Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017163.t1 | XP_003612426.2 | 67.3 | 562 | 51 | 6 | 1 | 450 | 1 | 541 | 3.40E-185 | 657.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017163.t1 | Q940Y3 | 52.7 | 317 | 111 | 6 | 137 | 450 | 443 | 723 | 1.4e-81 | 305.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017163.t1 | G7K2M1 | 67.3 | 562 | 51 | 6 | 1 | 450 | 1 | 541 | 2.5e-185 | 657.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene017163.t1 | TR | ARID |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017163.t1 | MTR_5g024920 | 89.769 | 303 | 16 | 1 | 148 | 450 | 254 | 541 | 0.0 | 566 |
| MS.gene017163.t1 | MTR_5g024920 | 80.255 | 157 | 16 | 3 | 1 | 148 | 1 | 151 | 2.80e-66 | 223 |
| MS.gene017163.t1 | MTR_5g024920 | 89.769 | 303 | 16 | 1 | 148 | 450 | 329 | 616 | 0.0 | 566 |
| MS.gene017163.t1 | MTR_5g024920 | 80.690 | 145 | 13 | 3 | 13 | 148 | 88 | 226 | 4.98e-60 | 207 |
| MS.gene017163.t1 | MTR_3g116200 | 47.826 | 345 | 127 | 9 | 116 | 450 | 7 | 308 | 2.85e-86 | 267 |
| MS.gene017163.t1 | MTR_3g116200 | 48.116 | 345 | 126 | 9 | 116 | 450 | 7 | 308 | 5.00e-86 | 268 |
| MS.gene017163.t1 | MTR_1g033910 | 68.421 | 76 | 11 | 2 | 1 | 69 | 1 | 70 | 1.39e-23 | 94.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017163.t1 | AT2G17410 | 61.742 | 264 | 74 | 4 | 188 | 450 | 480 | 717 | 3.24e-101 | 320 |
| MS.gene017163.t1 | AT2G17410 | 60.902 | 266 | 79 | 4 | 188 | 450 | 480 | 723 | 9.39e-101 | 318 |
| MS.gene017163.t1 | AT2G17410 | 60.902 | 266 | 79 | 4 | 188 | 450 | 480 | 723 | 9.39e-101 | 318 |
| MS.gene017163.t1 | AT1G76510 | 54.475 | 257 | 92 | 5 | 199 | 450 | 137 | 373 | 9.50e-80 | 254 |
| MS.gene017163.t1 | AT1G76510 | 54.475 | 257 | 92 | 5 | 199 | 450 | 137 | 373 | 9.50e-80 | 254 |
| MS.gene017163.t1 | AT1G76510 | 54.475 | 257 | 92 | 5 | 199 | 450 | 137 | 373 | 9.50e-80 | 254 |
| MS.gene017163.t1 | AT1G20910 | 51.362 | 257 | 100 | 4 | 199 | 450 | 101 | 337 | 6.38e-75 | 240 |
| MS.gene017163.t1 | AT1G20910 | 51.362 | 257 | 100 | 4 | 199 | 450 | 101 | 337 | 8.17e-75 | 240 |
| MS.gene017163.t1 | AT1G76510 | 50.000 | 280 | 92 | 6 | 199 | 450 | 137 | 396 | 8.07e-74 | 240 |
Find 120 sgRNAs with CRISPR-Local
Find 317 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGCCATTCTCCATAAAATT+TGG | 0.109421 | 5.3:-74100107 | None:intergenic |
| AATCTTGCTGGTTTGGAATT+AGG | 0.186518 | 5.3:+74099557 | MS.gene017163:CDS |
| TTCCACCAAACCTTTATAAT+AGG | 0.195321 | 5.3:-74103278 | None:intergenic |
| CCACAGTTTCCTGGACTTTC+CGG | 0.221520 | 5.3:+74101896 | MS.gene017163:CDS |
| AGGAGCTTGAAAACTTCTTT+AGG | 0.247131 | 5.3:+74100059 | MS.gene017163:CDS |
| GTGTCAGATGATGTTAAAAT+TGG | 0.259184 | 5.3:+74099668 | MS.gene017163:CDS |
| AACATGTTCTGCTGCGAATC+CGG | 0.285848 | 5.3:-74099965 | None:intergenic |
| GAAATATATGCTTTAGTTCC+TGG | 0.296044 | 5.3:+74103993 | MS.gene017163:CDS |
| ACGTAAGAGCCCATCTTATA+TGG | 0.307472 | 5.3:+74103544 | MS.gene017163:CDS |
| TGGCACTCACAACGTCTTCT+TGG | 0.307906 | 5.3:+74103236 | MS.gene017163:CDS |
| TACGAAAGGCATAACATAAA+AGG | 0.323371 | 5.3:+74102231 | MS.gene017163:CDS |
| ACTTACTTCCTCCTTCTTCT+CGG | 0.327802 | 5.3:-74104043 | None:intergenic |
| TATTGATAATCTTGCTGGTT+TGG | 0.333193 | 5.3:+74099550 | MS.gene017163:CDS |
| TCCACCAAACCTTTATAATA+GGG | 0.338104 | 5.3:-74103277 | None:intergenic |
| GGAGCTTGAAAACTTCTTTA+GGG | 0.352045 | 5.3:+74100060 | MS.gene017163:CDS |
| AGCCATTCTCCATAAAATTT+GGG | 0.353493 | 5.3:-74100106 | None:intergenic |
| TAAGATGGGCTCTTACGTTT+AGG | 0.359154 | 5.3:-74103539 | None:intergenic |
| GCCTGTGAATGTTGGAAATC+AGG | 0.362932 | 5.3:+74102290 | MS.gene017163:CDS |
| GGACATGCACCACAGTTTCC+TGG | 0.366165 | 5.3:+74101887 | MS.gene017163:intron |
| CATAGGACCTTCTGCTGATT+GGG | 0.368858 | 5.3:+74103850 | MS.gene017163:CDS |
| CATAGGACCTTCTGCTGATT+GGG | 0.373243 | 5.3:+74103805 | MS.gene017163:CDS |
| CAAAGTGGGTCAGGGTGTTC+CGG | 0.378330 | 5.3:+74099448 | MS.gene017163:CDS |
| ACATAGGACCTTCTGCTGAT+TGG | 0.380929 | 5.3:+74103804 | MS.gene017163:CDS |
| ACATAGGACCTTCTGCTGAT+TGG | 0.380929 | 5.3:+74103849 | MS.gene017163:CDS |
| GAAGTTTCCTCTACAGTAAC+CGG | 0.388879 | 5.3:-74099629 | None:intergenic |
| ATGATTATTGATAATCTTGC+TGG | 0.390384 | 5.3:+74099545 | MS.gene017163:CDS |
| AGCTAGTGACCCTATTATAA+AGG | 0.397531 | 5.3:+74103268 | MS.gene017163:CDS |
| CCGGAGATATGCTGCTGAAC+AGG | 0.399445 | 5.3:+74103202 | MS.gene017163:CDS |
| TGCTGCTGAACAGGCTATGC+GGG | 0.403913 | 5.3:+74103211 | MS.gene017163:CDS |
| ACTGCATTATCCATATAAGA+TGG | 0.421547 | 5.3:-74103554 | None:intergenic |
| ACCTCCTCCCGCAGAAGGCC+AGG | 0.422953 | 5.3:-74104011 | None:intergenic |
| AGAAAACGACAAAGTGGGTC+AGG | 0.425358 | 5.3:+74099439 | MS.gene017163:CDS |
| TTTCCAACATTCACAGGCTC+TGG | 0.426638 | 5.3:-74102285 | None:intergenic |
| TCACAACGTCTTCTTGGAAA+TGG | 0.433012 | 5.3:+74103242 | MS.gene017163:CDS |
| CTGAACAGGCTATGCGGGGT+TGG | 0.442024 | 5.3:+74103216 | MS.gene017163:CDS |
| TTGGGTATATGTGGATGATA+TGG | 0.442155 | 5.3:+74103823 | MS.gene017163:CDS |
| TGTGTCTAGGGTTTAGCATC+AGG | 0.444410 | 5.3:+74103173 | MS.gene017163:intron |
| ACCTGATTTCCAACATTCAC+AGG | 0.446368 | 5.3:-74102291 | None:intergenic |
| TGTTCAAGATACCCTTCATT+CGG | 0.446726 | 5.3:+74099763 | MS.gene017163:CDS |
| ATACCTTCTGAAACAACCTT+GGG | 0.449374 | 5.3:-74099728 | None:intergenic |
| GATGCTGATCATTATTATGA+TGG | 0.450037 | 5.3:+74099995 | MS.gene017163:CDS |
