AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene017066

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene017066.t1 MTR_5g090970 94.212 311 17 1 1 310 1 311 0.0 618
MS.gene017066.t1 MTR_5g090970 93.569 311 18 2 1 310 1 310 0.0 609
MS.gene017066.t1 MTR_2g068880 55.405 296 117 11 14 299 18 308 2.31e-96 287
MS.gene017066.t1 MTR_2g068920 52.759 290 114 7 14 299 17 287 5.87e-93 278
MS.gene017066.t1 MTR_5g040420 66.279 172 56 2 10 181 6 175 1.05e-77 242
MS.gene017066.t1 MTR_8g467490 64.072 167 59 1 12 178 8 173 2.75e-76 239
MS.gene017066.t1 MTR_6g011860 58.564 181 64 2 1 181 7 176 2.13e-71 226
MS.gene017066.t1 MTR_4g134460 53.939 165 63 3 14 178 50 201 6.55e-55 184
MS.gene017066.t1 MTR_2157s0010 49.686 159 80 0 20 178 10 168 5.15e-53 175
MS.gene017066.t1 MTR_2g080010 49.405 168 78 4 20 183 17 181 2.73e-52 176
MS.gene017066.t1 MTR_4g089135 48.000 175 72 3 20 178 17 188 5.78e-52 174
MS.gene017066.t1 MTR_3g088110 53.459 159 64 3 20 178 9 157 1.16e-51 172
MS.gene017066.t1 MTR_7g085220 49.091 165 73 2 20 178 10 169 1.38e-51 173
MS.gene017066.t1 MTR_8g094580 50.000 166 74 2 20 185 9 165 5.57e-51 170
MS.gene017066.t1 MTR_7g100990 48.864 176 83 5 9 183 1 170 3.63e-50 169
MS.gene017066.t1 MTR_5g041940 48.000 175 75 3 20 194 5 163 2.07e-49 165
MS.gene017066.t1 MTR_2g079990 49.704 169 73 2 20 188 18 174 2.76e-49 167
MS.gene017066.t1 MTR_2g093810 52.564 156 68 3 20 175 16 165 3.67e-49 166
MS.gene017066.t1 MTR_4g081870 50.314 159 71 2 20 178 11 161 2.02e-48 163
MS.gene017066.t1 MTR_3g096920 47.429 175 78 4 20 190 9 173 7.04e-48 162
MS.gene017066.t1 MTR_7g005280 53.012 166 62 5 12 176 8 158 2.85e-47 159
MS.gene017066.t1 MTR_8g059170 49.405 168 75 2 20 187 16 173 6.29e-47 160
MS.gene017066.t1 MTR_3g435150 37.453 267 152 4 12 277 9 261 1.04e-46 159
MS.gene017066.t1 MTR_4g108760 43.716 183 91 3 2 184 3 173 1.05e-46 161
MS.gene017066.t1 MTR_2g079990 45.745 188 80 4 20 188 18 202 1.92e-46 161
MS.gene017066.t1 MTR_4g036030 45.122 164 73 3 18 178 7 156 2.26e-46 160
MS.gene017066.t1 MTR_4g075980 46.746 169 76 3 15 183 12 166 3.50e-46 158
MS.gene017066.t1 MTR_2g078700 47.561 164 78 3 15 178 20 175 6.60e-46 159
MS.gene017066.t1 MTR_8g076110 36.491 285 148 10 15 294 3 259 8.51e-46 157
MS.gene017066.t1 MTR_5g012080 46.061 165 72 4 18 178 7 158 2.20e-45 157
MS.gene017066.t1 MTR_3g096920 57.480 127 50 1 20 146 9 131 3.67e-45 156
MS.gene017066.t1 MTR_4g101680 45.122 164 73 3 18 178 7 156 4.11e-45 157
MS.gene017066.t1 MTR_7g085260 47.368 171 80 3 11 178 8 171 4.95e-45 157
MS.gene017066.t1 MTR_5g021710 40.404 198 95 4 15 203 5 188 1.02e-44 155
MS.gene017066.t1 MTR_6g012670 46.369 179 85 4 1 178 2 170 2.40e-44 154
MS.gene017066.t1 MTR_3g064580 50.311 161 67 5 20 178 8 157 7.47e-44 159
MS.gene017066.t1 MTR_6g477900 45.963 161 73 3 20 178 8 156 9.39e-44 150
MS.gene017066.t1 MTR_3g109340 42.857 175 89 2 14 188 18 181 2.16e-43 152
MS.gene017066.t1 MTR_3g109340 42.857 175 88 2 14 188 18 180 3.90e-43 152
MS.gene017066.t1 MTR_1g008740 39.153 189 102 4 11 198 6 182 8.07e-43 150
MS.gene017066.t1 MTR_4g035590 43.902 164 74 3 18 178 8 156 8.12e-43 150
MS.gene017066.t1 MTR_1g008740 39.153 189 102 4 11 198 20 196 1.34e-42 150
MS.gene017066.t1 MTR_8g024480 43.293 164 87 2 18 178 15 175 1.60e-42 152
MS.gene017066.t1 MTR_6g032770 46.707 167 80 4 11 176 10 168 1.92e-42 150
MS.gene017066.t1 MTR_2g064090 45.963 161 74 3 20 178 8 157 2.44e-42 149
MS.gene017066.t1 MTR_2g062730 38.710 217 107 6 17 230 9 202 2.82e-42 149
MS.gene017066.t1 MTR_3g070030 44.937 158 78 2 21 178 22 170 5.07e-42 149
MS.gene017066.t1 MTR_1g096430 43.353 173 80 5 15 183 4 162 2.43e-41 146
MS.gene017066.t1 MTR_6g084430 41.765 170 85 3 15 184 2 157 2.64e-41 146
MS.gene017066.t1 MTR_5g076850 46.584 161 72 4 20 178 8 156 3.23e-41 151
MS.gene017066.t1 MTR_5g014300 43.636 165 75 3 20 178 8 160 9.51e-41 145
MS.gene017066.t1 MTR_3g098810 47.500 160 78 3 20 178 16 170 1.17e-40 142
MS.gene017066.t1 MTR_3g116070 48.905 137 68 2 11 146 16 151 1.28e-40 145
MS.gene017066.t1 MTR_1g090720 42.328 189 97 4 18 200 42 224 1.48e-40 147
MS.gene017066.t1 MTR_4g098630 49.630 135 66 1 14 146 2 136 1.94e-40 144
MS.gene017066.t1 MTR_8g099750 45.506 178 80 6 20 190 16 183 2.02e-40 141
MS.gene017066.t1 MTR_7g011120 42.405 158 88 1 21 178 11 165 1.16e-39 141
MS.gene017066.t1 MTR_7g011130 41.808 177 92 4 10 178 9 182 2.23e-39 142
MS.gene017066.t1 MTR_1g069805 42.073 164 71 3 20 178 12 156 3.68e-39 139
MS.gene017066.t1 MTR_2g064470 45.679 162 65 4 20 176 13 156 4.43e-39 140
MS.gene017066.t1 MTR_5g069030 47.239 163 71 4 19 178 25 175 3.63e-38 143
MS.gene017066.t1 MTR_3g096140 40.719 167 85 3 14 178 3 157 5.70e-38 136
MS.gene017066.t1 MTR_1g097300 50.769 130 59 2 19 146 20 146 1.27e-37 140
MS.gene017066.t1 MTR_3g093050 33.813 278 148 7 21 280 25 284 2.60e-37 140
MS.gene017066.t1 MTR_3g096140 40.120 167 86 3 14 178 3 157 2.73e-37 136
MS.gene017066.t1 MTR_3g093050 33.813 278 148 7 21 280 25 284 3.99e-37 140
MS.gene017066.t1 MTR_8g063550 42.331 163 80 4 18 178 6 156 5.80e-37 135
