Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017232.t1 | XP_003616032.1 | 96.2 | 293 | 11 | 0 | 1 | 293 | 66 | 358 | 1.30E-148 | 535.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017232.t1 | Q6S4P4 | 54.6 | 304 | 119 | 5 | 6 | 293 | 29 | 329 | 1.5e-73 | 277.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017232.t1 | G7K0T5 | 96.2 | 293 | 11 | 0 | 1 | 293 | 66 | 358 | 9.0e-149 | 535.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene017232.t1 | TF | bZIP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017232.t1 | MTR_5g075390 | 97.952 | 293 | 6 | 0 | 1 | 293 | 66 | 358 | 0.0 | 591 |
| MS.gene017232.t1 | MTR_3g467120 | 70.031 | 327 | 62 | 6 | 1 | 293 | 53 | 377 | 7.67e-156 | 440 |
| MS.gene017232.t1 | MTR_3g094020 | 55.474 | 274 | 107 | 5 | 26 | 293 | 47 | 311 | 1.03e-89 | 270 |
| MS.gene017232.t1 | MTR_2g099050 | 55.607 | 214 | 51 | 5 | 24 | 193 | 107 | 320 | 3.25e-60 | 197 |
| MS.gene017232.t1 | MTR_6g034945 | 60.571 | 175 | 55 | 6 | 35 | 203 | 95 | 261 | 9.47e-54 | 177 |
| MS.gene017232.t1 | MTR_4g072090 | 73.684 | 114 | 30 | 0 | 79 | 192 | 345 | 458 | 6.32e-49 | 170 |
| MS.gene017232.t1 | MTR_4g072090 | 76.042 | 96 | 23 | 0 | 79 | 174 | 345 | 440 | 1.64e-40 | 146 |
| MS.gene017232.t1 | MTR_1g023690 | 57.639 | 144 | 51 | 2 | 59 | 192 | 342 | 485 | 8.08e-32 | 124 |
| MS.gene017232.t1 | MTR_2g090900 | 39.869 | 153 | 79 | 4 | 94 | 243 | 191 | 333 | 2.69e-21 | 92.4 |
| MS.gene017232.t1 | MTR_2g090900 | 50.538 | 93 | 46 | 0 | 94 | 186 | 191 | 283 | 3.36e-21 | 92.0 |
| MS.gene017232.t1 | MTR_4g079500 | 48.387 | 93 | 48 | 0 | 94 | 186 | 194 | 286 | 3.26e-20 | 89.4 |
| MS.gene017232.t1 | MTR_1g099030 | 41.818 | 110 | 62 | 2 | 79 | 187 | 109 | 217 | 5.93e-16 | 76.6 |
| MS.gene017232.t1 | MTR_8g088650 | 40.426 | 94 | 51 | 1 | 93 | 186 | 233 | 321 | 1.85e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017232.t1 | AT2G40620 | 52.493 | 341 | 91 | 11 | 3 | 293 | 48 | 367 | 2.04e-91 | 276 |
| MS.gene017232.t1 | AT1G06850 | 57.249 | 269 | 88 | 7 | 29 | 282 | 70 | 326 | 4.84e-88 | 266 |
| MS.gene017232.t1 | AT2G31370 | 51.092 | 229 | 70 | 5 | 24 | 212 | 94 | 320 | 1.40e-61 | 199 |
| MS.gene017232.t1 | AT2G31370 | 51.092 | 229 | 70 | 5 | 24 | 212 | 94 | 320 | 4.77e-61 | 199 |
| MS.gene017232.t1 | AT2G31370 | 51.092 | 229 | 70 | 5 | 24 | 212 | 94 | 320 | 4.77e-61 | 199 |
| MS.gene017232.t1 | AT2G31370 | 51.092 | 229 | 70 | 5 | 24 | 212 | 94 | 320 | 4.77e-61 | 199 |
| MS.gene017232.t1 | AT2G31370 | 51.092 | 229 | 70 | 5 | 24 | 212 | 94 | 320 | 4.77e-61 | 199 |
| MS.gene017232.t1 | AT2G31370 | 51.092 | 229 | 70 | 5 | 24 | 212 | 94 | 320 | 4.77e-61 | 199 |
| MS.gene017232.t1 | AT2G31370 | 51.092 | 229 | 70 | 5 | 24 | 212 | 94 | 320 | 4.77e-61 | 199 |
| MS.gene017232.t1 | AT1G06070 | 52.358 | 212 | 67 | 4 | 24 | 202 | 108 | 318 | 2.05e-56 | 187 |
| MS.gene017232.t1 | AT4G38900 | 67.626 | 139 | 35 | 2 | 63 | 191 | 353 | 491 | 1.43e-49 | 172 |
| MS.gene017232.t1 | AT4G38900 | 67.626 | 139 | 35 | 2 | 63 | 191 | 353 | 491 | 1.43e-49 | 172 |
| MS.gene017232.t1 | AT1G43700 | 60.897 | 156 | 47 | 4 | 51 | 192 | 137 | 292 | 6.46e-48 | 163 |
| MS.gene017232.t1 | AT4G38900 | 64.828 | 145 | 35 | 3 | 63 | 191 | 353 | 497 | 4.78e-47 | 166 |
| MS.gene017232.t1 | AT2G21230 | 69.027 | 113 | 35 | 0 | 79 | 191 | 355 | 467 | 3.26e-43 | 155 |
| MS.gene017232.t1 | AT2G21230 | 69.027 | 113 | 35 | 0 | 79 | 191 | 355 | 467 | 3.26e-43 | 155 |
| MS.gene017232.t1 | AT1G06850 | 63.043 | 138 | 36 | 3 | 29 | 152 | 70 | 206 | 6.06e-43 | 147 |
| MS.gene017232.t1 | AT2G21230 | 64.706 | 119 | 36 | 1 | 79 | 191 | 355 | 473 | 3.39e-40 | 147 |
| MS.gene017232.t1 | AT2G21230 | 71.875 | 96 | 27 | 0 | 79 | 174 | 355 | 450 | 5.60e-37 | 137 |
| MS.gene017232.t1 | AT3G58120 | 49.462 | 93 | 47 | 0 | 94 | 186 | 202 | 294 | 2.15e-21 | 92.4 |
| MS.gene017232.t1 | AT2G42380 | 48.936 | 94 | 48 | 0 | 93 | 186 | 185 | 278 | 3.01e-21 | 92.0 |
| MS.gene017232.t1 | AT2G12900 | 43.269 | 104 | 58 | 1 | 86 | 189 | 109 | 211 | 3.37e-21 | 90.9 |
| MS.gene017232.t1 | AT2G13150 | 41.748 | 103 | 59 | 1 | 86 | 188 | 142 | 243 | 4.12e-18 | 82.4 |
| MS.gene017232.t1 | AT2G12940 | 39.423 | 104 | 62 | 1 | 85 | 188 | 140 | 242 | 1.29e-17 | 81.6 |
| MS.gene017232.t1 | AT2G42380 | 46.988 | 83 | 44 | 0 | 93 | 175 | 185 | 267 | 5.14e-17 | 79.3 |
| MS.gene017232.t1 | AT3G58120 | 47.500 | 80 | 42 | 0 | 94 | 173 | 202 | 281 | 4.68e-16 | 77.0 |
| MS.gene017232.t1 | AT2G21235 | 34.722 | 144 | 62 | 3 | 94 | 205 | 359 | 502 | 1.02e-14 | 74.7 |