| ATGGAGAGCTGTGATGAGAT+TGG | 0.450926 | 5.3:+74100255 | MS.gene017163:CDS |
| CCTGTTCAGCAGCATATCTC+CGG | 0.454295 | 5.3:-74103202 | None:intergenic |
| ACATGTTCTGCTGCGAATCC+GGG | 0.460181 | 5.3:-74099964 | None:intergenic |
| TTTAGTTCCTGGCCTTCTGC+GGG | 0.466389 | 5.3:+74104004 | MS.gene017163:CDS |
| GTAGGAGAATGCCGAGAAGA+AGG | 0.475237 | 5.3:+74104032 | MS.gene017163:CDS |
| TCACCTTCTCATAAAATGTC+CGG | 0.477569 | 5.3:-74101915 | None:intergenic |
| TCCTGGCCTTCTGCGGGAGG+AGG | 0.479319 | 5.3:+74104010 | MS.gene017163:CDS |
| TTAGAAGTTGAAAGTAAGGA+TGG | 0.483513 | 5.3:+74099905 | MS.gene017163:CDS |
| TGTCTTAACTGTGGACTTGA+CGG | 0.484187 | 5.3:-74103596 | None:intergenic |
| TTCTGCTGATTGGGTATATG+TGG | 0.487210 | 5.3:+74103814 | MS.gene017163:CDS |
| GATGCATCTTGAAGTTCAAC+CGG | 0.489348 | 5.3:+74099610 | MS.gene017163:CDS |
| TACAAAAGAAAACGACAAAG+TGG | 0.494694 | 5.3:+74099433 | MS.gene017163:CDS |
| AATACCTTCTGAAACAACCT+TGG | 0.501857 | 5.3:-74099729 | None:intergenic |
| CCTCCAGAGCCTGTGAATGT+TGG | 0.501885 | 5.3:+74102282 | MS.gene017163:CDS |
| TGGAGAGCTGTGATGAGATT+GGG | 0.502339 | 5.3:+74100256 | MS.gene017163:CDS |
| TATTATGATGGAAATGAGTC+GGG | 0.503594 | 5.3:+74100007 | MS.gene017163:CDS |
| GAAAATGAAAATTCAAAACT+AGG | 0.506491 | 5.3:+74099509 | MS.gene017163:CDS |
| TCCTCTACATTAACATTCGC+CGG | 0.508778 | 5.3:-74099467 | None:intergenic |
| CTTTAGTTCCTGGCCTTCTG+CGG | 0.509492 | 5.3:+74104003 | MS.gene017163:CDS |
| TTGAAAACTTCTTTAGGGAG+AGG | 0.509895 | 5.3:+74100065 | MS.gene017163:CDS |
| TGTCAGATGATGTTAAAATT+GGG | 0.511487 | 5.3:+74099669 | MS.gene017163:CDS |
| CAGCCGCCTCAACCGAATGA+AGG | 0.516023 | 5.3:-74099775 | None:intergenic |
| TCATATGTTGGACACAGCTA+AGG | 0.516542 | 5.3:+74099802 | MS.gene017163:CDS |
| TTATTATGATGGAAATGAGT+CGG | 0.516599 | 5.3:+74100006 | MS.gene017163:CDS |
| AGATACCCTTCATTCGGTTG+AGG | 0.521109 | 5.3:+74099769 | MS.gene017163:CDS |
| ATGTAAGTTGTGGCGGAGTG+TGG | 0.521969 | 5.3:+74101074 | MS.gene017163:CDS |
| GGCCTTCTGCGGGAGGAGGT+AGG | 0.523574 | 5.3:+74104014 | MS.gene017163:CDS |
| CTTCTTTAGGGAGAGGAGCA+TGG | 0.528705 | 5.3:+74100072 | MS.gene017163:CDS |
| TATGCCTTTCGTAATCAAGA+AGG | 0.542010 | 5.3:-74102221 | None:intergenic |
| AGTTCCTGGCCTTCTGCGGG+AGG | 0.546177 | 5.3:+74104007 | MS.gene017163:CDS |
| AAACCCAAGGTTGTTTCAGA+AGG | 0.551480 | 5.3:+74099725 | MS.gene017163:CDS |
| CTGCATTATCCATATAAGAT+GGG | 0.554084 | 5.3:-74103553 | None:intergenic |
| AGTTCAACCGGTTACTGTAG+AGG | 0.554846 | 5.3:+74099622 | MS.gene017163:CDS |
| GAGGAAGCTGACCATGTCAT+TGG | 0.555265 | 5.3:+74099485 | MS.gene017163:CDS |
| GGAACAACTGTGGTTGACAT+AGG | 0.559671 | 5.3:+74103788 | MS.gene017163:CDS |
| CTCCTACCTCCTCCCGCAGA+AGG | 0.560155 | 5.3:-74104016 | None:intergenic |
| GAGATTGGGAGGCTATGAGA+AGG | 0.562330 | 5.3:+74100270 | MS.gene017163:CDS |
| GTCCTTGTATCATCAGAGGC+AGG | 0.563233 | 5.3:-74099866 | None:intergenic |
| GCCTCTGATGATACAAGGAC+AGG | 0.563733 | 5.3:+74099869 | MS.gene017163:CDS |
| AGGCCCTTCTTGATTACGAA+AGG | 0.570162 | 5.3:+74102217 | MS.gene017163:intron |
| CTGTTCAGCAGCATATCTCC+GGG | 0.570165 | 5.3:-74103201 | None:intergenic |
| GCTCCTTCATAAAAGCTGCT+TGG | 0.572842 | 5.3:-74100042 | None:intergenic |
| CCAACATTCACAGGCTCTGG+AGG | 0.572962 | 5.3:-74102282 | None:intergenic |
| GGCGGCTGATGCTCATATGT+TGG | 0.573754 | 5.3:+74099790 | MS.gene017163:CDS |
| TACCCTTCATTCGGTTGAGG+CGG | 0.575922 | 5.3:+74099772 | MS.gene017163:CDS |
| ATAAAATGTCCGGAAAGTCC+AGG | 0.582795 | 5.3:-74101905 | None:intergenic |
| TGTTAAAATTGGGAAGGAAG+AGG | 0.583384 | 5.3:+74099679 | MS.gene017163:CDS |
| AGCCGCCTCAACCGAATGAA+GGG | 0.583777 | 5.3:-74099774 | None:intergenic |
| CATTCTCCATAAAATTTGGG+AGG | 0.584904 | 5.3:-74100103 | None:intergenic |
| GTTTAGCATCAGGTAGATCC+CGG | 0.586774 | 5.3:+74103183 | MS.gene017163:CDS |
| ATGCCTTTCGTAATCAAGAA+GGG | 0.591525 | 5.3:-74102220 | None:intergenic |
| CATATGTTGGACACAGCTAA+GGG | 0.591530 | 5.3:+74099803 | MS.gene017163:CDS |
| TTCCTGCCTCTGATGATACA+AGG | 0.595382 | 5.3:+74099864 | MS.gene017163:CDS |
| GCCTGTAGATAATGAAAACC+CGG | 0.601904 | 5.3:+74099946 | MS.gene017163:CDS |
| TCCTGTCCTTGTATCATCAG+AGG | 0.605054 | 5.3:-74099870 | None:intergenic |
| AGATGATGTTAAAATTGGGA+AGG | 0.607157 | 5.3:+74099673 | MS.gene017163:CDS |
| AGGTAACCTCATGTAAGTTG+TGG | 0.607979 | 5.3:+74101064 | MS.gene017163:intron |
| TGTAAGTTGTGGCGGAGTGT+GGG | 0.610524 | 5.3:+74101075 | MS.gene017163:CDS |
| GAAAACGACAAAGTGGGTCA+GGG | 0.611750 | 5.3:+74099440 | MS.gene017163:CDS |
| AAATGAGTCGGGAACAGAAG+AGG | 0.612300 | 5.3:+74100018 | MS.gene017163:CDS |
| TAACCTCATGTAAGTTGTGG+CGG | 0.622380 | 5.3:+74101067 | MS.gene017163:CDS |
| ACATATACCCAATCAGCAGA+AGG | 0.633534 | 5.3:-74103812 | None:intergenic |
| ATGCTGCTGAACAGGCTATG+CGG | 0.643981 | 5.3:+74103210 | MS.gene017163:CDS |
| ACAAAAGAAAACGACAAAGT+GGG | 0.644226 | 5.3:+74099434 | MS.gene017163:CDS |
| GGAGAATGCCGAGAAGAAGG+AGG | 0.646714 | 5.3:+74104035 | MS.gene017163:CDS |
| GTGGATGATATGGTTGACAT+AGG | 0.648553 | 5.3:+74103833 | MS.gene017163:CDS |
| TGAATATGCTTCTGATGTGA+AGG | 0.658428 | 5.3:+74099826 | MS.gene017163:CDS |
| GGCTCTGGAGGAGATGCGAT+AGG | 0.659024 | 5.3:-74102270 | None:intergenic |
| TCCGGCGAATGTTAATGTAG+AGG | 0.660878 | 5.3:+74099466 | MS.gene017163:CDS |
| ATATGCTTCTGATGTGAAGG+TGG | 0.676430 | 5.3:+74099829 | MS.gene017163:CDS |