MS.gene017066.t1 MTR_8g063550 42.331 163 80 4 18 178 6 156 6.71e-37 137
MS.gene017066.t1 MTR_7g097090 41.975 162 70 3 20 176 12 154 1.01e-36 133
MS.gene017066.t1 MTR_8g063550 42.331 163 80 4 18 178 6 156 1.47e-36 136
MS.gene017066.t1 MTR_1g090723 43.827 162 75 5 20 178 10 158 1.61e-36 138
MS.gene017066.t1 MTR_1g090723 43.827 162 75 5 20 178 10 158 1.90e-36 137
MS.gene017066.t1 MTR_8g093580 41.104 163 82 4 18 178 6 156 3.09e-36 136
MS.gene017066.t1 MTR_1g090723 43.210 162 77 5 20 178 10 159 4.50e-36 137
MS.gene017066.t1 MTR_3g098810 48.227 141 70 2 20 159 16 154 3.88e-35 125
MS.gene017066.t1 MTR_0036s0150 42.683 164 74 5 20 178 7 155 9.71e-35 132
MS.gene017066.t1 MTR_3g093040 42.424 165 80 6 17 178 106 258 1.88e-34 127
MS.gene017066.t1 MTR_2g086880 45.312 128 66 2 18 144 18 142 7.75e-33 127
MS.gene017066.t1 MTR_2g086880 45.312 128 66 2 18 144 18 142 8.82e-33 127
MS.gene017066.t1 MTR_3g070040 42.038 157 80 4 22 178 12 157 1.15e-32 123
MS.gene017066.t1 MTR_8g023840 46.457 127 63 4 21 144 14 138 2.49e-29 115
MS.gene017066.t1 MTR_2g086690 29.720 286 147 10 20 293 6 249 4.21e-28 109
MS.gene017066.t1 MTR_4g052620 39.106 179 90 7 15 185 2 169 5.40e-28 109
MS.gene017066.t1 MTR_8g094580 46.552 116 53 2 70 185 5 111 3.62e-27 106
MS.gene017066.t1 MTR_3g096140 37.415 147 78 3 34 178 2 136 5.11e-27 108
MS.gene017066.t1 MTR_8g023900 30.545 275 152 11 21 283 196 443 7.55e-27 110
MS.gene017066.t1 MTR_8g023900 37.805 164 84 7 19 178 12 161 6.38e-25 104
MS.gene017066.t1 MTR_8g023860 46.457 127 63 4 21 144 15 139 1.16e-26 108
MS.gene017066.t1 MTR_7g105170 34.884 172 100 6 20 185 6 171 5.26e-25 101
MS.gene017066.t1 MTR_4g094302 31.447 159 97 3 20 178 13 159 1.24e-24 98.6
MS.gene017066.t1 MTR_4g094302 35.433 127 73 2 20 146 13 130 1.85e-23 94.7
MS.gene017066.t1 MTR_8g023930 41.538 130 70 5 19 144 24 151 5.10e-23 99.0
MS.gene017066.t1 MTR_7g070140 43.434 99 52 2 71 169 17 111 7.63e-21 87.0
MS.gene017066.t1 MTR_7g083330 28.502 207 120 6 14 217 13 194 8.34e-20 85.9
MS.gene017066.t1 MTR_8g093790 32.704 159 75 6 20 178 12 138 4.38e-19 83.6
MS.gene017066.t1 MTR_8g023880 32.719 217 106 9 21 220 10 203 1.82e-18 84.0
MS.gene017066.t1 MTR_7g083370 33.333 126 77 4 21 144 13 133 5.32e-17 76.6
MS.gene017066.t1 MTR_7g083360 34.091 132 79 5 16 144 7 133 2.27e-16 75.5
MS.gene017066.t1 MTR_3g096400 27.500 160 106 4 20 177 9 160 1.17e-14 72.0
MS.gene017066.t1 MTR_1g087190 63.043 46 16 1 20 64 7 52 1.70e-13 64.7
MS.gene017066.t1 MTR_7g070150 42.188 64 25 2 113 176 4 55 3.07e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene017066.t1 AT2G43000 51.890 291 115 6 10 300 10 275 1.97e-95 283
MS.gene017066.t1 AT3G12910 49.508 305 124 11 10 301 13 300 1.26e-81 249
MS.gene017066.t1 AT5G39820 60.894 179 57 2 12 178 14 191 1.69e-74 232
MS.gene017066.t1 AT1G26870 63.372 172 62 1 7 178 5 175 1.69e-72 229
MS.gene017066.t1 AT2G02450 49.485 194 83 5 17 210 50 228 1.53e-57 191
MS.gene017066.t1 AT2G02450 49.485 194 83 5 17 210 50 228 1.67e-57 190
MS.gene017066.t1 AT5G63790 46.667 195 95 4 12 205 43 229 4.72e-53 176
MS.gene017066.t1 AT5G63790 46.667 195 95 4 12 205 53 239 6.70e-53 176
MS.gene017066.t1 AT3G04070 52.174 161 73 2 20 178 12 170 1.49e-52 176
MS.gene017066.t1 AT5G08790 45.146 206 99 5 16 215 4 201 2.12e-52 174
MS.gene017066.t1 AT1G61110 48.913 184 87 5 20 198 18 199 6.29e-52 174
MS.gene017066.t1 AT2G43000 45.045 222 97 6 79 300 1 197 9.39e-52 169
MS.gene017066.t1 AT3G04070 49.714 175 72 4 20 178 12 186 2.69e-51 173
MS.gene017066.t1 AT1G69490 50.314 159 71 2 20 178 11 161 6.93e-51 169
MS.gene017066.t1 AT3G15510 48.428 159 79 2 22 178 21 178 1.12e-49 169
MS.gene017066.t1 AT1G01720 50.943 159 69 2 20 178 9 158 4.19e-49 165
MS.gene017066.t1 AT2G24430 33.677 291 171 5 7 295 5 275 4.77e-49 166
MS.gene017066.t1 AT2G24430 33.677 291 171 5 7 295 5 275 4.77e-49 166
MS.gene017066.t1 AT1G77450 38.866 247 136 5 20 266 12 243 1.32e-48 163
MS.gene017066.t1 AT4G27410 50.311 161 64 3 20 178 16 162 5.43e-48 162
MS.gene017066.t1 AT1G52890 49.697 165 71 2 20 184 16 168 9.38e-48 162
MS.gene017066.t1 AT3G15500 49.112 169 74 2 20 188 16 172 1.72e-47 162
MS.gene017066.t1 AT1G12260 46.784 171 73 4 18 184 7 163 2.50e-47 162
MS.gene017066.t1 AT1G12260 46.784 171 73 4 18 184 7 163 3.34e-47 163
MS.gene017066.t1 AT5G61430 45.198 177 87 2 8 184 6 172 4.22e-47 161
MS.gene017066.t1 AT2G17040 54.545 132 60 0 16 147 4 135 1.31e-46 158
MS.gene017066.t1 AT5G07680 45.714 175 83 3 10 184 11 173 6.26e-46 158
MS.gene017066.t1 AT4G10350 38.496 226 114 6 18 238 9 214 1.65e-45 157
MS.gene017066.t1 AT5G07680 46.667 165 78 2 20 184 5 159 2.03e-45 156
MS.gene017066.t1 AT1G62700 47.561 164 69 4 18 178 7 156 3.56e-45 158
MS.gene017066.t1 AT1G62700 47.561 164 69 4 18 178 7 156 3.56e-45 158
MS.gene017066.t1 AT1G71930 38.258 264 133 11 20 276 11 251 4.99e-45 155
MS.gene017066.t1 AT1G71930 38.258 264 133 11 20 276 11 251 4.99e-45 155
MS.gene017066.t1 AT5G66300 43.575 179 80 5 18 188 12 177 5.26e-45 155
MS.gene017066.t1 AT4G36160 45.181 166 74 3 18 180 10 161 5.74e-45 157