| MS.gene017232.t1 | AT2G42380 | 43.617 | 94 | 42 | 1 | 93 | 186 | 185 | 267 | 1.56e-14 | 73.2 |
| MS.gene017232.t1 | AT1G58110 | 42.353 | 85 | 49 | 0 | 103 | 187 | 238 | 322 | 5.44e-12 | 65.9 |
| MS.gene017232.t1 | AT1G58110 | 42.353 | 85 | 49 | 0 | 103 | 187 | 238 | 322 | 5.44e-12 | 65.9 |
Find 82 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACATCCAGTTGCCATTATT+TGG | 0.230060 | 5.2:-63366132 | MS.gene017232:CDS |
| AGCTATGCCTCCTGATAAAT+TGG | 0.296982 | 5.2:-63369468 | MS.gene017232:CDS |
| GAGTTCGTTTGGGGAGATTA+TGG | 0.335399 | 5.2:-63369501 | MS.gene017232:CDS |
| GTTGATGGGTCGAGTTCGTT+TGG | 0.349009 | 5.2:-63369512 | MS.gene017232:CDS |
| ATTCCACCACAAGGTCCTTC+TGG | 0.351170 | 5.2:-63366162 | MS.gene017232:CDS |
| TTCTGAATATGAATGAGAAT+TGG | 0.357804 | 5.2:+63366068 | None:intergenic |
| TTGATGGGTCGAGTTCGTTT+GGG | 0.357989 | 5.2:-63369511 | MS.gene017232:CDS |
| GAAGGACCTTGTGGTGGAAT+TGG | 0.359677 | 5.2:+63366165 | None:intergenic |
| CAAAGCTCAGCCAATTTATC+AGG | 0.368831 | 5.2:+63369458 | None:intergenic |
| TTGATTCAGTAAATTGCATT+TGG | 0.368971 | 5.2:+63366196 | None:intergenic |
| CTGATAAATTGGCTGAGCTT+TGG | 0.380438 | 5.2:-63369457 | MS.gene017232:CDS |
| CGGCATAGTAATTCGGTTGA+TGG | 0.408325 | 5.2:-63369527 | MS.gene017232:CDS |
| TGATGAGATGGCATGCTAGA+TGG | 0.419162 | 5.2:+63366102 | None:intergenic |
| GATGGGGAGTGACCAAATAA+TGG | 0.440624 | 5.2:+63366120 | None:intergenic |
| ATAATGGCAACTGGATGTTC+CGG | 0.448057 | 5.2:+63366136 | None:intergenic |
| GTTGATGATCCGCCGGTGAA+TGG | 0.450476 | 5.2:+63369683 | None:intergenic |
| CGATGAGGCGGAGAAGAATC+CGG | 0.451256 | 5.2:-63369564 | MS.gene017232:CDS |
| GAAAGAAGTTGAGAGATTGA+AGG | 0.452522 | 5.2:-63366271 | MS.gene017232:CDS |
| GTCCCTGAAAACGACCAATC+TGG | 0.466033 | 5.2:+63366031 | None:intergenic |
| GAGGCATCGGCATAGTAATT+CGG | 0.477726 | 5.2:-63369534 | MS.gene017232:CDS |
| TGCAGAAAGAGAAGGATCTT+CGG | 0.478143 | 5.2:+63365972 | None:intergenic |
| TCGTTTGGGGAGATTATGGA+TGG | 0.478452 | 5.2:-63369497 | MS.gene017232:CDS |
| AGTGACCAAATAATGGCAAC+TGG | 0.481233 | 5.2:+63366127 | None:intergenic |
| GTTGCTCCATGGCTTGCAGA+CGG | 0.483654 | 5.2:+63366458 | None:intergenic |
| AATATGAATGAGAATTGGTT+TGG | 0.494880 | 5.2:+63366073 | None:intergenic |
| GGAGATGGTGGAGCAGATCC+AGG | 0.499129 | 5.2:-63369593 | MS.gene017232:CDS |
| TTATTGTAGCGAGACACAAC+AGG | 0.501264 | 5.2:-63366511 | MS.gene017232:intron |
| TCCGCCTCATCGTTTCCACC+TGG | 0.502546 | 5.2:+63369575 | None:intergenic |
| AGAAGAATCCGGTGAGGTCG+AGG | 0.509126 | 5.2:-63369553 | MS.gene017232:CDS |
| ATCCGGTGAGGTCGAGGCAT+CGG | 0.510001 | 5.2:-63369547 | MS.gene017232:CDS |
| TGCCCAACTGACACTATACC+AGG | 0.512274 | 5.2:-63366924 | MS.gene017232:intron |
| TGCTCGTTCAAAAGAGAGAA+AGG | 0.513956 | 5.2:-63367011 | MS.gene017232:CDS |
| GAGTTGTAGCTTCAGTCTGT+AGG | 0.522836 | 5.2:+63366951 | None:intergenic |
| CACAAGGTCCTTCTGGTCAC+CGG | 0.525022 | 5.2:-63366155 | MS.gene017232:CDS |
| CGTCGAGAACAAGTCATCTT+CGG | 0.525043 | 5.2:+63369637 | None:intergenic |
| TTCTAGTTCATGTATATAGC+GGG | 0.529677 | 5.2:+63366988 | None:intergenic |
| GAGAGATTGAAGGTTGCTAC+TGG | 0.533814 | 5.2:-63366261 | MS.gene017232:CDS |
| GCCGGTGAATGGATCGGAAG+GGG | 0.535786 | 5.2:+63369694 | None:intergenic |
| TGAATGGATCGGAAGGGGAG+AGG | 0.537969 | 5.2:+63369699 | None:intergenic |
| TCCCCTTCCGATCCATTCAC+CGG | 0.539027 | 5.2:-63369695 | MS.gene017232:CDS |
| GAGATGTGCTTGTTGCTCCA+TGG | 0.539738 | 5.2:+63366447 | None:intergenic |
| TACATTGACATGGATAAGCT+TGG | 0.540603 | 5.2:-63369614 | MS.gene017232:CDS |
| AACCTGGTATAGTGTCAGTT+GGG | 0.543208 | 5.2:+63366922 | None:intergenic |
| GATGAGATGGCATGCTAGAT+GGG | 0.545329 | 5.2:+63366103 | None:intergenic |
| CCGCCGGTGAATGGATCGGA+AGG | 0.545671 | 5.2:+63369692 | None:intergenic |
| TTATTACAAAATGACCAGAT+TGG | 0.549243 | 5.2:-63366045 | MS.gene017232:CDS |
| AGTTGTAGCTTCAGTCTGTA+GGG | 0.555319 | 5.2:+63366952 | None:intergenic |
| AAACCTGGTATAGTGTCAGT+TGG | 0.558403 | 5.2:+63366921 | None:intergenic |
| TAAGCTCCGTCTGCAAGCCA+TGG | 0.558627 | 5.2:-63366464 | MS.gene017232:CDS |
| GGCATAGTAATTCGGTTGAT+GGG | 0.562173 | 5.2:-63369526 | MS.gene017232:CDS |
| GTTTGGTGCAGTTGATGAGA+TGG | 0.569320 | 5.2:+63366090 | None:intergenic |
| TTGATCCTAAGCGTGCCAAA+AGG | 0.570345 | 5.2:-63369430 | MS.gene017232:intron |
| TGATCCGCCGGTGAATGGAT+CGG | 0.573063 | 5.2:+63369688 | None:intergenic |
| ATGGATAAGCTTGGAGATGG+TGG | 0.575379 | 5.2:-63369605 | MS.gene017232:CDS |
| ACGGCGAGCCTCGATGAGAT+CGG | 0.578645 | 5.2:-63369662 | MS.gene017232:CDS |
| ATTCACCGGCGGATCATCAA+CGG | 0.584726 | 5.2:-63369681 | MS.gene017232:CDS |