| GCTGCTGAACAGGCTATGCG+GGG | 0.681802 | 5.3:+74103212 | MS.gene017163:CDS |
| CCGGAAAGTCCAGGAAACTG+TGG | 0.692339 | 5.3:-74101896 | None:intergenic |
| TGCTAGGTCGGGAACAACTG+TGG | 0.692766 | 5.3:+74103778 | MS.gene017163:intron |
| GGATGAAAATGTGAAACCCA+AGG | 0.695062 | 5.3:+74099712 | MS.gene017163:CDS |
| GAAAGGCATAACATAAAAGG+CGG | 0.700632 | 5.3:+74102234 | MS.gene017163:CDS |
| GAAGGAAGAGGTGCATGCTG+AGG | 0.700761 | 5.3:+74099691 | MS.gene017163:CDS |
| ACTCCGCCACAACTTACATG+AGG | 0.707054 | 5.3:-74101070 | None:intergenic |
| ATAATGCAGTCAAAGCAGCA+CGG | 0.717518 | 5.3:+74103567 | MS.gene017163:CDS |
| AGAGCTGTGATGAGATTGGG+AGG | 0.730490 | 5.3:+74100259 | MS.gene017163:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAAATTTTAATTATGTTGA+AGG | + | chr5.3:74103456-74103475 | MS.gene017163:intron | 10.0% |
| !!! | TTTTTTGTTAGATTAATAAA+TGG | + | chr5.3:74100827-74100846 | MS.gene017163:intron | 10.0% |
| !! | AAATGAAAATTGGAAATATA+AGG | - | chr5.3:74101184-74101203 | None:intergenic | 15.0% |
| !! | TAATTAAAATTTATAGCACA+AGG | - | chr5.3:74103450-74103469 | None:intergenic | 15.0% |
| !! | TTTCTTGAAATTAAATCATA+AGG | + | chr5.3:74102660-74102679 | MS.gene017163:intron | 15.0% |
| !! | AAAAAAAAAATGCATAGCTA+TGG | - | chr5.3:74101741-74101760 | None:intergenic | 20.0% |
| !! | AAAACGATTAAATATTGTAG+AGG | + | chr5.3:74100359-74100378 | MS.gene017163:intron | 20.0% |
| !! | AAGAAAACAGAAAATGAAAA+AGG | - | chr5.3:74103322-74103341 | None:intergenic | 20.0% |
| !! | AATCATTCAACATAATAGAA+AGG | - | chr5.3:74100311-74100330 | None:intergenic | 20.0% |
| !! | ACAAAAACACAAATGAAAAT+TGG | - | chr5.3:74101194-74101213 | None:intergenic | 20.0% |
| !! | ATATATTACTGAGAATAATC+AGG | - | chr5.3:74101837-74101856 | None:intergenic | 20.0% |
| !! | ATGAAAATAGCAAGATATAA+TGG | + | chr5.3:74100735-74100754 | MS.gene017163:intron | 20.0% |
| !! | GAAAATGAAAATTCAAAACT+AGG | + | chr5.3:74099509-74099528 | MS.gene017163:CDS | 20.0% |
| !! | GAACAATAATGATCTATATA+AGG | + | chr5.3:74102344-74102363 | MS.gene017163:intron | 20.0% |
| !! | GTTTCAAATTACAAGAATAA+CGG | - | chr5.3:74101343-74101362 | None:intergenic | 20.0% |
| !! | TAGTTTATAGATATTCTTGT+TGG | + | chr5.3:74102005-74102024 | MS.gene017163:intron | 20.0% |
| !! | TCATGAGAATTTATGATAAT+TGG | - | chr5.3:74100719-74100738 | None:intergenic | 20.0% |
| !! | TGAAAATAGCAAGATATAAT+GGG | + | chr5.3:74100736-74100755 | MS.gene017163:intron | 20.0% |
| !! | TTCAAAAATACAAGACAATT+AGG | - | chr5.3:74101043-74101062 | None:intergenic | 20.0% |
| !!! | AAGTTGTTTTCATTGTTTAT+AGG | + | chr5.3:74101010-74101029 | MS.gene017163:intron | 20.0% |
| !!! | AATTTTGTCATATTCAAAGA+TGG | - | chr5.3:74100175-74100194 | None:intergenic | 20.0% |
| !!! | AATTTTGTTGGTATATTTAC+AGG | + | chr5.3:74102558-74102577 | MS.gene017163:intron | 20.0% |
| !!! | ACCAATATTTAAAATCACTA+TGG | - | chr5.3:74100386-74100405 | None:intergenic | 20.0% |
| !!! | ATAGTTTTCTTTTAATTCTC+AGG | + | chr5.3:74100900-74100919 | MS.gene017163:intron | 20.0% |
| !!! | ATTGTCTTGTATTTTTGAAT+AGG | + | chr5.3:74101044-74101063 | MS.gene017163:intron | 20.0% |
| !!! | GAGTTGTTTGAAATTTAATT+TGG | + | chr5.3:74100435-74100454 | MS.gene017163:intron | 20.0% |
| !!! | TCCATAGTGATTTTAAATAT+TGG | + | chr5.3:74100382-74100401 | MS.gene017163:intron | 20.0% |
| !!! | TGATTTTAAATATTGGTTGA+TGG | + | chr5.3:74100389-74100408 | MS.gene017163:intron | 20.0% |
| !!! | TTTTTTTTTTATGATATGGG+TGG | + | chr5.3:74101759-74101778 | MS.gene017163:intron | 20.0% |
| ! | AAAATTTATAGCACAAGGAA+TGG | - | chr5.3:74103445-74103464 | None:intergenic | 25.0% |
| ! | AAATTTATAGCACAAGGAAT+GGG | - | chr5.3:74103444-74103463 | None:intergenic | 25.0% |
| ! | AACGTAGATAATTGTAACAT+GGG | - | chr5.3:74102724-74102743 | None:intergenic | 25.0% |
| ! | AATCTAACAAAAAAGATTCC+AGG | - | chr5.3:74100821-74100840 | None:intergenic | 25.0% |
| ! | ACAGTAAAAGGAATATAGAA+AGG | - | chr5.3:74103630-74103649 | None:intergenic | 25.0% |
| ! | ACATTCAGTTAATAAGATTG+TGG | - | chr5.3:74102383-74102402 | None:intergenic | 25.0% |
| ! | AGAGAATTTAAACTTGTAGA+AGG | + | chr5.3:74100572-74100591 | MS.gene017163:intron | 25.0% |
| ! | ATCTAACAAAAAAGATTCCA+GGG | - | chr5.3:74100820-74100839 | None:intergenic | 25.0% |
| ! | ATCTTCTTAGAATGTTTGTT+TGG | + | chr5.3:74101264-74101283 | MS.gene017163:intron | 25.0% |
| ! | CAATGAAACAAGTGTTAAAA+AGG | - | chr5.3:74102175-74102194 | None:intergenic | 25.0% |
| ! | TAAATGGAAAAAGCTATGAT+GGG | + | chr5.3:74101657-74101676 | MS.gene017163:intron | 25.0% |
| ! | TCTTCTTAGAATGTTTGTTT+GGG | + | chr5.3:74101265-74101284 | MS.gene017163:intron | 25.0% |
| ! | TGAAATTGGTTATTGCAATT+AGG | + | chr5.3:74103034-74103053 | MS.gene017163:intron | 25.0% |
| ! | TGTCAGATGATGTTAAAATT+GGG | + | chr5.3:74099669-74099688 | MS.gene017163:CDS | 25.0% |
| ! | TGTGTTGGATTATCTATATA+AGG | + | chr5.3:74102448-74102467 | MS.gene017163:intron | 25.0% |
| ! | TTCATTCAAATTTATGTAGC+TGG | + | chr5.3:74100329-74100348 | MS.gene017163:intron | 25.0% |
| !! | ACAAACATTCTAAGAAGATT+AGG | - | chr5.3:74101263-74101282 | None:intergenic | 25.0% |
| !! | AGTGGTTTAAATTTTACCTT+CGG | + | chr5.3:74102125-74102144 | MS.gene017163:intron | 25.0% |
| !! | ATATGGTCTTAACAATAAGT+GGG | - | chr5.3:74101538-74101557 | None:intergenic | 25.0% |
| !! | ATGATTATTGATAATCTTGC+TGG | + | chr5.3:74099545-74099564 | MS.gene017163:CDS | 25.0% |
