Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016992.t1 | XP_003617278.1 | 97.8 | 544 | 12 | 0 | 1 | 544 | 1 | 544 | 2.00E-280 | 974.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016992.t1 | F4HY56 | 32.0 | 228 | 102 | 6 | 20 | 247 | 41 | 215 | 1.5e-18 | 95.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016992.t1 | G7K365 | 97.8 | 544 | 12 | 0 | 1 | 544 | 1 | 544 | 1.4e-280 | 974.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene016992.t1 | TF | HB-other |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016992.t1 | MTR_5g089870 | 97.610 | 544 | 13 | 0 | 1 | 544 | 1 | 544 | 0.0 | 1105 |
| MS.gene016992.t1 | MTR_3g045830 | 56.080 | 551 | 189 | 8 | 1 | 543 | 1 | 506 | 0.0 | 548 |
| MS.gene016992.t1 | MTR_4g088375 | 53.571 | 56 | 26 | 0 | 20 | 75 | 33 | 88 | 4.38e-13 | 72.8 |
| MS.gene016992.t1 | MTR_4g088375 | 53.571 | 56 | 26 | 0 | 20 | 75 | 33 | 88 | 4.60e-13 | 72.8 |
| MS.gene016992.t1 | MTR_4g088375 | 53.571 | 56 | 26 | 0 | 20 | 75 | 33 | 88 | 4.68e-13 | 72.8 |
| MS.gene016992.t1 | MTR_2g014490 | 51.724 | 58 | 28 | 0 | 20 | 77 | 42 | 99 | 1.43e-12 | 71.2 |
| MS.gene016992.t1 | MTR_2g014490 | 51.724 | 58 | 28 | 0 | 20 | 77 | 42 | 99 | 1.49e-12 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016992.t1 | AT4G03250 | 39.254 | 563 | 262 | 15 | 3 | 544 | 4 | 507 | 5.62e-84 | 270 |
| MS.gene016992.t1 | AT1G28420 | 55.357 | 56 | 25 | 0 | 20 | 75 | 41 | 96 | 1.86e-14 | 77.4 |
Find 119 sgRNAs with CRISPR-Local
Find 347 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACACTCCTTTGCACATTCTT+TGG | 0.238382 | 5.2:-76279263 | None:intergenic |
| TTGACAGAAAAGCAAGTTTC+TGG | 0.248103 | 5.2:+76276280 | MS.gene016992:CDS |
| TCACTCCTTTGCGCTTTCTT+TGG | 0.251232 | 5.2:-76279326 | None:intergenic |
| GATTGCACCTTTCGGATTTA+AGG | 0.253961 | 5.2:-76276677 | None:intergenic |
| CCATTGCTCTCAACCTCTTT+AGG | 0.268733 | 5.2:-76276466 | None:intergenic |
| AAGAAAGAGGGCTATCTTCT+AGG | 0.323284 | 5.2:+76279408 | MS.gene016992:CDS |
| GTGCAGGATGAATTGTTTAA+AGG | 0.329048 | 5.2:+76279529 | MS.gene016992:intron |
| GTTGCATGATGTTCATGTTC+AGG | 0.329068 | 5.2:+76278965 | MS.gene016992:CDS |
| CAAAACGCCTGCACAGCTTA+AGG | 0.338384 | 5.2:+76276105 | MS.gene016992:CDS |
| CTGAAAAGTTTGTCTATGTT+TGG | 0.340704 | 5.2:-76279018 | None:intergenic |
| CAGGATCGTGGCAGTGGACT+TGG | 0.340987 | 5.2:+76276394 | MS.gene016992:CDS |
| ACTGCTGTTAAGAAGCAATT+AGG | 0.344355 | 5.2:+76276763 | MS.gene016992:CDS |
| ACATGGTGATTATAAGTATC+TGG | 0.364601 | 5.2:+76276441 | MS.gene016992:CDS |
| CCCATGTTGATTGCACCTTT+CGG | 0.370330 | 5.2:-76276685 | None:intergenic |
| CTCCTTCCATATGAGTATCT+TGG | 0.372564 | 5.2:-76278929 | None:intergenic |
| GGAACCTGTTTCATATTGTA+TGG | 0.374331 | 5.2:-76279773 | None:intergenic |
| CCTTTGCACATTCTTTGGAT+TGG | 0.379454 | 5.2:-76279258 | None:intergenic |
| GAATTTGATCCACTTCCTCC+TGG | 0.387621 | 5.2:+76276823 | MS.gene016992:CDS |
| CATGAACTGCGTCTTCAGTT+TGG | 0.394238 | 5.2:-76276858 | None:intergenic |
| GCAATTAGGAAGGAATTATC+AGG | 0.404766 | 5.2:+76276777 | MS.gene016992:CDS |
| CAATCAATCCAGTGAGGAAC+TGG | 0.405732 | 5.2:-76280562 | None:intergenic |
| TGCAGGATGAATTGTTTAAA+GGG | 0.406045 | 5.2:+76279530 | MS.gene016992:intron |
| TCCTTCCATATGAGTATCTT+GGG | 0.407012 | 5.2:-76278928 | None:intergenic |
| GCTAATTTCAATTCCTCTGT+TGG | 0.408111 | 5.2:-76276238 | None:intergenic |
| ACAACATTGCTAAGAATCAT+AGG | 0.408486 | 5.2:+76279114 | MS.gene016992:CDS |
| CAAACTGAAGACGCAGTTCA+TGG | 0.411080 | 5.2:+76276859 | MS.gene016992:CDS |
| CTAGAAGGCTCCATCTCATA+TGG | 0.414116 | 5.2:-76276634 | None:intergenic |
| CTTGGTTCTATCTCAGCAAC+AGG | 0.414880 | 5.2:-76279794 | None:intergenic |
| AAAACGCCTGCACAGCTTAA+GGG | 0.415864 | 5.2:+76276106 | MS.gene016992:CDS |
| TATCGCGATGCAGGTGGAGC+AGG | 0.417846 | 5.2:+76279574 | MS.gene016992:CDS |
| ATTGCACCTTTCGGATTTAA+GGG | 0.420903 | 5.2:-76276676 | None:intergenic |
| AGAGTCTTCGTACAAATCTA+AGG | 0.421428 | 5.2:-76279075 | None:intergenic |
| TCAACCATACAATATGAAAC+AGG | 0.427437 | 5.2:+76279769 | MS.gene016992:CDS |
| CAAGTCCACTGCCACGATCC+TGG | 0.429748 | 5.2:-76276393 | None:intergenic |
| GATGCTTTCAAATGAGACTA+TGG | 0.432046 | 5.2:+76279597 | MS.gene016992:CDS |
| GAAGAGCAGGATCAGCAATA+TGG | 0.436376 | 5.2:-76278416 | None:intergenic |
| AAAGAAGAAGCAAATGCTAA+TGG | 0.457102 | 5.2:+76276343 | MS.gene016992:CDS |
| TCCAATCCCTTAAGCTGTGC+AGG | 0.458833 | 5.2:-76276112 | None:intergenic |
| CAGGAAGATGGTCCACTACT+TGG | 0.459717 | 5.2:+76276796 | MS.gene016992:CDS |
| GCTCCATCTCATATGGATCT+TGG | 0.461565 | 5.2:-76276627 | None:intergenic |
| CATATGGAAGGAGTTGACTT+TGG | 0.462273 | 5.2:+76278939 | MS.gene016992:CDS |
| TTTGTCTATGTTTGGTACCA+TGG | 0.463442 | 5.2:-76279010 | None:intergenic |
| GGATTCCAAGCGTGGTGTTG+AGG | 0.467670 | 5.2:+76279139 | MS.gene016992:CDS |
| TTTCTTCATAGCGATCACTA+TGG | 0.468844 | 5.2:-76279187 | None:intergenic |
| GATTCCAAGCGTGGTGTTGA+GGG | 0.471960 | 5.2:+76279140 | MS.gene016992:CDS |
| AGAGCTTTACTATATCTAGA+AGG | 0.474291 | 5.2:-76276649 | None:intergenic |
| TCAAATGCCCCAGGAGGAAG+TGG | 0.480809 | 5.2:-76276832 | None:intergenic |
| TCTGGAGAATTCAGAAGAGC+AGG | 0.481510 | 5.2:-76278429 | None:intergenic |
| CATACCCTCAACACCACGCT+TGG | 0.482706 | 5.2:-76279144 | None:intergenic |
| GTCATCCAGGATCGTGGCAG+TGG | 0.484263 | 5.2:+76276388 | MS.gene016992:CDS |
| GCCTGCACAGCTTAAGGGAT+TGG | 0.485122 | 5.2:+76276111 | MS.gene016992:CDS |
| GATTTGTACGAAGACTCTAC+TGG | 0.489485 | 5.2:+76279080 | MS.gene016992:CDS |
| GGGAAGTCTGAATGTTTGAC+TGG | 0.495920 | 5.2:-76279215 | None:intergenic |