MS.gene017066.t1 AT4G36160 45.181 166 74 3 18 180 10 161 5.74e-45 157
MS.gene017066.t1 AT4G36160 45.181 166 74 3 18 180 14 165 6.20e-45 157
MS.gene017066.t1 AT5G39610 47.170 159 74 2 20 178 22 170 1.39e-44 154
MS.gene017066.t1 AT1G52880 48.734 158 79 2 22 178 21 177 1.40e-44 154
MS.gene017066.t1 AT5G18270 49.686 159 71 3 20 178 23 172 2.86e-44 154
MS.gene017066.t1 AT4G27410 46.023 176 66 3 20 178 16 179 5.11e-44 153
MS.gene017066.t1 AT5G13180 50.955 157 63 3 20 176 16 158 5.14e-44 151
MS.gene017066.t1 AT5G62380 44.512 164 74 3 18 178 7 156 5.26e-44 154
MS.gene017066.t1 AT5G62380 44.512 164 74 3 18 178 7 156 5.26e-44 154
MS.gene017066.t1 AT3G18400 44.706 170 81 3 15 184 2 158 5.62e-44 153
MS.gene017066.t1 AT5G18270 49.057 159 72 3 20 178 23 172 1.05e-43 152
MS.gene017066.t1 AT2G18060 43.902 164 75 3 18 178 9 158 1.18e-43 153
MS.gene017066.t1 AT2G18060 43.902 164 75 3 18 178 9 158 1.18e-43 153
MS.gene017066.t1 AT3G04060 49.693 163 72 4 20 181 22 175 3.15e-43 151
MS.gene017066.t1 AT3G29035 53.846 130 57 1 20 149 26 152 8.66e-43 150
MS.gene017066.t1 AT4G17980 53.488 129 57 2 20 146 8 135 9.99e-43 148
MS.gene017066.t1 AT4G17980 53.488 129 57 2 20 146 8 135 1.01e-42 149
MS.gene017066.t1 AT5G53950 44.444 171 87 3 8 178 7 169 1.52e-42 150
MS.gene017066.t1 AT1G33280 45.122 164 72 4 18 178 8 156 2.24e-42 148
MS.gene017066.t1 AT3G12977 45.283 159 76 3 20 178 20 167 2.82e-42 147
MS.gene017066.t1 AT1G65910 48.447 161 69 4 20 178 8 156 4.40e-42 154
MS.gene017066.t1 AT3G10480 42.541 181 87 4 18 192 27 196 4.74e-42 151
MS.gene017066.t1 AT3G17730 45.963 161 73 5 20 178 8 156 5.80e-42 145
MS.gene017066.t1 AT3G10480 42.541 181 86 4 18 192 27 195 6.04e-42 150
MS.gene017066.t1 AT3G15170 44.068 177 89 5 1 175 1 169 6.97e-42 147
MS.gene017066.t1 AT1G76420 41.667 168 87 2 11 178 15 171 7.12e-42 148
MS.gene017066.t1 AT3G03200 48.765 162 70 5 20 179 8 158 1.30e-41 150
MS.gene017066.t1 AT5G17260 47.531 162 72 5 20 179 8 158 2.33e-41 149
MS.gene017066.t1 AT1G79580 42.690 171 81 4 18 185 17 173 2.56e-41 147
MS.gene017066.t1 AT1G79580 42.690 171 81 4 18 185 17 173 2.56e-41 147
MS.gene017066.t1 AT1G79580 42.690 171 81 4 18 185 17 173 2.56e-41 147
MS.gene017066.t1 AT1G79580 42.690 171 81 4 18 185 17 173 2.56e-41 147
MS.gene017066.t1 AT1G79580 42.690 171 81 4 18 185 17 173 2.56e-41 147
MS.gene017066.t1 AT2G33480 48.408 157 64 3 20 176 17 156 1.05e-40 143
MS.gene017066.t1 AT3G10490 42.541 181 87 5 18 192 27 196 1.12e-40 142
MS.gene017066.t1 AT1G32510 45.455 165 76 4 20 178 8 164 2.66e-40 142
MS.gene017066.t1 AT1G32770 37.445 227 106 7 18 233 16 217 2.83e-40 144
MS.gene017066.t1 AT5G46590 51.163 129 59 2 20 146 8 134 3.07e-40 142
MS.gene017066.t1 AT1G54330 45.963 161 70 3 20 178 8 153 3.13e-40 142
MS.gene017066.t1 AT2G33480 48.408 157 66 4 20 176 17 158 5.63e-40 141
MS.gene017066.t1 AT5G46590 51.163 129 59 2 20 146 8 134 5.82e-40 142
MS.gene017066.t1 AT2G46770 41.420 169 87 4 18 178 16 180 1.23e-39 142
MS.gene017066.t1 AT1G33060 38.117 223 120 6 16 236 22 228 2.57e-39 146
MS.gene017066.t1 AT1G33060 38.117 223 120 6 16 236 22 228 2.71e-39 146
MS.gene017066.t1 AT3G10490 43.094 181 86 6 18 192 27 196 3.26e-39 143
MS.gene017066.t1 AT5G04410 44.785 163 76 4 18 178 9 159 6.75e-39 144
MS.gene017066.t1 AT3G10500 43.373 166 80 4 18 181 9 162 1.01e-38 144
MS.gene017066.t1 AT1G56010 45.625 160 77 5 20 178 21 171 1.34e-38 139
MS.gene017066.t1 AT5G09330 42.331 163 80 4 18 178 6 156 2.25e-38 142
MS.gene017066.t1 AT5G09330 42.331 163 80 4 18 178 6 156 2.25e-38 142
MS.gene017066.t1 AT5G09330 42.331 163 80 4 18 178 6 156 2.25e-38 142
MS.gene017066.t1 AT5G09330 42.331 163 80 4 18 178 6 156 2.25e-38 142
MS.gene017066.t1 AT5G09330 42.331 163 80 4 18 178 6 156 2.25e-38 142
MS.gene017066.t1 AT4G35580 44.503 191 84 8 19 205 9 181 5.98e-38 141
MS.gene017066.t1 AT1G34190 49.612 129 60 2 20 146 18 143 6.30e-38 141
MS.gene017066.t1 AT4G35580 44.503 191 84 8 19 205 9 181 6.90e-38 141
MS.gene017066.t1 AT3G61910 40.588 170 87 4 18 178 11 175 7.72e-38 137
MS.gene017066.t1 AT4G35580 44.503 191 84 8 19 205 9 181 7.86e-38 141
MS.gene017066.t1 AT1G34180 47.794 136 66 2 13 146 11 143 2.58e-37 138
MS.gene017066.t1 AT3G10480 36.449 214 86 5 18 192 27 229 9.18e-37 138
MS.gene017066.t1 AT1G34180 47.794 136 66 2 13 146 11 143 1.09e-36 138
MS.gene017066.t1 AT5G22290 32.787 244 140 6 14 252 17 241 1.26e-35 131
MS.gene017066.t1 AT2G27300 44.186 129 68 2 17 144 13 138 2.08e-35 130
MS.gene017066.t1 AT5G24590 37.500 240 106 8 13 237 2 212 7.37e-35 132
MS.gene017066.t1 AT3G44290 45.669 127 65 2 19 144 15 138 1.15e-34 126
MS.gene017066.t1 AT1G34180 44.681 141 61 2 20 146 18 155 1.93e-34 130
MS.gene017066.t1 AT3G44290 45.669 127 65 2 19 144 15 138 4.54e-34 127
MS.gene017066.t1 AT1G34180 43.243 148 67 2 13 146 11 155 4.99e-34 131
MS.gene017066.t1 AT5G64060 41.718 163 81 4 18 178 6 156 6.36e-34 127
MS.gene017066.t1 AT3G49530 41.104 163 82 4 19 178 13 164 7.14e-34 128
MS.gene017066.t1 AT4G28530 40.000 180 68 5 20 178 12 172 1.06e-33 127
MS.gene017066.t1 AT3G49530 41.104 163 82 4 19 178 13 164 2.51e-33 127