| !! | TTATTATGATGGAAATGAGT+CGG | + | chr5.3:74100006-74100025 | MS.gene017163:CDS | 25.0% |
| !!! | AATTTCAAGAAAGCATTAAC+CGG | - | chr5.3:74102652-74102671 | None:intergenic | 25.0% |
| !!! | CTAGCTTTTGAAGTTAAATT+AGG | - | chr5.3:74101494-74101513 | None:intergenic | 25.0% |
| !!! | TAATGGGTTTTGTTAATTAC+TGG | + | chr5.3:74100752-74100771 | MS.gene017163:intron | 25.0% |
| !!! | TGTTTTAGAAGTTGAAAGTA+AGG | + | chr5.3:74099901-74099920 | MS.gene017163:CDS | 25.0% |
| AAACAAGTGTTAAAAAGGTG+AGG | - | chr5.3:74102170-74102189 | None:intergenic | 30.0% | |
| AAGCCATTCTCCATAAAATT+TGG | - | chr5.3:74100110-74100129 | None:intergenic | 30.0% | |
| AATTTCTCATGGCTATAAGT+TGG | - | chr5.3:74103700-74103719 | None:intergenic | 30.0% | |
| ACAAAAGAAAACGACAAAGT+GGG | + | chr5.3:74099434-74099453 | MS.gene017163:CDS | 30.0% | |
| ACACAACACACATAAATATG+TGG | + | chr5.3:74100549-74100568 | MS.gene017163:intron | 30.0% | |
| ACCAATTTCAGATATTGTTC+AGG | - | chr5.3:74103024-74103043 | None:intergenic | 30.0% | |
| ACCTTCTTACATATTGAAGT+GGG | - | chr5.3:74100615-74100634 | None:intergenic | 30.0% | |
| ACTGCATTATCCATATAAGA+TGG | - | chr5.3:74103557-74103576 | None:intergenic | 30.0% | |
| AGATAATTGTAACATGGGTA+GGG | - | chr5.3:74102719-74102738 | None:intergenic | 30.0% | |
| AGATGATGTTAAAATTGGGA+AGG | + | chr5.3:74099673-74099692 | MS.gene017163:CDS | 30.0% | |
| AGATTCCCTTTCTTGAAAAT+CGG | - | chr5.3:74102909-74102928 | None:intergenic | 30.0% | |
| AGCCAAATTTACAAACTCTT+AGG | - | chr5.3:74100871-74100890 | None:intergenic | 30.0% | |
| AGCCATTCTCCATAAAATTT+GGG | - | chr5.3:74100109-74100128 | None:intergenic | 30.0% | |
| AGGGAATCTTATGATATGTT+AGG | + | chr5.3:74102920-74102939 | MS.gene017163:intron | 30.0% | |
| CAATAGAGATAACTCACTTA+AGG | - | chr5.3:74100138-74100157 | None:intergenic | 30.0% | |
| CACCTAAGAGTTTGTAAATT+TGG | + | chr5.3:74100866-74100885 | MS.gene017163:intron | 30.0% | |
| CAGAAAATAGAAGGAATTCT+CGG | - | chr5.3:74102872-74102891 | None:intergenic | 30.0% | |
| CCAAAGTACAAAATTTCTCA+TGG | - | chr5.3:74103711-74103730 | None:intergenic | 30.0% | |
| CTGCATTATCCATATAAGAT+GGG | - | chr5.3:74103556-74103575 | None:intergenic | 30.0% | |
| GAACGTAGATAATTGTAACA+TGG | - | chr5.3:74102725-74102744 | None:intergenic | 30.0% | |
| GATGCTGATCATTATTATGA+TGG | + | chr5.3:74099995-74100014 | MS.gene017163:CDS | 30.0% | |
| GCATAGACTACAAATACTAT+GGG | - | chr5.3:74103070-74103089 | None:intergenic | 30.0% | |
| GTAAATGGAAAAAGCTATGA+TGG | + | chr5.3:74101656-74101675 | MS.gene017163:intron | 30.0% | |
| GTGTCAGATGATGTTAAAAT+TGG | + | chr5.3:74099668-74099687 | MS.gene017163:CDS | 30.0% | |
| TAATGAAGGGAATAGAGTAT+GGG | - | chr5.3:74100797-74100816 | None:intergenic | 30.0% | |
| TACAAAAGAAAACGACAAAG+TGG | + | chr5.3:74099433-74099452 | MS.gene017163:CDS | 30.0% | |
| TACCTTCTTACATATTGAAG+TGG | - | chr5.3:74100616-74100635 | None:intergenic | 30.0% | |
| TACTTGTTTGTGTAGTTAGA+AGG | + | chr5.3:74103662-74103681 | MS.gene017163:intron | 30.0% | |
| TAGATAATTGTAACATGGGT+AGG | - | chr5.3:74102720-74102739 | None:intergenic | 30.0% | |
| TAGGTACATCTGATTCAATA+AGG | - | chr5.3:74103523-74103542 | None:intergenic | 30.0% | |
| TCAAATTTATGTAGCTGGTT+TGG | + | chr5.3:74100334-74100353 | MS.gene017163:intron | 30.0% | |
| TCCACCAAACCTTTATAATA+GGG | - | chr5.3:74103280-74103299 | None:intergenic | 30.0% | |
| TCTGTCAAAATCATTTGTTC+TGG | + | chr5.3:74102527-74102546 | MS.gene017163:intron | 30.0% | |
| TTAGAAGTTGAAAGTAAGGA+TGG | + | chr5.3:74099905-74099924 | MS.gene017163:CDS | 30.0% | |
| TTCAATGCTTCTGATTTCTT+AGG | + | chr5.3:74103357-74103376 | MS.gene017163:intron | 30.0% | |
| TTCCACATTGGATATTGATA+TGG | - | chr5.3:74101555-74101574 | None:intergenic | 30.0% | |
| TTCCACCAAACCTTTATAAT+AGG | - | chr5.3:74103281-74103300 | None:intergenic | 30.0% | |
| TTGCAGTTGTAAAAAAAGAG+TGG | - | chr5.3:74101584-74101603 | None:intergenic | 30.0% | |
| TTTATCCAAAAAGCTCACAA+AGG | - | chr5.3:74101814-74101833 | None:intergenic | 30.0% | |
| ! | AATGATAGTGTGTATTGGAA+AGG | + | chr5.3:74101602-74101621 | MS.gene017163:intron | 30.0% |
| ! | AGTTTAAGGCATCATTATCT+GGG | + | chr5.3:74102977-74102996 | MS.gene017163:intron | 30.0% |
| ! | CAAATTTATGTAGCTGGTTT+GGG | + | chr5.3:74100335-74100354 | MS.gene017163:intron | 30.0% |
| ! | CCATGAGAAATTTTGTACTT+TGG | + | chr5.3:74103708-74103727 | MS.gene017163:intron | 30.0% |
| ! | CTGGTTTAAGAGAATTTTGT+TGG | + | chr5.3:74102546-74102565 | MS.gene017163:intron | 30.0% |
| ! | GAAATATATGCTTTAGTTCC+TGG | + | chr5.3:74103993-74104012 | MS.gene017163:CDS | 30.0% |
| ! | GAGAATTCCTTCTATTTTCT+GGG | + | chr5.3:74102871-74102890 | MS.gene017163:intron | 30.0% |
| ! | GATATGGTCTTAACAATAAG+TGG | - | chr5.3:74101539-74101558 | None:intergenic | 30.0% |
| ! | GTGGTCACATTTTATGTAAA+TGG | + | chr5.3:74101641-74101660 | MS.gene017163:intron | 30.0% |
| ! | TACGAAAGGCATAACATAAA+AGG | + | chr5.3:74102231-74102250 | MS.gene017163:CDS | 30.0% |
| ! | TACTTTTATGCATACCTCTT+CGG | - | chr5.3:74102831-74102850 | None:intergenic | 30.0% |
| ! | TAGTTTAAGGCATCATTATC+TGG | + | chr5.3:74102976-74102995 | MS.gene017163:intron | 30.0% |
| ! | TATGGTCTTAACAATAAGTG+GGG | - | chr5.3:74101537-74101556 | None:intergenic | 30.0% |
| ! | TATTATGATGGAAATGAGTC+GGG | + | chr5.3:74100007-74100026 | MS.gene017163:CDS | 30.0% |
| ! | TATTGATAATCTTGCTGGTT+TGG | + | chr5.3:74099550-74099569 | MS.gene017163:CDS | 30.0% |