| TGCCGATGCCTCGACCTCAC+CGG | 0.585516 | 5.2:+63369545 | None:intergenic |
| CTCTCACTTGCAGAAAGAGA+AGG | 0.594947 | 5.2:+63365964 | None:intergenic |
| TGGATGTTCCGGTGACCAGA+AGG | 0.596869 | 5.2:+63366147 | None:intergenic |
| GGACTTGACATTAGTAACAA+AGG | 0.599628 | 5.2:-63366012 | MS.gene017232:CDS |
| GCTCGCCGTTGATGATCCGC+CGG | 0.602248 | 5.2:+63369676 | None:intergenic |
| GTTCTAGTTCATGTATATAG+CGG | 0.607918 | 5.2:+63366987 | None:intergenic |
| CGTTTGGGGAGATTATGGAT+GGG | 0.615032 | 5.2:-63369496 | MS.gene017232:CDS |
| AGCTCAGCCAATTTATCAGG+AGG | 0.617494 | 5.2:+63369461 | None:intergenic |
| TATACATGAACTAGAACGCA+AGG | 0.631345 | 5.2:-63366981 | MS.gene017232:CDS |
| CAACAAGCACATCTCCGTGA+TGG | 0.633902 | 5.2:-63366439 | MS.gene017232:intron |
| TGATGGGTCGAGTTCGTTTG+GGG | 0.634252 | 5.2:-63369510 | MS.gene017232:CDS |
| TCCAGGTGGAAACGATGAGG+CGG | 0.634286 | 5.2:-63369576 | MS.gene017232:CDS |
| GGTGATAATTGTTACCATCA+CGG | 0.643305 | 5.2:+63366425 | None:intergenic |
| GACATGGATAAGCTTGGAGA+TGG | 0.645716 | 5.2:-63369608 | MS.gene017232:CDS |
| CGGTGACCAGAAGGACCTTG+TGG | 0.645804 | 5.2:+63366156 | None:intergenic |
| GTTCTCGACGTACATTGACA+TGG | 0.649912 | 5.2:-63369624 | MS.gene017232:CDS |
| CGCCGGTGAATGGATCGGAA+GGG | 0.655187 | 5.2:+63369693 | None:intergenic |
| TGACCAGAAGGACCTTGTGG+TGG | 0.657394 | 5.2:+63366159 | None:intergenic |
| CTTCGGATCCGATCTCATCG+AGG | 0.668290 | 5.2:+63369654 | None:intergenic |
| AGATCCAGGTGGAAACGATG+AGG | 0.670305 | 5.2:-63369579 | MS.gene017232:CDS |
| GATGGTGGAGCAGATCCAGG+TGG | 0.680229 | 5.2:-63369590 | MS.gene017232:CDS |
| TACGCTCCAATTCCACCACA+AGG | 0.681715 | 5.2:-63366171 | MS.gene017232:CDS |
| ATGAGATGGCATGCTAGATG+GGG | 0.693250 | 5.2:+63366104 | None:intergenic |
| CGAGATTAAAAGATTCAGTG+TGG | 0.696481 | 5.2:+63366226 | None:intergenic |
| CCTTCCGATCCATTCACCGG+CGG | 0.698144 | 5.2:-63369692 | MS.gene017232:CDS |
| AGGCGGAGAAGAATCCGGTG+AGG | 0.721189 | 5.2:-63369559 | MS.gene017232:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAATTAGGTTTTTATTTT+AGG | + | chr5.2:63367005-63367024 | None:intergenic | 10.0% |
| !!! | AAAATTAGGTTTTTATTTTA+GGG | + | chr5.2:63367004-63367023 | None:intergenic | 10.0% |
| !!! | AAGTTTTTTTTTATTAGTTT+AGG | - | chr5.2:63366381-63366400 | MS.gene017232:intron | 10.0% |
| !!! | AGTTTTTTTTTATTAGTTTA+GGG | - | chr5.2:63366382-63366401 | MS.gene017232:intron | 10.0% |
| !!! | CATATTTTTTTTAATTTAAG+TGG | - | chr5.2:63367360-63367379 | MS.gene017232:intron | 10.0% |
| !!! | TATTTTTTTTAATTTAAGTG+GGG | - | chr5.2:63367362-63367381 | MS.gene017232:intron | 10.0% |
| !!! | TGAATTTTTTTATTAGTTTA+TGG | - | chr5.2:63367827-63367846 | MS.gene017232:intron | 10.0% |
| !! | ATTGAGTGATTATATAAATT+GGG | - | chr5.2:63367248-63367267 | MS.gene017232:intron | 15.0% |
| !!! | AAATTAGGTTTTTATTTTAG+GGG | + | chr5.2:63367003-63367022 | None:intergenic | 15.0% |
| !!! | AAGAAAAAACATTTTTAGTT+AGG | - | chr5.2:63367634-63367653 | MS.gene017232:intron | 15.0% |
| !!! | AATCAACATCTAATAATTTT+TGG | + | chr5.2:63366851-63366870 | None:intergenic | 15.0% |
| !!! | AGAAAAAACATTTTTAGTTA+GGG | - | chr5.2:63367635-63367654 | MS.gene017232:intron | 15.0% |
| !!! | AGACTTAATTTATTTTTTTG+AGG | - | chr5.2:63367394-63367413 | MS.gene017232:intron | 15.0% |
| !!! | TAACTAAAAATGTTTTTTCT+TGG | + | chr5.2:63367635-63367654 | None:intergenic | 15.0% |
| !!! | TATTTTTTTAATAGTGATGA+GGG | - | chr5.2:63368118-63368137 | MS.gene017232:intron | 15.0% |
| !!! | TCTAGAACATTTTATATAAA+AGG | + | chr5.2:63368966-63368985 | None:intergenic | 15.0% |
| !!! | TTATTTTTTTAATAGTGATG+AGG | - | chr5.2:63368117-63368136 | MS.gene017232:intron | 15.0% |
| !! | AAAAAAATTAAGTGAAAGAG+AGG | - | chr5.2:63367091-63367110 | MS.gene017232:intron | 20.0% |
| !! | AACCTAATTCTGTTTATAAT+TGG | + | chr5.2:63367599-63367618 | None:intergenic | 20.0% |
| !! | AATTTATGATTAGAGATTAG+AGG | - | chr5.2:63368179-63368198 | MS.gene017232:intron | 20.0% |
| !! | AGTTAAAAAATTTCAGCAAT+AGG | + | chr5.2:63367757-63367776 | None:intergenic | 20.0% |
| !! | GATTGAGTGATTATATAAAT+TGG | - | chr5.2:63367247-63367266 | MS.gene017232:intron | 20.0% |
| !! | GTTAAAAAATTTCAGCAATA+GGG | + | chr5.2:63367756-63367775 | None:intergenic | 20.0% |
| !! | TTATACAAAAAGATTCTGAA+TGG | + | chr5.2:63368205-63368224 | None:intergenic | 20.0% |
| !! | TTCAATTGTAATAATTGTTG+TGG | - | chr5.2:63368553-63368572 | MS.gene017232:intron | 20.0% |
| !! | TTCCAATTATAAACAGAATT+AGG | - | chr5.2:63367594-63367613 | MS.gene017232:intron | 20.0% |