| TGCTGATACCAGTTCCTCAC+TGG | 0.497663 | 5.2:+76280554 | MS.gene016992:CDS |
| CAGAAAAGCAAGTTTCTGGA+TGG | 0.513041 | 5.2:+76276284 | MS.gene016992:CDS |
| TGGTTCCCAAGATACTCATA+TGG | 0.513127 | 5.2:+76278923 | MS.gene016992:CDS |
| AAATTCTTCACAACAATGGA+AGG | 0.521130 | 5.2:+76275314 | None:intergenic |
| AACATGGGATATAAGCCATC+GGG | 0.524849 | 5.2:+76276700 | MS.gene016992:CDS |
| TCTAAGGAAGAGTTCCTGCC+AGG | 0.525417 | 5.2:-76279059 | None:intergenic |
| AATTTGATCCACTTCCTCCT+GGG | 0.526950 | 5.2:+76276824 | MS.gene016992:CDS |
| TCGTTCAAGCGGTGTCATCC+AGG | 0.527070 | 5.2:+76276375 | MS.gene016992:CDS |
| ATTGTTTAAAGGGGACAGAA+AGG | 0.527281 | 5.2:+76279540 | MS.gene016992:CDS |
| TTCTGAAAATGTCAGTGGAA+TGG | 0.528577 | 5.2:+76276546 | MS.gene016992:CDS |
| GTTTGGCATTCAAATGCCCC+AGG | 0.531719 | 5.2:-76276841 | None:intergenic |
| GAATTGTGGATTGAGTTTGA+AGG | 0.540955 | 5.2:-76279365 | None:intergenic |
| ATCGGGATATTTGAAAGTGA+AGG | 0.542663 | 5.2:+76276717 | MS.gene016992:CDS |
| GCAGGATCAGCAATATGGTA+TGG | 0.543728 | 5.2:-76278411 | None:intergenic |
| GCTATCTTCTAGGATGACTA+AGG | 0.550617 | 5.2:+76279418 | MS.gene016992:CDS |
| CAAGAACGTTTGTATCCTCA+AGG | 0.550906 | 5.2:+76276604 | MS.gene016992:CDS |
| TAAGTATCTGGATCCTAAAG+AGG | 0.555927 | 5.2:+76276453 | MS.gene016992:CDS |
| GGAAGGAATTATCAGGAAGA+TGG | 0.556235 | 5.2:+76276784 | MS.gene016992:CDS |
| TTCACTTTCAAATATCCCGA+TGG | 0.557109 | 5.2:-76276715 | None:intergenic |
| CCACAGAACCTCGAGAATTG+TGG | 0.558056 | 5.2:-76279379 | None:intergenic |
| TCATATGGATCTTGGCCTTG+AGG | 0.561124 | 5.2:-76276619 | None:intergenic |
| CCACAATTCTCGAGGTTCTG+TGG | 0.566754 | 5.2:+76279379 | MS.gene016992:CDS |
| ATCGCGATGCAGGTGGAGCA+GGG | 0.572378 | 5.2:+76279575 | MS.gene016992:CDS |
| AAGCAATATCGCGATGCAGG+TGG | 0.577401 | 5.2:+76279568 | MS.gene016992:CDS |
| CAGATATGACGTACGGACGC+AGG | 0.578687 | 5.2:+76276515 | MS.gene016992:CDS |
| AGGCCAAGATCCATATGAGA+TGG | 0.579497 | 5.2:+76276624 | MS.gene016992:CDS |
| TCCGAAAGGTGCAATCAACA+TGG | 0.580879 | 5.2:+76276684 | MS.gene016992:CDS |
| GATTCATATTATACTAAACA+TGG | 0.583805 | 5.2:+76278903 | MS.gene016992:CDS |
| CTACTTACAGAGCTAAGACC+AGG | 0.590912 | 5.2:-76278474 | None:intergenic |
| TCCCAAGATACTCATATGGA+AGG | 0.591524 | 5.2:+76278927 | MS.gene016992:CDS |
| AACTCAATCCACAATTCTCG+AGG | 0.592657 | 5.2:+76279371 | MS.gene016992:CDS |
| CAAGATAAGAAAGCTTTCCA+TGG | 0.592693 | 5.2:+76278993 | MS.gene016992:CDS |
| CAACATGGGATATAAGCCAT+CGG | 0.596722 | 5.2:+76276699 | MS.gene016992:CDS |
| ATTTGATCCACTTCCTCCTG+GGG | 0.597335 | 5.2:+76276825 | MS.gene016992:CDS |
| TCGGGATATTTGAAAGTGAA+GGG | 0.606990 | 5.2:+76276718 | MS.gene016992:CDS |
| CCTAAAGAGGTTGAGAGCAA+TGG | 0.608573 | 5.2:+76276466 | MS.gene016992:CDS |
| TCATCCTCGCTAAAGCTAGA+CGG | 0.613881 | 5.2:-76280528 | None:intergenic |
| CTGTGGATACTGAAGAAAGA+GGG | 0.615063 | 5.2:+76279396 | MS.gene016992:CDS |
| TCCACAGTGAAAAGTCGACC+TGG | 0.615507 | 5.2:+76278456 | MS.gene016992:CDS |
| CAGACAAATCGCGATTGTAG+AGG | 0.616427 | 5.2:-76276489 | None:intergenic |
| GTTCCTGCCAGGAAAACGAC+TGG | 0.617478 | 5.2:-76279048 | None:intergenic |
| TCAAATTCTACACCAAGTAG+TGG | 0.621557 | 5.2:-76276808 | None:intergenic |
| CATAGGAAGGATTCCAAGCG+TGG | 0.623253 | 5.2:+76279131 | MS.gene016992:CDS |
| CATTGCTAAGAATCATAGGA+AGG | 0.626755 | 5.2:+76279118 | MS.gene016992:CDS |
| ATTGAAATTAGCAATTGCTG+AGG | 0.629418 | 5.2:+76276249 | MS.gene016992:CDS |
| TCTGTTGCAGATATGACGTA+CGG | 0.637863 | 5.2:+76276508 | MS.gene016992:CDS |
| CTTCCACCCTTAAATCCGAA+AGG | 0.637927 | 5.2:+76276670 | MS.gene016992:CDS |
| AGCGGTGTCATCCAGGATCG+TGG | 0.640192 | 5.2:+76276382 | MS.gene016992:CDS |
| GCAGGATGAATTGTTTAAAG+GGG | 0.640528 | 5.2:+76279531 | MS.gene016992:intron |
| TCGTGTGGAAGCAGTAAACA+TGG | 0.646504 | 5.2:+76276424 | MS.gene016992:CDS |
| CTGTTAAGAAGCAATTAGGA+AGG | 0.648535 | 5.2:+76276767 | MS.gene016992:CDS |
| TCTGTGGATACTGAAGAAAG+AGG | 0.660423 | 5.2:+76279395 | MS.gene016992:CDS |
| CCGAAAGGTGCAATCAACAT+GGG | 0.662695 | 5.2:+76276685 | MS.gene016992:CDS |
| CCAATCCAAAGAATGTGCAA+AGG | 0.663942 | 5.2:+76279258 | MS.gene016992:CDS |
| GGACTTGGACAAGATTCGTG+TGG | 0.667990 | 5.2:+76276409 | MS.gene016992:CDS |
| GCACCTTTCGGATTTAAGGG+TGG | 0.674376 | 5.2:-76276673 | None:intergenic |
| GGACGACAAGATCGTTCAAG+CGG | 0.685566 | 5.2:+76276364 | MS.gene016992:CDS |
| TGGCATTCAAATGCCCCAGG+AGG | 0.687115 | 5.2:-76276838 | None:intergenic |
| TCAATCCAAAGAAAGCGCAA+AGG | 0.687671 | 5.2:+76279321 | MS.gene016992:CDS |
| GGAAGTCTGAATGTTTGACT+GGG | 0.689472 | 5.2:-76279214 | None:intergenic |
| AGAGCACAAATATCCAACAG+AGG | 0.705663 | 5.2:+76276225 | MS.gene016992:intron |
| AGAAGAAAATAAAGTCTCTG+CGG | 0.706177 | 5.2:+76276060 | MS.gene016992:CDS |
| TAGAACCAAGGAAAACTCAG+AGG | 0.706448 | 5.2:+76279807 | MS.gene016992:CDS |
| GATGCCGTCTAGCTTTAGCG+AGG | 0.724075 | 5.2:+76280524 | MS.gene016992:CDS |
| ACAAAACAATCAATCCAGTG+AGG | 0.737591 | 5.2:-76280568 | None:intergenic |
| CTGTTGCTGAGATAGAACCA+AGG | 0.743299 | 5.2:+76279795 | MS.gene016992:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATAAAATAATTTAAATAAC+TGG | - | chr5.2:76277350-76277369 | None:intergenic | 10.0% |
| !! | TTAATCAAATTAATTTCATT+CGG | + | chr5.2:76280372-76280391 | MS.gene016992:intron | 10.0% |
| !!! | TTTATTTTCTTAATTTTTAC+TGG | + | chr5.2:76280442-76280461 | MS.gene016992:intron | 10.0% |
| !!! | TTTTGATTATAATTGAAATT+AGG | + | chr5.2:76275580-76275599 | MS.gene016992:intron | 10.0% |
| !!! | TTTTTGTTGTTATAATTATT+TGG | + | chr5.2:76275776-76275795 | MS.gene016992:intron | 10.0% |
