AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene017238

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene017238.t1 MTR_5g075410 95.929 786 32 0 1 786 1 786 0.0 1532
MS.gene017238.t1 MTR_3g467380 55.952 840 300 14 1 778 1 832 0.0 851
MS.gene017238.t1 MTR_4g028130 42.943 836 396 12 1 777 1 814 0.0 613
MS.gene017238.t1 MTR_4g028130 41.627 836 371 12 1 777 1 778 0.0 582
MS.gene017238.t1 MTR_4g028130 45.008 591 291 7 1 578 1 570 9.00e-160 479
MS.gene017238.t1 MTR_2g011940 41.241 548 222 12 283 774 305 808 3.03e-110 357
MS.gene017238.t1 MTR_2g011940 43.066 137 60 5 6 135 22 147 1.36e-23 107
MS.gene017238.t1 MTR_2g011940 47.138 297 117 4 283 578 314 571 8.57e-78 264
MS.gene017238.t1 MTR_2g011940 42.424 132 68 4 6 135 31 156 8.76e-24 107
MS.gene017238.t1 MTR_2g011940 47.138 297 117 4 283 578 314 571 1.65e-77 263
MS.gene017238.t1 MTR_2g011940 42.424 132 68 4 6 135 31 156 1.27e-23 107
MS.gene017238.t1 MTR_7g073240 49.189 185 89 3 254 434 52 235 6.44e-51 182
MS.gene017238.t1 MTR_7g073240 54.054 74 33 1 506 578 245 318 3.18e-16 81.6
MS.gene017238.t1 MTR_7g083700 48.235 85 43 1 321 404 126 210 1.27e-18 88.2
MS.gene017238.t1 MTR_7g059330 39.216 102 60 2 321 420 623 724 1.94e-15 81.3
MS.gene017238.t1 MTR_1g058350 37.037 135 64 6 302 422 54 181 5.72e-15 77.4
MS.gene017238.t1 MTR_5g053920 41.818 110 47 4 321 417 194 299 3.27e-14 75.5
MS.gene017238.t1 MTR_7g117455 38.462 91 51 3 321 408 117 205 2.28e-13 73.6
MS.gene017238.t1 MTR_7g105370 41.176 102 50 5 326 421 65 162 6.61e-13 70.9
MS.gene017238.t1 MTR_1g093600 31.429 140 76 5 321 442 191 328 1.92e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene017238.t1 AT4G32010 41.019 746 315 14 3 706 4 666 3.91e-175 523
MS.gene017238.t1 AT4G32010 40.800 750 315 15 3 706 4 670 2.94e-173 518
MS.gene017238.t1 AT2G30470 39.976 828 348 22 1 774 6 738 4.23e-172 515
MS.gene017238.t1 AT4G21550 53.247 154 67 3 287 437 291 442 8.75e-44 166
MS.gene017238.t1 AT4G21550 43.956 91 51 0 3 93 14 104 2.46e-21 99.0
MS.gene017238.t1 AT4G21550 53.247 154 67 3 287 437 291 442 2.35e-43 168
MS.gene017238.t1 AT4G21550 43.956 91 51 0 3 93 14 104 3.15e-21 99.8
MS.gene017238.t1 AT4G21550 40.336 119 56 4 657 774 551 655 2.61e-12 70.9
MS.gene017238.t1 AT4G21550 53.247 154 67 3 287 437 291 442 2.50e-43 166
MS.gene017238.t1 AT4G21550 44.944 89 49 0 5 93 16 104 4.19e-21 98.6
MS.gene017238.t1 AT3G26790 45.882 85 45 1 321 404 91 175 6.37e-18 85.9
MS.gene017238.t1 AT3G24650 41.176 102 58 2 321 420 571 672 7.12e-16 82.4
MS.gene017238.t1 AT1G28300 41.000 100 57 2 321 419 170 268 1.70e-15 79.3
MS.gene017238.t1 AT5G06250 35.135 148 73 6 310 439 37 179 2.47e-15 77.4
MS.gene017238.t1 AT5G06250 35.135 148 73 6 310 439 37 179 2.70e-15 77.8
MS.gene017238.t1 AT4G01500 43.820 89 47 2 321 408 35 121 3.07e-15 78.2
MS.gene017238.t1 AT5G06250 35.135 148 73 6 310 439 37 179 3.34e-15 77.4
MS.gene017238.t1 AT2G36080 39.815 108 56 4 321 421 37 142 3.69e-15 74.7
MS.gene017238.t1 AT2G36080 39.815 108 56 4 321 421 37 142 3.69e-15 74.7
MS.gene017238.t1 AT5G06250 35.135 148 73 6 310 439 37 179 3.92e-15 77.0
MS.gene017238.t1 AT5G06250 35.135 148 73 6 310 439 37 179 5.08e-15 76.6
MS.gene017238.t1 AT2G36080 39.815 108 56 4 321 421 37 142 6.50e-15 75.5
MS.gene017238.t1 AT2G36080 39.815 108 56 4 321 421 37 142 7.46e-15 75.5
MS.gene017238.t1 AT2G46870 40.659 91 49 3 321 408 34 122 7.85e-15 76.6
MS.gene017238.t1 AT1G13260 42.391 92 47 3 321 408 187 276 9.08e-15 77.0
MS.gene017238.t1 AT3G25730 38.318 107 57 4 321 420 182 286 3.22e-14 75.1
MS.gene017238.t1 AT3G61970 38.298 94 50 3 321 408 22 113 8.20e-14 73.6
MS.gene017238.t1 AT1G68840 41.935 93 47 3 321 408 187 277 2.24e-13 72.8
MS.gene017238.t1 AT1G68840 41.935 93 47 3 321 408 187 277 2.24e-13 72.8
MS.gene017238.t1 AT1G01030 40.860 93 46 4 321 408 55 143 4.87e-13 71.6
MS.gene017238.t1 AT1G01030 40.860 93 46 4 321 408 55 143 5.85e-13 71.6
MS.gene017238.t1 AT3G11580 36.752 117 55 5 321 421 28 141 6.61e-13 70.1
MS.gene017238.t1 AT3G11580 36.752 117 55 5 321 421 28 141 6.67e-12 66.6
MS.gene017238.t1 AT3G11580 36.752 117 55 5 321 421 28 141 6.67e-12 66.6
MS.gene017238.t1 AT3G11580 36.752 117 55 5 321 421 28 141 6.67e-12 66.6
MS.gene017238.t1 AT3G11580 36.752 117 55 5 321 421 28 141 1.28e-11 67.8

Find 197 sgRNAs with CRISPR-Local

Find 368 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTCAATTGTTACAATATT+TGG 0.086549 5.2:+63404592 None:intergenic
ATTCAAGAACACAAGCTTTC+AGG 0.213336 5.2:-63403658 MS.gene017238:CDS
ACTTAACACCTTCTCAAATA+AGG 0.237548 5.2:+63405599 None:intergenic
CCCGCATTTGTTGCAGAGTT+TGG 0.256841 5.2:+63408155 None:intergenic
TATGATTAATTTGATTGTTT+TGG 0.258238 5.2:+63403377 None:intergenic
CAACTGCTTCAGATTCTAAT+TGG 0.263143 5.2:+63403404 None:intergenic
TTCTAACGGCATTTCGATAA+AGG 0.267420 5.2:-63404953 MS.gene017238:CDS
ATCAGTTACTTTCTCGATAC+TGG 0.269074 5.2:-63406059 MS.gene017238:CDS
TTTACAGTTCCAAGATATAA+TGG 0.271409 5.2:-63405373 MS.gene017238:CDS
TATACCTCAGCACACGCTTT+TGG 0.274011 5.2:+63405540 None:intergenic
TGAAGACTTTCTTGTTCCTT+TGG 0.285526 5.2:+63404071 None:intergenic
AAGAAGAGGTCTCGCAATAT+TGG 0.296576 5.2:-63404718 MS.gene017238:CDS
TACATCCTACTGTTATTATT+AGG 0.308177 5.2:+63405318 None:intergenic
AACGGGGAACCTTACTTAAA+TGG 0.309832 5.2:-63404853 MS.gene017238:CDS
ACGGATGAGGGAAGCCTAAA+TGG 0.318513 5.2:-63403301 MS.gene017238:CDS
CAATTAAATGCTGGTGATAC+TGG 0.325898 5.2:-63405258 MS.gene017238:intron
AATGTAGTAAATGCTGTTAA+AGG 0.330641 5.2:+63406363 None:intergenic
CATCATATTCTTCAAATACT+TGG 0.347609 5.2:+63404569 None:intergenic
CTGCCGTTGGCCTCTGAGAT+TGG 0.350593 5.2:-63406249 MS.gene017238:CDS
TTACAGTTCCAAGATATAAT+GGG 0.352438 5.2:-63405372 MS.gene017238:CDS
CCTCAGAATTTGAACTCATT+AGG 0.359994 5.2:-63404910 MS.gene017238:CDS
AGGATACTGAAAATCATAAT+AGG 0.362554 5.2:-63406638 MS.gene017238:CDS
CCTCAAGCTGACCTCCATTT+AGG 0.367489 5.2:+63403287 None:intergenic
GCAAACATCTCAGTCTATAT+TGG 0.370039 5.2:-63406181 MS.gene017238:CDS
AAATTCCACCGTCATGAAAC+TGG 0.376289 5.2:-63407026 MS.gene017238:CDS
GCCTAGTGCTGCGGGACAAT+TGG 0.377079 5.2:-63403257 MS.gene017238:CDS
TTCAATCAATGAAAGGTAAC+GGG 0.377988 5.2:-63404870 MS.gene017238:CDS
CTTGTTCCTTTGGACCGAGC+TGG 0.382544 5.2:+63404081 None:intergenic
TGAGGTGCACCAGAAAAGTT+TGG 0.383323 5.2:+63404928 None:intergenic
TAATATGACTAGTCATGCTT+TGG 0.383891 5.2:+63403181 None:intergenic
GATGGCATGGTTTCATGTAT+TGG 0.390905 5.2:-63406462 MS.gene017238:CDS
AAAACCAGTGCCTCTCCATC+AGG 0.394979 5.2:-63404427 MS.gene017238:CDS
ACATTCAGAACATCTGCGTT+TGG 0.398523 5.2:-63404830 MS.gene017238:CDS
GAACATCTGCGTTTGGGTAA+TGG 0.398608 5.2:-63404823 MS.gene017238:CDS
CAATGGTCCATTGCAGCAAC+TGG 0.398704 5.2:-63404755 MS.gene017238:CDS
CAATTCTACACAACTGCATA+AGG 0.399404 5.2:+63406526 None:intergenic
CCGAGTGATGCAGGTCGAAT+TGG 0.400991 5.2:-63405576 MS.gene017238:CDS