| !! | TTGAGTGATTATATAAATTG+GGG | - | chr5.2:63367249-63367268 | MS.gene017232:intron | 20.0% |
| !! | TTTACTCATACTTAAATTTG+TGG | - | chr5.2:63369084-63369103 | MS.gene017232:intron | 20.0% |
| !! | TTTAGCTACACAAAAAAATT+AGG | + | chr5.2:63367018-63367037 | None:intergenic | 20.0% |
| !!! | AATTAGGTTTTTATTTTAGG+GGG | + | chr5.2:63367002-63367021 | None:intergenic | 20.0% |
| !!! | AGTCATTTTTTAGCTATAAT+TGG | + | chr5.2:63368907-63368926 | None:intergenic | 20.0% |
| !!! | ATTTTTAACGTATTGTAAGA+AGG | + | chr5.2:63369254-63369273 | None:intergenic | 20.0% |
| !!! | ATTTTTTTAATAGTGATGAG+GGG | - | chr5.2:63368119-63368138 | MS.gene017232:intron | 20.0% |
| !!! | CTTCTTAGATTTAAACTTTT+GGG | - | chr5.2:63368459-63368478 | MS.gene017232:intron | 20.0% |
| !!! | TATAGCTAAAAAATGACTTT+TGG | - | chr5.2:63368909-63368928 | MS.gene017232:intron | 20.0% |
| !!! | TTCTTAGATTTAAACTTTTG+GGG | - | chr5.2:63368460-63368479 | MS.gene017232:intron | 20.0% |
| !!! | TTGTTTTGATAATTTTTGTG+TGG | - | chr5.2:63367923-63367942 | MS.gene017232:intron | 20.0% |
| !!! | TTTTAATAAGCTATCTTAGA+TGG | - | chr5.2:63366587-63366606 | MS.gene017232:intron | 20.0% |
| ! | AAAAACATTAGTGTTTGACA+TGG | - | chr5.2:63368290-63368309 | MS.gene017232:intron | 25.0% |
| ! | AATATGAATGAGAATTGGTT+TGG | + | chr5.2:63369585-63369604 | None:intergenic | 25.0% |
| ! | ACAAATAATCAAGAAGTGAT+TGG | + | chr5.2:63369120-63369139 | None:intergenic | 25.0% |
| ! | ACTAACAACTATATGTGTTT+GGG | + | chr5.2:63368355-63368374 | None:intergenic | 25.0% |
| ! | ATAATTGGAACAAGGAAATA+AGG | + | chr5.2:63368892-63368911 | None:intergenic | 25.0% |
| ! | ATATAGTTGTTAGTGTATCT+TGG | - | chr5.2:63368361-63368380 | MS.gene017232:intron | 25.0% |
| ! | ATATGTGTTTGGGTATTTAT+TGG | + | chr5.2:63368345-63368364 | None:intergenic | 25.0% |
| ! | CAAATAATCAAGAAGTGATT+GGG | + | chr5.2:63369119-63369138 | None:intergenic | 25.0% |
| ! | GTAAAAACTGAAAACAATCA+CGG | + | chr5.2:63369069-63369088 | None:intergenic | 25.0% |
| ! | TACTATACACATAATCACTT+CGG | - | chr5.2:63368990-63369009 | MS.gene017232:intron | 25.0% |
| ! | TGAAGTTAAATAACTCAACT+GGG | - | chr5.2:63369320-63369339 | MS.gene017232:intron | 25.0% |
| ! | TGAGTGATTATATAAATTGG+GGG | - | chr5.2:63367250-63367269 | MS.gene017232:intron | 25.0% |
| ! | TTATTACAAAATGACCAGAT+TGG | - | chr5.2:63369610-63369629 | MS.gene017232:CDS | 25.0% |
| ! | TTCTGAATATGAATGAGAAT+TGG | + | chr5.2:63369590-63369609 | None:intergenic | 25.0% |
| ! | TTGAAGTTAAATAACTCAAC+TGG | - | chr5.2:63369319-63369338 | MS.gene017232:intron | 25.0% |
| ! | TTGATTCAGTAAATTGCATT+TGG | + | chr5.2:63369462-63369481 | None:intergenic | 25.0% |
| !! | CAATCTAGAATCACATAATA+AGG | + | chr5.2:63368017-63368036 | None:intergenic | 25.0% |
| !! | CAATGATGAGTATTTTTCTA+TGG | - | chr5.2:63366320-63366339 | MS.gene017232:intron | 25.0% |
| !! | GCTTCTTAGATTTAAACTTT+TGG | - | chr5.2:63368458-63368477 | MS.gene017232:intron | 25.0% |
| !! | GTTACTTCTTTTTCTTTCTT+CGG | + | chr5.2:63367341-63367360 | None:intergenic | 25.0% |
| !! | TCTTAGATTTAAACTTTTGG+GGG | - | chr5.2:63368461-63368480 | MS.gene017232:intron | 25.0% |
| !!! | AGTAACTCTGTTTTGTTTAT+TGG | - | chr5.2:63368807-63368826 | MS.gene017232:intron | 25.0% |
| !!! | TGGTTTGAGTTTTTGTTAAT+TGG | - | chr5.2:63366340-63366359 | MS.gene017232:intron | 25.0% |
| !!! | TTTTAGCTATAATTGGAACA+AGG | + | chr5.2:63368900-63368919 | None:intergenic | 25.0% |
| AAGCTCAAATACGTCAAATA+TGG | - | chr5.2:63368267-63368286 | MS.gene017232:intron | 30.0% | |
| ACTCATAGAACTTACAAAGT+TGG | + | chr5.2:63368052-63368071 | None:intergenic | 30.0% | |
| ATAAATAGGAGTGGTCAAAA+TGG | + | chr5.2:63366916-63366935 | None:intergenic | 30.0% | |
| CACTAACAACTATATGTGTT+TGG | + | chr5.2:63368356-63368375 | None:intergenic | 30.0% | |
| GTTAAAATGAAGCGAAATTG+AGG | - | chr5.2:63366416-63366435 | MS.gene017232:intron | 30.0% | |
| TGCTAGATTTAAACAGATGA+GGG | + | chr5.2:63367497-63367516 | None:intergenic | 30.0% | |
| TTGCTAGATTTAAACAGATG+AGG | + | chr5.2:63367498-63367517 | None:intergenic | 30.0% | |
| ! | ATTTCCAAGACCAATTTTAC+AGG | + | chr5.2:63367570-63367589 | None:intergenic | 30.0% |
| ! | CACACTGAATCTTTTAATCT+CGG | - | chr5.2:63369430-63369449 | MS.gene017232:intron | 30.0% |
| ! | GATCAAAATTACGAACCTTT+TGG | + | chr5.2:63366243-63366262 | None:intergenic | 30.0% |
| ! | TTTCCAAGACCAATTTTACA+GGG | + | chr5.2:63367569-63367588 | None:intergenic | 30.0% |
| !! | AATGTTGCTTTGTTTGTGAA+TGG | - | chr5.2:63369039-63369058 | MS.gene017232:intron | 30.0% |
| !! | GTTCTAGTTCATGTATATAG+CGG | + | chr5.2:63368671-63368690 | None:intergenic | 30.0% |