| !! | AGAGCAAAAATAAATTATAT+TGG | - | chr5.2:76278231-76278250 | None:intergenic | 15.0% |
| !!! | TTAATTAGTTTCCTTAAAAT+TGG | + | chr5.2:76277758-76277777 | MS.gene016992:intron | 15.0% |
| !! | AATTAAATGACTTGAAACAA+TGG | - | chr5.2:76278722-76278741 | None:intergenic | 20.0% |
| !! | AGCAAAAAAAGATCTAAATT+AGG | - | chr5.2:76275641-76275660 | None:intergenic | 20.0% |
| !! | ATGATGCTATTCTTAAAATT+TGG | + | chr5.2:76277926-76277945 | MS.gene016992:intron | 20.0% |
| !! | ATTCATTTATGTTATACAAC+CGG | + | chr5.2:76277671-76277690 | MS.gene016992:intron | 20.0% |
| !! | ATTGAAATTGAATCAATGTT+AGG | + | chr5.2:76275419-76275438 | MS.gene016992:intron | 20.0% |
| !! | GATTCATATTATACTAAACA+TGG | + | chr5.2:76278903-76278922 | MS.gene016992:CDS | 20.0% |
| !! | GTTTCATATAACTAATAGAA+CGG | - | chr5.2:76276928-76276947 | None:intergenic | 20.0% |
| !! | TATTGAAAGCGAAAATAAAT+CGG | - | chr5.2:76278302-76278321 | None:intergenic | 20.0% |
| !! | TGACATAAAGACTTAAATTT+GGG | + | chr5.2:76275500-76275519 | MS.gene016992:intron | 20.0% |
| !! | TTGACATAAAGACTTAAATT+TGG | + | chr5.2:76275499-76275518 | MS.gene016992:intron | 20.0% |
| !! | TTTATTCTTATTAGCGATTT+GGG | + | chr5.2:76275358-76275377 | MS.gene016992:intron | 20.0% |
| !! | TTTCATATAACTAATAGAAC+GGG | - | chr5.2:76276927-76276946 | None:intergenic | 20.0% |
| !!! | AAATTTAGAATATAGGTTCT+AGG | + | chr5.2:76277830-76277849 | MS.gene016992:intron | 20.0% |
| !!! | ATGAAACTAAAATGTTGTTT+AGG | + | chr5.2:76276941-76276960 | MS.gene016992:intron | 20.0% |
| !!! | GAAATATTTCTAGAAAAACA+TGG | - | chr5.2:76278256-76278275 | None:intergenic | 20.0% |
| !!! | GGATTAGAAATTTAGAATAT+AGG | + | chr5.2:76277823-76277842 | MS.gene016992:intron | 20.0% |
| !!! | TTTGATTTTTCAAAACTGTT+AGG | + | chr5.2:76277429-76277448 | MS.gene016992:intron | 20.0% |
| !!! | TTTTATTCTTATTAGCGATT+TGG | + | chr5.2:76275357-76275376 | MS.gene016992:intron | 20.0% |
| ! | AAAATTAAATGCAGCTGAAA+TGG | + | chr5.2:76278602-76278621 | MS.gene016992:intron | 25.0% |
| ! | AACTTCTTACTTTGGTTAAA+GGG | + | chr5.2:76278659-76278678 | MS.gene016992:intron | 25.0% |
| ! | AAGAAGTGAATGATATTTGT+AGG | + | chr5.2:76278686-76278705 | MS.gene016992:intron | 25.0% |
| ! | AATGTTCAATAGTAAGCTTT+CGG | + | chr5.2:76279965-76279984 | MS.gene016992:intron | 25.0% |
| ! | AATTACTATGAGCACTTATA+CGG | - | chr5.2:76278783-76278802 | None:intergenic | 25.0% |
| ! | ACATATAAATAGACAGATGT+AGG | + | chr5.2:76277546-76277565 | MS.gene016992:intron | 25.0% |
| ! | AGAAAATAAAACTGTGATGT+TGG | - | chr5.2:76280432-76280451 | None:intergenic | 25.0% |
| ! | AGTTAAAGAAATAAGCTTTC+TGG | + | chr5.2:76275823-76275842 | MS.gene016992:intron | 25.0% |
| ! | ATAAGATATACAACAATCAC+AGG | - | chr5.2:76275952-76275971 | None:intergenic | 25.0% |
| ! | ATATATAGTGAGAAAATGAG+AGG | + | chr5.2:76277580-76277599 | MS.gene016992:intron | 25.0% |
| ! | ATCCTAATACCTTAAAAACA+CGG | - | chr5.2:76277807-76277826 | None:intergenic | 25.0% |
| ! | ATCTTCATTAAAGAGGAAAA+AGG | - | chr5.2:76280041-76280060 | None:intergenic | 25.0% |
| ! | ATTGCAAGAGAAACTTTAAA+CGG | + | chr5.2:76278739-76278758 | MS.gene016992:intron | 25.0% |
| ! | CAAATCAATGATGATTTACA+AGG | + | chr5.2:76278574-76278593 | MS.gene016992:intron | 25.0% |
| ! | CAACAACTATATTAGAATCT+GGG | + | chr5.2:76278040-76278059 | MS.gene016992:intron | 25.0% |
| ! | CAATTTATTCTGCTTACAAA+TGG | + | chr5.2:76279478-76279497 | MS.gene016992:intron | 25.0% |
| ! | CATGGAAAAACTTAATTACT+AGG | - | chr5.2:76278532-76278551 | None:intergenic | 25.0% |
| ! | CTTATCAAGTTAATTGTCAT+TGG | - | chr5.2:76277240-76277259 | None:intergenic | 25.0% |
| ! | GACATAAAGACTTAAATTTG+GGG | + | chr5.2:76275501-76275520 | MS.gene016992:intron | 25.0% |
| ! | GGTTGTATAACATAAATGAA+TGG | - | chr5.2:76277672-76277691 | None:intergenic | 25.0% |
| ! | TAAAAAATTGAGCTACATCA+AGG | - | chr5.2:76277465-76277484 | None:intergenic | 25.0% |
| ! | TAACCAAAGTAAGAAGTTAA+AGG | - | chr5.2:76278657-76278676 | None:intergenic | 25.0% |
| ! | TAACTTCTTACTTTGGTTAA+AGG | + | chr5.2:76278658-76278677 | MS.gene016992:intron | 25.0% |
| ! | TCAACAACTATATTAGAATC+TGG | + | chr5.2:76278039-76278058 | MS.gene016992:intron | 25.0% |
| ! | TCTATCCTAAATATGATACT+GGG | - | chr5.2:76277904-76277923 | None:intergenic | 25.0% |
| ! | TGTTAGTATTAATACTACCA+AGG | + | chr5.2:76277214-76277233 | MS.gene016992:intron | 25.0% |
| ! | TTAGGTTAGAATCTACAATA+TGG | + | chr5.2:76275437-76275456 | MS.gene016992:intron | 25.0% |
| ! | TTCTTACCTTTGTATTGTTA+TGG | + | chr5.2:76278374-76278393 | MS.gene016992:intron | 25.0% |
| !! | AATTAAGTTTTTCCATGGAA+TGG | + | chr5.2:76278535-76278554 | MS.gene016992:intron | 25.0% |
| !! | ATCATTTAGGATAAAGGAAT+AGG | + | chr5.2:76276989-76277008 | MS.gene016992:intron | 25.0% |
| !! | ATCTTTTATCCTTTAACCTT+CGG | - | chr5.2:76276318-76276337 | None:intergenic | 25.0% |
| !! | ATTAAGTTTTTCCATGGAAT+GGG | + | chr5.2:76278536-76278555 | MS.gene016992:intron | 25.0% |
| !! | CAATGACAATTAACTTGATA+AGG | + | chr5.2:76277238-76277257 | MS.gene016992:intron | 25.0% |
| !! | CTAGTAATTAAGTTTTTCCA+TGG | + | chr5.2:76278530-76278549 | MS.gene016992:intron | 25.0% |
| !! | GAATAAGCTATCCAATTTTA+AGG | - | chr5.2:76277772-76277791 | None:intergenic | 25.0% |
| !! | TGTTTTCATAGTTATACTGT+GGG | - | chr5.2:76279238-76279257 | None:intergenic | 25.0% |
| !! | TTCTTAATTTTTACTGGATG+TGG | + | chr5.2:76280448-76280467 | MS.gene016992:intron | 25.0% |
| !! | TTTATCTAGTCCATATTTTG+AGG | + | chr5.2:76277725-76277744 | MS.gene016992:intron | 25.0% |
| !!! | TGATTTTCTGAAAGCATAAT+AGG | - | chr5.2:76279934-76279953 | None:intergenic | 25.0% |