CATTCAGAACATCTGCGTTT+GGG 0.404927 5.2:-63404829 MS.gene017238:CDS
AACAATGCAAGTGATCGATA+TGG 0.408713 5.2:-63406597 MS.gene017238:CDS
ATGAGTCTTGAAACAAATAA+AGG 0.410706 5.2:-63406132 MS.gene017238:CDS
AGTTTCCATTTCTTCATGAC+TGG 0.412100 5.2:+63403219 None:intergenic
TCATCCCAGTCATGAAGAAA+TGG 0.415741 5.2:-63403224 MS.gene017238:CDS
AGAAGAGGTCTCGCAATATT+GGG 0.416834 5.2:-63404717 MS.gene017238:CDS
TAAGCCCTCCCAGCTTTGTC+TGG 0.424644 5.2:-63406795 MS.gene017238:intron
TCGTTCGAGTACCTTGATTT+CGG 0.425356 5.2:-63406842 MS.gene017238:CDS
AGGCAAGGCAAGTGCATGTC+GGG 0.425926 5.2:+63403479 None:intergenic
ACTCGTTCCCCATTATATCT+TGG 0.426035 5.2:+63405364 None:intergenic
CTTAACACCTTCTCAAATAA+GGG 0.428464 5.2:+63405600 None:intergenic
GAATTGACACTTAACTTCTT+CGG 0.430100 5.2:+63406431 None:intergenic
TGGAAACTGATACATATAAC+AGG 0.432852 5.2:-63403204 MS.gene017238:CDS
TCTGAATGTCCATTTAAGTA+AGG 0.433067 5.2:+63404844 None:intergenic
TAACAGTAGGATGTATGTAT+TGG 0.435051 5.2:-63405310 MS.gene017238:CDS
CTTATGCAGTTGTGTAGAAT+TGG 0.437808 5.2:-63406525 MS.gene017238:CDS
TATTGTAAGGAAGGTTCAAC+TGG 0.440184 5.2:-63408219 MS.gene017238:CDS
CTCTTTGAGCTTGTGACCAA+CGG 0.442148 5.2:+63406484 None:intergenic
GGGTGGTCTTTGATCTCTGG+TGG 0.449691 5.2:-63408183 MS.gene017238:CDS
ACATTTAGTCGGATAGATCC+TGG 0.451349 5.2:-63405156 MS.gene017238:CDS
CCAGCTGACGACGACTCGTC+AGG 0.453820 5.2:+63403586 None:intergenic
CAAGAGCTGGAGAAATTGTC+GGG 0.454716 5.2:-63406021 MS.gene017238:CDS
AAAGGGTGGTCTTTGATCTC+TGG 0.456650 5.2:-63408186 MS.gene017238:CDS
ACAGAAATGTGAATTCTCAT+AGG 0.465032 5.2:+63407052 None:intergenic
CTGCATTGGCAAGAGCATCT+AGG 0.465149 5.2:+63403635 None:intergenic
ATGAATAATTATTGTAAGGA+AGG 0.465785 5.2:-63408228 MS.gene017238:CDS
AAGAAATTCTGTTCTGCCGT+TGG 0.473954 5.2:-63406262 MS.gene017238:CDS
CCTGACGAGTCGTCGTCAGC+TGG 0.478183 5.2:-63403586 MS.gene017238:CDS
CCAAACTCTGCAACAAATGC+GGG 0.482509 5.2:-63408155 MS.gene017238:intron
CATTCAACCACCAAGTGGAC+AGG 0.483217 5.2:-63403512 MS.gene017238:CDS
TGGGTAATGGAACTGCTGAT+TGG 0.484375 5.2:-63404810 MS.gene017238:CDS
TTTATTTGTTTCAAGACTCA+TGG 0.486601 5.2:+63406134 None:intergenic
CTATGGAATTGAGACTTACA+TGG 0.489129 5.2:-63404657 MS.gene017238:CDS
ACAATATTTGGCTTGACACT+AGG 0.490295 5.2:+63404604 None:intergenic
TTTAACAGCATTTACTACAT+TGG 0.491046 5.2:-63406361 MS.gene017238:CDS
GCATCGTAAGGCTCTTGAAC+CGG 0.491358 5.2:+63403440 None:intergenic
CAGTAGGATGTATGTATTGG+AGG 0.492186 5.2:-63405307 MS.gene017238:CDS
GCCAAATATTGTAACAATTG+AGG 0.493508 5.2:-63404593 MS.gene017238:CDS
CCTTCACATCAGCAGGTGGC+CGG 0.497637 5.2:+63406088 None:intergenic
CATTCATAGCGAAGATGCTA+TGG 0.498765 5.2:-63404674 MS.gene017238:CDS
GTGTATGAATAATTATTGTA+AGG 0.498958 5.2:-63408232 MS.gene017238:CDS
ATTGCCTAAAACTGCTGCAT+TGG 0.500146 5.2:+63403621 None:intergenic
AACTTATACCACCGAAATCA+AGG 0.500512 5.2:+63406831 None:intergenic
CCGGCCACCTGCTGATGTGA+AGG 0.500794 5.2:-63406088 MS.gene017238:CDS
GTGTTAAGTCCGAGTGATGC+AGG 0.501935 5.2:-63405585 MS.gene017238:CDS
TCAGCAGGTGGCCGGCGTGG+TGG 0.502029 5.2:+63406096 None:intergenic
GTTTCCATTTCTTCATGACT+GGG 0.503416 5.2:+63403220 None:intergenic
GGTGGTCTTTGATCTCTGGT+GGG 0.503585 5.2:-63408182 MS.gene017238:CDS
TCAAGAGCTGGAGAAATTGT+CGG 0.505861 5.2:-63406022 MS.gene017238:CDS
TTACCCTGATGGAGAGGCAC+TGG 0.511162 5.2:+63404423 None:intergenic
ATTATATCTTGGAACTGTAA+AGG 0.513021 5.2:+63405375 None:intergenic
TCAACTGGTGAATGGAAGAA+AGG 0.514062 5.2:-63408204 MS.gene017238:CDS
CGGCCACCTGCTGATGTGAA+GGG 0.515875 5.2:-63406087 MS.gene017238:CDS
TTAACCTTACCAGACAAAGC+TGG 0.516700 5.2:+63406786 None:intergenic
CTTCAATCAATGAAAGGTAA+CGG 0.516842 5.2:-63404871 MS.gene017238:CDS
ATTGGAGAAGGTAAACTTGA+GGG 0.521191 5.2:-63406231 MS.gene017238:CDS
AGCTCTTGATCAGTAATCCT+TGG 0.521679 5.2:+63406036 None:intergenic
GGTATATAATCTTACCCTGA+TGG 0.522702 5.2:+63404412 None:intergenic
AAACATCCGAGGCATCGTCC+TGG 0.526966 5.2:-63403553 MS.gene017238:CDS
AGGAAGGTTCAACTGGTGAA+TGG 0.526974 5.2:-63408212 MS.gene017238:CDS
CGATATGGTGAACATATTGA+TGG 0.528805 5.2:-63406582 MS.gene017238:CDS
TACAAGTCACTCAACGGATG+AGG 0.528930 5.2:-63403314 MS.gene017238:CDS
TTGTTACAGTAACATTTAGT+CGG 0.530093 5.2:-63405167 MS.gene017238:intron
TGAAACGCTTTCACTAAAGA+TGG 0.532158 5.2:-63406301 MS.gene017238:CDS
CCAATTCGACCTGCATCACT+CGG 0.532323 5.2:+63405576 None:intergenic
TTTCAGTTTCAGAGAAGAAG+AGG 0.532408 5.2:-63404732 MS.gene017238:CDS
AATCTTCTTCAATCAATGAA+AGG 0.533019 5.2:-63404877 MS.gene017238:CDS
ACTGAAACCAGTTGCTGCAA+TGG 0.534324 5.2:+63404748 None:intergenic
TTGGCTCAACTATCAAAGAC+TGG 0.539999 5.2:-63406162 MS.gene017238:CDS
ATCACCAGCATTTAATTGCA+AGG 0.546441 5.2:+63405263 None:intergenic
ATTAATCATATAGATGAAGC+AGG 0.546533 5.2:-63403364 MS.gene017238:CDS
CAGTCCTTGCAATTAAATGC+TGG 0.547662 5.2:-63405267 MS.gene017238:CDS
AGACTACTGGTGGAACAAGC+TGG 0.549005 5.2:-63406558 MS.gene017238:CDS
TAACCTTACCAGACAAAGCT+GGG 0.549034 5.2:+63406787 None:intergenic
GTGCATCCAGGACGATGCCT+CGG 0.549949 5.2:+63403547 None:intergenic
TACTTTCTCGATACTGGCCA+AGG 0.550936 5.2:-63406053 MS.gene017238:CDS
GTTGTTGAGCCTAGTGCTGC+GGG 0.553930 5.2:-63403265 MS.gene017238:CDS
CCGGCGCTTAAGAGTCTCAC+AGG 0.559293 5.2:+63403459 None:intergenic
CAACTGGTGAATGGAAGAAA+GGG 0.559758 5.2:-63408203 MS.gene017238:CDS
TGTAGTGCCCTTATTTGAGA+AGG 0.560033 5.2:-63405607 MS.gene017238:CDS
ATTGACTTCTGTTGTTACAC+AGG 0.561453 5.2:-63405103 MS.gene017238:intron
TCCAATTGTCCCGCAGCACT+AGG 0.562994 5.2:+63403256 None:intergenic
TCCATCCAGTTTCATGACGG+TGG 0.564496 5.2:+63407021 None:intergenic
AATTGCAAGGACTGTATGCA+AGG 0.565036 5.2:+63405276 None:intergenic
ACTATACATCCACTGTGGAT+AGG 0.566036 5.2:+63406875 None:intergenic
GGAAAATAATAGACCAACAT+GGG 0.566824 5.2:-63406340 MS.gene017238:CDS
TTATTTCATTTAGGAACCCC+CGG 0.568626 5.2:-63404464 MS.gene017238:intron
AAGGATTACTGATCAAGAGC+TGG 0.569540 5.2:-63406034 MS.gene017238:CDS
GCCAAACTCTGCAACAAATG+CGG 0.571705 5.2:-63408156 MS.gene017238:CDS
ATCAGACCAGCTCGGTCCAA+AGG 0.576061 5.2:-63404087 MS.gene017238:CDS
TCCTCCATCCAGTTTCATGA+CGG 0.576172 5.2:+63407018 None:intergenic
CACACGATACAAGTGCATCC+AGG 0.576195 5.2:+63403535 None:intergenic
TTCCCCTTCACATCAGCAGG+TGG 0.578031 5.2:+63406084 None:intergenic
AGTAGGATGTATGTATTGGA+GGG 0.578641 5.2:-63405306 MS.gene017238:CDS
TTCGAGTACCTTGATTTCGG+TGG 0.580235 5.2:-63406839 MS.gene017238:CDS
TAAGTGTCAATTCAACAAAG+AGG 0.581056 5.2:-63406421 MS.gene017238:CDS
CTTACCAGACAAAGCTGGGA+GGG 0.582135 5.2:+63406791 None:intergenic
ACATCAGCAGGTGGCCGGCG+TGG 0.583280 5.2:+63406093 None:intergenic
CCTGTGAGACTCTTAAGCGC+CGG 0.585911 5.2:-63403459 MS.gene017238:CDS
CATTTAGTCGGATAGATCCT+GGG 0.586278 5.2:-63405155 MS.gene017238:CDS
TTTGGCCTAATAATAACAGT+AGG 0.589295 5.2:-63405323 MS.gene017238:CDS
GCTTAAAACTGCACATAGTG+AGG 0.592237 5.2:-63404788 MS.gene017238:CDS