| ! | TCAATTGATGATTGTGTCTA+GGG | + | chr5.3:74103161-74103180 | MS.gene017163:intron | 30.0% |
| ! | TTCAAACCTCCCAAATTTTA+TGG | + | chr5.3:74100097-74100116 | MS.gene017163:CDS | 30.0% |
| ! | TTCAATTGATGATTGTGTCT+AGG | + | chr5.3:74103160-74103179 | MS.gene017163:intron | 30.0% |
| ! | TTTCATTTTCACCAATGACA+TGG | - | chr5.3:74099499-74099518 | None:intergenic | 30.0% |
| !! | AGAAGCATTGAACAATTCTA+TGG | - | chr5.3:74103349-74103368 | None:intergenic | 30.0% |
| !! | ATTAGCTGCATTCTAGTTTA+AGG | + | chr5.3:74102963-74102982 | MS.gene017163:intron | 30.0% |
| !! | ATTTCAAGAAAGCATTAACC+GGG | - | chr5.3:74102651-74102670 | None:intergenic | 30.0% |
| !! | TATTTGTTTTCACAATGCAC+TGG | - | chr5.3:74100657-74100676 | None:intergenic | 30.0% |
| !!! | CTCTGAACTAATGCTTTTTT+TGG | + | chr5.3:74100218-74100237 | MS.gene017163:intron | 30.0% |
| !!! | GGTCTTTTTTGTTACTCTTA+TGG | + | chr5.3:74100456-74100475 | MS.gene017163:intron | 30.0% |
| !!! | TGAACTAATGCTTTTTTTGG+TGG | + | chr5.3:74100221-74100240 | MS.gene017163:intron | 30.0% |
| AAAAGATTCCAGGGTAATGA+AGG | - | chr5.3:74100811-74100830 | None:intergenic | 35.0% | |
| AAAGATTCCAGGGTAATGAA+GGG | - | chr5.3:74100810-74100829 | None:intergenic | 35.0% | |
| AATGAAGGGAATAGAGTATG+GGG | - | chr5.3:74100796-74100815 | None:intergenic | 35.0% | |
| ACAAGAATAACGGTTGTATG+AGG | - | chr5.3:74101333-74101352 | None:intergenic | 35.0% | |
| ACCCTATTATAAAGGTTTGG+TGG | + | chr5.3:74103276-74103295 | MS.gene017163:intron | 35.0% | |
| AGCAATCACAACACAGTAAA+AGG | - | chr5.3:74103642-74103661 | None:intergenic | 35.0% | |
| AGCTAGTGACCCTATTATAA+AGG | + | chr5.3:74103268-74103287 | MS.gene017163:CDS | 35.0% | |
| AGGAGCTTGAAAACTTCTTT+AGG | + | chr5.3:74100059-74100078 | MS.gene017163:CDS | 35.0% | |
| AGGTTCTTGAGAACAATTTG+TGG | + | chr5.3:74101622-74101641 | MS.gene017163:intron | 35.0% | |
| ATGCCTTTCGTAATCAAGAA+GGG | - | chr5.3:74102223-74102242 | None:intergenic | 35.0% | |
| ATTTATGCGAATTGCTTGAG+TGG | + | chr5.3:74102107-74102126 | MS.gene017163:intron | 35.0% | |
| ATTTGACGCATTCTTTCTTG+AGG | + | chr5.3:74100953-74100972 | MS.gene017163:intron | 35.0% | |
| CAAGAATAACGGTTGTATGA+GGG | - | chr5.3:74101332-74101351 | None:intergenic | 35.0% | |
| CAAGTAGCATTCATATTTCC+CGG | + | chr5.3:74102630-74102649 | MS.gene017163:intron | 35.0% | |
| CACAAAGGATATCCAGAAAA+GGG | - | chr5.3:74101799-74101818 | None:intergenic | 35.0% | |
| CATACCTATGCTAACAAATG+TGG | + | chr5.3:74103754-74103773 | MS.gene017163:intron | 35.0% | |
| CATTCTCCATAAAATTTGGG+AGG | - | chr5.3:74100106-74100125 | None:intergenic | 35.0% | |
| CCTGCATAAGATGAAAACAA+AGG | - | chr5.3:74101869-74101888 | None:intergenic | 35.0% | |
| CGCATAGACTACAAATACTA+TGG | - | chr5.3:74103071-74103090 | None:intergenic | 35.0% | |
| GACCATATCAATATCCAATG+TGG | + | chr5.3:74101550-74101569 | MS.gene017163:intron | 35.0% | |
| GACGTGCAAGTAAAATATAG+TGG | + | chr5.3:74100514-74100533 | MS.gene017163:intron | 35.0% | |
| GCTCATAATCAAGATTGTGT+TGG | + | chr5.3:74102433-74102452 | MS.gene017163:intron | 35.0% | |
| GGAGCTTGAAAACTTCTTTA+GGG | + | chr5.3:74100060-74100079 | MS.gene017163:CDS | 35.0% | |
| GTAATGAAGGGAATAGAGTA+TGG | - | chr5.3:74100798-74100817 | None:intergenic | 35.0% | |
| GTATTTGTAGTCTATGCGAT+AGG | + | chr5.3:74103073-74103092 | MS.gene017163:intron | 35.0% | |
| GTGACCCTATTATAAAGGTT+TGG | + | chr5.3:74103273-74103292 | MS.gene017163:intron | 35.0% | |
| GTTAAAAAGGTGAGGATTAC+AGG | - | chr5.3:74102162-74102181 | None:intergenic | 35.0% | |
| TATGCCTTTCGTAATCAAGA+AGG | - | chr5.3:74102224-74102243 | None:intergenic | 35.0% | |
| TCACAAAGGATATCCAGAAA+AGG | - | chr5.3:74101800-74101819 | None:intergenic | 35.0% | |
| TCACCTTCTCATAAAATGTC+CGG | - | chr5.3:74101918-74101937 | None:intergenic | 35.0% | |
| TCATGTCTTGATCTCGTTAA+TGG | + | chr5.3:74101139-74101158 | MS.gene017163:intron | 35.0% | |
| TCCCACTTCAATATGTAAGA+AGG | + | chr5.3:74100611-74100630 | MS.gene017163:intron | 35.0% | |
| TCTTTCAAACTCCCAAAGTA+AGG | + | chr5.3:74101102-74101121 | MS.gene017163:intron | 35.0% | |
| TGAATATGCTTCTGATGTGA+AGG | + | chr5.3:74099826-74099845 | MS.gene017163:CDS | 35.0% | |
| TGCAAGTTAGTCCTTACTTT+GGG | - | chr5.3:74101116-74101135 | None:intergenic | 35.0% | |
| TGCTTCTGATTTCTTAGGAT+AGG | + | chr5.3:74103362-74103381 | MS.gene017163:intron | 35.0% | |
| TGTTAAAATTGGGAAGGAAG+AGG | + | chr5.3:74099679-74099698 | MS.gene017163:CDS | 35.0% | |
| TGTTCAAGATACCCTTCATT+CGG | + | chr5.3:74099763-74099782 | MS.gene017163:CDS | 35.0% | |
| TTCCAAACCCAGAAAATAGA+AGG | - | chr5.3:74102881-74102900 | None:intergenic | 35.0% | |
| TTGGGTATATGTGGATGATA+TGG | + | chr5.3:74103823-74103842 | MS.gene017163:CDS | 35.0% | |
| TTTGGTGGAACATAAGGTTA+TGG | + | chr5.3:74100236-74100255 | MS.gene017163:intron | 35.0% | |
| ! | AACTTCAAAAGCTAGCTCTT+AGG | + | chr5.3:74101499-74101518 | MS.gene017163:intron | 35.0% |
| ! | ACTGCAATGATAGTGTGTAT+TGG | + | chr5.3:74101597-74101616 | MS.gene017163:intron | 35.0% |
| ! | ACTTCAAAAGCTAGCTCTTA+GGG | + | chr5.3:74101500-74101519 | MS.gene017163:intron | 35.0% |
| ! | ACTTTTATGCATACCTCTTC+GGG | - | chr5.3:74102830-74102849 | None:intergenic | 35.0% |
| ! | ATGGTCTTAACAATAAGTGG+GGG | - | chr5.3:74101536-74101555 | None:intergenic | 35.0% |
| ! | CGAGAATTCCTTCTATTTTC+TGG | + | chr5.3:74102870-74102889 | MS.gene017163:intron | 35.0% |