| !! | TAAGTTTTGTGAGACTATCT+AGG | - | chr5.2:63366513-63366532 | MS.gene017232:intron | 30.0% |
| !! | TTCTAGTTCATGTATATAGC+GGG | + | chr5.2:63368670-63368689 | None:intergenic | 30.0% |
| !!! | ACATTTTTAGTTAGGGAACT+AGG | - | chr5.2:63367642-63367661 | MS.gene017232:intron | 30.0% |
| !!! | TAATTGTTTTAGACCCTGTT+TGG | + | chr5.2:63366730-63366749 | None:intergenic | 30.0% |
| !!! | TTTATTTTTTTGAGGCCCAT+AGG | - | chr5.2:63367402-63367421 | MS.gene017232:intron | 30.0% |
| !!! | TTTTTAATTTAAGTGGGGTG+TGG | - | chr5.2:63367367-63367386 | MS.gene017232:intron | 30.0% |
| AACATCCAGTTGCCATTATT+TGG | - | chr5.2:63369523-63369542 | MS.gene017232:CDS | 35.0% | |
| AATAAGCTCCTTATCCAAAC+AGG | - | chr5.2:63366713-63366732 | MS.gene017232:intron | 35.0% | |
| ACATAATCACTTCGGTGATT+TGG | - | chr5.2:63368998-63369017 | MS.gene017232:intron | 35.0% | |
| ACCACTCCTATTTATGCAAT+GGG | - | chr5.2:63366921-63366940 | MS.gene017232:intron | 35.0% | |
| AGCATCAGATTTATGTCCAA+AGG | - | chr5.2:63367282-63367301 | MS.gene017232:intron | 35.0% | |
| ATAAGCTCCTTATCCAAACA+GGG | - | chr5.2:63366714-63366733 | MS.gene017232:intron | 35.0% | |
| ATTATTTGACTGGGATGAGT+TGG | - | chr5.2:63367973-63367992 | MS.gene017232:intron | 35.0% | |
| ATTTATCATTCCTCCGTTGT+GGG | - | chr5.2:63367141-63367160 | MS.gene017232:intron | 35.0% | |
| CAGATACATGACAGAATTAG+GGG | + | chr5.2:63367706-63367725 | None:intergenic | 35.0% | |
| CATAATCACTTCGGTGATTT+GGG | - | chr5.2:63368999-63369018 | MS.gene017232:intron | 35.0% | |
| CCAGATACATGACAGAATTA+GGG | + | chr5.2:63367707-63367726 | None:intergenic | 35.0% | |
| CGAGATTAAAAGATTCAGTG+TGG | + | chr5.2:63369432-63369451 | None:intergenic | 35.0% | |
| GAAAGAAGTTGAGAGATTGA+AGG | - | chr5.2:63369384-63369403 | MS.gene017232:intron | 35.0% | |
| GAACAAGAATTGTTCTACAC+AGG | + | chr5.2:63366763-63366782 | None:intergenic | 35.0% | |
| GAGAGGTGAAATTTACCTAA+CGG | - | chr5.2:63367108-63367127 | MS.gene017232:intron | 35.0% | |
| GATAAATGTCAACACAAACC+TGG | + | chr5.2:63368752-63368771 | None:intergenic | 35.0% | |
| GGACTTGACATTAGTAACAA+AGG | - | chr5.2:63369643-63369662 | MS.gene017232:CDS | 35.0% | |
| GGTGATAATTGTTACCATCA+CGG | + | chr5.2:63369233-63369252 | None:intergenic | 35.0% | |
| GTAAGTTCTATGAGTAACTG+AGG | - | chr5.2:63368057-63368076 | MS.gene017232:intron | 35.0% | |
| GTGATTATATAAATTGGGGG+TGG | - | chr5.2:63367253-63367272 | MS.gene017232:intron | 35.0% | |
| GTTGTTTGTAATTGTGCTTG+TGG | - | chr5.2:63367881-63367900 | MS.gene017232:intron | 35.0% | |
| TACATTGACATGGATAAGCT+TGG | - | chr5.2:63366041-63366060 | MS.gene017232:CDS | 35.0% | |
| TATACATGAACTAGAACGCA+AGG | - | chr5.2:63368674-63368693 | MS.gene017232:intron | 35.0% | |
| TATATAAATTGGGGGTGGTT+TGG | - | chr5.2:63367258-63367277 | MS.gene017232:intron | 35.0% | |
| TCTAGACTCTAATTCTCCTT+TGG | + | chr5.2:63367301-63367320 | None:intergenic | 35.0% | |
| TTCACTCCCATTGCATAAAT+AGG | + | chr5.2:63366930-63366949 | None:intergenic | 35.0% | |
| ! | TTCCAAGACCAATTTTACAG+GGG | + | chr5.2:63367568-63367587 | None:intergenic | 35.0% |
| ! | TTTTAGACCCTGTTTGGATA+AGG | + | chr5.2:63366724-63366743 | None:intergenic | 35.0% |
| !! | TAGATTTAAACTTTTGGGGG+TGG | - | chr5.2:63368464-63368483 | MS.gene017232:intron | 35.0% |
| !! | TTCAAGTTTTACTCACCTTC+CGG | - | chr5.2:63366780-63366799 | MS.gene017232:intron | 35.0% |
| !!! | CTCGGCTCTCTTTTTAAAAT+AGG | - | chr5.2:63366976-63366995 | MS.gene017232:CDS | 35.0% |
| AAACCTGGTATAGTGTCAGT+TGG | + | chr5.2:63368737-63368756 | None:intergenic | 40.0% | |
| AACCTGGTATAGTGTCAGTT+GGG | + | chr5.2:63368736-63368755 | None:intergenic | 40.0% | |
| ACTCGTCGCAATTATTTGAC+TGG | - | chr5.2:63367963-63367982 | MS.gene017232:intron | 40.0% | |
| AGCCTCCTATTTCATAGGAA+CGG | + | chr5.2:63366958-63366977 | None:intergenic | 40.0% | |
| AGCTATGCCTCCTGATAAAT+TGG | - | chr5.2:63366187-63366206 | MS.gene017232:CDS | 40.0% | |
| AGTGACCAAATAATGGCAAC+TGG | + | chr5.2:63369531-63369550 | None:intergenic | 40.0% | |
| AGTTGTAGCTTCAGTCTGTA+GGG | + | chr5.2:63368706-63368725 | None:intergenic | 40.0% | |
| ATAATGGCAACTGGATGTTC+CGG | + | chr5.2:63369522-63369541 | None:intergenic | 40.0% | |
| CAAAGCTCAGCCAATTTATC+AGG | + | chr5.2:63366200-63366219 | None:intergenic | 40.0% | |
| CCACGTTGTTCTATGTAGAT+GGG | - | chr5.2:63368436-63368455 | MS.gene017232:intron | 40.0% | |
| CCCTAATTCTGTCATGTATC+TGG | - | chr5.2:63367704-63367723 | MS.gene017232:intron | 40.0% | |
| CTCGTCGCAATTATTTGACT+GGG | - | chr5.2:63367964-63367983 | MS.gene017232:intron | 40.0% | |