CCTAATGAGTTCAAATTCTG+AGG 0.592495 5.2:+63404910 None:intergenic
CTTTCACTAAAGATGGCTCT+AGG 0.593793 5.2:-63406294 MS.gene017238:CDS
ACAAGCTCAAAGAGATGGCA+TGG 0.595112 5.2:-63406475 MS.gene017238:CDS
GGTTGTTGAGCCTAGTGCTG+CGG 0.595679 5.2:-63403266 MS.gene017238:CDS
ACAAGTCACTCAACGGATGA+GGG 0.597566 5.2:-63403313 MS.gene017238:CDS
ATAGATGAAGCAGGTACTAG+TGG 0.598221 5.2:-63403355 MS.gene017238:CDS
CTGGTGGAACAAGCTGGCAA+AGG 0.598804 5.2:-63406552 MS.gene017238:CDS
TATTGATGGTAGACTACTGG+TGG 0.600333 5.2:-63406568 MS.gene017238:CDS
GGCCACCTGCTGATGTGAAG+GGG 0.601780 5.2:-63406086 MS.gene017238:CDS
TGGTCACAAGCTCAAAGAGA+TGG 0.603653 5.2:-63406480 MS.gene017238:CDS
CAGGCAAGGCAAGTGCATGT+CGG 0.603970 5.2:+63403478 None:intergenic
ACATATTGATGGTAGACTAC+TGG 0.604398 5.2:-63406571 MS.gene017238:CDS
TCCACCGTCATGAAACTGGA+TGG 0.604497 5.2:-63407022 MS.gene017238:CDS
ATTGCAAGGACTGTATGCAA+GGG 0.607548 5.2:+63405277 None:intergenic
ATATTGGGACGAAAACTAAG+AGG 0.609627 5.2:-63404702 MS.gene017238:CDS
AAGATATAATGGGGAACGAG+TGG 0.614024 5.2:-63405362 MS.gene017238:CDS
GCTTAAGAGTCTCACAGGCA+AGG 0.617723 5.2:+63403464 None:intergenic
TTGGCCTCTGAGATTGGAGA+AGG 0.619422 5.2:-63406243 MS.gene017238:CDS
CCTAAATGGAGGTCAGCTTG+AGG 0.620594 5.2:-63403287 MS.gene017238:CDS
TTGTGTAGAATTGGTGAAGT+CGG 0.620883 5.2:-63406516 MS.gene017238:CDS
TACAGTTCCAAGATATAATG+GGG 0.621280 5.2:-63405371 MS.gene017238:CDS
AAACCAGTGCCTCTCCATCA+GGG 0.622368 5.2:-63404426 MS.gene017238:intron
TCTACATCTTCTCATTCTAA+CGG 0.622522 5.2:-63404967 MS.gene017238:CDS
ACAAGATACAAGTCACTCAA+CGG 0.624174 5.2:-63403320 MS.gene017238:CDS
CAGCTGACGACGACTCGTCA+GGG 0.628337 5.2:+63403587 None:intergenic
TGATCTCTCATCCACCACGC+CGG 0.630532 5.2:-63406107 MS.gene017238:CDS
ATAATCTTACCCTGATGGAG+AGG 0.631070 5.2:+63404417 None:intergenic
GATGAAGCAGGTACTAGTGG+TGG 0.639251 5.2:-63403352 MS.gene017238:CDS
ATTCAACCACCAAGTGGACA+GGG 0.641900 5.2:-63403511 MS.gene017238:CDS
AAGTCGGTGAATCAAGCCGT+TGG 0.642223 5.2:-63406500 MS.gene017238:CDS
GGTTCTGCATCAGACCAGCT+CGG 0.642711 5.2:-63404095 MS.gene017238:CDS
TGGAAAATAATAGACCAACA+TGG 0.644227 5.2:-63406341 MS.gene017238:CDS
CTGGTGAATGGAAGAAAGGG+TGG 0.646177 5.2:-63408200 MS.gene017238:CDS
TTTGGCTTGACACTAGGCGG+CGG 0.654279 5.2:+63404610 None:intergenic
GTGTGCATTCAACCACCAAG+TGG 0.657426 5.2:-63403517 MS.gene017238:CDS
CCTTCTGATTGCAAAATACG+AGG 0.659510 5.2:+63405402 None:intergenic
TCTCCAATCTCAGAGGCCAA+CGG 0.662250 5.2:+63406246 None:intergenic
TTGCAAGGACTGTATGCAAG+GGG 0.665717 5.2:+63405278 None:intergenic
ATATTTGGCTTGACACTAGG+CGG 0.666538 5.2:+63404607 None:intergenic
GTTAGAATGAGAAGATGTAG+AGG 0.666828 5.2:+63404969 None:intergenic
TAAAACTGCACATAGTGAGG+AGG 0.667263 5.2:-63404785 MS.gene017238:CDS
GAAATGCAGCAATTGCAGCA+AGG 0.667427 5.2:-63406997 MS.gene017238:intron
GATTGGAGAAGGTAAACTTG+AGG 0.667659 5.2:-63406232 MS.gene017238:CDS
AAGAGCTGGAGAAATTGTCG+GGG 0.668493 5.2:-63406020 MS.gene017238:CDS
TTAATCTTTCCGAAAACCGG+GGG 0.672825 5.2:+63404448 None:intergenic
ACCGTCATGAAACTGGATGG+AGG 0.674066 5.2:-63407019 MS.gene017238:CDS
TTTAATCTTTCCGAAAACCG+GGG 0.679300 5.2:+63404447 None:intergenic
AGTGAGGAGGAAATGAACAA+TGG 0.681817 5.2:-63404772 MS.gene017238:CDS
TATGGAATTGAGACTTACAT+GGG 0.685466 5.2:-63404656 MS.gene017238:CDS
AAGCTGGGAGGGCTTAACAC+AGG 0.686823 5.2:+63406802 None:intergenic
TTTACCTTCTCCAATCTCAG+AGG 0.691488 5.2:+63406239 None:intergenic
GAATCACCACAAAACATCCG+AGG 0.699635 5.2:-63403564 MS.gene017238:CDS
TCAATCAATGAAAGGTAACG+GGG 0.707345 5.2:-63404869 MS.gene017238:CDS
CCTTACCAGACAAAGCTGGG+AGG 0.709735 5.2:+63406790 None:intergenic
GATGAGGGAAGCCTAAATGG+AGG 0.710836 5.2:-63403298 MS.gene017238:CDS
AGAGCTGGAGAAATTGTCGG+GGG 0.721199 5.2:-63406019 MS.gene017238:CDS
GCTCCCAAAAGCGTGTGCTG+AGG 0.736724 5.2:-63405544 MS.gene017238:intron
TTGATACTATACATCCACTG+TGG 0.738079 5.2:+63406870 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATATATTTCAATATCAA+AGG + chr5.2:63404523-63404542 None:intergenic 10.0%
!!! ACATATATCTAAATATTTTT+GGG - chr5.2:63407540-63407559 MS.gene017238:intron 10.0%
!!! GTTTTTTATTTATTTCATTT+AGG - chr5.2:63406962-63406981 MS.gene017238:intron 10.0%
!!! TACATATATCTAAATATTTT+TGG - chr5.2:63407539-63407558 MS.gene017238:intron 10.0%
!! AAATCCCAAAATTATTAATT+TGG + chr5.2:63403419-63403438 None:intergenic 15.0%
!! AGAATCAAATAACAAAATTT+CGG + chr5.2:63404709-63404728 None:intergenic 15.0%
!! ATTATTCTTATTATGTACTA+TGG - chr5.2:63407302-63407321 MS.gene017238:intron 15.0%
!!! AATGATATATTTTGGATTTT+TGG - chr5.2:63406905-63406924 MS.gene017238:intron 15.0%
!!! ATTTCACAATGTTATAATTT+TGG - chr5.2:63403364-63403383 MS.gene017238:CDS 15.0%
!!! CAATTTTTTTTTAGAAAACT+CGG + chr5.2:63404081-63404100 None:intergenic 15.0%
!!! TATGATTAATTTGATTGTTT+TGG + chr5.2:63408061-63408080 None:intergenic 15.0%
!!! TGATCCAAATTAATAATTTT+GGG - chr5.2:63403412-63403431 MS.gene017238:CDS 15.0%
!!! TTGATCCAAATTAATAATTT+TGG - chr5.2:63403411-63403430 MS.gene017238:CDS 15.0%
!!! TTTCACAATGTTATAATTTT+GGG - chr5.2:63403365-63403384 MS.gene017238:CDS 15.0%
!! AAACTGAGATAATAATGTTA+AGG + chr5.2:63405799-63405818 None:intergenic 20.0%
!! AAATCAAAATATGAAATGCT+CGG - chr5.2:63403625-63403644 MS.gene017238:CDS 20.0%
!! AACTGAGATAATAATGTTAA+GGG + chr5.2:63405798-63405817 None:intergenic 20.0%
!! AATACAACTTTAAATATGAG+TGG + chr5.2:63403596-63403615 None:intergenic 20.0%
!! ATAAATAAAAAACATAAGCC+AGG + chr5.2:63406955-63406974 None:intergenic 20.0%
!! ATAATAGACCAAAATACTAA+GGG + chr5.2:63405734-63405753 None:intergenic 20.0%
!! ATGAATAATTATTGTAAGGA+AGG - chr5.2:63403207-63403226 MS.gene017238:CDS 20.0%
!! GAATCAAATAACAAAATTTC+GGG + chr5.2:63404708-63404727 None:intergenic 20.0%
!! GTGTATGAATAATTATTGTA+AGG - chr5.2:63403203-63403222 MS.gene017238:CDS 20.0%
!! TAAAAAAAAAAAACGATAGC+AGG + chr5.2:63407411-63407430 None:intergenic 20.0%
!! TAATTAAGTACTAGTTATCA+AGG + chr5.2:63407679-63407698 None:intergenic 20.0%
!! TATAATAGACCAAAATACTA+AGG + chr5.2:63405735-63405754 None:intergenic 20.0%
!! TCTTAAGTATAAGTAAAAGT+TGG + chr5.2:63403761-63403780 None:intergenic 20.0%
!! TTCAAATCAAACATATGTTT+AGG - chr5.2:63404248-63404267 MS.gene017238:intron 20.0%
!!! AAACTGTGAATGATATATTT+TGG - chr5.2:63406897-63406916 MS.gene017238:intron 20.0%
!!! AATTTCTATTTGGTTTTAGA+AGG - chr5.2:63406307-63406326 MS.gene017238:CDS 20.0%
!!! ACTTTTACTTATACTTAAGA+CGG - chr5.2:63403761-63403780 MS.gene017238:intron 20.0%
!!! ATTAATAATTTTGGGATTTG+AGG - chr5.2:63403420-63403439 MS.gene017238:CDS 20.0%
!!! CGAGTTTTCTAAAAAAAAAT+TGG - chr5.2:63404079-63404098 MS.gene017238:CDS 20.0%
!!! TATCATTGAATGTTTTTCTA+TGG - chr5.2:63404770-63404789 MS.gene017238:CDS 20.0%
!!! TTCACAATGTTATAATTTTG+GGG - chr5.2:63403366-63403385 MS.gene017238:CDS 20.0%
! AATCTTCTTCAATCAATGAA+AGG - chr5.2:63406558-63406577 MS.gene017238:CDS 25.0%
! AATGTAGTAAATGCTGTTAA+AGG + chr5.2:63405075-63405094 None:intergenic 25.0%