MS.gene017066.t1 AT5G04395 40.000 140 71 1 20 146 30 169 3.06e-29 110
MS.gene017066.t1 AT1G32870 46.429 140 68 3 9 146 1 135 9.73e-29 115
MS.gene017066.t1 AT1G32870 46.429 140 68 3 9 146 1 135 1.08e-28 115
MS.gene017066.t1 AT1G32870 46.429 140 68 3 9 146 37 171 1.49e-28 115
MS.gene017066.t1 AT5G61430 45.690 116 53 2 69 184 4 109 2.05e-27 108
MS.gene017066.t1 AT5G64530 39.844 128 64 3 20 147 5 119 2.92e-27 104
MS.gene017066.t1 AT5G64530 39.844 128 64 3 20 147 5 119 5.81e-27 104
MS.gene017066.t1 AT5G22380 35.593 177 98 6 15 185 3 169 4.86e-26 103
MS.gene017066.t1 AT3G12977 44.828 116 53 3 63 178 10 114 6.61e-26 103
MS.gene017066.t1 AT4G10350 35.227 176 92 5 65 238 12 167 1.48e-24 100
MS.gene017066.t1 AT4G01550 41.985 131 73 2 19 146 5 135 3.93e-24 102
MS.gene017066.t1 AT3G44350 33.721 172 95 5 21 185 8 167 3.44e-23 96.3
MS.gene017066.t1 AT1G56010 44.643 112 53 4 67 178 2 104 1.16e-22 95.1
MS.gene017066.t1 AT4G01520 39.231 130 75 3 21 146 7 136 3.41e-22 94.7
MS.gene017066.t1 AT4G01540 40.152 132 75 3 19 146 5 136 6.94e-22 95.1
MS.gene017066.t1 AT4G01540 40.152 132 75 3 19 146 5 136 1.09e-21 95.1
MS.gene017066.t1 AT4G01540 40.152 132 75 3 19 146 5 136 1.12e-21 94.7
MS.gene017066.t1 AT4G01540 40.152 132 75 3 19 146 5 136 1.21e-21 95.1
MS.gene017066.t1 AT3G44350 36.486 148 82 5 21 160 8 151 1.24e-21 89.7
MS.gene017066.t1 AT1G02230 39.844 128 70 4 21 144 6 130 8.42e-21 91.7
MS.gene017066.t1 AT1G02250 42.188 128 67 4 21 144 6 130 1.32e-20 91.3
MS.gene017066.t1 AT4G28530 43.810 105 43 2 20 108 12 116 1.64e-19 87.4
MS.gene017066.t1 AT2G33480 43.396 106 48 3 71 176 8 101 1.65e-19 85.5
MS.gene017066.t1 AT1G01010 38.255 149 79 5 14 152 2 147 1.42e-18 85.9
MS.gene017066.t1 AT3G04420 38.760 129 70 4 21 144 6 130 2.13e-17 81.3
MS.gene017066.t1 AT3G04420 38.760 129 70 4 21 144 6 130 6.65e-17 80.5
MS.gene017066.t1 AT1G02220 33.125 160 83 6 21 176 6 145 2.79e-14 73.2
MS.gene017066.t1 AT5G14000 32.812 128 79 3 21 146 18 140 3.94e-14 69.3
MS.gene017066.t1 AT2G18060 40.964 83 35 2 96 178 2 70 4.85e-14 71.6
MS.gene017066.t1 AT5G50820 36.552 145 73 7 20 157 19 151 6.05e-14 69.7
MS.gene017066.t1 AT5G14000 33.588 131 79 4 19 146 15 140 1.70e-13 68.6
MS.gene017066.t1 AT3G10490 39.604 101 46 5 91 187 2 91 1.48e-12 67.8
MS.gene017066.t1 AT3G10490 39.604 101 46 5 91 187 2 91 1.48e-12 67.8
MS.gene017066.t1 AT3G04430 32.331 133 77 3 24 145 6 136 7.92e-11 60.8

Find 52 sgRNAs with CRISPR-Local

Find 182 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGTGACAGGATCTGGATTT+TGG 0.226878 5.1:+72454561 MS.gene017066:CDS
CGATTCTATGCTGCATGTTT+TGG 0.248190 5.1:-72456737 None:intergenic
GAAATGAGTGGTTAAATCTT+TGG 0.258441 5.1:-72456855 None:intergenic
TTACAATCATAAACCTTTGA+TGG 0.272440 5.1:-72457021 None:intergenic
GAAGATGAAGTTGTGCTTCC+TGG 0.272458 5.1:+72453318 MS.gene017066:CDS
GAAACCAAACCATTCATTAA+TGG 0.288779 5.1:+72456823 MS.gene017066:CDS
CACTCATTTCTAAATCAATT+AGG 0.323141 5.1:+72456868 MS.gene017066:CDS
ATGCATCATCCAATCAGTTT+TGG 0.326620 5.1:-72454690 None:intergenic
CCAGATCCTGTCACTCTATT+AGG 0.347513 5.1:-72454554 None:intergenic
CATTGGACTCAAGAAATCAT+TGG 0.361070 5.1:+72454637 MS.gene017066:CDS
GATTCTTTAACACAATATAT+AGG 0.374225 5.1:-72454605 None:intergenic
CCTAATAGAGTGACAGGATC+TGG 0.379091 5.1:+72454554 MS.gene017066:CDS
ATGCATTTGCAAATGACAAT+TGG 0.379969 5.1:+72456962 MS.gene017066:CDS
ATGTCCATTAATGAATGGTT+TGG 0.424757 5.1:-72456827 None:intergenic
GTTTAAGAGGAAGAAAATAC+AGG 0.449796 5.1:+72454519 MS.gene017066:CDS
GTTTACTACCGTGGAAGTGC+AGG 0.450626 5.1:+72454659 MS.gene017066:CDS
TCAACATGTCCATTAATGAA+TGG 0.454980 5.1:-72456832 None:intergenic
AAGTGGAGAAGAAGCCTCTT+CGG 0.466564 5.1:+72453394 MS.gene017066:CDS
GAAAATACAGGAACAGCATA+AGG 0.468401 5.1:+72454531 MS.gene017066:CDS
CGACAAGCTCTTCATCTGTT+GGG 0.469693 5.1:-72453353 None:intergenic
AAGATGAAGTTGTGCTTCCT+GGG 0.478780 5.1:+72453319 MS.gene017066:CDS
CCGACAAGCTCTTCATCTGT+TGG 0.485517 5.1:-72453354 None:intergenic
TGCATTTGCAAATGACAATT+GGG 0.486789 5.1:+72456963 MS.gene017066:CDS
GGAAAGGCACCAAAACTGAT+TGG 0.496667 5.1:+72454681 MS.gene017066:CDS
GAATTTCGTCTCCCACCTAA+AGG 0.503701 5.1:+72454713 MS.gene017066:CDS
ACATATACAAATATGATCCA+TGG 0.505053 5.1:+72453439 MS.gene017066:CDS
ATAAGGCCTAATAGAGTGAC+AGG 0.505529 5.1:+72454548 MS.gene017066:CDS
CAAAACATGCAGCATAGAAT+CGG 0.508093 5.1:+72456738 MS.gene017066:CDS
CCAACAGATGAAGAGCTTGT+CGG 0.519704 5.1:+72453354 MS.gene017066:CDS
TGCCTTTCCCTGCACTTCCA+CGG 0.525991 5.1:-72454667 None:intergenic
TATGAAGAAGCTAGTACTGT+GGG 0.526184 5.1:+72454473 MS.gene017066:intron
TTGGAATGATCAAAATGTTG+TGG 0.532956 5.1:+72456936 MS.gene017066:CDS
ATCTTACTTGGTAAATCCCA+TGG 0.534175 5.1:-72453456 None:intergenic
AAAGAATCACATGAATGCAT+TGG 0.548150 5.1:+72454620 MS.gene017066:CDS
GAGTGAGACAAGGTGGTAGT+TGG 0.549628 5.1:-72456907 None:intergenic
ATAAACCTTTGATGGATCAA+AGG 0.554674 5.1:-72457013 None:intergenic
CATATACAAATATGATCCAT+GGG 0.566140 5.1:+72453440 MS.gene017066:CDS
GTTTACCTTTGATCCATCAA+AGG 0.568973 5.1:+72457008 MS.gene017066:CDS
CTAATTGATTTAGAAATGAG+TGG 0.579913 5.1:-72456867 None:intergenic