| ! | CTCCCAAATTTTATGGAGAA+TGG | + | chr5.3:74100104-74100123 | MS.gene017163:CDS | 35.0% |
| ! | GAAAGGCATAACATAAAAGG+CGG | + | chr5.3:74102234-74102253 | MS.gene017163:CDS | 35.0% |
| ! | GATATCCTTTGTGAGCTTTT+TGG | + | chr5.3:74101806-74101825 | MS.gene017163:intron | 35.0% |
| ! | GCCTGAACAATATCTGAAAT+TGG | + | chr5.3:74103020-74103039 | MS.gene017163:intron | 35.0% |
| ! | GCTGTTTCAAATGTTACTCT+AGG | + | chr5.3:74102197-74102216 | MS.gene017163:intron | 35.0% |
| ! | TAACTCTAAGAGCTATCTTG+TGG | + | chr5.3:74101295-74101314 | MS.gene017163:intron | 35.0% |
| ! | TGTGTTTCTTTACCCTTTTC+TGG | + | chr5.3:74101784-74101803 | MS.gene017163:intron | 35.0% |
| ! | TTCCTTCTATTTTCTGGGTT+TGG | + | chr5.3:74102876-74102895 | MS.gene017163:intron | 35.0% |
| ! | TTGAAAACTTCTTTAGGGAG+AGG | + | chr5.3:74100065-74100084 | MS.gene017163:CDS | 35.0% |
| ! | TTTCCGGACATTTTATGAGA+AGG | + | chr5.3:74101912-74101931 | MS.gene017163:CDS | 35.0% |
| !! | AATACCTTCTGAAACAACCT+TGG | - | chr5.3:74099732-74099751 | None:intergenic | 35.0% |
| !! | AATCTTGCTGGTTTGGAATT+AGG | + | chr5.3:74099557-74099576 | MS.gene017163:CDS | 35.0% |
| !! | ATACCTTCTGAAACAACCTT+GGG | - | chr5.3:74099731-74099750 | None:intergenic | 35.0% |
| !! | TAAAAGTATCATGTGTCCGT+TGG | - | chr5.3:74101446-74101465 | None:intergenic | 35.0% |
| !!! | AAAGTGCCGATTTTCAAGAA+AGG | + | chr5.3:74102900-74102919 | MS.gene017163:intron | 35.0% |
| !!! | AAGTGCCGATTTTCAAGAAA+GGG | + | chr5.3:74102901-74102920 | MS.gene017163:intron | 35.0% |
| !!! | CCTTTGTTTTCATCTTATGC+AGG | + | chr5.3:74101866-74101885 | MS.gene017163:intron | 35.0% |
| !!! | GCTTTTTTTGGTGGAACATA+AGG | + | chr5.3:74100230-74100249 | MS.gene017163:intron | 35.0% |
| !!! | GGGTTTTGTTAATTACTGGA+AGG | + | chr5.3:74100756-74100775 | MS.gene017163:intron | 35.0% |
| AACAAATGTGGATGCTAGGT+CGG | + | chr5.3:74103766-74103785 | MS.gene017163:intron | 40.0% | |
| ACATATACCCAATCAGCAGA+AGG | - | chr5.3:74103815-74103834 | None:intergenic | 40.0% | |
| ACCTGATTTCCAACATTCAC+AGG | - | chr5.3:74102294-74102313 | None:intergenic | 40.0% | |
| ACGTAAGAGCCCATCTTATA+TGG | + | chr5.3:74103544-74103563 | MS.gene017163:CDS | 40.0% | |
| ACTTACTTCCTCCTTCTTCT+CGG | - | chr5.3:74104046-74104065 | None:intergenic | 40.0% | |
| AGGTAACCTCATGTAAGTTG+TGG | + | chr5.3:74101064-74101083 | MS.gene017163:intron | 40.0% | |
| ATAAAATGTCCGGAAAGTCC+AGG | - | chr5.3:74101908-74101927 | None:intergenic | 40.0% | |
| ATAATGCAGTCAAAGCAGCA+CGG | + | chr5.3:74103567-74103586 | MS.gene017163:CDS | 40.0% | |
| ATATGCTTCTGATGTGAAGG+TGG | + | chr5.3:74099829-74099848 | MS.gene017163:CDS | 40.0% | |
| CATATGTTGGACACAGCTAA+GGG | + | chr5.3:74099803-74099822 | MS.gene017163:CDS | 40.0% | |
| GAAGTTTCCTCTACAGTAAC+CGG | - | chr5.3:74099632-74099651 | None:intergenic | 40.0% | |
| GAGTAACTGTGTCTTAACTG+TGG | - | chr5.3:74103608-74103627 | None:intergenic | 40.0% | |
| GATGCATCTTGAAGTTCAAC+CGG | + | chr5.3:74099610-74099629 | MS.gene017163:CDS | 40.0% | |
| GCCTGTAGATAATGAAAACC+CGG | + | chr5.3:74099946-74099965 | MS.gene017163:CDS | 40.0% | |
| GGAAGAAGAGCGAAAATTCT+GGG | - | chr5.3:74102698-74102717 | None:intergenic | 40.0% | |
| GGATGAAAATGTGAAACCCA+AGG | + | chr5.3:74099712-74099731 | MS.gene017163:CDS | 40.0% | |
| GTATAGTGCTCACAGCAATA+AGG | - | chr5.3:74103118-74103137 | None:intergenic | 40.0% | |
| GTGCAAGTTAGTCCTTACTT+TGG | - | chr5.3:74101117-74101136 | None:intergenic | 40.0% | |
| GTGGATGATATGGTTGACAT+AGG | + | chr5.3:74103833-74103852 | MS.gene017163:CDS | 40.0% | |
| TAACCTCATGTAAGTTGTGG+CGG | + | chr5.3:74101067-74101086 | MS.gene017163:CDS | 40.0% | |
| TCACAACGTCTTCTTGGAAA+TGG | + | chr5.3:74103242-74103261 | MS.gene017163:CDS | 40.0% | |
| TCATATGTTGGACACAGCTA+AGG | + | chr5.3:74099802-74099821 | MS.gene017163:CDS | 40.0% | |
| TCATCCTGTTGCTACATCAT+AGG | - | chr5.3:74102756-74102775 | None:intergenic | 40.0% | |
| TCCTCTACATTAACATTCGC+CGG | - | chr5.3:74099470-74099489 | None:intergenic | 40.0% | |
| TCTTTCTTGAGGCAAACTAG+CGG | + | chr5.3:74100964-74100983 | MS.gene017163:intron | 40.0% | |
| TGCTAACAAATGTGGATGCT+AGG | + | chr5.3:74103762-74103781 | MS.gene017163:intron | 40.0% | |
| TGCTACATCATAGGCACATT+GGG | - | chr5.3:74102747-74102766 | None:intergenic | 40.0% | |
| TGTCTTAACTGTGGACTTGA+CGG | - | chr5.3:74103599-74103618 | None:intergenic | 40.0% | |
| TTGCTACATCATAGGCACAT+TGG | - | chr5.3:74102748-74102767 | None:intergenic | 40.0% | |
| TTTATAGCACAAGGAATGGG+AGG | - | chr5.3:74103441-74103460 | None:intergenic | 40.0% | |
| ! | AAACCCAAGGTTGTTTCAGA+AGG | + | chr5.3:74099725-74099744 | MS.gene017163:CDS | 40.0% |
| ! | AATTCTCGGATTTTGCCTTG+GGG | - | chr5.3:74102858-74102877 | None:intergenic | 40.0% |
| ! | ACTTTTACCCAATCAGCAGA+AGG | - | chr5.3:74103860-74103879 | None:intergenic | 40.0% |
| ! | GAATTCTCGGATTTTGCCTT+GGG | - | chr5.3:74102859-74102878 | None:intergenic | 40.0% |
| ! | GCAGCAGAACATGTTTTTCT+TGG | + | chr5.3:74099973-74099992 | MS.gene017163:CDS | 40.0% |
| ! | GCATCCACATTTGTTAGCAT+AGG | - | chr5.3:74103761-74103780 | None:intergenic | 40.0% |
| ! | TAAGATGGGCTCTTACGTTT+AGG | - | chr5.3:74103542-74103561 | None:intergenic | 40.0% |
| ! | TCCGGGTTTTCATTATCTAC+AGG | - | chr5.3:74099950-74099969 | None:intergenic | 40.0% |
| ! | TGGTCTTAACAATAAGTGGG+GGG | - | chr5.3:74101535-74101554 | None:intergenic | 40.0% |
| ! | TTCTGCTGATTGGGTATATG+TGG | + | chr5.3:74103814-74103833 | MS.gene017163:CDS | 40.0% |