! ACATTAAGATAATCATTTGC+AGG + chr5.2:63403863-63403882 None:intergenic 25.0%
! AGGATACTGAAAATCATAAT+AGG - chr5.2:63404797-63404816 MS.gene017238:CDS 25.0%
! ATGAGTCTTGAAACAAATAA+AGG - chr5.2:63405303-63405322 MS.gene017238:CDS 25.0%
! ATTAATCATATAGATGAAGC+AGG - chr5.2:63408071-63408090 MS.gene017238:intron 25.0%
! ATTATATCTTGGAACTGTAA+AGG + chr5.2:63406063-63406082 None:intergenic 25.0%
! CAAATTGGTATATGAATTTC+AGG - chr5.2:63406002-63406021 MS.gene017238:intron 25.0%
! CATCATATTCTTCAAATACT+TGG + chr5.2:63406869-63406888 None:intergenic 25.0%
! CTATCATTGTACATATTTGA+AGG + chr5.2:63407099-63407118 None:intergenic 25.0%
! GAATCTGTAAATTTATGTCT+CGG + chr5.2:63404746-63404765 None:intergenic 25.0%
! TACATCCTACTGTTATTATT+AGG + chr5.2:63406120-63406139 None:intergenic 25.0%
! TAGTCCTATTTCAAATGTTT+GGG - chr5.2:63407215-63407234 MS.gene017238:intron 25.0%
! TCCTCAATTGTTACAATATT+TGG + chr5.2:63406846-63406865 None:intergenic 25.0%
! TTAAAGGGTTATCTTTAAAC+AGG - chr5.2:63406440-63406459 MS.gene017238:CDS 25.0%
! TTACAGTTCCAAGATATAAT+GGG - chr5.2:63406063-63406082 MS.gene017238:CDS 25.0%
! TTAGTCCTATTTCAAATGTT+TGG - chr5.2:63407214-63407233 MS.gene017238:intron 25.0%
! TTGTTACAGTAACATTTAGT+CGG - chr5.2:63406268-63406287 MS.gene017238:CDS 25.0%
! TTTAACAGCATTTACTACAT+TGG - chr5.2:63405074-63405093 MS.gene017238:intron 25.0%
! TTTACAGTTCCAAGATATAA+TGG - chr5.2:63406062-63406081 MS.gene017238:CDS 25.0%
! TTTATTTGTTTCAAGACTCA+TGG + chr5.2:63405304-63405323 None:intergenic 25.0%
!! ATTATGTACTATGGTTTTTC+AGG - chr5.2:63407311-63407330 MS.gene017238:intron 25.0%
!! CTTTTACTTATACTTAAGAC+GGG - chr5.2:63403762-63403781 MS.gene017238:intron 25.0%
!!! CTTTTGCTTATATTTAAGAC+CGG + chr5.2:63403691-63403710 None:intergenic 25.0%
!!! TCAAAGAAAGTTGATGTATT+TGG + chr5.2:63403738-63403757 None:intergenic 25.0%
AAAACCCCAGAAAAGAAAAA+GGG + chr5.2:63403503-63403522 None:intergenic 30.0%
AAATGTAGACTGAACAGAAA+GGG + chr5.2:63403814-63403833 None:intergenic 30.0%
AAATTAAGAATCCGTAAGCA+GGG + chr5.2:63404339-63404358 None:intergenic 30.0%
AAGTCCATGTTGCAATTTAT+AGG - chr5.2:63404203-63404222 MS.gene017238:intron 30.0%
AATAAGCTGAAAACAACTCA+TGG - chr5.2:63405617-63405636 MS.gene017238:CDS 30.0%
ACAGAAATGTGAATTCTCAT+AGG + chr5.2:63404386-63404405 None:intergenic 30.0%
ACTTAACACCTTCTCAAATA+AGG + chr5.2:63405839-63405858 None:intergenic 30.0%
AGTCCATGTTGCAATTTATA+GGG - chr5.2:63404204-63404223 MS.gene017238:intron 30.0%
AGTCTTCAAAGAACCAAAAA+AGG - chr5.2:63407379-63407398 MS.gene017238:intron 30.0%
AGTTTATCGAAACAGCTTAA+CGG + chr5.2:63405648-63405667 None:intergenic 30.0%
ATCTTCAAATTTCTGTTACC+TGG - chr5.2:63406934-63406953 MS.gene017238:intron 30.0%
CAAACAGAACCTGAATATAA+AGG + chr5.2:63405447-63405466 None:intergenic 30.0%
CCTGGGAAAAAATTTCTATT+TGG - chr5.2:63406297-63406316 MS.gene017238:CDS 30.0%
CTTAACACCTTCTCAAATAA+GGG + chr5.2:63405838-63405857 None:intergenic 30.0%
CTTATTTCGATAAGTTCTCT+AGG + chr5.2:63405603-63405622 None:intergenic 30.0%
CTTCAATCAATGAAAGGTAA+CGG - chr5.2:63406564-63406583 MS.gene017238:CDS 30.0%
GAATCAACTTTGCATGTTTA+AGG + chr5.2:63405764-63405783 None:intergenic 30.0%
GAATTGACACTTAACTTCTT+CGG + chr5.2:63405007-63405026 None:intergenic 30.0%
GCCAAATATTGTAACAATTG+AGG - chr5.2:63406842-63406861 MS.gene017238:CDS 30.0%
GGAAAATAATAGACCAACAT+GGG - chr5.2:63405095-63405114 MS.gene017238:intron 30.0%
TAAATTAAGAATCCGTAAGC+AGG + chr5.2:63404340-63404359 None:intergenic 30.0%
TAACAGTAGGATGTATGTAT+TGG - chr5.2:63406125-63406144 MS.gene017238:CDS 30.0%
TAAGTGTCAATTCAACAAAG+AGG - chr5.2:63405014-63405033 MS.gene017238:intron 30.0%
TACAGTTCCAAGATATAATG+GGG - chr5.2:63406064-63406083 MS.gene017238:CDS 30.0%
TATGGAATTGAGACTTACAT+GGG - chr5.2:63406779-63406798 MS.gene017238:intron 30.0%
TCTACATCTTCTCATTCTAA+CGG - chr5.2:63406468-63406487 MS.gene017238:CDS 30.0%
TCTGAATGTCCATTTAAGTA+AGG + chr5.2:63406594-63406613 None:intergenic 30.0%
TCTGTAGTAGTCATGTTTAT+CGG - chr5.2:63407442-63407461 MS.gene017238:intron 30.0%
TGGAAAATAATAGACCAACA+TGG - chr5.2:63405094-63405113 MS.gene017238:intron 30.0%
TGGAAACTGATACATATAAC+AGG - chr5.2:63408231-63408250 MS.gene017238:CDS 30.0%
TGTTCTTATGAGTTCATGTT+GGG - chr5.2:63403453-63403472 MS.gene017238:CDS 30.0%
TTACCCTATAAATTGCAACA+TGG + chr5.2:63404210-63404229 None:intergenic 30.0%
TTCAATCAATGAAAGGTAAC+GGG - chr5.2:63406565-63406584 MS.gene017238:CDS 30.0%
TTTGGCCTAATAATAACAGT+AGG - chr5.2:63406112-63406131 MS.gene017238:CDS 30.0%
! ATAAAGGATCCAAACTTTTC+TGG - chr5.2:63406498-63406517 MS.gene017238:CDS 30.0%
! CATCTTCTCATTTTCAACAA+GGG - chr5.2:63405232-63405251 MS.gene017238:intron 30.0%
! CTTTATATTCAGGTTCTGTT+TGG - chr5.2:63405445-63405464 MS.gene017238:intron 30.0%
! GAATGTTTTTCTATGGATAC+AGG - chr5.2:63404777-63404796 MS.gene017238:CDS 30.0%
! TGATCATCATTTTCATCCAA+AGG + chr5.2:63403571-63403590 None:intergenic 30.0%
! TTCAACCCTTTTTCTTTTCT+GGG - chr5.2:63403495-63403514 MS.gene017238:CDS 30.0%
! TTTCAACCCTTTTTCTTTTC+TGG - chr5.2:63403494-63403513 MS.gene017238:CDS 30.0%
! TTTTAATCTTTCCGAAAACC+GGG + chr5.2:63406992-63407011 None:intergenic 30.0%
!! AGTGCTTTGGAAATAACTTT+AGG + chr5.2:63407648-63407667 None:intergenic 30.0%
!! GTTTTAATCTTTCCGAAAAC+CGG + chr5.2:63406993-63407012 None:intergenic 30.0%
!!! CCAAATAGAAATTTTTTCCC+AGG + chr5.2:63406300-63406319 None:intergenic 30.0%
!!! CTAAATATTTTTGGGATGTG+CGG - chr5.2:63407548-63407567 MS.gene017238:intron 30.0%
AACAATGCAAGTGATCGATA+TGG - chr5.2:63404838-63404857 MS.gene017238:CDS 35.0%
AACTTATACCACCGAAATCA+AGG + chr5.2:63404607-63404626 None:intergenic 35.0%
AATTAAGAATCCGTAAGCAG+GGG + chr5.2:63404338-63404357 None:intergenic 35.0%
ACAAGATACAAGTCACTCAA+CGG - chr5.2:63408115-63408134 MS.gene017238:intron 35.0%
AGCAAGCACAGAATTTAACA+AGG + chr5.2:63407597-63407616 None:intergenic 35.0%
AGTAGGATGTATGTATTGGA+GGG - chr5.2:63406129-63406148 MS.gene017238:CDS 35.0%
AGTTTCCATTTCTTCATGAC+TGG + chr5.2:63408219-63408238 None:intergenic 35.0%
ATATTGGGACGAAAACTAAG+AGG - chr5.2:63406733-63406752 MS.gene017238:intron 35.0%
ATCACCAGCATTTAATTGCA+AGG + chr5.2:63406175-63406194 None:intergenic 35.0%
ATTCAAGAACACAAGCTTTC+AGG - chr5.2:63407777-63407796 MS.gene017238:intron 35.0%
ATTGGAGAAGGTAAACTTGA+GGG - chr5.2:63405204-63405223 MS.gene017238:intron 35.0%
CAAATGTAGACTGAACAGAA+AGG + chr5.2:63403815-63403834 None:intergenic 35.0%
CAACTGCTTCAGATTCTAAT+TGG + chr5.2:63408034-63408053 None:intergenic 35.0%
CAATTAAATGCTGGTGATAC+TGG - chr5.2:63406177-63406196 MS.gene017238:CDS 35.0%
CAATTCTACACAACTGCATA+AGG + chr5.2:63404912-63404931 None:intergenic 35.0%
CCTAATGAGTTCAAATTCTG+AGG + chr5.2:63406528-63406547 None:intergenic 35.0%
CCTCAGAATTTGAACTCATT+AGG - chr5.2:63406525-63406544 MS.gene017238:CDS 35.0%
CGATATGGTGAACATATTGA+TGG - chr5.2:63404853-63404872 MS.gene017238:CDS 35.0%