| !!! | TTATCTAGTCCATATTTTGA+GGG | + | chr5.2:76277726-76277745 | MS.gene016992:intron | 25.0% |
| AAAAACACGGCATTATCTTT+CGG | - | chr5.2:76277794-76277813 | None:intergenic | 30.0% | |
| AAAATGAGAACGCATTAGAA+AGG | - | chr5.2:76278501-76278520 | None:intergenic | 30.0% | |
| AAAGAAGAAGCAAATGCTAA+TGG | + | chr5.2:76276343-76276362 | MS.gene016992:CDS | 30.0% | |
| AACAATGTAGCTGATCATTT+AGG | + | chr5.2:76276976-76276995 | MS.gene016992:intron | 30.0% | |
| ACAACATTGCTAAGAATCAT+AGG | + | chr5.2:76279114-76279133 | MS.gene016992:CDS | 30.0% | |
| ACATGGTGATTATAAGTATC+TGG | + | chr5.2:76276441-76276460 | MS.gene016992:CDS | 30.0% | |
| AGAAAGTGAGTCAAACTTAA+GGG | + | chr5.2:76275537-76275556 | MS.gene016992:intron | 30.0% | |
| AGAAGAAAATAAAGTCTCTG+CGG | + | chr5.2:76276060-76276079 | MS.gene016992:CDS | 30.0% | |
| AGAGCTTTACTATATCTAGA+AGG | - | chr5.2:76276652-76276671 | None:intergenic | 30.0% | |
| AGCATAATAATCTTTGTGCA+AGG | + | chr5.2:76278185-76278204 | MS.gene016992:intron | 30.0% | |
| ATAAATAGACAGATGTAGGT+AGG | + | chr5.2:76277550-76277569 | MS.gene016992:intron | 30.0% | |
| ATTGAAATTAGCAATTGCTG+AGG | + | chr5.2:76276249-76276268 | MS.gene016992:CDS | 30.0% | |
| CATCACGTTGTAATAATGTT+AGG | + | chr5.2:76277019-76277038 | MS.gene016992:intron | 30.0% | |
| CTGAAAAGTTTGTCTATGTT+TGG | - | chr5.2:76279021-76279040 | None:intergenic | 30.0% | |
| GAAATATTTCATCGTAGCTA+AGG | + | chr5.2:76278266-76278285 | MS.gene016992:intron | 30.0% | |
| GAATGCTTAAAGATAGATCT+CGG | + | chr5.2:76277066-76277085 | MS.gene016992:intron | 30.0% | |
| GAATTAGTATTTGCTTGATC+TGG | + | chr5.2:76277504-76277523 | MS.gene016992:intron | 30.0% | |
| GGCTTATAAGTTATGACTTA+AGG | - | chr5.2:76277329-76277348 | None:intergenic | 30.0% | |
| GTCTATCCTAAATATGATAC+TGG | - | chr5.2:76277905-76277924 | None:intergenic | 30.0% | |
| TAGCATCCATAACAATACAA+AGG | - | chr5.2:76278383-76278402 | None:intergenic | 30.0% | |
| TCAACCATACAATATGAAAC+AGG | + | chr5.2:76279769-76279788 | MS.gene016992:CDS | 30.0% | |
| TCATGTATGAGATTTCATGT+TGG | + | chr5.2:76275891-76275910 | MS.gene016992:intron | 30.0% | |
| TCCTCTTATCTTCATTAAAG+AGG | - | chr5.2:76280048-76280067 | None:intergenic | 30.0% | |
| TCCTCTTTAATGAAGATAAG+AGG | + | chr5.2:76280044-76280063 | MS.gene016992:intron | 30.0% | |
| TGCAATTATGAGAAGAATAC+CGG | - | chr5.2:76277693-76277712 | None:intergenic | 30.0% | |
| TGCAGGATGAATTGTTTAAA+GGG | + | chr5.2:76279530-76279549 | MS.gene016992:intron | 30.0% | |
| TTCAACAAAAATCATCACAG+AGG | - | chr5.2:76276183-76276202 | None:intergenic | 30.0% | |
| TTCATTAAAGAGGAAAAAGG+TGG | - | chr5.2:76280038-76280057 | None:intergenic | 30.0% | |
| ! | AGTCCTTTAACTTCTTACTT+TGG | + | chr5.2:76278651-76278670 | MS.gene016992:intron | 30.0% |
| ! | ATAATCACATTCTAGAGATG+CGG | - | chr5.2:76279647-76279666 | None:intergenic | 30.0% |
| ! | ATATGGATTGTTTGCATTAC+AGG | + | chr5.2:76275454-76275473 | MS.gene016992:intron | 30.0% |
| ! | GGATTGGAGAAATTTTATAC+GGG | + | chr5.2:76276127-76276146 | MS.gene016992:CDS | 30.0% |
| ! | GGGATTGGAGAAATTTTATA+CGG | + | chr5.2:76276126-76276145 | MS.gene016992:CDS | 30.0% |
| ! | GTGTTTTCATAGTTATACTG+TGG | - | chr5.2:76279239-76279258 | None:intergenic | 30.0% |
| ! | TAGCTGATCATTTAGGATAA+AGG | + | chr5.2:76276983-76277002 | MS.gene016992:intron | 30.0% |
| ! | TATGGATTGTTTGCATTACA+GGG | + | chr5.2:76275455-76275474 | MS.gene016992:intron | 30.0% |
| ! | TCAAACTTAAGGGTATGAAA+GGG | + | chr5.2:76275547-76275566 | MS.gene016992:intron | 30.0% |
| ! | TGTTGTTTAGGTTTGAAACT+TGG | + | chr5.2:76276953-76276972 | MS.gene016992:intron | 30.0% |
| ! | TTTGCATCAAACTTGCTTTA+TGG | + | chr5.2:76280286-76280305 | MS.gene016992:intron | 30.0% |
| ! | TTTTGCTTTGGTATGTGTAT+AGG | + | chr5.2:76279718-76279737 | MS.gene016992:intron | 30.0% |
| !! | AAGATAATGCCGTGTTTTTA+AGG | + | chr5.2:76277795-76277814 | MS.gene016992:intron | 30.0% |
| !! | CATTTTTCTGAAAATGTCAG+TGG | + | chr5.2:76276541-76276560 | MS.gene016992:CDS | 30.0% |
| AAAAACCGTCTTGTAAGGTA+AGG | + | chr5.2:76277970-76277989 | MS.gene016992:intron | 35.0% | |
| AACTAAACTAAACCCTGCTA+GGG | - | chr5.2:76280183-76280202 | None:intergenic | 35.0% | |
| AAGTAGATCCAAGTGGTTTA+TGG | - | chr5.2:76275677-76275696 | None:intergenic | 35.0% | |
| ACTGCTGTTAAGAAGCAATT+AGG | + | chr5.2:76276763-76276782 | MS.gene016992:CDS | 35.0% | |
| AGAGTCTTCGTACAAATCTA+AGG | - | chr5.2:76279078-76279097 | None:intergenic | 35.0% | |
| AGTGTCCCAGTATCATATTT+AGG | + | chr5.2:76277896-76277915 | MS.gene016992:intron | 35.0% | |
| ATAACTAATAGAACGGGAAC+TGG | - | chr5.2:76276921-76276940 | None:intergenic | 35.0% | |
| ATCGGGATATTTGAAAGTGA+AGG | + | chr5.2:76276717-76276736 | MS.gene016992:CDS | 35.0% | |
| ATGTTCATGTGCTATGCATT+GGG | + | chr5.2:76277156-76277175 | MS.gene016992:intron | 35.0% | |
| ATTCAGTTGTAGTCAAACTG+AGG | - | chr5.2:76280237-76280256 | None:intergenic | 35.0% | |
| ATTGCACCTTTCGGATTTAA+GGG | - | chr5.2:76276679-76276698 | None:intergenic | 35.0% | |
| ATTGTTTAAAGGGGACAGAA+AGG | + | chr5.2:76279540-76279559 | MS.gene016992:CDS | 35.0% | |
| CAAGATAAGAAAGCTTTCCA+TGG | + | chr5.2:76278993-76279012 | MS.gene016992:CDS | 35.0% | |
| CAGTTGCTACATTTATGAAC+AGG | - | chr5.2:76278819-76278838 | None:intergenic | 35.0% | |
| CATTGCTAAGAATCATAGGA+AGG | + | chr5.2:76279118-76279137 | MS.gene016992:CDS | 35.0% | |
| CGTTTGCTCAAGTCTTTATA+AGG | + | chr5.2:76278098-76278117 | MS.gene016992:intron | 35.0% | |
| CTACTTTCTGTGTGAGATAA+GGG | + | chr5.2:76275691-76275710 | MS.gene016992:intron | 35.0% | |