| CTGATAAATTGGCTGAGCTT+TGG | - | chr5.2:63366198-63366217 | MS.gene017232:CDS | 40.0% | |
| GAACAAGGAAATAAGGCACA+AGG | + | chr5.2:63368885-63368904 | None:intergenic | 40.0% | |
| GACCACTCCTATTTATGCAA+TGG | - | chr5.2:63366920-63366939 | MS.gene017232:intron | 40.0% | |
| GATTTATCATTCCTCCGTTG+TGG | - | chr5.2:63367140-63367159 | MS.gene017232:intron | 40.0% | |
| GCCAGATACATGACAGAATT+AGG | + | chr5.2:63367708-63367727 | None:intergenic | 40.0% | |
| GGCATAGTAATTCGGTTGAT+GGG | - | chr5.2:63366129-63366148 | MS.gene017232:CDS | 40.0% | |
| GTATCTGGCTACATGTTCAA+TGG | - | chr5.2:63367719-63367738 | MS.gene017232:intron | 40.0% | |
| TAAATCCAAACGACACCGTT+AGG | + | chr5.2:63367126-63367145 | None:intergenic | 40.0% | |
| TCCACGTTGTTCTATGTAGA+TGG | - | chr5.2:63368435-63368454 | MS.gene017232:intron | 40.0% | |
| TCCCATTGCATAAATAGGAG+TGG | + | chr5.2:63366925-63366944 | None:intergenic | 40.0% | |
| TGCAGAAAGAGAAGGATCTT+CGG | + | chr5.2:63369686-63369705 | None:intergenic | 40.0% | |
| TGCTCGTTCAAAAGAGAGAA+AGG | - | chr5.2:63368644-63368663 | MS.gene017232:intron | 40.0% | |
| TGGTATCACCCCTGTAAAAT+TGG | - | chr5.2:63367557-63367576 | MS.gene017232:intron | 40.0% | |
| TTATGCAATGGGAGTGAACA+TGG | - | chr5.2:63366932-63366951 | MS.gene017232:CDS | 40.0% | |
| TTATTGTAGCGAGACACAAC+AGG | - | chr5.2:63369144-63369163 | MS.gene017232:intron | 40.0% | |
| TTCCTATGAAATAGGAGGCT+CGG | - | chr5.2:63366958-63366977 | MS.gene017232:CDS | 40.0% | |
| TTTGGCATTAACCCTCCTTA+GGG | + | chr5.2:63366833-63366852 | None:intergenic | 40.0% | |
| ! | AATTTTACAGGGGTGATACC+AGG | + | chr5.2:63367558-63367577 | None:intergenic | 40.0% |
| ! | ATTTTACAGGGGTGATACCA+GGG | + | chr5.2:63367557-63367576 | None:intergenic | 40.0% |
| ! | GGGAACTAGTTCTCAATGAA+GGG | + | chr5.2:63367686-63367705 | None:intergenic | 40.0% |
| ! | TTTTGGCATTAACCCTCCTT+AGG | + | chr5.2:63366834-63366853 | None:intergenic | 40.0% |
| !! | ATGAGTAACTGAGGCATTGT+TGG | - | chr5.2:63368066-63368085 | MS.gene017232:intron | 40.0% |
| !! | ATTTAAACTTTTGGGGGTGG+AGG | - | chr5.2:63368467-63368486 | MS.gene017232:intron | 40.0% |
| !! | ATTTACCTAACGGTGTCGTT+TGG | - | chr5.2:63367118-63367137 | MS.gene017232:intron | 40.0% |
| !!! | TTTTTGAGGCCCATAGGTTT+TGG | - | chr5.2:63367408-63367427 | MS.gene017232:intron | 40.0% |
| AACAGACCCTTAGCACAACT+CGG | + | chr5.2:63366475-63366494 | None:intergenic | 45.0% | |
| AGCTCAGCCAATTTATCAGG+AGG | + | chr5.2:63366197-63366216 | None:intergenic | 45.0% | |
| AGTTGTGCTAAGGGTCTGTT+TGG | - | chr5.2:63366475-63366494 | MS.gene017232:CDS | 45.0% | |
| ATGAGATGGCATGCTAGATG+GGG | + | chr5.2:63369554-63369573 | None:intergenic | 45.0% | |
| ATGGATAAGCTTGGAGATGG+TGG | - | chr5.2:63366050-63366069 | MS.gene017232:CDS | 45.0% | |
| CATGGCCGTTCCTATGAAAT+AGG | - | chr5.2:63366950-63366969 | MS.gene017232:CDS | 45.0% | |
| CCCATCTACATAGAACAACG+TGG | + | chr5.2:63368439-63368458 | None:intergenic | 45.0% | |
| CGGCATAGTAATTCGGTTGA+TGG | - | chr5.2:63366128-63366147 | MS.gene017232:CDS | 45.0% | |
| CGTCGAGAACAAGTCATCTT+CGG | + | chr5.2:63366021-63366040 | None:intergenic | 45.0% | |
| CGTTTGGGGAGATTATGGAT+GGG | - | chr5.2:63366159-63366178 | MS.gene017232:CDS | 45.0% | |
| CTCTCACTTGCAGAAAGAGA+AGG | + | chr5.2:63369694-63369713 | None:intergenic | 45.0% | |
| GACATGGATAAGCTTGGAGA+TGG | - | chr5.2:63366047-63366066 | MS.gene017232:CDS | 45.0% | |
| GAGAGATTGAAGGTTGCTAC+TGG | - | chr5.2:63369394-63369413 | MS.gene017232:intron | 45.0% | |
| GAGTTCGTTTGGGGAGATTA+TGG | - | chr5.2:63366154-63366173 | MS.gene017232:CDS | 45.0% | |
| GAGTTGTAGCTTCAGTCTGT+AGG | + | chr5.2:63368707-63368726 | None:intergenic | 45.0% | |
| GATGAGATGGCATGCTAGAT+GGG | + | chr5.2:63369555-63369574 | None:intergenic | 45.0% | |
| GATGGGGAGTGACCAAATAA+TGG | + | chr5.2:63369538-63369557 | None:intergenic | 45.0% | |
| GGAAAGGGGAAGGAAACAAA+TGG | - | chr5.2:63367162-63367181 | MS.gene017232:intron | 45.0% | |
| GTGGAGGATAATGTGAGAGT+GGG | - | chr5.2:63368483-63368502 | MS.gene017232:intron | 45.0% | |
| GTGGTCAAAATGGCTGCTAA+TGG | + | chr5.2:63366906-63366925 | None:intergenic | 45.0% | |
| GTTCTCGACGTACATTGACA+TGG | - | chr5.2:63366031-63366050 | MS.gene017232:CDS | 45.0% | |
| TCGTTTGGGGAGATTATGGA+TGG | - | chr5.2:63366158-63366177 | MS.gene017232:CDS | 45.0% | |
| TGATGAGATGGCATGCTAGA+TGG | + | chr5.2:63369556-63369575 | None:intergenic | 45.0% | |
| TGGAGGATAATGTGAGAGTG+GGG | - | chr5.2:63368484-63368503 | MS.gene017232:intron | 45.0% | |
| TTCTCTCCGAGTTGTGCTAA+GGG | - | chr5.2:63366466-63366485 | MS.gene017232:CDS | 45.0% | |