CTATGGAATTGAGACTTACA+TGG - chr5.2:63406778-63406797 MS.gene017238:intron 35.0%
CTTATGCAGTTGTGTAGAAT+TGG - chr5.2:63404910-63404929 MS.gene017238:CDS 35.0%
GAAAACCCCAGAAAAGAAAA+AGG + chr5.2:63403504-63403523 None:intergenic 35.0%
GCAAACATCTCAGTCTATAT+TGG - chr5.2:63405254-63405273 MS.gene017238:intron 35.0%
GGGTACATTACTTAAACTGA+TGG + chr5.2:63403794-63403813 None:intergenic 35.0%
GGTATATAATCTTACCCTGA+TGG + chr5.2:63407026-63407045 None:intergenic 35.0%
GTGTTCTTATGAGTTCATGT+TGG - chr5.2:63403452-63403471 MS.gene017238:CDS 35.0%
GTTAGAATGAGAAGATGTAG+AGG + chr5.2:63406469-63406488 None:intergenic 35.0%
GTTTATCGGAATAGAGTTAG+AGG - chr5.2:63407456-63407475 MS.gene017238:intron 35.0%
GTTTCCATTTCTTCATGACT+GGG + chr5.2:63408218-63408237 None:intergenic 35.0%
TACACATTTCCCTGTAATTG+CGG - chr5.2:63405970-63405989 MS.gene017238:intron 35.0%
TATCAAAGGAGAGAAAGACA+AGG + chr5.2:63404509-63404528 None:intergenic 35.0%
TATCTTAATGTGTACCCACT+TGG - chr5.2:63403872-63403891 MS.gene017238:intron 35.0%
TATTGTAAGGAAGGTTCAAC+TGG - chr5.2:63403216-63403235 MS.gene017238:CDS 35.0%
TCAATCAATGAAAGGTAACG+GGG - chr5.2:63406566-63406585 MS.gene017238:CDS 35.0%
TGAAACGCTTTCACTAAAGA+TGG - chr5.2:63405134-63405153 MS.gene017238:CDS 35.0%
TGAAGACTTTCTTGTTCCTT+TGG + chr5.2:63407367-63407386 None:intergenic 35.0%
TTATTTCATTTAGGAACCCC+CGG - chr5.2:63406971-63406990 MS.gene017238:intron 35.0%
TTCTAACGGCATTTCGATAA+AGG - chr5.2:63406482-63406501 MS.gene017238:CDS 35.0%
TTGATACTATACATCCACTG+TGG + chr5.2:63404568-63404587 None:intergenic 35.0%
TTGTGTAGAATTGGTGAAGT+CGG - chr5.2:63404919-63404938 MS.gene017238:CDS 35.0%
TTTAATCTTTCCGAAAACCG+GGG + chr5.2:63406991-63407010 None:intergenic 35.0%
TTTATGTCTCGGTATCACAA+TGG + chr5.2:63404735-63404754 None:intergenic 35.0%
TTTCAGTTTCAGAGAAGAAG+AGG - chr5.2:63406703-63406722 MS.gene017238:intron 35.0%
! ACATATTGATGGTAGACTAC+TGG - chr5.2:63404864-63404883 MS.gene017238:CDS 35.0%
! ATACTTTTAGTCTCCCATGT+TGG + chr5.2:63405111-63405130 None:intergenic 35.0%
! ATCAGTTACTTTCTCGATAC+TGG - chr5.2:63405376-63405395 MS.gene017238:CDS 35.0%
! ATTGACTTCTGTTGTTACAC+AGG - chr5.2:63406332-63406351 MS.gene017238:CDS 35.0%
! CACTTAACTTCTTCGGTTTT+TGG + chr5.2:63405000-63405019 None:intergenic 35.0%
! GCATCCCAAACATTTGAAAT+AGG + chr5.2:63407222-63407241 None:intergenic 35.0%
! GCATCTTCTCATTTTCAACA+AGG - chr5.2:63405231-63405250 MS.gene017238:intron 35.0%
! GGACTTTTCAGTTCAGATTT+TGG - chr5.2:63406094-63406113 MS.gene017238:CDS 35.0%
! TCAACCCTTTTTCTTTTCTG+GGG - chr5.2:63403496-63403515 MS.gene017238:CDS 35.0%
! TCGATCACTTGCATTGTTTT+TGG + chr5.2:63404836-63404855 None:intergenic 35.0%
! TTTTCTTCTTACGCATCGTA+AGG + chr5.2:63408010-63408029 None:intergenic 35.0%
!! ACAATATTTGGCTTGACACT+AGG + chr5.2:63406834-63406853 None:intergenic 35.0%
!!! CATTGTTTTTGGTCGATTGA+GGG + chr5.2:63404825-63404844 None:intergenic 35.0%
!!! CTTGGTTTTGTTAGTAAGTC+AGG - chr5.2:63404168-63404187 MS.gene017238:intron 35.0%
!!! TCGCTTCTTTTTAGAATCTG+CGG + chr5.2:63407733-63407752 None:intergenic 35.0%
!!! TTTCTTTTCTGGGGTTTTCA+GGG - chr5.2:63403505-63403524 MS.gene017238:CDS 35.0%
!!! TTTTCTTTTCTGGGGTTTTC+AGG - chr5.2:63403504-63403523 MS.gene017238:CDS 35.0%
AAATTCCACCGTCATGAAAC+TGG - chr5.2:63404409-63404428 MS.gene017238:intron 40.0%
AACGGGGAACCTTACTTAAA+TGG - chr5.2:63406582-63406601 MS.gene017238:CDS 40.0%
AAGAAATTCTGTTCTGCCGT+TGG - chr5.2:63405173-63405192 MS.gene017238:intron 40.0%
AAGAAGAGGTCTCGCAATAT+TGG - chr5.2:63406717-63406736 MS.gene017238:intron 40.0%
AAGGATTACTGATCAAGAGC+TGG - chr5.2:63405401-63405420 MS.gene017238:CDS 40.0%
AATTGCAAGGACTGTATGCA+AGG + chr5.2:63406162-63406181 None:intergenic 40.0%
ACATTCAGAACATCTGCGTT+TGG - chr5.2:63406605-63406624 MS.gene017238:CDS 40.0%
ACATTTAGTCGGATAGATCC+TGG - chr5.2:63406279-63406298 MS.gene017238:CDS 40.0%
ACGCATAAATGCACAGTTAC+AGG + chr5.2:63403535-63403554 None:intergenic 40.0%
ACTATACATCCACTGTGGAT+AGG + chr5.2:63404563-63404582 None:intergenic 40.0%
ACTCGTTCCCCATTATATCT+TGG + chr5.2:63406074-63406093 None:intergenic 40.0%
AGAAACCTCAGAACAAAAGC+AGG + chr5.2:63404150-63404169 None:intergenic 40.0%
AGAAGAGGTCTCGCAATATT+GGG - chr5.2:63406718-63406737 MS.gene017238:intron 40.0%
AGCTCTTGATCAGTAATCCT+TGG + chr5.2:63405402-63405421 None:intergenic 40.0%
AGTCCTGCTCTGACTTTAAA+TGG - chr5.2:63403995-63404014 MS.gene017238:intron 40.0%
AGTGAGGAGGAAATGAACAA+TGG - chr5.2:63406663-63406682 MS.gene017238:intron 40.0%
ATAATCTTACCCTGATGGAG+AGG + chr5.2:63407021-63407040 None:intergenic 40.0%
ATAGATGAAGCAGGTACTAG+TGG - chr5.2:63408080-63408099 MS.gene017238:intron 40.0%
ATTGCAAGGACTGTATGCAA+GGG + chr5.2:63406161-63406180 None:intergenic 40.0%
ATTGCCTAAAACTGCTGCAT+TGG + chr5.2:63407817-63407836 None:intergenic 40.0%
CAACTGGTGAATGGAAGAAA+GGG - chr5.2:63403232-63403251 MS.gene017238:CDS 40.0%
CAGTAGGATGTATGTATTGG+AGG - chr5.2:63406128-63406147 MS.gene017238:CDS 40.0%
CAGTCCTTGCAATTAAATGC+TGG - chr5.2:63406168-63406187 MS.gene017238:CDS 40.0%
CATTCAGAACATCTGCGTTT+GGG - chr5.2:63406606-63406625 MS.gene017238:CDS 40.0%
CATTCATAGCGAAGATGCTA+TGG - chr5.2:63406761-63406780 MS.gene017238:intron 40.0%
CATTTAGTCGGATAGATCCT+GGG - chr5.2:63406280-63406299 MS.gene017238:CDS 40.0%
CCTTCTGATTGCAAAATACG+AGG + chr5.2:63406036-63406055 None:intergenic 40.0%
CTTACTTTGTGCTCCTCTAA+AGG - chr5.2:63403921-63403940 MS.gene017238:intron 40.0%
CTTTCACTAAAGATGGCTCT+AGG - chr5.2:63405141-63405160 MS.gene017238:CDS 40.0%
GATGGCATGGTTTCATGTAT+TGG - chr5.2:63404973-63404992 MS.gene017238:CDS 40.0%
GATTGGAGAAGGTAAACTTG+AGG - chr5.2:63405203-63405222 MS.gene017238:intron 40.0%
GCAGACAGGTCAACATTATT+CGG - chr5.2:63407240-63407259 MS.gene017238:intron 40.0%
GCTTAAAACTGCACATAGTG+AGG - chr5.2:63406647-63406666 MS.gene017238:intron 40.0%
GTCCTGCTCTGACTTTAAAT+GGG - chr5.2:63403996-63404015 MS.gene017238:intron 40.0%
TAAAACTGCACATAGTGAGG+AGG - chr5.2:63406650-63406669 MS.gene017238:intron 40.0%
TAACCTTACCAGACAAAGCT+GGG + chr5.2:63404651-63404670 None:intergenic 40.0%
TCAACTGGTGAATGGAAGAA+AGG - chr5.2:63403231-63403250 MS.gene017238:CDS 40.0%
TCAAGAGCTGGAGAAATTGT+CGG - chr5.2:63405413-63405432 MS.gene017238:CDS 40.0%
TCATACATGCCGCAATTACA+GGG + chr5.2:63405982-63406001 None:intergenic 40.0%
TCATCCCAGTCATGAAGAAA+TGG - chr5.2:63408211-63408230 MS.gene017238:CDS 40.0%
TCGTTCGAGTACCTTGATTT+CGG - chr5.2:63404593-63404612 MS.gene017238:CDS 40.0%
TGTCAACGAATCTCAGTTCT+TGG + chr5.2:63403658-63403677 None:intergenic 40.0%
TTAACCTTACCAGACAAAGC+TGG + chr5.2:63404652-63404671 None:intergenic 40.0%
TTAATCTTTCCGAAAACCGG+GGG + chr5.2:63406990-63407009 None:intergenic 40.0%
TTGCGGCATGTATGACAAAT+TGG - chr5.2:63405987-63406006 MS.gene017238:intron 40.0%
TTGGCTCAACTATCAAAGAC+TGG - chr5.2:63405273-63405292 MS.gene017238:CDS 40.0%