| CTCTTAAAAACCGTCTTGTA+AGG | + | chr5.2:76277965-76277984 | MS.gene016992:intron | 35.0% | |
| CTGTTAAGAAGCAATTAGGA+AGG | + | chr5.2:76276767-76276786 | MS.gene016992:CDS | 35.0% | |
| CTTGACTATTAGTGTATCGT+GGG | - | chr5.2:76277622-76277641 | None:intergenic | 35.0% | |
| GAAAGAAAAACGGGGAAATA+GGG | - | chr5.2:76276899-76276918 | None:intergenic | 35.0% | |
| GAGAAAGTGAGTCAAACTTA+AGG | + | chr5.2:76275536-76275555 | MS.gene016992:intron | 35.0% | |
| GATGCTTTCAAATGAGACTA+TGG | + | chr5.2:76279597-76279616 | MS.gene016992:CDS | 35.0% | |
| GCAATTAGGAAGGAATTATC+AGG | + | chr5.2:76276777-76276796 | MS.gene016992:CDS | 35.0% | |
| GCACAATGTTGTTAGAAACA+GGG | - | chr5.2:76280474-76280493 | None:intergenic | 35.0% | |
| GCAGGATGAATTGTTTAAAG+GGG | + | chr5.2:76279531-76279550 | MS.gene016992:intron | 35.0% | |
| GCTAATTTCAATTCCTCTGT+TGG | - | chr5.2:76276241-76276260 | None:intergenic | 35.0% | |
| GGAACCTGTTTCATATTGTA+TGG | - | chr5.2:76279776-76279795 | None:intergenic | 35.0% | |
| GTGCAGGATGAATTGTTTAA+AGG | + | chr5.2:76279529-76279548 | MS.gene016992:intron | 35.0% | |
| TAAAAGAGAGTGAGAAAGCA+GGG | - | chr5.2:76278862-76278881 | None:intergenic | 35.0% | |
| TAAACTTCTTGCTTCTCGTT+TGG | + | chr5.2:76276011-76276030 | MS.gene016992:intron | 35.0% | |
| TAAGCTCCAAAACTTCTAAG+AGG | - | chr5.2:76279878-76279897 | None:intergenic | 35.0% | |
| TAAGTATCTGGATCCTAAAG+AGG | + | chr5.2:76276453-76276472 | MS.gene016992:CDS | 35.0% | |
| TCAAATTCTACACCAAGTAG+TGG | - | chr5.2:76276811-76276830 | None:intergenic | 35.0% | |
| TCCTTCCATATGAGTATCTT+GGG | - | chr5.2:76278931-76278950 | None:intergenic | 35.0% | |
| TCGGGATATTTGAAAGTGAA+GGG | + | chr5.2:76276718-76276737 | MS.gene016992:CDS | 35.0% | |
| TCTACTTTCTGTGTGAGATA+AGG | + | chr5.2:76275690-76275709 | MS.gene016992:intron | 35.0% | |
| TCTTGACTATTAGTGTATCG+TGG | - | chr5.2:76277623-76277642 | None:intergenic | 35.0% | |
| TGCACAATGTTGTTAGAAAC+AGG | - | chr5.2:76280475-76280494 | None:intergenic | 35.0% | |
| TGTGATGTTGGTGTGTATTT+GGG | - | chr5.2:76280420-76280439 | None:intergenic | 35.0% | |
| TTCACTTTCAAATATCCCGA+TGG | - | chr5.2:76276718-76276737 | None:intergenic | 35.0% | |
| TTCTTGAAACAACTTAGTCC+TGG | - | chr5.2:76277409-76277428 | None:intergenic | 35.0% | |
| TTGACAGAAAAGCAAGTTTC+TGG | + | chr5.2:76276280-76276299 | MS.gene016992:CDS | 35.0% | |
| TTGGTAAATTGAGCTCAATG+TGG | + | chr5.2:76280094-76280113 | MS.gene016992:intron | 35.0% | |
| TTTCTTCATAGCGATCACTA+TGG | - | chr5.2:76279190-76279209 | None:intergenic | 35.0% | |
| TTTGTCTATGTTTGGTACCA+TGG | - | chr5.2:76279013-76279032 | None:intergenic | 35.0% | |
| ! | AAAAAGGTGGTTTTCACGAA+TGG | - | chr5.2:76280025-76280044 | None:intergenic | 35.0% |
| ! | AACCCAAAAAGCTAGCTTAA+GGG | + | chr5.2:76278071-76278090 | MS.gene016992:intron | 35.0% |
| ! | AAGTTAATTGTCATTGGCCT+TGG | - | chr5.2:76277234-76277253 | None:intergenic | 35.0% |
| ! | AGACTTAAATTTGGGGTCTT+TGG | + | chr5.2:76275508-76275527 | MS.gene016992:intron | 35.0% |
| ! | ATATTTTGTTGCATGTGTGC+AGG | + | chr5.2:76279513-76279532 | MS.gene016992:intron | 35.0% |
| ! | CAAACTTAAGGGTATGAAAG+GGG | + | chr5.2:76275548-76275567 | MS.gene016992:intron | 35.0% |
| ! | GAATTGTGGATTGAGTTTGA+AGG | - | chr5.2:76279368-76279387 | None:intergenic | 35.0% |
| ! | GACTTAAATTTGGGGTCTTT+GGG | + | chr5.2:76275509-76275528 | MS.gene016992:intron | 35.0% |
| ! | GATTTGGGTCATTCATTTTG+TGG | + | chr5.2:76275373-76275392 | MS.gene016992:intron | 35.0% |
| ! | GGAGAAATTTTATACGGGTA+GGG | + | chr5.2:76276132-76276151 | MS.gene016992:intron | 35.0% |
| ! | GTCAAACTTAAGGGTATGAA+AGG | + | chr5.2:76275546-76275565 | MS.gene016992:intron | 35.0% |
| ! | TAATCACATTCTAGAGATGC+GGG | - | chr5.2:76279646-76279665 | None:intergenic | 35.0% |
| ! | TAGGGCATACCTTTTTACAA+AGG | - | chr5.2:76280165-76280184 | None:intergenic | 35.0% |
| ! | TGGAGAAATTTTATACGGGT+AGG | + | chr5.2:76276131-76276150 | MS.gene016992:intron | 35.0% |
| ! | TTCTGAAAATGTCAGTGGAA+TGG | + | chr5.2:76276546-76276565 | MS.gene016992:CDS | 35.0% |
| !! | CGGTTTTTAAGAGTTGAGTT+AGG | - | chr5.2:76277958-76277977 | None:intergenic | 35.0% |
| !! | CTAGAAGCACCTTTGTAAAA+AGG | + | chr5.2:76280153-76280172 | MS.gene016992:intron | 35.0% |
| !! | TATTTGTGCTCTGGAAACAA+AGG | - | chr5.2:76276217-76276236 | None:intergenic | 35.0% |
| !! | TTAGAATATAGGTTCTAGGC+TGG | + | chr5.2:76277834-76277853 | MS.gene016992:intron | 35.0% |
| !! | TTTACAAAGGTGCTTCTAGT+GGG | - | chr5.2:76280152-76280171 | None:intergenic | 35.0% |
| !!! | AGGTGTTGTTTTGCTTGTTT+AGG | + | chr5.2:76278205-76278224 | MS.gene016992:intron | 35.0% |
| !!! | GCAGAGACTTTATTTTCTTC+TGG | - | chr5.2:76276061-76276080 | None:intergenic | 35.0% |
| !!! | TGCCGTGTTTTTAAGGTATT+AGG | + | chr5.2:76277802-76277821 | MS.gene016992:intron | 35.0% |
| !!! | TTTTACAAAGGTGCTTCTAG+TGG | - | chr5.2:76280153-76280172 | None:intergenic | 35.0% |
| AAAAAGCAATATCGCGATGC+AGG | + | chr5.2:76279565-76279584 | MS.gene016992:CDS | 40.0% | |
| AAAAGAGAGTGAGAAAGCAG+GGG | - | chr5.2:76278861-76278880 | None:intergenic | 40.0% | |
| AACATGGGATATAAGCCATC+GGG | + | chr5.2:76276700-76276719 | MS.gene016992:CDS | 40.0% | |
| AACTCAATCCACAATTCTCG+AGG | + | chr5.2:76279371-76279390 | MS.gene016992:CDS | 40.0% | |
| AAGAAAGAGGGCTATCTTCT+AGG | + | chr5.2:76279408-76279427 | MS.gene016992:CDS | 40.0% | |
| AAGGCAAAATCACAAGGTGT+GGG | - | chr5.2:76280210-76280229 | None:intergenic | 40.0% | |
| AATTTGATCCACTTCCTCCT+GGG | + | chr5.2:76276824-76276843 | MS.gene016992:CDS | 40.0% | |
| ACACAGAAAGTAGATCCAAG+TGG | - | chr5.2:76275684-76275703 | None:intergenic | 40.0% | |