| !! | GCATAAAAGTATTTGCCCCA+AGG | + | chr5.3:74102840-74102859 | MS.gene017163:intron | 40.0% |
| !! | TGGTTGATGGTTAAGCTTGT+TGG | + | chr5.3:74100402-74100421 | MS.gene017163:intron | 40.0% |
| !! | TTCACAATGCACTGGCATTT+TGG | - | chr5.3:74100649-74100668 | None:intergenic | 40.0% |
| !!! | ATCAGAGGCAGGAAGTTTTT+TGG | - | chr5.3:74099858-74099877 | None:intergenic | 40.0% |
| AAATGAGTCGGGAACAGAAG+AGG | + | chr5.3:74100018-74100037 | MS.gene017163:CDS | 45.0% | |
| AACATGTTCTGCTGCGAATC+CGG | - | chr5.3:74099968-74099987 | None:intergenic | 45.0% | |
| AACCGTGAAGTTTGCATGCT+TGG | + | chr5.3:74101403-74101422 | MS.gene017163:intron | 45.0% | |
| AAGAGCTATCTTGTGGAGTG+AGG | + | chr5.3:74101302-74101321 | MS.gene017163:intron | 45.0% | |
| ACAAATGTGGATGCTAGGTC+GGG | + | chr5.3:74103767-74103786 | MS.gene017163:intron | 45.0% | |
| ACATAGGACCTTCTGCTGAT+TGG | + | chr5.3:74103804-74103823 | MS.gene017163:CDS | 45.0% | |
| ACCGTGAAGTTTGCATGCTT+GGG | + | chr5.3:74101404-74101423 | MS.gene017163:intron | 45.0% | |
| AGAAAACGACAAAGTGGGTC+AGG | + | chr5.3:74099439-74099458 | MS.gene017163:CDS | 45.0% | |
| AGATACCCTTCATTCGGTTG+AGG | + | chr5.3:74099769-74099788 | MS.gene017163:CDS | 45.0% | |
| AGGCCCTTCTTGATTACGAA+AGG | + | chr5.3:74102217-74102236 | MS.gene017163:intron | 45.0% | |
| AGTTCAACCGGTTACTGTAG+AGG | + | chr5.3:74099622-74099641 | MS.gene017163:CDS | 45.0% | |
| ATGGAGAGCTGTGATGAGAT+TGG | + | chr5.3:74100255-74100274 | MS.gene017163:CDS | 45.0% | |
| ATGTCCAGTCCTAGGCATAA+GGG | - | chr5.3:74101380-74101399 | None:intergenic | 45.0% | |
| CATTTGCAGGTGTGATCCAA+CGG | + | chr5.3:74101427-74101446 | MS.gene017163:intron | 45.0% | |
| CTCTATTCCCTTCATTACCC+TGG | + | chr5.3:74100800-74100819 | MS.gene017163:intron | 45.0% | |
| GAAAACGACAAAGTGGGTCA+GGG | + | chr5.3:74099440-74099459 | MS.gene017163:CDS | 45.0% | |
| GCCTGTGAATGTTGGAAATC+AGG | + | chr5.3:74102290-74102309 | MS.gene017163:CDS | 45.0% | |
| GCTCCTTCATAAAAGCTGCT+TGG | - | chr5.3:74100045-74100064 | None:intergenic | 45.0% | |
| GGAACAACTGTGGTTGACAT+AGG | + | chr5.3:74103788-74103807 | MS.gene017163:CDS | 45.0% | |
| GGGAAGAAGAGCGAAAATTC+TGG | - | chr5.3:74102699-74102718 | None:intergenic | 45.0% | |
| GTTTAGCATCAGGTAGATCC+CGG | + | chr5.3:74103183-74103202 | MS.gene017163:CDS | 45.0% | |
| TAGTCTAGATCAACCCGAAG+AGG | + | chr5.3:74102814-74102833 | MS.gene017163:intron | 45.0% | |
| TCCGGCGAATGTTAATGTAG+AGG | + | chr5.3:74099466-74099485 | MS.gene017163:CDS | 45.0% | |
| TCCTGTCCTTGTATCATCAG+AGG | - | chr5.3:74099873-74099892 | None:intergenic | 45.0% | |
| TGGAGAGCTGTGATGAGATT+GGG | + | chr5.3:74100256-74100275 | MS.gene017163:CDS | 45.0% | |
| TGTGCCTATGATGTAGCAAC+AGG | + | chr5.3:74102749-74102768 | MS.gene017163:intron | 45.0% | |
| TTCCTGCCTCTGATGATACA+AGG | + | chr5.3:74099864-74099883 | MS.gene017163:CDS | 45.0% | |
| TTTCCAACATTCACAGGCTC+TGG | - | chr5.3:74102288-74102307 | None:intergenic | 45.0% | |
| ! | CATAGGACCTTCTGCTGATT+GGG | + | chr5.3:74103805-74103824 | MS.gene017163:CDS | 45.0% |
| ! | GGAATTCTCGGATTTTGCCT+TGG | - | chr5.3:74102860-74102879 | None:intergenic | 45.0% |
| ! | GGACCAAGCAGCTTTTATGA+AGG | + | chr5.3:74100039-74100058 | MS.gene017163:CDS | 45.0% |
| ! | TGTGTCTAGGGTTTAGCATC+AGG | + | chr5.3:74103173-74103192 | MS.gene017163:intron | 45.0% |
| !!! | TTTATATCATTTTAAAATTT+TGG | + | chr5.3:74101462-74101481 | MS.gene017163:intron | 5.0% |
| !!! | TTTTTTTTTTTTTATGATAT+GGG | + | chr5.3:74101756-74101775 | MS.gene017163:intron | 5.0% |
| !!! | TTTTTTTTTTTTTTATGATA+TGG | + | chr5.3:74101755-74101774 | MS.gene017163:intron | 5.0% |
| AAGGGAATAGAGTATGGGGC+AGG | - | chr5.3:74100792-74100811 | None:intergenic | 50.0% | |
| ACAGGACTGCATCATTCCGA+AGG | - | chr5.3:74102144-74102163 | None:intergenic | 50.0% | |
| ACATGTTCTGCTGCGAATCC+GGG | - | chr5.3:74099967-74099986 | None:intergenic | 50.0% | |
| ACTCCGCCACAACTTACATG+AGG | - | chr5.3:74101073-74101092 | None:intergenic | 50.0% | |
| AGAGCTGTGATGAGATTGGG+AGG | + | chr5.3:74100259-74100278 | MS.gene017163:CDS | 50.0% | |
| ATGCTGCTGAACAGGCTATG+CGG | + | chr5.3:74103210-74103229 | MS.gene017163:CDS | 50.0% | |
| CCACAGTTTCCTGGACTTTC+CGG | + | chr5.3:74101896-74101915 | MS.gene017163:CDS | 50.0% | |
| CCTGTTCAGCAGCATATCTC+CGG | - | chr5.3:74103205-74103224 | None:intergenic | 50.0% | |
| CTGTTCAGCAGCATATCTCC+GGG | - | chr5.3:74103204-74103223 | None:intergenic | 50.0% | |
| GAGATTGGGAGGCTATGAGA+AGG | + | chr5.3:74100270-74100289 | MS.gene017163:CDS | 50.0% | |
| GAGGAAGCTGACCATGTCAT+TGG | + | chr5.3:74099485-74099504 | MS.gene017163:CDS | 50.0% | |
| GAGTGGTAAGCGTTCCACAT+TGG | - | chr5.3:74101567-74101586 | None:intergenic | 50.0% | |
| GATGTCCAGTCCTAGGCATA+AGG | - | chr5.3:74101381-74101400 | None:intergenic | 50.0% | |
| GCCCAAGCATGCAAACTTCA+CGG | - | chr5.3:74101408-74101427 | None:intergenic | 50.0% | |
| GCCTCTGATGATACAAGGAC+AGG | + | chr5.3:74099869-74099888 | MS.gene017163:CDS | 50.0% | |
| GTAGGAGAATGCCGAGAAGA+AGG | + | chr5.3:74104032-74104051 | MS.gene017163:CDS | 50.0% | |
| GTCCTTGTATCATCAGAGGC+AGG | - | chr5.3:74099869-74099888 | None:intergenic | 50.0% | |
| TACCCTTCATTCGGTTGAGG+CGG | + | chr5.3:74099772-74099791 | MS.gene017163:CDS | 50.0% | |
| TGGCACTCACAACGTCTTCT+TGG | + | chr5.3:74103236-74103255 | MS.gene017163:CDS | 50.0% | |