TTTACCTTCTCCAATCTCAG+AGG + chr5.2:63405199-63405218 None:intergenic 40.0%
! AAGATATAATGGGGAACGAG+TGG - chr5.2:63406073-63406092 MS.gene017238:CDS 40.0%
! ATTCCCTCTGATGCCAATTT+TGG - chr5.2:63403955-63403974 MS.gene017238:intron 40.0%
! CAAAATACTAAGGGCTTGCT+AGG + chr5.2:63405725-63405744 None:intergenic 40.0%
! CCTCGTATTTTGCAATCAGA+AGG - chr5.2:63406033-63406052 MS.gene017238:CDS 40.0%
! CTAGCAAGCCCTTAGTATTT+TGG - chr5.2:63405723-63405742 MS.gene017238:intron 40.0%
! CTGATAGTGCTAAATGTGCA+AGG + chr5.2:63407047-63407066 None:intergenic 40.0%
! TATTGATGGTAGACTACTGG+TGG - chr5.2:63404867-63404886 MS.gene017238:CDS 40.0%
! TGTAGTGCCCTTATTTGAGA+AGG - chr5.2:63405828-63405847 MS.gene017238:intron 40.0%
!! ATATTTGGCTTGACACTAGG+CGG + chr5.2:63406831-63406850 None:intergenic 40.0%
!! CTTTACCTGCTTTTGTTCTG+AGG - chr5.2:63404142-63404161 MS.gene017238:intron 40.0%
!! GGGGAGTATCCTTTATATTC+AGG - chr5.2:63405435-63405454 MS.gene017238:intron 40.0%
!!! CTATGGTTTTTCAGGTCTTC+AGG - chr5.2:63407319-63407338 MS.gene017238:intron 40.0%
!!! GCATTGTTTTTGGTCGATTG+AGG + chr5.2:63404826-63404845 None:intergenic 40.0%
!!! GCTTTTGTTCTGAGGTTTCT+TGG - chr5.2:63404150-63404169 MS.gene017238:intron 40.0%
!!! TAGCAGGATCGTACCTTTTT+TGG + chr5.2:63407395-63407414 None:intergenic 40.0%
!!! TATTTTTGGGATGTGCGGAT+TGG - chr5.2:63407553-63407572 MS.gene017238:intron 40.0%
AAAGGGTGGTCTTTGATCTC+TGG - chr5.2:63403249-63403268 MS.gene017238:CDS 45.0%
AAGAGCTGGAGAAATTGTCG+GGG - chr5.2:63405415-63405434 MS.gene017238:intron 45.0%
ACAAGCTCAAAGAGATGGCA+TGG - chr5.2:63404960-63404979 MS.gene017238:CDS 45.0%
ACAAGTCACTCAACGGATGA+GGG - chr5.2:63408122-63408141 MS.gene017238:intron 45.0%
ACTGAAACCAGTTGCTGCAA+TGG + chr5.2:63406690-63406709 None:intergenic 45.0%
AGGAAGGTTCAACTGGTGAA+TGG - chr5.2:63403223-63403242 MS.gene017238:CDS 45.0%
AGTCAGAGCAGGACTTTGTA+TGG + chr5.2:63403990-63404009 None:intergenic 45.0%
ATCAAACCCGAGACCTTTAG+AGG + chr5.2:63403937-63403956 None:intergenic 45.0%
ATGTCTCGGTATCACAATGG+CGG + chr5.2:63404732-63404751 None:intergenic 45.0%
ATTCAACCACCAAGTGGACA+GGG - chr5.2:63407924-63407943 MS.gene017238:intron 45.0%
CAAGAGCTGGAGAAATTGTC+GGG - chr5.2:63405414-63405433 MS.gene017238:CDS 45.0%
CAAGGACTACTTCAGTGCTT+TGG + chr5.2:63407661-63407680 None:intergenic 45.0%
CAATGACCGACTAATCCTAG+GGG + chr5.2:63404050-63404069 None:intergenic 45.0%
CCAAACTCTGCAACAAATGC+GGG - chr5.2:63403280-63403299 MS.gene017238:CDS 45.0%
CCAATGACCGACTAATCCTA+GGG + chr5.2:63404051-63404070 None:intergenic 45.0%
CCACCAAAATTGGCATCAGA+GGG + chr5.2:63403961-63403980 None:intergenic 45.0%
CGTGTTTCAATCTCAGCCTT+TGG - chr5.2:63403552-63403571 MS.gene017238:CDS 45.0%
CTCTTTGAGCTTGTGACCAA+CGG + chr5.2:63404954-63404973 None:intergenic 45.0%
GAAATGCAGCAATTGCAGCA+AGG - chr5.2:63404438-63404457 MS.gene017238:CDS 45.0%
GAACATCTGCGTTTGGGTAA+TGG - chr5.2:63406612-63406631 MS.gene017238:CDS 45.0%
GAATCACCACAAAACATCCG+AGG - chr5.2:63407871-63407890 MS.gene017238:intron 45.0%
GCCAAACTCTGCAACAAATG+CGG - chr5.2:63403279-63403298 MS.gene017238:CDS 45.0%
GTCATACATGCCGCAATTAC+AGG + chr5.2:63405983-63406002 None:intergenic 45.0%
TACAAGTCACTCAACGGATG+AGG - chr5.2:63408121-63408140 MS.gene017238:intron 45.0%
TACTTTCTCGATACTGGCCA+AGG - chr5.2:63405382-63405401 MS.gene017238:CDS 45.0%
TCCTCCATCCAGTTTCATGA+CGG + chr5.2:63404420-63404439 None:intergenic 45.0%
TGAGGTGCACCAGAAAAGTT+TGG + chr5.2:63406510-63406529 None:intergenic 45.0%
TGGTCACAAGCTCAAAGAGA+TGG - chr5.2:63404955-63404974 MS.gene017238:CDS 45.0%
TTCGAGTACCTTGATTTCGG+TGG - chr5.2:63404596-63404615 MS.gene017238:CDS 45.0%
TTGCAAGGACTGTATGCAAG+GGG + chr5.2:63406160-63406179 None:intergenic 45.0%
! ATACCTCAGCACACGCTTTT+GGG + chr5.2:63405897-63405916 None:intergenic 45.0%
! ATTGGACCCCTAGGATTAGT+CGG - chr5.2:63404041-63404060 MS.gene017238:intron 45.0%
! ATTTAGGAACCCCCGGTTTT+CGG - chr5.2:63406978-63406997 MS.gene017238:intron 45.0%
! CAAATGTTTGGGATGCAGAC+AGG - chr5.2:63407226-63407245 MS.gene017238:intron 45.0%
! CATTGACTATCCCCTGCTTA+CGG - chr5.2:63404325-63404344 MS.gene017238:intron 45.0%
! CTTGCCAATGCAGCAGTTTT+AGG - chr5.2:63407810-63407829 MS.gene017238:intron 45.0%
! TATACCTCAGCACACGCTTT+TGG + chr5.2:63405898-63405917 None:intergenic 45.0%
! TCATGTTTTCCCTGTCCACT+TGG + chr5.2:63407936-63407955 None:intergenic 45.0%
! TTGTGCTCCTCTAAAGGTCT+CGG - chr5.2:63403927-63403946 MS.gene017238:intron 45.0%
! TTTTTCCCCTTCACATCAGC+AGG + chr5.2:63405357-63405376 None:intergenic 45.0%
! TTTTTGCAGCCTATCCACAG+TGG - chr5.2:63404551-63404570 MS.gene017238:intron 45.0%
!! ATGGACTAGCCCACCAAAAT+TGG + chr5.2:63403971-63403990 None:intergenic 45.0%
!! CCTAGGATTAGTCGGTCATT+GGG - chr5.2:63404049-63404068 MS.gene017238:intron 45.0%
!! CCTCTGATGCCAATTTTGGT+GGG - chr5.2:63403959-63403978 MS.gene017238:intron 45.0%
!! TGGGTAATGGAACTGCTGAT+TGG - chr5.2:63406625-63406644 MS.gene017238:CDS 45.0%
!! AAATATCTTATAATATATAT+TGG - chr5.2:63407132-63407151 MS.gene017238:intron 5.0%
!!! ATTTTTGAAAATATAATTAA+AGG - chr5.2:63406424-63406443 MS.gene017238:CDS 5.0%
!!! TAATTAATTCTTATATTTTA+TGG - chr5.2:63407693-63407712 MS.gene017238:intron 5.0%
!!! TTTTTGAAAATATAATTAAA+GGG - chr5.2:63406425-63406444 MS.gene017238:CDS 5.0%
AAAACCAGTGCCTCTCCATC+AGG - chr5.2:63407008-63407027 MS.gene017238:CDS 50.0%
AAACCAGTGCCTCTCCATCA+GGG - chr5.2:63407009-63407028 MS.gene017238:CDS 50.0%
AAGTCGGTGAATCAAGCCGT+TGG - chr5.2:63404935-63404954 MS.gene017238:CDS 50.0%
ACCGTCATGAAACTGGATGG+AGG - chr5.2:63404416-63404435 MS.gene017238:intron 50.0%
ACGGATGAGGGAAGCCTAAA+TGG - chr5.2:63408134-63408153 MS.gene017238:intron 50.0%
AGACTACTGGTGGAACAAGC+TGG - chr5.2:63404877-63404896 MS.gene017238:CDS 50.0%
AGAGCTGGAGAAATTGTCGG+GGG - chr5.2:63405416-63405435 MS.gene017238:intron 50.0%
ATCCCAAACCAACACCGCTA+GGG + chr5.2:63403901-63403920 None:intergenic 50.0%
CAATGGTCCATTGCAGCAAC+TGG - chr5.2:63406680-63406699 MS.gene017238:intron 50.0%
CACACGATACAAGTGCATCC+AGG + chr5.2:63407903-63407922 None:intergenic 50.0%
CATTCAACCACCAAGTGGAC+AGG - chr5.2:63407923-63407942 MS.gene017238:intron 50.0%
CCAATTCGACCTGCATCACT+CGG + chr5.2:63405862-63405881 None:intergenic 50.0%
CCCAATGACCGACTAATCCT+AGG + chr5.2:63404052-63404071 None:intergenic 50.0%
CCCACCAAAATTGGCATCAG+AGG + chr5.2:63403962-63403981 None:intergenic 50.0%
CCTAAATGGAGGTCAGCTTG+AGG - chr5.2:63408148-63408167 MS.gene017238:intron 50.0%
CCTCAAGCTGACCTCCATTT+AGG + chr5.2:63408151-63408170 None:intergenic 50.0%
CTGGTGAATGGAAGAAAGGG+TGG - chr5.2:63403235-63403254 MS.gene017238:CDS 50.0%
CTTACCAGACAAAGCTGGGA+GGG + chr5.2:63404647-63404666 None:intergenic 50.0%
GATGAAGCAGGTACTAGTGG+TGG - chr5.2:63408083-63408102 MS.gene017238:intron 50.0%
GATGAGGGAAGCCTAAATGG+AGG - chr5.2:63408137-63408156 MS.gene017238:intron 50.0%
GCATCGTAAGGCTCTTGAAC+CGG + chr5.2:63407998-63408017 None:intergenic 50.0%