| ACACTCCTTTGCACATTCTT+TGG | - | chr5.2:76279266-76279285 | None:intergenic | 40.0% | |
| ACGGGAACTGGAAAGAAAAA+CGG | - | chr5.2:76276909-76276928 | None:intergenic | 40.0% | |
| ACTATTAGTGTATCGTGGGA+TGG | - | chr5.2:76277618-76277637 | None:intergenic | 40.0% | |
| AGAGCACAAATATCCAACAG+AGG | + | chr5.2:76276225-76276244 | MS.gene016992:intron | 40.0% | |
| AGCCACAAACCCTCAAAATA+TGG | - | chr5.2:76277738-76277757 | None:intergenic | 40.0% | |
| ATAGCACATGAACATGATGC+AGG | - | chr5.2:76277151-76277170 | None:intergenic | 40.0% | |
| ATGTCGTAACTCTAGTCGAT+GGG | + | chr5.2:76278008-76278027 | MS.gene016992:intron | 40.0% | |
| CAACATGGGATATAAGCCAT+CGG | + | chr5.2:76276699-76276718 | MS.gene016992:CDS | 40.0% | |
| CAAGAACGTTTGTATCCTCA+AGG | + | chr5.2:76276604-76276623 | MS.gene016992:CDS | 40.0% | |
| CATGTTCATGTGCTATGCAT+TGG | + | chr5.2:76277155-76277174 | MS.gene016992:intron | 40.0% | |
| CCAATCCAAAGAATGTGCAA+AGG | + | chr5.2:76279258-76279277 | MS.gene016992:CDS | 40.0% | |
| CCTTTGCACATTCTTTGGAT+TGG | - | chr5.2:76279261-76279280 | None:intergenic | 40.0% | |
| CTCCTTCCATATGAGTATCT+TGG | - | chr5.2:76278932-76278951 | None:intergenic | 40.0% | |
| CTGTGATGTTGGTGTGTATT+TGG | - | chr5.2:76280421-76280440 | None:intergenic | 40.0% | |
| CTGTGGATACTGAAGAAAGA+GGG | + | chr5.2:76279396-76279415 | MS.gene016992:CDS | 40.0% | |
| GAACTAAACTAAACCCTGCT+AGG | - | chr5.2:76280184-76280203 | None:intergenic | 40.0% | |
| GAAGTCCTTACCTTACAAGA+CGG | - | chr5.2:76277978-76277997 | None:intergenic | 40.0% | |
| GACTAGAGTTACGACATATG+TGG | - | chr5.2:76278005-76278024 | None:intergenic | 40.0% | |
| GATTGCACCTTTCGGATTTA+AGG | - | chr5.2:76276680-76276699 | None:intergenic | 40.0% | |
| GATTTGTACGAAGACTCTAC+TGG | + | chr5.2:76279080-76279099 | MS.gene016992:CDS | 40.0% | |
| GGAAAGAAAAACGGGGAAAT+AGG | - | chr5.2:76276900-76276919 | None:intergenic | 40.0% | |
| GGAAGGAATTATCAGGAAGA+TGG | + | chr5.2:76276784-76276803 | MS.gene016992:CDS | 40.0% | |
| GGAAGTCTGAATGTTTGACT+GGG | - | chr5.2:76279217-76279236 | None:intergenic | 40.0% | |
| GGGTCTTAACTTAAGGTTCA+CGG | + | chr5.2:76278151-76278170 | MS.gene016992:intron | 40.0% | |
| GGTTTGAAGGCAAAATCACA+AGG | - | chr5.2:76280216-76280235 | None:intergenic | 40.0% | |
| GTAAAAGAGAGTGAGAAAGC+AGG | - | chr5.2:76278863-76278882 | None:intergenic | 40.0% | |
| GTAGTCAAACTGAGGTTTGA+AGG | - | chr5.2:76280229-76280248 | None:intergenic | 40.0% | |
| GTCATTGACCATAAACCACT+TGG | + | chr5.2:76275666-76275685 | MS.gene016992:intron | 40.0% | |
| GTTGCATGATGTTCATGTTC+AGG | + | chr5.2:76278965-76278984 | MS.gene016992:CDS | 40.0% | |
| TACAGGGTAGATTGTTGCAA+TGG | + | chr5.2:76275471-76275490 | MS.gene016992:intron | 40.0% | |
| TAGAACCAAGGAAAACTCAG+AGG | + | chr5.2:76279807-76279826 | MS.gene016992:CDS | 40.0% | |
| TATGTCGTAACTCTAGTCGA+TGG | + | chr5.2:76278007-76278026 | MS.gene016992:intron | 40.0% | |
| TCCCAAGATACTCATATGGA+AGG | + | chr5.2:76278927-76278946 | MS.gene016992:CDS | 40.0% | |
| TCTGTGGATACTGAAGAAAG+AGG | + | chr5.2:76279395-76279414 | MS.gene016992:CDS | 40.0% | |
| TCTGTTGCAGATATGACGTA+CGG | + | chr5.2:76276508-76276527 | MS.gene016992:CDS | 40.0% | |
| TCTGTTGGATATTTGTGCTC+TGG | - | chr5.2:76276226-76276245 | None:intergenic | 40.0% | |
| TGAACATGATGCAGGTTAGA+TGG | - | chr5.2:76277143-76277162 | None:intergenic | 40.0% | |
| TGGTTCCCAAGATACTCATA+TGG | + | chr5.2:76278923-76278942 | MS.gene016992:CDS | 40.0% | |
| ! | ACCCAAAAAGCTAGCTTAAG+GGG | + | chr5.2:76278072-76278091 | MS.gene016992:intron | 40.0% |
| ! | CAAAACTTCTAAGAGGACGT+GGG | - | chr5.2:76279871-76279890 | None:intergenic | 40.0% |
| ! | CAACCCAAAAAGCTAGCTTA+AGG | + | chr5.2:76278070-76278089 | MS.gene016992:intron | 40.0% |
| ! | CAGAAAAGCAAGTTTCTGGA+TGG | + | chr5.2:76276284-76276303 | MS.gene016992:CDS | 40.0% |
| ! | CATATGGAAGGAGTTGACTT+TGG | + | chr5.2:76278939-76278958 | MS.gene016992:CDS | 40.0% |
| ! | CTTTTCACTGTGGAGATTTC+TGG | - | chr5.2:76278450-76278469 | None:intergenic | 40.0% |
| ! | GCACACATGATGTTTTGCTT+TGG | + | chr5.2:76279706-76279725 | MS.gene016992:intron | 40.0% |
| ! | GTTTTGTCACCGAAGGTTAA+AGG | + | chr5.2:76276306-76276325 | MS.gene016992:CDS | 40.0% |
| ! | TAAAAAGGTATGCCCTAGCA+GGG | + | chr5.2:76280168-76280187 | MS.gene016992:intron | 40.0% |
| ! | TCAATCCAAAGAAAGCGCAA+AGG | + | chr5.2:76279321-76279340 | MS.gene016992:CDS | 40.0% |
| ! | TTAAGGGTATGAAAGGGGTT+TGG | + | chr5.2:76275553-76275572 | MS.gene016992:intron | 40.0% |
| ! | TTCTAGAAATAACCTACCCC+AGG | - | chr5.2:76277103-76277122 | None:intergenic | 40.0% |
| !! | AGATAGATCTCGGTTTGCTA+TGG | + | chr5.2:76277076-76277095 | MS.gene016992:intron | 40.0% |
| !! | GATAGATCTCGGTTTGCTAT+GGG | + | chr5.2:76277077-76277096 | MS.gene016992:intron | 40.0% |
| !! | GCTATCTTCTAGGATGACTA+AGG | + | chr5.2:76279418-76279437 | MS.gene016992:CDS | 40.0% |
| !! | GGCGTTTTGAGCTTTCTTTT+CGG | - | chr5.2:76276094-76276113 | None:intergenic | 40.0% |
| !! | GGGGTAGGTTATTTCTAGAA+TGG | + | chr5.2:76277103-76277122 | MS.gene016992:intron | 40.0% |
| !! | GTCCATATTTTGAGGGTTTG+TGG | + | chr5.2:76277733-76277752 | MS.gene016992:intron | 40.0% |
| !!! | CTGTTTTTTCCAGCTAACCA+AGG | - | chr5.2:76280334-76280353 | None:intergenic | 40.0% |
| !!! | GAGCTTTTAGTTTTAGTGCC+AGG | + | chr5.2:76277388-76277407 | MS.gene016992:intron | 40.0% |
| AAAACGCCTGCACAGCTTAA+GGG | + | chr5.2:76276106-76276125 | MS.gene016992:CDS | 45.0% | |
| AAACATCATGTGTGCATGCG+TGG | - | chr5.2:76279701-76279720 | None:intergenic | 45.0% | |
| AACTTAAGGTTCACGGCACA+GGG | + | chr5.2:76278158-76278177 | MS.gene016992:intron | 45.0% | |