TTGATGAGTTCAATCCGAAG+AGG 0.599169 5.1:-72453408 None:intergenic
AAATCATTGGTTTACTACCG+TGG 0.602151 5.1:+72454650 MS.gene017066:CDS
TCATTGCTATGATTAAGAAG+TGG 0.602276 5.1:-72454752 None:intergenic
TACCGTGGAAGTGCAGGGAA+AGG 0.602637 5.1:+72454665 MS.gene017066:CDS
ATATGAAGAAGCTAGTACTG+TGG 0.602894 5.1:+72454472 MS.gene017066:intron
CAAGCTCTTCATCTGTTGGG+TGG 0.605521 5.1:-72453350 None:intergenic
TTTACTACCGTGGAAGTGCA+GGG 0.609761 5.1:+72454660 MS.gene017066:CDS
TTTGTGAAAGTCAAGTATTG+TGG 0.625769 5.1:-72456772 None:intergenic
AATTTGCATTGCAGGAAGTG+TGG 0.627428 5.1:+72456611 MS.gene017066:intron
TGAAGAAGCTAGTACTGTGG+GGG 0.635072 5.1:+72454475 MS.gene017066:intron
ATGAAGAAGCTAGTACTGTG+GGG 0.683721 5.1:+72454474 MS.gene017066:intron
GTTGGGTGGAATCTAAACCC+AGG 0.685010 5.1:-72453336 None:intergenic
AAAACTTGAGTGAGACAAGG+TGG 0.702923 5.1:-72456914 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAGATGTATATTAAATA+GGG - chr5.1:72455978-72455997 None:intergenic 10.0%
!! AACAAAAAAATTATGTAAAA+AGG + chr5.1:72453759-72453778 MS.gene017066:intron 10.0%
!! ATGTTTAAAAGAATATATAT+TGG + chr5.1:72454978-72454997 MS.gene017066:intron 10.0%
!! TTATAATTAAAATAATGACT+TGG + chr5.1:72456433-72456452 MS.gene017066:intron 10.0%
!! AAAAGATGTATATTAAATAG+GGG - chr5.1:72455977-72455996 None:intergenic 15.0%
!! AAAGAAATAATTAATGTAGT+TGG - chr5.1:72455945-72455964 None:intergenic 15.0%
!! GAAAAAGATGTATATTAAAT+AGG - chr5.1:72455979-72455998 None:intergenic 15.0%
!! TAATCTTGCAAAATATATAT+TGG + chr5.1:72455358-72455377 MS.gene017066:intron 15.0%
!!! AAAAAAAACTCATGTATTTT+TGG - chr5.1:72455082-72455101 None:intergenic 15.0%
!!! ATATATTCTTTTAAACATAC+CGG - chr5.1:72454976-72454995 None:intergenic 15.0%
!!! ATTTTTATCAAAACTTTCAT+TGG + chr5.1:72454811-72454830 MS.gene017066:intron 15.0%
!!! GTAAATTAATTGTTTTGAAT+TGG - chr5.1:72455254-72455273 None:intergenic 15.0%
!!! GTTTATTGTATAAATTGTTT+TGG + chr5.1:72455121-72455140 MS.gene017066:intron 15.0%
!!! TTTTTACTTATAATAGTAAC+CGG + chr5.1:72456299-72456318 MS.gene017066:intron 15.0%
!! AACAAACTTATGAAAATATC+TGG + chr5.1:72455187-72455206 MS.gene017066:intron 20.0%
!! AATATCAAATATACATCATC+TGG + chr5.1:72456168-72456187 MS.gene017066:intron 20.0%
!! ACCATATATTACAATCAAAA+TGG - chr5.1:72454396-72454415 None:intergenic 20.0%
!! ATTGAATAAGTGATATATGT+CGG - chr5.1:72456263-72456282 None:intergenic 20.0%
!! CATATATTACAATCAAAATG+GGG - chr5.1:72454394-72454413 None:intergenic 20.0%
!! CATTAACATATAATTATGAG+AGG - chr5.1:72453490-72453509 None:intergenic 20.0%
!! CCATATATTACAATCAAAAT+GGG - chr5.1:72454395-72454414 None:intergenic 20.0%
!! GAAGATAATAACATCTTAAA+TGG + chr5.1:72455000-72455019 MS.gene017066:intron 20.0%
!! GACAAAAAAAAATCTCAAAA+GGG - chr5.1:72455895-72455914 None:intergenic 20.0%
!! GATTCTTTAACACAATATAT+AGG - chr5.1:72454608-72454627 None:intergenic 20.0%
!! TAATGTGAATAAGTAAAAGT+TGG - chr5.1:72456363-72456382 None:intergenic 20.0%
!! TATATGCATGTTTACATTAT+AGG + chr5.1:72454334-72454353 MS.gene017066:intron 20.0%
!! TGTTCTTGAATTTACATATA+TGG + chr5.1:72454438-72454457 MS.gene017066:intron 20.0%
!! TTAGTCAATTAAAAGTCATT+TGG - chr5.1:72455341-72455360 None:intergenic 20.0%
!! TTTATAAATTATACAACCTC+CGG - chr5.1:72456321-72456340 None:intergenic 20.0%
!!! ACACTTTTTTTGTTTTTTTG+AGG + chr5.1:72455386-72455405 MS.gene017066:intron 20.0%
!!! ACTTTTTTTGTTTTTTTGAG+GGG + chr5.1:72455388-72455407 MS.gene017066:intron 20.0%
!!! CACTTTTTTTGTTTTTTTGA+GGG + chr5.1:72455387-72455406 MS.gene017066:intron 20.0%
!!! CTTTTTCTTATAATAAAGAC+CGG + chr5.1:72455772-72455791 MS.gene017066:intron 20.0%
!!! GGTTTTGCATTTATAATTAA+GGG + chr5.1:72454832-72454851 MS.gene017066:intron 20.0%
!!! GTTTTGCATTTATAATTAAG+GGG + chr5.1:72454833-72454852 MS.gene017066:intron 20.0%
!!! TAAGAAACAATTGACTTTTT+TGG + chr5.1:72455673-72455692 MS.gene017066:intron 20.0%
!!! TGGTTTTGCATTTATAATTA+AGG + chr5.1:72454831-72454850 MS.gene017066:intron 20.0%
!!! TGTTTTGAATTGGTTTTTTT+AGG - chr5.1:72455244-72455263 None:intergenic 20.0%
!!! TTGTTTCTTATAATAAAGAC+CGG - chr5.1:72455663-72455682 None:intergenic 20.0%
!!! TTTGTTTTTAACATACTGTA+TGG + chr5.1:72456588-72456607 MS.gene017066:intron 20.0%
! AAACTTATGAAAATATCTGG+CGG + chr5.1:72455190-72455209 MS.gene017066:intron 25.0%
! AATAAGAAGTGAGAAAAACA+AGG - chr5.1:72453882-72453901 None:intergenic 25.0%
! ACATATACAAATATGATCCA+TGG + chr5.1:72453439-72453458 MS.gene017066:CDS 25.0%
! CACTCATTTCTAAATCAATT+AGG + chr5.1:72456868-72456887 MS.gene017066:CDS 25.0%
! CATATACAAATATGATCCAT+GGG + chr5.1:72453440-72453459 MS.gene017066:CDS 25.0%
! GGACAAAAAAAAATCTCAAA+AGG - chr5.1:72455896-72455915 None:intergenic 25.0%
! TTAAGAAAGTTGTCATCAAA+TGG - chr5.1:72453856-72453875 None:intergenic 25.0%
! TTACAATCATAAACCTTTGA+TGG - chr5.1:72457024-72457043 None:intergenic 25.0%
! TTCTTATTGGTCAAAAACAA+TGG + chr5.1:72453894-72453913 MS.gene017066:intron 25.0%
!! AACAAAAACACACTTTTCAA+AGG - chr5.1:72456574-72456593 None:intergenic 25.0%
!! ACTTTTATATGTGGATATCT+TGG + chr5.1:72455052-72455071 MS.gene017066:intron 25.0%