GCTTAAGAGTCTCACAGGCA+AGG + chr5.2:63407974-63407993 None:intergenic 50.0%
GGTGGTCTTTGATCTCTGGT+GGG - chr5.2:63403253-63403272 MS.gene017238:CDS 50.0%
GTGTGCATTCAACCACCAAG+TGG - chr5.2:63407918-63407937 MS.gene017238:intron 50.0%
GTGTTAAGTCCGAGTGATGC+AGG - chr5.2:63405850-63405869 MS.gene017238:intron 50.0%
TCCACCGTCATGAAACTGGA+TGG - chr5.2:63404413-63404432 MS.gene017238:intron 50.0%
TCCATCCAGTTTCATGACGG+TGG + chr5.2:63404417-63404436 None:intergenic 50.0%
TCGTTGACAGCGTGATACTC+CGG - chr5.2:63403669-63403688 MS.gene017238:CDS 50.0%
TCTCCAATCTCAGAGGCCAA+CGG + chr5.2:63405192-63405211 None:intergenic 50.0%
! ACGATGCCTCGGATGTTTTG+TGG + chr5.2:63407880-63407899 None:intergenic 50.0%
! CCCGCATTTGTTGCAGAGTT+TGG + chr5.2:63403283-63403302 None:intergenic 50.0%
! CCCTCTGATGCCAATTTTGG+TGG - chr5.2:63403958-63403977 MS.gene017238:intron 50.0%
! GGCCCATTTAAAGTCAGAGC+AGG + chr5.2:63404001-63404020 None:intergenic 50.0%
! TGTGCTCCTCTAAAGGTCTC+GGG - chr5.2:63403928-63403947 MS.gene017238:intron 50.0%
! TGTTTTCCCTGTCCACTTGG+TGG + chr5.2:63407933-63407952 None:intergenic 50.0%
!! CCCTAGGATTAGTCGGTCAT+TGG - chr5.2:63404048-63404067 MS.gene017238:intron 50.0%
!! CTGCATTGGCAAGAGCATCT+AGG + chr5.2:63407803-63407822 None:intergenic 50.0%
!! TTGGCCTCTGAGATTGGAGA+AGG - chr5.2:63405192-63405211 MS.gene017238:intron 50.0%
AAGCTGGGAGGGCTTAACAC+AGG + chr5.2:63404636-63404655 None:intergenic 55.0%
AATCCCACCGTCCAATTGCG+GGG + chr5.2:63404024-63404043 None:intergenic 55.0%
AGGCAAGGCAAGTGCATGTC+GGG + chr5.2:63407959-63407978 None:intergenic 55.0%
ATCAGACCAGCTCGGTCCAA+AGG - chr5.2:63407348-63407367 MS.gene017238:intron 55.0%
CAATCCCACCGTCCAATTGC+GGG + chr5.2:63404025-63404044 None:intergenic 55.0%
CAGGCAAGGCAAGTGCATGT+CGG + chr5.2:63407960-63407979 None:intergenic 55.0%
CCAATCCCACCGTCCAATTG+CGG + chr5.2:63404026-63404045 None:intergenic 55.0%
CCGAGTGATGCAGGTCGAAT+TGG - chr5.2:63405859-63405878 MS.gene017238:intron 55.0%
CCTGTGAGACTCTTAAGCGC+CGG - chr5.2:63407976-63407995 MS.gene017238:intron 55.0%
CCTTACCAGACAAAGCTGGG+AGG + chr5.2:63404648-63404667 None:intergenic 55.0%
CTGGTGGAACAAGCTGGCAA+AGG - chr5.2:63404883-63404902 MS.gene017238:CDS 55.0%
CTTGTTCCTTTGGACCGAGC+TGG + chr5.2:63407357-63407376 None:intergenic 55.0%
GATCCCAAACCAACACCGCT+AGG + chr5.2:63403902-63403921 None:intergenic 55.0%
GGGTGGTCTTTGATCTCTGG+TGG - chr5.2:63403252-63403271 MS.gene017238:CDS 55.0%
GGTTCTGCATCAGACCAGCT+CGG - chr5.2:63407340-63407359 MS.gene017238:intron 55.0%
GGTTGTTGAGCCTAGTGCTG+CGG - chr5.2:63408169-63408188 MS.gene017238:CDS 55.0%
GTTGTTGAGCCTAGTGCTGC+GGG - chr5.2:63408170-63408189 MS.gene017238:CDS 55.0%
TACCCACTTGGTTGCCCTAG+CGG - chr5.2:63403884-63403903 MS.gene017238:intron 55.0%
TCCAATTGTCCCGCAGCACT+AGG + chr5.2:63408182-63408201 None:intergenic 55.0%
TGATCTCTCATCCACCACGC+CGG - chr5.2:63405328-63405347 MS.gene017238:CDS 55.0%
TTAAATGGGCCCCCCGCAAT+TGG - chr5.2:63404010-63404029 MS.gene017238:intron 55.0%
TTCCCCTTCACATCAGCAGG+TGG + chr5.2:63405354-63405373 None:intergenic 55.0%
! CCTCCCAGCTTTGTCTGGTA+AGG - chr5.2:63404645-63404664 MS.gene017238:CDS 55.0%
! TAAGCCCTCCCAGCTTTGTC+TGG - chr5.2:63404640-63404659 MS.gene017238:CDS 55.0%
! TTACCCTGATGGAGAGGCAC+TGG + chr5.2:63407015-63407034 None:intergenic 55.0%
!! AAACATCCGAGGCATCGTCC+TGG - chr5.2:63407882-63407901 MS.gene017238:intron 55.0%
!! TGCCCTAGCGGTGTTGGTTT+GGG - chr5.2:63403896-63403915 MS.gene017238:intron 55.0%
!! TTGCCCTAGCGGTGTTGGTT+TGG - chr5.2:63403895-63403914 MS.gene017238:intron 55.0%
!! TTTGGCTTGACACTAGGCGG+CGG + chr5.2:63406828-63406847 None:intergenic 55.0%
ACACCGCTAGGGCAACCAAG+TGG + chr5.2:63403890-63403909 None:intergenic 60.0%
ATCCCACCGTCCAATTGCGG+GGG + chr5.2:63404023-63404042 None:intergenic 60.0%
CACCGCTAGGGCAACCAAGT+GGG + chr5.2:63403889-63403908 None:intergenic 60.0%
CAGCTGACGACGACTCGTCA+GGG + chr5.2:63407851-63407870 None:intergenic 60.0%
CCGCAATTGGACGGTGGGAT+TGG - chr5.2:63404023-63404042 MS.gene017238:intron 60.0%
CCGGCGCTTAAGAGTCTCAC+AGG + chr5.2:63407979-63407998 None:intergenic 60.0%
CCTTCACATCAGCAGGTGGC+CGG + chr5.2:63405350-63405369 None:intergenic 60.0%
CGGCCACCTGCTGATGTGAA+GGG - chr5.2:63405348-63405367 MS.gene017238:CDS 60.0%
CTTGGTTGCCCTAGCGGTGT+TGG - chr5.2:63403890-63403909 MS.gene017238:intron 60.0%
GCCTAGTGCTGCGGGACAAT+TGG - chr5.2:63408178-63408197 MS.gene017238:CDS 60.0%
GGCCACCTGCTGATGTGAAG+GGG - chr5.2:63405349-63405368 MS.gene017238:CDS 60.0%
GTGCATCCAGGACGATGCCT+CGG + chr5.2:63407891-63407910 None:intergenic 60.0%
! GCTCCCAAAAGCGTGTGCTG+AGG - chr5.2:63405891-63405910 MS.gene017238:intron 60.0%
!! CTGCCGTTGGCCTCTGAGAT+TGG - chr5.2:63405186-63405205 MS.gene017238:intron 60.0%
ATGGGCCCCCCGCAATTGGA+CGG - chr5.2:63404014-63404033 MS.gene017238:intron 65.0%
CCAGCTGACGACGACTCGTC+AGG + chr5.2:63407852-63407871 None:intergenic 65.0%
CCGGCCACCTGCTGATGTGA+AGG - chr5.2:63405347-63405366 MS.gene017238:CDS 65.0%
CCTGACGAGTCGTCGTCAGC+TGG - chr5.2:63407849-63407868 MS.gene017238:intron 65.0%
GACGGTGGGATTGGACCCCT+AGG - chr5.2:63404032-63404051 MS.gene017238:intron 65.0%
TCCCACCGTCCAATTGCGGG+GGG + chr5.2:63404022-63404041 None:intergenic 65.0%
ACATCAGCAGGTGGCCGGCG+TGG + chr5.2:63405345-63405364 None:intergenic 70.0%
GCCCCCCGCAATTGGACGGT+GGG - chr5.2:63404018-63404037 MS.gene017238:intron 70.0%
GGCCCCCCGCAATTGGACGG+TGG - chr5.2:63404017-63404036 MS.gene017238:intron 75.0%
TCAGCAGGTGGCCGGCGTGG+TGG + chr5.2:63405342-63405361 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 63403189 63408268 63403189 ID=MS.gene017238
chr5.2 mRNA 63403189 63408268 63403189 ID=MS.gene017238.t1;Parent=MS.gene017238
chr5.2 exon 63408156 63408268 63408156 ID=MS.gene017238.t1.exon1;Parent=MS.gene017238.t1
chr5.2 CDS 63408156 63408268 63408156 ID=cds.MS.gene017238.t1;Parent=MS.gene017238.t1
chr5.2 exon 63406998 63407079 63406998 ID=MS.gene017238.t1.exon2;Parent=MS.gene017238.t1
chr5.2 CDS 63406998 63407079 63406998 ID=cds.MS.gene017238.t1;Parent=MS.gene017238.t1
chr5.2 exon 63406796 63406897 63406796 ID=MS.gene017238.t1.exon3;Parent=MS.gene017238.t1
chr5.2 CDS 63406796 63406897 63406796 ID=cds.MS.gene017238.t1;Parent=MS.gene017238.t1
chr5.2 exon 63406018 63406658 63406018 ID=MS.gene017238.t1.exon4;Parent=MS.gene017238.t1
chr5.2 CDS 63406018 63406658 63406018 ID=cds.MS.gene017238.t1;Parent=MS.gene017238.t1
chr5.2 exon 63405545 63405641 63405545 ID=MS.gene017238.t1.exon5;Parent=MS.gene017238.t1
chr5.2 CDS 63405545 63405641 63405545 ID=cds.MS.gene017238.t1;Parent=MS.gene017238.t1
chr5.2 exon 63405259 63405433 63405259 ID=MS.gene017238.t1.exon6;Parent=MS.gene017238.t1
chr5.2 CDS 63405259 63405433 63405259 ID=cds.MS.gene017238.t1;Parent=MS.gene017238.t1
chr5.2 exon 63405104 63405180 63405104 ID=MS.gene017238.t1.exon7;Parent=MS.gene017238.t1