| ACGATATCGATCCCATTCCA+TGG | - | chr5.2:76278550-76278569 | None:intergenic | 45.0% | |
| AGGCCAAGATCCATATGAGA+TGG | + | chr5.2:76276624-76276643 | MS.gene016992:CDS | 45.0% | |
| AGGGTAGATTGTTGCAATGG+TGG | + | chr5.2:76275474-76275493 | MS.gene016992:intron | 45.0% | |
| ATTTGATCCACTTCCTCCTG+GGG | + | chr5.2:76276825-76276844 | MS.gene016992:CDS | 45.0% | |
| CAAAATCACAAGGTGTGGGA+TGG | - | chr5.2:76280206-76280225 | None:intergenic | 45.0% | |
| CAAACTGAAGACGCAGTTCA+TGG | + | chr5.2:76276859-76276878 | MS.gene016992:CDS | 45.0% | |
| CAGACAAATCGCGATTGTAG+AGG | - | chr5.2:76276492-76276511 | None:intergenic | 45.0% | |
| CATGAACTGCGTCTTCAGTT+TGG | - | chr5.2:76276861-76276880 | None:intergenic | 45.0% | |
| CCATTGCTCTCAACCTCTTT+AGG | - | chr5.2:76276469-76276488 | None:intergenic | 45.0% | |
| CCTAAAGAGGTTGAGAGCAA+TGG | + | chr5.2:76276466-76276485 | MS.gene016992:CDS | 45.0% | |
| CGATGTGGGGTCTTAACTTA+AGG | + | chr5.2:76278144-76278163 | MS.gene016992:intron | 45.0% | |
| CGGGAACTGGAAAGAAAAAC+GGG | - | chr5.2:76276908-76276927 | None:intergenic | 45.0% | |
| CTACTTACAGAGCTAAGACC+AGG | - | chr5.2:76278477-76278496 | None:intergenic | 45.0% | |
| CTAGAAGGCTCCATCTCATA+TGG | - | chr5.2:76276637-76276656 | None:intergenic | 45.0% | |
| CTGTTGCTGAGATAGAACCA+AGG | + | chr5.2:76279795-76279814 | MS.gene016992:CDS | 45.0% | |
| CTTCCACCCTTAAATCCGAA+AGG | + | chr5.2:76276670-76276689 | MS.gene016992:CDS | 45.0% | |
| GAAGAGCAGGATCAGCAATA+TGG | - | chr5.2:76278419-76278438 | None:intergenic | 45.0% | |
| GAAGGCAAAATCACAAGGTG+TGG | - | chr5.2:76280211-76280230 | None:intergenic | 45.0% | |
| GAATTTGATCCACTTCCTCC+TGG | + | chr5.2:76276823-76276842 | MS.gene016992:CDS | 45.0% | |
| GAGATAAGGGTTTGCACTGA+AGG | + | chr5.2:76275704-76275723 | MS.gene016992:intron | 45.0% | |
| GCAGGATCAGCAATATGGTA+TGG | - | chr5.2:76278414-76278433 | None:intergenic | 45.0% | |
| GCTCCATCTCATATGGATCT+TGG | - | chr5.2:76276630-76276649 | None:intergenic | 45.0% | |
| GGGAACTGGAAAGAAAAACG+GGG | - | chr5.2:76276907-76276926 | None:intergenic | 45.0% | |
| GGGAAGTCTGAATGTTTGAC+TGG | - | chr5.2:76279218-76279237 | None:intergenic | 45.0% | |
| TAACTTAAGGTTCACGGCAC+AGG | + | chr5.2:76278157-76278176 | MS.gene016992:intron | 45.0% | |
| TCACTCCTTTGCGCTTTCTT+TGG | - | chr5.2:76279329-76279348 | None:intergenic | 45.0% | |
| TCATCCTCGCTAAAGCTAGA+CGG | - | chr5.2:76280531-76280550 | None:intergenic | 45.0% | |
| TCGTGTGGAAGCAGTAAACA+TGG | + | chr5.2:76276424-76276443 | MS.gene016992:CDS | 45.0% | |
| TCTGGAGAATTCAGAAGAGC+AGG | - | chr5.2:76278432-76278451 | None:intergenic | 45.0% | |
| TTCATCGTAGCTAAGGTGCA+AGG | + | chr5.2:76278273-76278292 | MS.gene016992:intron | 45.0% | |
| ! | AAGGTGCTTCTAGTGGGATT+CGG | - | chr5.2:76280146-76280165 | None:intergenic | 45.0% |
| ! | CCAAAACTTCTAAGAGGACG+TGG | - | chr5.2:76279872-76279891 | None:intergenic | 45.0% |
| ! | CCACGTCCTCTTAGAAGTTT+TGG | + | chr5.2:76279869-76279888 | MS.gene016992:intron | 45.0% |
| ! | CCCATGTTGATTGCACCTTT+CGG | - | chr5.2:76276688-76276707 | None:intergenic | 45.0% |
| ! | CCGAAAGGTGCAATCAACAT+GGG | + | chr5.2:76276685-76276704 | MS.gene016992:CDS | 45.0% |
| ! | GTAAAAAGGTATGCCCTAGC+AGG | + | chr5.2:76280167-76280186 | MS.gene016992:intron | 45.0% |
| ! | TCCGAAAGGTGCAATCAACA+TGG | + | chr5.2:76276684-76276703 | MS.gene016992:CDS | 45.0% |
| !! | AGTAATGCCAGTCGTTTTCC+TGG | + | chr5.2:76279041-76279060 | MS.gene016992:CDS | 45.0% |
| !! | CTTGGTTCTATCTCAGCAAC+AGG | - | chr5.2:76279797-76279816 | None:intergenic | 45.0% |
| !! | TCATATGGATCTTGGCCTTG+AGG | - | chr5.2:76276622-76276641 | None:intergenic | 45.0% |
| !!! | GCCCCTTAAGCTAGCTTTTT+GGG | - | chr5.2:76278076-76278095 | None:intergenic | 45.0% |
| !!! | AATTTTTTAATATTTGTATT+TGG | + | chr5.2:76277476-76277495 | MS.gene016992:intron | 5.0% |
| AAGCAATATCGCGATGCAGG+TGG | + | chr5.2:76279568-76279587 | MS.gene016992:CDS | 50.0% | |
| ACCATATGCCCACTCGATGT+GGG | + | chr5.2:76278130-76278149 | MS.gene016992:intron | 50.0% | |
| AGTTAAGACCCCACATCGAG+TGG | - | chr5.2:76278142-76278161 | None:intergenic | 50.0% | |
| ATCATGTGTGCATGCGTGGA+AGG | - | chr5.2:76279697-76279716 | None:intergenic | 50.0% | |
| CAAAACGCCTGCACAGCTTA+AGG | + | chr5.2:76276105-76276124 | MS.gene016992:CDS | 50.0% | |
| CAGGAAGATGGTCCACTACT+TGG | + | chr5.2:76276796-76276815 | MS.gene016992:CDS | 50.0% | |
| CATAGGAAGGATTCCAAGCG+TGG | + | chr5.2:76279131-76279150 | MS.gene016992:CDS | 50.0% | |
| CCACAATTCTCGAGGTTCTG+TGG | + | chr5.2:76279379-76279398 | MS.gene016992:CDS | 50.0% | |
| CCACAGAACCTCGAGAATTG+TGG | - | chr5.2:76279382-76279401 | None:intergenic | 50.0% | |
| CTGAAGACGCAGTTCATGGT+AGG | + | chr5.2:76276863-76276882 | MS.gene016992:intron | 50.0% | |
| GAGCGTGAAGTCTGCAGTAA+TGG | + | chr5.2:76277864-76277883 | MS.gene016992:intron | 50.0% | |
| GCACCTTTCGGATTTAAGGG+TGG | - | chr5.2:76276676-76276695 | None:intergenic | 50.0% | |
| GGACGACAAGATCGTTCAAG+CGG | + | chr5.2:76276364-76276383 | MS.gene016992:CDS | 50.0% | |
| GGACTTGGACAAGATTCGTG+TGG | + | chr5.2:76276409-76276428 | MS.gene016992:CDS | 50.0% | |
| GTTAAGACCCCACATCGAGT+GGG | - | chr5.2:76278141-76278160 | None:intergenic | 50.0% | |
| GTTTGGCATTCAAATGCCCC+AGG | - | chr5.2:76276844-76276863 | None:intergenic | 50.0% | |
| TCCAATCCCTTAAGCTGTGC+AGG | - | chr5.2:76276115-76276134 | None:intergenic | 50.0% | |
| TCCACAGTGAAAAGTCGACC+TGG | + | chr5.2:76278456-76278475 | MS.gene016992:CDS | 50.0% | |
| TCTAAGGAAGAGTTCCTGCC+AGG | - | chr5.2:76279062-76279081 | None:intergenic | 50.0% | |