!! CTAATTGATTTAGAAATGAG+TGG - chr5.1:72456870-72456889 None:intergenic 25.0%
!! TAATCTCTGACTTTTATATG+TGG + chr5.1:72455043-72455062 MS.gene017066:intron 25.0%
!! TCAAAAGGGTCTTATAATTA+GGG - chr5.1:72455881-72455900 None:intergenic 25.0%
!! TCAGATTGTTGTTCAATAAT+AGG + chr5.1:72454223-72454242 MS.gene017066:intron 25.0%
!!! ATTCCCGTTATTTTTTCAAA+AGG + chr5.1:72456115-72456134 MS.gene017066:intron 25.0%
!!! CCCATTTTGATTGTAATATA+TGG + chr5.1:72454392-72454411 MS.gene017066:intron 25.0%
!!! TAAGTAAAAGTTGGTTTTGT+AGG - chr5.1:72456354-72456373 None:intergenic 25.0%
!!! TCTAAGTCTTTTTTCACATT+TGG - chr5.1:72456685-72456704 None:intergenic 25.0%
!!! TGCTATTTCTTTTGTTTAAG+AGG + chr5.1:72454506-72454525 MS.gene017066:CDS 25.0%
!!! TTATTGCTAGTTTTTCCTTT+AGG - chr5.1:72454731-72454750 None:intergenic 25.0%
!!! TTCCCGTTATTTTTTCAAAA+GGG + chr5.1:72456116-72456135 MS.gene017066:intron 25.0%
!!! TTGTTTTTCTCACTTCTTAT+TGG + chr5.1:72453881-72453900 MS.gene017066:intron 25.0%
AAAACAATGGAGAGAGAAAA+AGG + chr5.1:72453907-72453926 MS.gene017066:intron 30.0%
AAAGAATCACATGAATGCAT+TGG + chr5.1:72454620-72454639 MS.gene017066:CDS 30.0%
AACATTAATGCTGAGATTTG+GGG + chr5.1:72455572-72455591 MS.gene017066:intron 30.0%
AATGTAGTTGGAAATAGCAA+AGG - chr5.1:72455933-72455952 None:intergenic 30.0%
ACAACATTAATGCTGAGATT+TGG + chr5.1:72455570-72455589 MS.gene017066:intron 30.0%
AGACTCATCATAATTGTACT+CGG + chr5.1:72453706-72453725 MS.gene017066:intron 30.0%
ATGCATTTGCAAATGACAAT+TGG + chr5.1:72456962-72456981 MS.gene017066:CDS 30.0%
ATGTAGTTGGAAATAGCAAA+GGG - chr5.1:72455932-72455951 None:intergenic 30.0%
ATGTCCATTAATGAATGGTT+TGG - chr5.1:72456830-72456849 None:intergenic 30.0%
ATTAAACTTTGTACTTCCTC+CGG + chr5.1:72455641-72455660 MS.gene017066:intron 30.0%
CAACATTAATGCTGAGATTT+GGG + chr5.1:72455571-72455590 MS.gene017066:intron 30.0%
CATGTACATAGACAAAAGTA+AGG + chr5.1:72456491-72456510 MS.gene017066:intron 30.0%
CATGTTTACATTATAGGCTA+TGG + chr5.1:72454340-72454359 MS.gene017066:intron 30.0%
CTTTACATACGATTCTAGAT+GGG - chr5.1:72455512-72455531 None:intergenic 30.0%
GAAACCAAACCATTCATTAA+TGG + chr5.1:72456823-72456842 MS.gene017066:CDS 30.0%
GAAATGAGTGGTTAAATCTT+TGG - chr5.1:72456858-72456877 None:intergenic 30.0%
GAGGAGAATAAAATCTTACT+TGG - chr5.1:72453471-72453490 None:intergenic 30.0%
GTTTAAGAGGAAGAAAATAC+AGG + chr5.1:72454519-72454538 MS.gene017066:CDS 30.0%
TCAACATGTCCATTAATGAA+TGG - chr5.1:72456835-72456854 None:intergenic 30.0%
TCATTGCTATGATTAAGAAG+TGG - chr5.1:72454755-72454774 None:intergenic 30.0%
TCTTTACATACGATTCTAGA+TGG - chr5.1:72455513-72455532 None:intergenic 30.0%
TGCATTTGCAAATGACAATT+GGG + chr5.1:72456963-72456982 MS.gene017066:CDS 30.0%
TGGACGTATCAAAATCTATT+AGG + chr5.1:72456453-72456472 MS.gene017066:intron 30.0%
TTACTTATAATAGTAACCGG+AGG + chr5.1:72456302-72456321 MS.gene017066:intron 30.0%
TTCTTATAATAAAGACCGGA+GGG + chr5.1:72455776-72455795 MS.gene017066:intron 30.0%
TTGGAATGATCAAAATGTTG+TGG + chr5.1:72456936-72456955 MS.gene017066:CDS 30.0%
TTTCTTATAATAAAGACCGG+AGG + chr5.1:72455775-72455794 MS.gene017066:intron 30.0%
TTTCTTATAATAAAGACCGG+AGG - chr5.1:72455794-72455775 None:intergenic 30.0%
! AATAACGGGAATTAAGATAG+TGG - chr5.1:72456107-72456126 None:intergenic 30.0%
! ATAAACCTTTGATGGATCAA+AGG - chr5.1:72457016-72457035 None:intergenic 30.0%
! CTCAAAAGGGTCTTATAATT+AGG - chr5.1:72455882-72455901 None:intergenic 30.0%
! GTGTGTATTTTCTGTATGAT+GGG - chr5.1:72456663-72456682 None:intergenic 30.0%
! TTTGTGAAAGTCAAGTATTG+TGG - chr5.1:72456775-72456794 None:intergenic 30.0%
!! AACTCGTTCATTTTCAAGAT+AGG + chr5.1:72455600-72455619 MS.gene017066:intron 30.0%
!!! AACCACTTTTTGACAACTTT+TGG - chr5.1:72453979-72453998 None:intergenic 30.0%
!!! TTTTGTTTTTTTGAGGGGAT+TGG + chr5.1:72455393-72455412 MS.gene017066:intron 30.0%
AAACCAACTCTCTCTCTTAA+AGG + chr5.1:72456032-72456051 MS.gene017066:intron 35.0%
AACCAATGAACACATGCTTA+AGG - chr5.1:72454943-72454962 None:intergenic 35.0%
ACCAATGAACACATGCTTAA+GGG - chr5.1:72454942-72454961 None:intergenic 35.0%
ATATGAAGAAGCTAGTACTG+TGG + chr5.1:72454472-72454491 MS.gene017066:intron 35.0%
ATCTTACTTGGTAAATCCCA+TGG - chr5.1:72453459-72453478 None:intergenic 35.0%
CAAAACATGCAGCATAGAAT+CGG + chr5.1:72456738-72456757 MS.gene017066:CDS 35.0%
CATCATAATTGTACTCGGTT+CGG + chr5.1:72453711-72453730 MS.gene017066:intron 35.0%
CATTGGACTCAAGAAATCAT+TGG + chr5.1:72454637-72454656 MS.gene017066:CDS 35.0%
GAAAATACAGGAACAGCATA+AGG + chr5.1:72454531-72454550 MS.gene017066:CDS 35.0%
GTCCAAAAGTTGTCAAAAAG+TGG + chr5.1:72453974-72453993 MS.gene017066:intron 35.0%
GTTTACCTTTGATCCATCAA+AGG + chr5.1:72457008-72457027 MS.gene017066:CDS 35.0%
TATGAAGAAGCTAGTACTGT+GGG + chr5.1:72454473-72454492 MS.gene017066:intron 35.0%
TCAAAAGGGCCCTATAATTA+GGG + chr5.1:72456130-72456149 MS.gene017066:intron 35.0%
TGTAGTTGGAAATAGCAAAG+GGG - chr5.1:72455931-72455950 None:intergenic 35.0%
TTCAAAAGGGCCCTATAATT+AGG + chr5.1:72456129-72456148 MS.gene017066:intron 35.0%
! AAGGGTCTTATAATTAGGGA+CGG - chr5.1:72455877-72455896 None:intergenic 35.0%