| TTGATCCTAAGCGTGCCAAA+AGG | - | chr5.2:63366225-63366244 | MS.gene017232:CDS | 45.0% | |
| TTGGCATTAACCCTCCTTAG+GGG | + | chr5.2:63366832-63366851 | None:intergenic | 45.0% | |
| ! | CACCCCTGTAAAATTGGTCT+TGG | - | chr5.2:63367563-63367582 | MS.gene017232:intron | 45.0% |
| ! | GGGGAACTAGTTCTCAATGA+AGG | + | chr5.2:63367687-63367706 | None:intergenic | 45.0% |
| ! | TTGATGGGTCGAGTTCGTTT+GGG | - | chr5.2:63366144-63366163 | MS.gene017232:CDS | 45.0% |
| !! | GACCAGATTGGTCGTTTTCA+GGG | - | chr5.2:63369622-63369641 | MS.gene017232:CDS | 45.0% |
| !! | GAGGCATCGGCATAGTAATT+CGG | - | chr5.2:63366121-63366140 | MS.gene017232:CDS | 45.0% |
| !! | GTTTGGTGCAGTTGATGAGA+TGG | + | chr5.2:63369568-63369587 | None:intergenic | 45.0% |
| !! | TGACCAGATTGGTCGTTTTC+AGG | - | chr5.2:63369621-63369640 | MS.gene017232:CDS | 45.0% |
| !!! | ATATTTTTTTTAATTTAAGT+GGG | - | chr5.2:63367361-63367380 | MS.gene017232:intron | 5.0% |
| AGATCCAGGTGGAAACGATG+AGG | - | chr5.2:63366076-63366095 | MS.gene017232:CDS | 50.0% | |
| AGCCGAGCCTCCTATTTCAT+AGG | + | chr5.2:63366963-63366982 | None:intergenic | 50.0% | |
| ATCGACAGTTAGAGTGACCC+TGG | - | chr5.2:63367537-63367556 | MS.gene017232:intron | 50.0% | |
| ATTCACCGGCGGATCATCAA+CGG | - | chr5.2:63365974-63365993 | MS.gene017232:CDS | 50.0% | |
| ATTCCACCACAAGGTCCTTC+TGG | - | chr5.2:63369493-63369512 | MS.gene017232:CDS | 50.0% | |
| ATTCCTCCGTTGTGGGAAAG+GGG | - | chr5.2:63367148-63367167 | MS.gene017232:intron | 50.0% | |
| CAACAAGCACATCTCCGTGA+TGG | - | chr5.2:63369216-63369235 | MS.gene017232:intron | 50.0% | |
| CATTCCTCCGTTGTGGGAAA+GGG | - | chr5.2:63367147-63367166 | MS.gene017232:intron | 50.0% | |
| CCTGTAATCCGGAATTTGGC+CGG | + | chr5.2:63366802-63366821 | None:intergenic | 50.0% | |
| CTTAGCACAACTCGGAGAGA+AGG | + | chr5.2:63366467-63366486 | None:intergenic | 50.0% | |
| CTTCTCTCCGAGTTGTGCTA+AGG | - | chr5.2:63366465-63366484 | MS.gene017232:CDS | 50.0% | |
| GAGGCCTGTAATCCGGAATT+TGG | + | chr5.2:63366806-63366825 | None:intergenic | 50.0% | |
| GGCCGTTCCTATGAAATAGG+AGG | - | chr5.2:63366953-63366972 | MS.gene017232:CDS | 50.0% | |
| GGGTTAAGTGTTTCACTCCC+AGG | + | chr5.2:63367477-63367496 | None:intergenic | 50.0% | |
| GGTGGAGGATAATGTGAGAG+TGG | - | chr5.2:63368482-63368501 | MS.gene017232:intron | 50.0% | |
| GTCCCTGAAAACGACCAATC+TGG | + | chr5.2:63369627-63369646 | None:intergenic | 50.0% | |
| TAACCCTCCTTAGGGGAAAG+AGG | + | chr5.2:63366825-63366844 | None:intergenic | 50.0% | |
| TAATCCGGAATTTGGCCGGA+AGG | + | chr5.2:63366798-63366817 | None:intergenic | 50.0% | |
| TACGCTCCAATTCCACCACA+AGG | - | chr5.2:63369484-63369503 | MS.gene017232:CDS | 50.0% | |
| TCATTCCTCCGTTGTGGGAA+AGG | - | chr5.2:63367146-63367165 | MS.gene017232:intron | 50.0% | |
| TGCCCAACTGACACTATACC+AGG | - | chr5.2:63368731-63368750 | MS.gene017232:intron | 50.0% | |
| TTACAGGCCTCTTTCCCCTA+AGG | - | chr5.2:63366815-63366834 | MS.gene017232:intron | 50.0% | |
| TTCCTTCCCCTTTCCCACAA+CGG | + | chr5.2:63367157-63367176 | None:intergenic | 50.0% | |
| ! | ACGAACCTTTTGGCACGCTT+AGG | + | chr5.2:63366233-63366252 | None:intergenic | 50.0% |
| ! | GAAGGACCTTGTGGTGGAAT+TGG | + | chr5.2:63369493-63369512 | None:intergenic | 50.0% |
| ! | GAGATGTGCTTGTTGCTCCA+TGG | + | chr5.2:63369211-63369230 | None:intergenic | 50.0% |
| ! | GTTGATGGGTCGAGTTCGTT+TGG | - | chr5.2:63366143-63366162 | MS.gene017232:CDS | 50.0% |
| ! | TGATGGGTCGAGTTCGTTTG+GGG | - | chr5.2:63366145-63366164 | MS.gene017232:CDS | 50.0% |
| !! | TTGAGGCCCATAGGTTTTGG+AGG | - | chr5.2:63367411-63367430 | MS.gene017232:intron | 50.0% |
| AAGTGTTTCACTCCCAGGCC+CGG | + | chr5.2:63367472-63367491 | None:intergenic | 55.0% | |
| AGAAGAATCCGGTGAGGTCG+AGG | - | chr5.2:63366102-63366121 | MS.gene017232:CDS | 55.0% | |
| AGGCCTCTTTCCCCTAAGGA+GGG | - | chr5.2:63366819-63366838 | MS.gene017232:intron | 55.0% | |
| CACAAGGTCCTTCTGGTCAC+CGG | - | chr5.2:63369500-63369519 | MS.gene017232:CDS | 55.0% | |
| CCGGCCAAATTCCGGATTAC+AGG | - | chr5.2:63366799-63366818 | MS.gene017232:intron | 55.0% | |
| CGATGAGGCGGAGAAGAATC+CGG | - | chr5.2:63366091-63366110 | MS.gene017232:CDS | 55.0% | |
| CTCACCTTCCGGCCAAATTC+CGG | - | chr5.2:63366791-63366810 | MS.gene017232:intron | 55.0% | |
| CTTCGGATCCGATCTCATCG+AGG | + | chr5.2:63366004-63366023 | None:intergenic | 55.0% | |
| GGGGAAAGAGGCCTGTAATC+CGG | + | chr5.2:63366813-63366832 | None:intergenic | 55.0% | |
| TAAGCTCCGTCTGCAAGCCA+TGG | - | chr5.2:63369191-63369210 | MS.gene017232:intron | 55.0% | |
| TCCAGGTGGAAACGATGAGG+CGG | - | chr5.2:63366079-63366098 | MS.gene017232:CDS | 55.0% | |