| TGCTGATACCAGTTCCTCAC+TGG | + | chr5.2:76280554-76280573 | MS.gene016992:CDS | 50.0% | |
| ! | GATTCCAAGCGTGGTGTTGA+GGG | + | chr5.2:76279140-76279159 | MS.gene016992:CDS | 50.0% |
| ! | GCTCACCTCTGAGTTTTCCT+TGG | - | chr5.2:76279815-76279834 | None:intergenic | 50.0% |
| ! | TTCTAAGAGGACGTGGGTGT+CGG | - | chr5.2:76279865-76279884 | None:intergenic | 50.0% |
| !! | ACCAGGTCGACTTTTCACTG+TGG | - | chr5.2:76278460-76278479 | None:intergenic | 50.0% |
| !! | AGCGCAAAGTGCTGCTTAGT+TGG | + | chr5.2:76280075-76280094 | MS.gene016992:intron | 50.0% |
| !!! | CGCCCCTTAAGCTAGCTTTT+TGG | - | chr5.2:76278077-76278096 | None:intergenic | 50.0% |
| !!! | CTGGATGGTTTTGTCACCGA+AGG | + | chr5.2:76276299-76276318 | MS.gene016992:CDS | 50.0% |
| ATGTGTGCATGCGTGGAAGG+AGG | - | chr5.2:76279694-76279713 | None:intergenic | 55.0% | |
| CAAGGGACACCTTGGTTAGC+TGG | + | chr5.2:76280322-76280341 | MS.gene016992:intron | 55.0% | |
| CAGATATGACGTACGGACGC+AGG | + | chr5.2:76276515-76276534 | MS.gene016992:CDS | 55.0% | |
| CATACCCTCAACACCACGCT+TGG | - | chr5.2:76279147-76279166 | None:intergenic | 55.0% | |
| CCATATGCCCACTCGATGTG+GGG | + | chr5.2:76278131-76278150 | MS.gene016992:intron | 55.0% | |
| GACCATATGCCCACTCGATG+TGG | + | chr5.2:76278129-76278148 | MS.gene016992:intron | 55.0% | |
| GCCTGCACAGCTTAAGGGAT+TGG | + | chr5.2:76276111-76276130 | MS.gene016992:CDS | 55.0% | |
| GTTCCTGCCAGGAAAACGAC+TGG | - | chr5.2:76279051-76279070 | None:intergenic | 55.0% | |
| TCAAATGCCCCAGGAGGAAG+TGG | - | chr5.2:76276835-76276854 | None:intergenic | 55.0% | |
| TCTAAGAGGACGTGGGTGTC+GGG | - | chr5.2:76279864-76279883 | None:intergenic | 55.0% | |
| TGGCATTCAAATGCCCCAGG+AGG | - | chr5.2:76276841-76276860 | None:intergenic | 55.0% | |
| ! | GGATTCCAAGCGTGGTGTTG+AGG | + | chr5.2:76279139-76279158 | MS.gene016992:CDS | 55.0% |
| !! | ATCTCGGTTTGCTATGGGCC+TGG | + | chr5.2:76277082-76277101 | MS.gene016992:intron | 55.0% |
| !! | ATGCCAGTCGTTTTCCTGGC+AGG | + | chr5.2:76279045-76279064 | MS.gene016992:CDS | 55.0% |
| !! | GATGCCGTCTAGCTTTAGCG+AGG | + | chr5.2:76280524-76280543 | MS.gene016992:CDS | 55.0% |
| !! | TAGGTTCTAGGCTGGACCTC+TGG | + | chr5.2:76277842-76277861 | MS.gene016992:intron | 55.0% |
| !! | TCGTTCAAGCGGTGTCATCC+AGG | + | chr5.2:76276375-76276394 | MS.gene016992:CDS | 55.0% |
| !! | TCTCGGTTTGCTATGGGCCT+GGG | + | chr5.2:76277083-76277102 | MS.gene016992:intron | 55.0% |
| ATCGCGATGCAGGTGGAGCA+GGG | + | chr5.2:76279575-76279594 | MS.gene016992:CDS | 60.0% | |
| ATGGCCGCAGTCGTACGCAA+GGG | + | chr5.2:76280305-76280324 | MS.gene016992:intron | 60.0% | |
| CAAGTCCACTGCCACGATCC+TGG | - | chr5.2:76276396-76276415 | None:intergenic | 60.0% | |
| CCCCACATCGAGTGGGCATA+TGG | - | chr5.2:76278134-76278153 | None:intergenic | 60.0% | |
| CTGCAGACTTCACGCTCCAG+AGG | - | chr5.2:76277861-76277880 | None:intergenic | 60.0% | |
| GTCATCCAGGATCGTGGCAG+TGG | + | chr5.2:76276388-76276407 | MS.gene016992:CDS | 60.0% | |
| GTCGTACGCAAGGGACACCT+TGG | + | chr5.2:76280314-76280333 | MS.gene016992:intron | 60.0% | |
| GTGTCCCTTGCGTACGACTG+CGG | - | chr5.2:76280312-76280331 | None:intergenic | 60.0% | |
| TATCGCGATGCAGGTGGAGC+AGG | + | chr5.2:76279574-76279593 | MS.gene016992:CDS | 60.0% | |
| TATGGCCGCAGTCGTACGCA+AGG | + | chr5.2:76280304-76280323 | MS.gene016992:intron | 60.0% | |
| ! | CAGGATCGTGGCAGTGGACT+TGG | + | chr5.2:76276394-76276413 | MS.gene016992:CDS | 60.0% |
| !! | AGCGGTGTCATCCAGGATCG+TGG | + | chr5.2:76276382-76276401 | MS.gene016992:CDS | 60.0% |
| !! | CTCGGTTTGCTATGGGCCTG+GGG | + | chr5.2:76277084-76277103 | MS.gene016992:intron | 60.0% |
| !! | GTTTGCTATGGGCCTGGGGT+AGG | + | chr5.2:76277088-76277107 | MS.gene016992:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 76275329 | 76280581 | 76275329 | ID=MS.gene016992 |
| chr5.2 | mRNA | 76275329 | 76280581 | 76275329 | ID=MS.gene016992.t1;Parent=MS.gene016992 |
| chr5.2 | exon | 76275329 | 76275335 | 76275329 | ID=MS.gene016992.t1.exon1;Parent=MS.gene016992.t1 |
| chr5.2 | CDS | 76275329 | 76275335 | 76275329 | ID=cds.MS.gene016992.t1;Parent=MS.gene016992.t1 |
| chr5.2 | exon | 76276041 | 76276148 | 76276041 | ID=MS.gene016992.t1.exon2;Parent=MS.gene016992.t1 |
| chr5.2 | CDS | 76276041 | 76276148 | 76276041 | ID=cds.MS.gene016992.t1;Parent=MS.gene016992.t1 |
| chr5.2 | exon | 76276227 | 76276880 | 76276227 | ID=MS.gene016992.t1.exon3;Parent=MS.gene016992.t1 |
| chr5.2 | CDS | 76276227 | 76276880 | 76276227 | ID=cds.MS.gene016992.t1;Parent=MS.gene016992.t1 |
| chr5.2 | exon | 76278409 | 76278488 | 76278409 | ID=MS.gene016992.t1.exon4;Parent=MS.gene016992.t1 |
| chr5.2 | CDS | 76278409 | 76278488 | 76278409 | ID=cds.MS.gene016992.t1;Parent=MS.gene016992.t1 |
| chr5.2 | exon | 76278897 | 76279439 | 76278897 | ID=MS.gene016992.t1.exon5;Parent=MS.gene016992.t1 |
| chr5.2 | CDS | 76278897 | 76279439 | 76278897 | ID=cds.MS.gene016992.t1;Parent=MS.gene016992.t1 |
| chr5.2 | exon | 76279535 | 76279618 | 76279535 | ID=MS.gene016992.t1.exon6;Parent=MS.gene016992.t1 |
| chr5.2 | CDS | 76279535 | 76279618 | 76279535 | ID=cds.MS.gene016992.t1;Parent=MS.gene016992.t1 |
| chr5.2 | exon | 76279740 | 76279828 | 76279740 | ID=MS.gene016992.t1.exon7;Parent=MS.gene016992.t1 |
| chr5.2 | CDS | 76279740 | 76279828 | 76279740 | ID=cds.MS.gene016992.t1;Parent=MS.gene016992.t1 |
| chr5.2 | exon | 76280512 | 76280581 | 76280512 | ID=MS.gene016992.t1.exon8;Parent=MS.gene016992.t1 |
| chr5.2 | CDS | 76280512 | 76280581 | 76280512 | ID=cds.MS.gene016992.t1;Parent=MS.gene016992.t1 |
| Gene Sequence |
| Protein sequence |