! AGCAAAGGGGTCTTATAAAA+AGG - chr5.1:72455918-72455937 None:intergenic 35.0%
! AGCTTGTCGGATTTTATCTA+CGG + chr5.1:72453367-72453386 MS.gene017066:CDS 35.0%
! ATGCATCATCCAATCAGTTT+TGG - chr5.1:72454693-72454712 None:intergenic 35.0%
! ATTTTATCTACGGCGAAAAG+TGG + chr5.1:72453377-72453396 MS.gene017066:CDS 35.0%
! GCAAAGGGGTCTTATAAAAA+GGG - chr5.1:72455917-72455936 None:intergenic 35.0%
! GGTGTGTATTTTCTGTATGA+TGG - chr5.1:72456664-72456683 None:intergenic 35.0%
! TATCCTTTAAGAGAGAGAGT+TGG - chr5.1:72456038-72456057 None:intergenic 35.0%
! TCTTTTAAACATACCGGTCA+AGG - chr5.1:72454970-72454989 None:intergenic 35.0%
!! AAATCATTGGTTTACTACCG+TGG + chr5.1:72454650-72454669 MS.gene017066:CDS 35.0%
!! GGCCCTTTTGAAAAAATAAC+GGG - chr5.1:72456121-72456140 None:intergenic 35.0%
!! GGGCCCTTTTGAAAAAATAA+CGG - chr5.1:72456122-72456141 None:intergenic 35.0%
!!! TGCTAGTTTTTCCTTTAGGT+GGG - chr5.1:72454727-72454746 None:intergenic 35.0%
!!! TTGCTAGTTTTTCCTTTAGG+TGG - chr5.1:72454728-72454747 None:intergenic 35.0%
AAAACTTGAGTGAGACAAGG+TGG - chr5.1:72456917-72456936 None:intergenic 40.0%
AAGATGAAGTTGTGCTTCCT+GGG + chr5.1:72453319-72453338 MS.gene017066:CDS 40.0%
AATTTGCATTGCAGGAAGTG+TGG + chr5.1:72456611-72456630 MS.gene017066:intron 40.0%
ACGACTGCTTTATGATGCAT+CGG + chr5.1:72453586-72453605 MS.gene017066:intron 40.0%
AGAGAGAAAAAGGAAGAGAG+AGG + chr5.1:72453917-72453936 MS.gene017066:intron 40.0%
ATAAAGCAGTCGTAGAGATC+AGG - chr5.1:72453579-72453598 None:intergenic 40.0%
ATAAGGCCTAATAGAGTGAC+AGG + chr5.1:72454548-72454567 MS.gene017066:CDS 40.0%
ATGAAGAAGCTAGTACTGTG+GGG + chr5.1:72454474-72454493 MS.gene017066:intron 40.0%
CCAAAAACTTGAGTGAGACA+AGG - chr5.1:72456920-72456939 None:intergenic 40.0%
CTGTAGAATAATACTCCCTC+CGG - chr5.1:72455794-72455813 None:intergenic 40.0%
CTGTATGGAATTTGCATTGC+AGG + chr5.1:72456603-72456622 MS.gene017066:intron 40.0%
TACCTCCGTCCCTAATTATA+GGG - chr5.1:72455888-72455869 None:intergenic 40.0%
TAGGCTATGGATCTATAGCT+AGG + chr5.1:72454353-72454372 MS.gene017066:intron 40.0%
TCCCTTAAGCATGTGTTCAT+TGG + chr5.1:72454938-72454957 MS.gene017066:intron 40.0%
TCGTTATCGAGTCACATTGT+TGG - chr5.1:72454917-72454936 None:intergenic 40.0%
TTGATGAGTTCAATCCGAAG+AGG - chr5.1:72453411-72453430 None:intergenic 40.0%
! AAGGTGTTTATTGCATGCAG+TGG + chr5.1:72453778-72453797 MS.gene017066:intron 40.0%
! CCTTGTCTCACTCAAGTTTT+TGG + chr5.1:72456917-72456936 MS.gene017066:CDS 40.0%
! CGATTCTATGCTGCATGTTT+TGG - chr5.1:72456740-72456759 None:intergenic 40.0%
! TTAATGCTGAGATTTGGGGT+TGG + chr5.1:72455576-72455595 MS.gene017066:intron 40.0%
! TTCACATTAGCTCTCTAGCA+TGG + chr5.1:72456374-72456393 MS.gene017066:intron 40.0%
!! CTGGATTTTGGAAAGCTACA+GGG + chr5.1:72454573-72454592 MS.gene017066:CDS 40.0%
!! TCATTGGTTTGATCCTTGAC+CGG + chr5.1:72454954-72454973 MS.gene017066:intron 40.0%
!! TCTGGATTTTGGAAAGCTAC+AGG + chr5.1:72454572-72454591 MS.gene017066:CDS 40.0%
AAGGGCCCTATAATTAGGGA+CGG + chr5.1:72456134-72456153 MS.gene017066:intron 45.0%
AAGTGGAGAAGAAGCCTCTT+CGG + chr5.1:72453394-72453413 MS.gene017066:CDS 45.0%
CCAACAGATGAAGAGCTTGT+CGG + chr5.1:72453354-72453373 MS.gene017066:CDS 45.0%
CCAGATCCTGTCACTCTATT+AGG - chr5.1:72454557-72454576 None:intergenic 45.0%
CCTAATAGAGTGACAGGATC+TGG + chr5.1:72454554-72454573 MS.gene017066:CDS 45.0%
CGACAAGCTCTTCATCTGTT+GGG - chr5.1:72453356-72453375 None:intergenic 45.0%
CTACCTCCGTCCCTAATTAT+AGG - chr5.1:72455887-72455868 None:intergenic 45.0%
GAAGATGAAGTTGTGCTTCC+TGG + chr5.1:72453318-72453337 MS.gene017066:CDS 45.0%
GAATTTCGTCTCCCACCTAA+AGG + chr5.1:72454713-72454732 MS.gene017066:CDS 45.0%
TGAAGAAGCTAGTACTGTGG+GGG + chr5.1:72454475-72454494 MS.gene017066:intron 45.0%
! GAGTGACAGGATCTGGATTT+TGG + chr5.1:72454561-72454580 MS.gene017066:CDS 45.0%
! GGTCTTATAATTAGGGACGG+AGG - chr5.1:72455874-72455893 None:intergenic 45.0%
! TTTACTACCGTGGAAGTGCA+GGG + chr5.1:72454660-72454679 MS.gene017066:CDS 45.0%
!! GGAAAGGCACCAAAACTGAT+TGG + chr5.1:72454681-72454700 MS.gene017066:CDS 45.0%
!!! AATATAATTTTTGTTTTTTT+TGG + chr5.1:72455278-72455297 MS.gene017066:intron 5.0%
!!! TTTTTTTTATATATTTTATG+AGG - chr5.1:72455836-72455855 None:intergenic 5.0%
AGCTAGTACTGTGGGGGAAA+AGG + chr5.1:72454481-72454500 MS.gene017066:CDS 50.0%
CAAGCTCTTCATCTGTTGGG+TGG - chr5.1:72453353-72453372 None:intergenic 50.0%
CCGACAAGCTCTTCATCTGT+TGG - chr5.1:72453357-72453376 None:intergenic 50.0%
GAGTGAGACAAGGTGGTAGT+TGG - chr5.1:72456910-72456929 None:intergenic 50.0%
GTTGGGTGGAATCTAAACCC+AGG - chr5.1:72453339-72453358 None:intergenic 50.0%
! GTTTACTACCGTGGAAGTGC+AGG + chr5.1:72454659-72454678 MS.gene017066:CDS 50.0%
GGCCCTATAATTAGGGACGG+AGG + chr5.1:72456137-72456156 MS.gene017066:intron 55.0%
TGCCTTTCCCTGCACTTCCA+CGG - chr5.1:72454670-72454689 None:intergenic 55.0%
TTGTTGCACCGCTGTACCGT+GGG - chr5.1:72453744-72453763 None:intergenic 55.0%
TTTGTTGCACCGCTGTACCG+TGG - chr5.1:72453745-72453764 None:intergenic 55.0%
! TACCGTGGAAGTGCAGGGAA+AGG + chr5.1:72454665-72454684 MS.gene017066:CDS 55.0%
GTTCCACTCCCACGGTACAG+CGG + chr5.1:72453733-72453752 MS.gene017066:intron 60.0%