| TTGCATGCTTGGGCATTTGC+AGG | + | chr5.3:74101414-74101433 | MS.gene017163:intron | 50.0% | |
| ! | ATGTAAGTTGTGGCGGAGTG+TGG | + | chr5.3:74101074-74101093 | MS.gene017163:CDS | 50.0% |
| ! | CTTCTTTAGGGAGAGGAGCA+TGG | + | chr5.3:74100072-74100091 | MS.gene017163:CDS | 50.0% |
| ! | CTTTAGTTCCTGGCCTTCTG+CGG | + | chr5.3:74104003-74104022 | MS.gene017163:CDS | 50.0% |
| ! | TGTAAGTTGTGGCGGAGTGT+GGG | + | chr5.3:74101075-74101094 | MS.gene017163:CDS | 50.0% |
| ! | TTTAGTTCCTGGCCTTCTGC+GGG | + | chr5.3:74104004-74104023 | MS.gene017163:CDS | 50.0% |
| ACATCCCCTCCCTTATGCCT+AGG | + | chr5.3:74101368-74101387 | MS.gene017163:intron | 55.0% | |
| AGCCGCCTCAACCGAATGAA+GGG | - | chr5.3:74099777-74099796 | None:intergenic | 55.0% | |
| CAGTCCTAGGCATAAGGGAG+GGG | - | chr5.3:74101375-74101394 | None:intergenic | 55.0% | |
| CCAGTCCTAGGCATAAGGGA+GGG | - | chr5.3:74101376-74101395 | None:intergenic | 55.0% | |
| CCGGAAAGTCCAGGAAACTG+TGG | - | chr5.3:74101899-74101918 | None:intergenic | 55.0% | |
| CCGGAGATATGCTGCTGAAC+AGG | + | chr5.3:74103202-74103221 | MS.gene017163:CDS | 55.0% | |
| CCTCCAGAGCCTGTGAATGT+TGG | + | chr5.3:74102282-74102301 | MS.gene017163:CDS | 55.0% | |
| CGGTTCAGATGTCCAGTCCT+AGG | - | chr5.3:74101388-74101407 | None:intergenic | 55.0% | |
| GAATAGAGTATGGGGCAGGC+TGG | - | chr5.3:74100788-74100807 | None:intergenic | 55.0% | |
| GGACATGCACCACAGTTTCC+TGG | + | chr5.3:74101887-74101906 | MS.gene017163:intron | 55.0% | |
| GGAGAATGCCGAGAAGAAGG+AGG | + | chr5.3:74104035-74104054 | MS.gene017163:CDS | 55.0% | |
| GGCGGCTGATGCTCATATGT+TGG | + | chr5.3:74099790-74099809 | MS.gene017163:CDS | 55.0% | |
| TCCAGTCCTAGGCATAAGGG+AGG | - | chr5.3:74101377-74101396 | None:intergenic | 55.0% | |
| TGCTAGGTCGGGAACAACTG+TGG | + | chr5.3:74103778-74103797 | MS.gene017163:intron | 55.0% | |
| TGCTGCTGAACAGGCTATGC+GGG | + | chr5.3:74103211-74103230 | MS.gene017163:CDS | 55.0% | |
| ! | CAAAGTGGGTCAGGGTGTTC+CGG | + | chr5.3:74099448-74099467 | MS.gene017163:CDS | 55.0% |
| ! | CCAACATTCACAGGCTCTGG+AGG | - | chr5.3:74102285-74102304 | None:intergenic | 55.0% |
| ! | GAAGGAAGAGGTGCATGCTG+AGG | + | chr5.3:74099691-74099710 | MS.gene017163:CDS | 55.0% |
| CAGCCGCCTCAACCGAATGA+AGG | - | chr5.3:74099778-74099797 | None:intergenic | 60.0% | |
| CCCTCCCTTATGCCTAGGAC+TGG | + | chr5.3:74101373-74101392 | MS.gene017163:intron | 60.0% | |
| CTGAACAGGCTATGCGGGGT+TGG | + | chr5.3:74103216-74103235 | MS.gene017163:CDS | 60.0% | |
| GCTGCTGAACAGGCTATGCG+GGG | + | chr5.3:74103212-74103231 | MS.gene017163:CDS | 60.0% | |
| !! | GGCTCTGGAGGAGATGCGAT+AGG | - | chr5.3:74102273-74102292 | None:intergenic | 60.0% |
| CTCCTACCTCCTCCCGCAGA+AGG | - | chr5.3:74104019-74104038 | None:intergenic | 65.0% | |
| ! | AGTTCCTGGCCTTCTGCGGG+AGG | + | chr5.3:74104007-74104026 | MS.gene017163:CDS | 65.0% |
| ACCTCCTCCCGCAGAAGGCC+AGG | - | chr5.3:74104014-74104033 | None:intergenic | 70.0% | |
| GGCCTTCTGCGGGAGGAGGT+AGG | + | chr5.3:74104014-74104033 | MS.gene017163:CDS | 70.0% | |
| ! | TCCTGGCCTTCTGCGGGAGG+AGG | + | chr5.3:74104010-74104029 | MS.gene017163:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 74099425 | 74104067 | 74099425 | ID=MS.gene017163 |
| chr5.3 | mRNA | 74099425 | 74104067 | 74099425 | ID=MS.gene017163.t1;Parent=MS.gene017163 |
| chr5.3 | exon | 74099425 | 74100140 | 74099425 | ID=MS.gene017163.t1.exon1;Parent=MS.gene017163.t1 |
| chr5.3 | CDS | 74099425 | 74100140 | 74099425 | ID=cds.MS.gene017163.t1;Parent=MS.gene017163.t1 |
| chr5.3 | exon | 74100252 | 74100291 | 74100252 | ID=MS.gene017163.t1.exon2;Parent=MS.gene017163.t1 |
| chr5.3 | CDS | 74100252 | 74100291 | 74100252 | ID=cds.MS.gene017163.t1;Parent=MS.gene017163.t1 |
| chr5.3 | exon | 74101066 | 74101118 | 74101066 | ID=MS.gene017163.t1.exon3;Parent=MS.gene017163.t1 |
| chr5.3 | CDS | 74101066 | 74101118 | 74101066 | ID=cds.MS.gene017163.t1;Parent=MS.gene017163.t1 |
| chr5.3 | exon | 74101888 | 74101933 | 74101888 | ID=MS.gene017163.t1.exon4;Parent=MS.gene017163.t1 |
| chr5.3 | CDS | 74101888 | 74101933 | 74101888 | ID=cds.MS.gene017163.t1;Parent=MS.gene017163.t1 |
| chr5.3 | exon | 74102219 | 74102311 | 74102219 | ID=MS.gene017163.t1.exon5;Parent=MS.gene017163.t1 |
| chr5.3 | CDS | 74102219 | 74102311 | 74102219 | ID=cds.MS.gene017163.t1;Parent=MS.gene017163.t1 |
| chr5.3 | exon | 74103182 | 74103289 | 74103182 | ID=MS.gene017163.t1.exon6;Parent=MS.gene017163.t1 |
| chr5.3 | CDS | 74103182 | 74103289 | 74103182 | ID=cds.MS.gene017163.t1;Parent=MS.gene017163.t1 |
| chr5.3 | exon | 74103379 | 74103430 | 74103379 | ID=MS.gene017163.t1.exon7;Parent=MS.gene017163.t1 |
| chr5.3 | CDS | 74103379 | 74103430 | 74103379 | ID=cds.MS.gene017163.t1;Parent=MS.gene017163.t1 |
| chr5.3 | exon | 74103534 | 74103609 | 74103534 | ID=MS.gene017163.t1.exon8;Parent=MS.gene017163.t1 |
| chr5.3 | CDS | 74103534 | 74103609 | 74103534 | ID=cds.MS.gene017163.t1;Parent=MS.gene017163.t1 |
| chr5.3 | exon | 74103784 | 74103895 | 74103784 | ID=MS.gene017163.t1.exon9;Parent=MS.gene017163.t1 |
| chr5.3 | CDS | 74103784 | 74103895 | 74103784 | ID=cds.MS.gene017163.t1;Parent=MS.gene017163.t1 |
| chr5.3 | exon | 74103981 | 74104067 | 74103981 | ID=MS.gene017163.t1.exon10;Parent=MS.gene017163.t1 |
| chr5.3 | CDS | 74103981 | 74104067 | 74103981 | ID=cds.MS.gene017163.t1;Parent=MS.gene017163.t1 |
| Gene Sequence |
| Protein sequence |