chr5.2 CDS 63405104 63405180 63405104 ID=cds.MS.gene017238.t1;Parent=MS.gene017238.t1
chr5.2 exon 63404570 63404995 63404570 ID=MS.gene017238.t1.exon8;Parent=MS.gene017238.t1
chr5.2 CDS 63404570 63404995 63404570 ID=cds.MS.gene017238.t1;Parent=MS.gene017238.t1
chr5.2 exon 63404427 63404473 63404427 ID=MS.gene017238.t1.exon9;Parent=MS.gene017238.t1
chr5.2 CDS 63404427 63404473 63404427 ID=cds.MS.gene017238.t1;Parent=MS.gene017238.t1
chr5.2 exon 63404057 63404124 63404057 ID=MS.gene017238.t1.exon10;Parent=MS.gene017238.t1
chr5.2 CDS 63404057 63404124 63404057 ID=cds.MS.gene017238.t1;Parent=MS.gene017238.t1
chr5.2 exon 63403189 63403721 63403189 ID=MS.gene017238.t1.exon11;Parent=MS.gene017238.t1
chr5.2 CDS 63403189 63403721 63403189 ID=cds.MS.gene017238.t1;Parent=MS.gene017238.t1
Gene Sequence

>MS.gene017238

ATGGGGGTTGAAGTGTGTATGAATAATTATTGTAAGGAAGGTTCAACTGGTGAATGGAAGAAAGGGTGGTCTTTGATCTCTGGTGGGTTTGCCAAACTCTGCAACAAATGCGGGTAAATTTCATTTCTTTAGTTTATCTCTCTTTTACTTGAGCTGAAATGTTATCAGAAATTTGATTTCACAATGTTATAATTTTGGGGTTTTGACTTTGATGTTATTGTTTTGATCCAAATTAATAATTTTGGGATTTGAGGTTGACTTGAGTGTTCTTATGAGTTCATGTTGGGTTAGTCAATAGTCAAAAGTTTCAACCCTTTTTCTTTTCTGGGGTTTTCAGGGATTTCCTGTAACTGTGCATTTATGCGTGTTTCAATCTCAGCCTTTGGATGAAAATGATGATCAGACCACTCATATTTAAAGTTGTATTTTAAAGTTGAAATCAAAATATGAAATGCTCGGTTTTCATCCAAGAACTGAGATTCGTTGACAGCGTGATACTCCGGTCTTAAATATAAGCAAAAGTTGTTCAGAAAAAGTTGATGTAGACCAAATACATCAACTTTCTTTGACCAACTTTTACTTATACTTAAGACGGGACGTAACCATCAGTTTAAGTAATGTACCCTTTCTGTTCAGTCTACATTTGTGTATTTGAACTCATGATGCTGTTTCCTGCAAATGATTATCTTAATGTGTACCCACTTGGTTGCCCTAGCGGTGTTGGTTTGGGATCTTACTTTGTGCTCCTCTAAAGGTCTCGGGTTTGATTCCCTCTGATGCCAATTTTGGTGGGCTAGTCCATACAAAGTCCTGCTCTGACTTTAAATGGGCCCCCCGCAATTGGACGGTGGGATTGGACCCCTAGGATTAGTCGGTCATTGGGATTATACCGAGTTTTCTAAAAAAAAATTGGATTAATAAAACTTGATCTTGCTGTTCTCAGTCTGATGCTACTTTACCTGCTTTTGTTCTGAGGTTTCTTGGTTTTGTTAGTAAGTCAGGTTCAGCTCTTTAAAGTCCATGTTGCAATTTATAGGGTAAAAATATATTTTTTGCTTGTTCAAATCAAACATATGTTTAGGTTTTGCTGTTAAGCAGTCTGACTGTCTAGAATTTTTTATCAGTAATGATTTATTCATTGACTATCCCCTGCTTACGGATTCTTAATTTATCACTCTTGTGTGTTTAGACTTGCCTATGAGAATTCACATTTCTGTGATAAATTCCACCGTCATGAAACTGGATGGAGGAAATGCAGCAATTGCAGCAAGGTAAAATTTATGTTTGATTTTTTGTACTATTTAAATACTCATTAAGCCTTGTCTTTCTCTCCTTTGATATTGAAATATATTATTTGATTTTTTTTTGCAGCCTATCCACAGTGGATGTATAGTATCAAAGTCTTCGTTCGAGTACCTTGATTTCGGTGGTATAAGTTGTGTTACCTGTGTTAAGCCCTCCCAGCTTTGTCTGGTAAGGTTAAGTTGAATATTCATTTCTGTATAATGATTTCGAACCCGAAATTTTGTTATTTGATTCTCCGCCATTGTGATACCGAGACATAAATTTACAGATTCATGTTATCATTGAATGTTTTTCTATGGATACAGGATACTGAAAATCATAATAGGTTCCCTCAATCGACCAAAAACAATGCAAGTGATCGATATGGTGAACATATTGATGGTAGACTACTGGTGGAACAAGCTGGCAAAGGAAACCTTATGCAGTTGTGTAGAATTGGTGAAGTCGGTGAATCAAGCCGTTGGTCACAAGCTCAAAGAGATGGCATGGTTTCATGTATTGGTCCAAAAACCGAAGAAGTTAAGTGTCAATTCAACAAAGAGGATACAAGATTTTTGAATGTAATGAAACATTCTAGTCCTTTAACAGCATTTACTACATTGGAAAATAATAGACCAACATGGGAGACTAAAAGTATAGATGAAACGCTTTCACTAAAGATGGCTCTAGGAACTTCATCAAGAAATTCTGTTCTGCCGTTGGCCTCTGAGATTGGAGAAGGTAAACTTGAGGGTAAAGCATCTTCTCATTTTCAACAAGGGCAAACATCTCAGTCTATATTGGCTCAACTATCAAAGACTGGAATTACCATGAGTCTTGAAACAAATAAAGGCATGATCTCTCATCCACCACGCCGGCCACCTGCTGATGTGAAGGGGAAAAATCAGTTACTTTCTCGATACTGGCCAAGGATTACTGATCAAGAGCTGGAGAAATTGTCGGGGGAGTATCCTTTATATTCAGGTTCTGTTTGGATAAACAACTTAATAAGCTCTTATATCATAAATACTTATGATATAAGTGCTTATGTATAAGCTGTTTTTGAAACTAAGATAAAATAAAGTCAAACTGTTTTCATTAAGCTATAAGTTGTTTTCATAAGCTATCCTAGAGAACTTATCGAAATAAGCTGAAAACAACTCATGGACATGCCGTTAAGCTGTTTCGATAAACTCTCTCAAATATTATCACGAGTACTTATGCAAATAGTAAGCTCAAATAAGTCAATCCTAGCAAGCCCTTAGTATTTTGGTCTATTATACATCTACCTTAAACATGCAAAGTTGATTCATCAACAGTTTCCCTTAACATTATTATCTCAGTTTGAAGTCTACTGTAGTGCCCTTATTTGAGAAGGTGTTAAGTCCGAGTGATGCAGGTCGAATTGGTCGTCTTGTGCTCCCAAAAGCGTGTGCTGAGGTATACTTTGATGTTTATCTTGACTCTGTCTATAGAAGATTTTTTATTTTAAAGAAATACACATTTCCCTGTAATTGCGGCATGTATGACAAATTGGTATATGAATTTCAGGCTTTTCTTCCTCGTATTTTGCAATCAGAAGGTGTTCCTTTACAGTTCCAAGATATAATGGGGAACGAGTGGACTTTTCAGTTCAGATTTTGGCCTAATAATAACAGTAGGATGTATGTATTGGAGGGTGTGACCCCTTGCATACAGTCCTTGCAATTAAATGCTGGTGATACTGGTATACGTCAATCTACATCATGATTTTGTTTCACATCTAAAGTTATCATCAATTGATATGAATTTTTTTTTGTTACAGTAACATTTAGTCGGATAGATCCTGGGAAAAAATTTCTATTTGGTTTTAGAAGGTCATTGACTTCTGTTGTTACACAGGTTATGACATGATTTTCAGTTTTACTATCTTTAGCTTCTTCAGATGATAACATGTTTATATTCTTCACTTATTTTTGAAAATATAATTAAAGGGTTATCTTTAAACAGGATGCCTCTACATCTTCTCATTCTAACGGCATTTCGATAAAGGATCCAAACTTTTCTGGTGCACCTCAGAATTTGAACTCATTAGGTAGTTTTTCTAATCTTCTTCAATCAATGAAAGGTAACGGGGAACCTTACTTAAATGGACATTCAGAACATCTGCGTTTGGGTAATGGAACTGCTGATTGGCTTAAAACTGCACATAGTGAGGAGGAAATGAACAATGGTCCATTGCAGCAACTGGTTTCAGTTTCAGAGAAGAAGAGGTCTCGCAATATTGGGACGAAAACTAAGAGGTTGCACATTCATAGCGAAGATGCTATGGAATTGAGACTTACATGGGAAGAAGCACAAGAATTTCTTTGTCCGCCGCCTAGTGTCAAGCCAAATATTGTAACAATTGAGGACCAAGTATTTGAAGAATATGATGTAAGTGAGAAACTGTGAATGATATATTTTGGATTTTTGGAGAATCATCTTCAAATTTCTGTTACCTGGCTTATGTTTTTTATTTATTTCATTTAGGAACCCCCGGTTTTCGGAAAGATTAAAACCAGTGCCTCTCCATCAGGGTAAGATTATATACCTTGCACATTTAGCACTATCAGTTTTATATGCTGTTGATCACTTATTCATGCCTTCAAATATGTACAATGATAGTCAGAAGATATGAAAATATCTTATAATATATATTGGTATTTTCATTGAGTATCTTTGAAGTAACAGTCAATATTTTTTGAACTATATTATTATCTTTAGTCCTATTTCAAATGTTTGGGATGCAGACAGGTCAACATTATTCGGTGCTTTTGAACTTCTACTGATTGAAGTGAGTATATCGTAATTATTCTTATTATGTACTATGGTTTTTCAGGTCTTCAGGTTCTGCATCAGACCAGCTCGGTCCAAAGGAACAAGAAAGTCTTCAAAGAACCAAAAAAGGTACGATCCTGCTATCGTTTTTTTTTTTTATTTATACATGCTCTGTAGTAGTCATGTTTATCGGAATAGAGTTAGAGGTTGATGCTTCAGTAAAATTGATTAAATGATCATTCTGTTTCGTGCATGTGTGAAATGTTTTACATATATCTAAATATTTTTGGGATGTGCGGATTGGTTTCATAAATGATATAATCCTTGTTAAATTCTGTGCTTGCTGTCTAATGTTCATTCATTGAATCATATTCCTAAAGTTATTTCCAAAGCACTGAAGTAGTCCTTGATAACTAGTACTTAATTAATTCTTATATTTTATGGATGTGTATGATCTTCCGCAGATTCTAAAAAGAAGCGAAAAATTGCTGAAAAGAGCAAGTCAATTCAAGAACACAAGCTTTCAGGCCTAGATGCTCTTGCCAATGCAGCAGTTTTAGGCAATAATCTTGCTGACCCTGACGAGTCGTCGTCAGCTGGAATCACCACAAAACATCCGAGGCATCGTCCTGGATGCACTTGTATCGTGTGCATTCAACCACCAAGTGGACAGGGAAAACATGACCCGACATGCACTTGCCTTGCCTGTGAGACTCTTAAGCGCCGGTTCAAGAGCCTTACGATGCGTAAGAAGAAAAACCAATTAGAATCTGAAGCAGTTGCTGACCAAAACAATCAAATTAATCATATAGATGAAGCAGGTACTAGTGGTGGTGTAACGAGACAAGATACAAGTCACTCAACGGATGAGGGAAGCCTAAATGGAGGTCAGCTTGAGGTTGTTGAGCCTAGTGCTGCGGGACAATTGGATTTGAATTCTCATCCCAGTCATGAAGAAATGGAAACTGATACATATAACAGGCCAAAGCATGACTAG
Protein sequence

>MS.gene017238.t1

MGVEVCMNNYCKEGSTGEWKKGWSLISGGFAKLCNKCGLAYENSHFCDKFHRHETGWRKCSNCSKPIHSGCIVSKSSFEYLDFGGISCVTCVKPSQLCLDTENHNRFPQSTKNNASDRYGEHIDGRLLVEQAGKGNLMQLCRIGEVGESSRWSQAQRDGMVSCIGPKTEEVKCQFNKEDTRFLNVMKHSSPLTAFTTLENNRPTWETKSIDETLSLKMALGTSSRNSVLPLASEIGEGKLEGKASSHFQQGQTSQSILAQLSKTGITMSLETNKGMISHPPRRPPADVKGKNQLLSRYWPRITDQELEKLSGDLKSTVVPLFEKVLSPSDAGRIGRLVLPKACAEAFLPRILQSEGVPLQFQDIMGNEWTFQFRFWPNNNSRMYVLEGVTPCIQSLQLNAGDTVTFSRIDPGKKFLFGFRRSLTSVVTQDASTSSHSNGISIKDPNFSGAPQNLNSLGSFSNLLQSMKGNGEPYLNGHSEHLRLGNGTADWLKTAHSEEEMNNGPLQQLVSVSEKKRSRNIGTKTKRLHIHSEDAMELRLTWEEAQEFLCPPPSVKPNIVTIEDQVFEEYDEPPVFGKIKTSASPSGSSGSASDQLGPKEQESLQRTKKDSKKKRKIAEKSKSIQEHKLSGLDALANAAVLGNNLADPDESSSAGITTKHPRHRPGCTCIVCIQPPSGQGKHDPTCTCLACETLKRRFKSLTMRKKKNQLESEAVADQNNQINHIDEAGTSGGVTRQDTSHSTDEGSLNGGQLEVVEPSAAGQLDLNSHPSHEEMETDTYNRPKHD