!! TCGGTTCGGTTCCACTCCCA+CGG + chr5.1:72453725-72453744 MS.gene017066:intron 60.0%
GCACCGCTGTACCGTGGGAG+TGG - chr5.1:72453739-72453758 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 72453279 72457056 72453279 ID=MS.gene017066
chr5.1 mRNA 72453279 72457056 72453279 ID=MS.gene017066.t1;Parent=MS.gene017066
chr5.1 exon 72453279 72453471 72453279 ID=MS.gene017066.t1.exon1;Parent=MS.gene017066.t1
chr5.1 CDS 72453279 72453471 72453279 ID=cds.MS.gene017066.t1;Parent=MS.gene017066.t1
chr5.1 exon 72454480 72454787 72454480 ID=MS.gene017066.t1.exon2;Parent=MS.gene017066.t1
chr5.1 CDS 72454480 72454787 72454480 ID=cds.MS.gene017066.t1;Parent=MS.gene017066.t1
chr5.1 exon 72456625 72457056 72456625 ID=MS.gene017066.t1.exon3;Parent=MS.gene017066.t1
chr5.1 CDS 72456625 72457056 72456625 ID=cds.MS.gene017066.t1;Parent=MS.gene017066.t1
Gene Sequence

>MS.gene017066

ATGGATGTGGCAAAGTTAGATAACTTTGATGACAAGAAAGAAGATGAAGTTGTGCTTCCTGGGTTTAGATTCCACCCAACAGATGAAGAGCTTGTCGGATTTTATCTACGGCGAAAAGTGGAGAAGAAGCCTCTTCGGATTGAACTCATCAAAGAGATTGACATATACAAATATGATCCATGGGATTTACCAAGTAAGATTTTATTCTCCTCTCATAATTATATGTTAATGAAACTTATATATACACTATTTCAGCTGCTGTAGAGAAATTTGTTCTACGATTTTTCATAAAATAAGCCTGATCTCTACGACTGCTTTATGATGCATCGGTTGTAGTAATTGTTAGATTAACTTTATCTCTCTAAATCTAATAGATCTTACAACTGTTGCGCTATAAAGCAGTTGTAGATGATCTAAACATTGCATAAGACTCATCATAATTGTACTCGGTTCGGTTCCACTCCCACGGTACAGCGGTGCAACAAAAAAATTATGTAAAAAGGTGTTTATTGCATGCAGTGGTATGTTATCTTAGTTTTCAGAAGAAAAAAAAAGAGTAATGATATTTTGACATCCATTTGATGACAACTTTCTTAACAACCTTGTTTTTCTCACTTCTTATTGGTCAAAAACAATGGAGAGAGAAAAAGGAAGAGAGAGGATAACAACATCATGTGAGTATGAAAGAGAAAGTTGTCCAAAAGTTGTCAAAAAGTGGTTGTCAAAATATCATTTCTCAAAAAAAAATATGTGCTGCTACACTGAGAGAGAGAGAGAGAGCATCTTAATTTATCTTAAATTAATAATTTGACAAGTGAAAATCTAATTTAATTAATAATTTATCTAAAAAGAATATGAATTTAATTGATATTTTTAGCTTTTGAACATTTCATGTGAAAATCTAAATTTTGCTGTTAAAAAAAGTGAAAAACTAAATTATTATATCAGATTGTTGTTCAATAATAGGTAAATTATCTAAATTTTTCTGTTCAATAAAAATGTGAAAATCTAAATTATTATGTCAAATTGTTCACAAAAATATTAACTAAAACATATATATGCATGTTTACATTATAGGCTATGGATCTATAGCTAGGTGCAAGTGCAACTATCCCCATTTTGATTGTAATATATGGTTTCTGATCTCAATTGTCTTTTTTGTTCTTGAATTTACATATATGGTTGTGACGTAAATATGAAGAAGCTAGTACTGTGGGGGAAAAGGAATGCTATTTCTTTTGTTTAAGAGGAAGAAAATACAGGAACAGCATAAGGCCTAATAGAGTGACAGGATCTGGATTTTGGAAAGCTACAGGGATTGATAAACCTATATATTGTGTTAAAGAATCACATGAATGCATTGGACTCAAGAAATCATTGGTTTACTACCGTGGAAGTGCAGGGAAAGGCACCAAAACTGATTGGATGATGCATGAATTTCGTCTCCCACCTAAAGGAAAAACTAGCAATAATCCACTTCTTAATCATAGCAATGATGTTCAAGAAGCTGTAAGTGATTTCATTGTGTTTGCATTTTTATCAAAACTTTCATTGGTTTTGCATTTATAATTAAGGGGTGTTTGAATAAAAAGTTTGATATTAATTAACTTCACTTATCATATAAGAGTTTATTAGCCAACAATGTGACTCGATAACGAGTCCCTTAAGCATGTGTTCATTGGTTTGATCCTTGACCGGTATGTTTAAAAGAATATATATTGGAAGATAATAACATCTTAAATGGTTATGTGTATTTCGAATGATTAATCTCTGACTTTTATATGTGGATATCTTGGACTACCAAAAATACATGAGTTTTTTTTTTAAAAGAAAAGTACATGAGTTTATTGTATAAATTGTTTTGGAAATTGATGAGAAAATGAGAATAAATATGCATAAATTGTTTAAAACAAACTTATGAAAATATCTGGCGGAGCTTATAATAATCAATTCAAAACATTGCCTAAAAAAACCAATTCAAAACAATTAATTTACGAAGAATATAATTTTTGTTTTTTTTGGTTACAAATATAATTTTTGTTTATGTCATAAGATAAGTCCAAATGACTTTTAATTGACTAATCTTGCAAAATATATATTGGCTTAAACACTTTTTTTGTTTTTTTGAGGGGATTGGCTTAAACTTTTTTATTATGTTGTCTGAAAATAGATGAGAGATTTATAAAACGTGAAAGCAAAAGCAATTTTTTTGTGAATAATAAAAAGCAAACCCATCTAGAATCGTATGTAAAGACAAATCTAGAGAGAACATATTCAAAGTAATGACGATAACAACATTAATGCTGAGATTTGGGGTTGGAAACTCGTTCATTTTCAAGATAGGTATGAGCTGAGCATATTTATTAAACTTTGTACTTCCTCCGGTCTTTATTATAAGAAACAATTGACTTTTTTGGTTCATTGTGTAAGTGATGTATCTAGTCTATATTTACAATAAGATACATTAATTATTTTATGAATCTAAAAAGTCAACTTTTTCTTATAATAAAGACCGGAGGGAGTATTATTCTACAGTTAAGCAACATATACTAGACCTCATAAAATATATAAAAAAAAATAAAAAATCTACTACCTCCGTCCCTAATTATAAGACCCTTTTGAGATTTTTTTTTGTCCCTTTTTATAAGACCCCTTTGCTATTTCCAACTACATTAATTATTTCTTTACATACATGCCCCTATTTAATATACATCTTTTTCTTAAATCAACAATAAATAACATGTTGAAAACATAAACCAACTCTCTCTCTTAAAGGATAAAATTGTAAAAACAATAGTAATTACAAACATATTTAATACAAATATCCACTATCTTAATTCCCGTTATTTTTTCAAAAGGGCCCTATAATTAGGGACGGAGGTAGTAAAAAATATCAAATATACATCATCTGGTCACTATTATAAGTAAAAATTAACATTTTAGATTCATTAAATAAATTATGTATGTAGTCTATATTATAGCCGACATATATCACTTATTCAATGAACTTAAAAAATATATTTTTACTTATAATAGTAACCGGAGGTTGTATAATTTATAAATATTAAGAGACCTACAAAACCAACTTTTACTTATTCACATTAGCTCTCTAGCATGGATTGATTTACATCATATTACTAAAAAATTAGTAATTTTATAATTAAAATAATGACTTGGACGTATCAAAATCTATTAGGATACATCATACATGACATGTACATAGACAAAAGTAAGGATCTAGAAACTTTGACATTTGCGCTAATTCAGTTCACTTTACTTTATTAGCAAGCAACCTTTGAAAAGTGTGTTTTTGTTTTTAACATACTGTATGGAATTTGCATTGCAGGAAGTGTGGACACTATGCAGAATTTTCAAACGAATCCCATCATACAGAAAATACACACCAAATGTGAAAAAAGACTTAGAAGAAGCAGCATTCACTATTAACTCTTCAAGTTCCAAAACATGCAGCATAGAATCGGACAACAGCAAACCACAATACTTGACTTTCACAAACTCACAACATGTTGTTCAACAGAATCATGAAACCAAACCATTCATTAATGGACATGTTGACCAAAGATTTAACCACTCATTTCTAAATCAATTAGGCAATGTAGCACAAGTTCCAACTACCACCTTGTCTCACTCAAGTTTTTGGAATGATCAAAATGTTGTGGATGATGCATTTGCAAATGACAATTGGGATGATCTTACATCTGTTGTTCAGTTTACCTTTGATCCATCAAAGGTTTATGATTGTAAAGATTTTAATTAG
Protein sequence

>MS.gene017066.t1

MDVAKLDNFDDKKEDEVVLPGFRFHPTDEELVGFYLRRKVEKKPLRIELIKEIDIYKYDPWDLPKASTVGEKECYFFCLRGRKYRNSIRPNRVTGSGFWKATGIDKPIYCVKESHECIGLKKSLVYYRGSAGKGTKTDWMMHEFRLPPKGKTSNNPLLNHSNDVQEAEVWTLCRIFKRIPSYRKYTPNVKKDLEEAAFTINSSSSKTCSIESDNSKPQYLTFTNSQHVVQQNHETKPFINGHVDQRFNHSFLNQLGNVAQVPTTTLSHSSFWNDQNVVDDAFANDNWDDLTSVVQFTFDPSKVYDCKDFN