| TCCCCTTCCGATCCATTCAC+CGG | - | chr5.2:63365960-63365979 | MS.gene017232:CDS | 55.0% | |
| TGAATGGATCGGAAGGGGAG+AGG | + | chr5.2:63365959-63365978 | None:intergenic | 55.0% | |
| TGACCAGAAGGACCTTGTGG+TGG | + | chr5.2:63369499-63369518 | None:intergenic | 55.0% | |
| TGATCCGCCGGTGAATGGAT+CGG | + | chr5.2:63365970-63365989 | None:intergenic | 55.0% | |
| TGGATGTTCCGGTGACCAGA+AGG | + | chr5.2:63369511-63369530 | None:intergenic | 55.0% | |
| ! | GTTGCTCCATGGCTTGCAGA+CGG | + | chr5.2:63369200-63369219 | None:intergenic | 55.0% |
| !! | GTTGATGATCCGCCGGTGAA+TGG | + | chr5.2:63365975-63365994 | None:intergenic | 55.0% |
| ACGGCGAGCCTCGATGAGAT+CGG | - | chr5.2:63365993-63366012 | MS.gene017232:CDS | 60.0% | |
| AGCCGGGCCTCCAAAACCTA+TGG | + | chr5.2:63367421-63367440 | None:intergenic | 60.0% | |
| AGGCGGAGAAGAATCCGGTG+AGG | - | chr5.2:63366096-63366115 | MS.gene017232:CDS | 60.0% | |
| ATCCGGTGAGGTCGAGGCAT+CGG | - | chr5.2:63366108-63366127 | MS.gene017232:CDS | 60.0% | |
| CAGGCCTCTTTCCCCTAAGG+AGG | - | chr5.2:63366818-63366837 | MS.gene017232:intron | 60.0% | |
| CCTTCCGATCCATTCACCGG+CGG | - | chr5.2:63365963-63365982 | MS.gene017232:CDS | 60.0% | |
| CGCAAGCAGCTCAACCAAGC+CGG | + | chr5.2:63367438-63367457 | None:intergenic | 60.0% | |
| CGCCGGTGAATGGATCGGAA+GGG | + | chr5.2:63365965-63365984 | None:intergenic | 60.0% | |
| CGGTGACCAGAAGGACCTTG+TGG | + | chr5.2:63369502-63369521 | None:intergenic | 60.0% | |
| CTCCGTTGTGGGAAAGGGGA+AGG | - | chr5.2:63367152-63367171 | MS.gene017232:intron | 60.0% | |
| CTTCCCCTTTCCCACAACGG+AGG | + | chr5.2:63367154-63367173 | None:intergenic | 60.0% | |
| GCAAGCAGCTCAACCAAGCC+GGG | + | chr5.2:63367437-63367456 | None:intergenic | 60.0% | |
| GCCGGGCCTCCAAAACCTAT+GGG | + | chr5.2:63367420-63367439 | None:intergenic | 60.0% | |
| GCCGGTGAATGGATCGGAAG+GGG | + | chr5.2:63365964-63365983 | None:intergenic | 60.0% | |
| TCCGCCTCATCGTTTCCACC+TGG | + | chr5.2:63366083-63366102 | None:intergenic | 60.0% | |
| !! | GATGGTGGAGCAGATCCAGG+TGG | - | chr5.2:63366065-63366084 | MS.gene017232:CDS | 60.0% |
| !! | GGAGATGGTGGAGCAGATCC+AGG | - | chr5.2:63366062-63366081 | MS.gene017232:CDS | 60.0% |
| !!! | GCCCATAGGTTTTGGAGGCC+CGG | - | chr5.2:63367416-63367435 | MS.gene017232:intron | 60.0% |
| !!! | TAGGTTTTGGAGGCCCGGCT+TGG | - | chr5.2:63367421-63367440 | MS.gene017232:intron | 60.0% |
| CCGCCGGTGAATGGATCGGA+AGG | + | chr5.2:63365966-63365985 | None:intergenic | 65.0% | |
| TGCCGATGCCTCGACCTCAC+CGG | + | chr5.2:63366113-63366132 | None:intergenic | 65.0% | |
| !! | GCTCGCCGTTGATGATCCGC+CGG | + | chr5.2:63365982-63366001 | None:intergenic | 65.0% |
| GAGCTGCTTGCGCACCCCCA+AGG | - | chr5.2:63367446-63367465 | MS.gene017232:intron | 70.0% | |
| TCACTCCCAGGCCCGGCCTT+GGG | + | chr5.2:63367465-63367484 | None:intergenic | 70.0% | |
| TGCTTGCGCACCCCCAAGGC+CGG | - | chr5.2:63367450-63367469 | MS.gene017232:intron | 70.0% | |
| TTCACTCCCAGGCCCGGCCT+TGG | + | chr5.2:63367466-63367485 | None:intergenic | 70.0% | |
| ACTCCCAGGCCCGGCCTTGG+GGG | + | chr5.2:63367463-63367482 | None:intergenic | 75.0% | |
| CACTCCCAGGCCCGGCCTTG+GGG | + | chr5.2:63367464-63367483 | None:intergenic | 75.0% | |
| GCTTGCGCACCCCCAAGGCC+GGG | - | chr5.2:63367451-63367470 | MS.gene017232:intron | 75.0% | |
| ! | GCACCCCCAAGGCCGGGCCT+GGG | - | chr5.2:63367457-63367476 | MS.gene017232:intron | 80.0% |
| ! | CGCACCCCCAAGGCCGGGCC+TGG | - | chr5.2:63367456-63367475 | MS.gene017232:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 63365948 | 63369729 | 63365948 | ID=MS.gene017232 |
| chr5.2 | mRNA | 63365948 | 63369729 | 63365948 | ID=MS.gene017232.t1;Parent=MS.gene017232 |
| chr5.2 | exon | 63369431 | 63369729 | 63369431 | ID=MS.gene017232.t1.exon1;Parent=MS.gene017232.t1 |
| chr5.2 | CDS | 63369431 | 63369729 | 63369431 | ID=cds.MS.gene017232.t1;Parent=MS.gene017232.t1 |
| chr5.2 | exon | 63366925 | 63367057 | 63366925 | ID=MS.gene017232.t1.exon2;Parent=MS.gene017232.t1 |
| chr5.2 | CDS | 63366925 | 63367057 | 63366925 | ID=cds.MS.gene017232.t1;Parent=MS.gene017232.t1 |
| chr5.2 | exon | 63366440 | 63366524 | 63366440 | ID=MS.gene017232.t1.exon3;Parent=MS.gene017232.t1 |
| chr5.2 | CDS | 63366440 | 63366524 | 63366440 | ID=cds.MS.gene017232.t1;Parent=MS.gene017232.t1 |
| chr5.2 | exon | 63365948 | 63366312 | 63365948 | ID=MS.gene017232.t1.exon4;Parent=MS.gene017232.t1 |
| chr5.2 | CDS | 63365948 | 63366312 | 63365948 | ID=cds.MS.gene017232.t1;Parent=MS.gene017232.t1 |
| Gene Sequence |
| Protein sequence |
