.t1 |
| Gene Sequence |
| Protein sequence |
