AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene017456

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene017456.t1 MTR_5g079670 95.833 216 3 2 1 216 4 213 6.90e-149 412
MS.gene017456.t1 MTR_4g485530 73.050 141 37 1 1 140 4 144 6.09e-71 214
MS.gene017456.t1 MTR_4g073420 73.171 123 33 0 1 123 5 127 5.66e-69 213
MS.gene017456.t1 MTR_3g097450 71.545 123 35 0 1 123 5 127 4.76e-68 211
MS.gene017456.t1 MTR_8g095390 68.293 123 39 0 1 123 5 127 4.14e-64 201
MS.gene017456.t1 MTR_2g011660 68.293 123 38 1 1 122 5 127 1.32e-61 196
MS.gene017456.t1 MTR_1g085040 67.213 122 40 0 2 123 6 127 4.38e-61 195
MS.gene017456.t1 MTR_4g091490 67.480 123 39 1 1 122 5 127 7.86e-61 194
MS.gene017456.t1 MTR_4g105130 67.213 122 40 0 2 123 6 127 1.27e-60 194
MS.gene017456.t1 MTR_1g112760 66.393 122 41 0 2 123 7 128 2.30e-60 189
MS.gene017456.t1 MTR_3g074520 62.602 123 46 0 1 123 5 127 4.25e-60 192
MS.gene017456.t1 MTR_3g077110 66.393 122 41 0 2 123 6 127 7.08e-60 191
MS.gene017456.t1 MTR_7g011170 65.854 123 42 0 1 123 5 127 7.25e-60 190
MS.gene017456.t1 MTR_1g085640 45.581 215 90 3 2 216 6 193 1.24e-59 192
MS.gene017456.t1 MTR_5g029840 65.854 123 42 0 1 123 5 127 3.49e-59 189
MS.gene017456.t1 MTR_3g083540 65.041 123 43 0 1 123 34 156 1.09e-58 187
MS.gene017456.t1 MTR_2g089620 64.754 122 43 0 1 122 5 126 1.75e-58 187
MS.gene017456.t1 MTR_7g076740 50.532 188 73 4 1 175 5 185 1.77e-58 186
MS.gene017456.t1 MTR_4g102380 65.041 123 43 0 1 123 5 127 2.14e-58 185
MS.gene017456.t1 MTR_4g125520 71.429 112 32 0 1 112 5 116 2.41e-58 186
MS.gene017456.t1 MTR_7g110830 44.186 215 95 4 2 216 6 195 2.44e-58 188
MS.gene017456.t1 MTR_6g012690 65.041 123 43 0 1 123 5 127 6.72e-58 186
MS.gene017456.t1 MTR_4g082290 64.228 123 44 0 1 123 5 127 7.76e-58 188
MS.gene017456.t1 MTR_4g478180 60.976 123 48 0 1 123 6 128 1.45e-57 186
MS.gene017456.t1 MTR_3g065440 63.710 124 45 0 1 124 5 128 2.10e-57 184
MS.gene017456.t1 MTR_5g078140 54.902 153 68 1 1 152 5 157 4.60e-57 183
MS.gene017456.t1 MTR_4g082230 63.415 123 45 0 1 123 5 127 1.06e-56 185
MS.gene017456.t1 MTR_2g064160 65.041 123 43 0 2 124 5 127 2.16e-56 181
MS.gene017456.t1 MTR_8g027345 68.750 112 35 0 1 112 5 116 5.43e-56 180
MS.gene017456.t1 MTR_7g111290 66.393 122 41 0 2 123 6 127 5.63e-56 182
MS.gene017456.t1 MTR_5g007370 60.976 123 48 0 1 123 5 127 7.96e-56 179
MS.gene017456.t1 MTR_7g117730 66.964 112 37 0 1 112 5 116 2.36e-55 177
MS.gene017456.t1 MTR_6g009430 54.362 149 64 1 1 149 5 149 4.46e-55 179
MS.gene017456.t1 MTR_8g017440 63.559 118 43 0 2 119 6 123 1.52e-54 177
MS.gene017456.t1 MTR_8g031360 62.400 125 45 2 1 123 5 129 2.97e-54 175
MS.gene017456.t1 MTR_1g100653 63.393 112 41 0 1 112 5 116 4.98e-54 175
MS.gene017456.t1 MTR_4g121460 67.857 112 36 0 1 112 5 116 6.59e-54 176
MS.gene017456.t1 MTR_2g099740 64.407 118 42 0 2 119 6 123 8.93e-54 177
MS.gene017456.t1 MTR_7g115650 63.158 114 42 0 1 114 5 118 1.12e-53 171
MS.gene017456.t1 MTR_8g098860 65.487 113 39 0 2 114 6 118 1.22e-53 174
MS.gene017456.t1 MTR_8g017500 63.559 118 43 0 2 119 6 123 1.60e-53 175
MS.gene017456.t1 MTR_3g461490 60.976 123 48 0 1 123 5 127 1.92e-53 174
MS.gene017456.t1 MTR_8g017540 63.559 118 43 0 2 119 52 169 9.47e-53 174
MS.gene017456.t1 MTR_4g100720 60.317 126 50 0 5 130 10 135 2.38e-52 167
MS.gene017456.t1 MTR_8g017340 64.706 119 41 1 2 119 6 124 5.97e-52 174
MS.gene017456.t1 MTR_1g076150 63.393 112 41 0 1 112 5 116 8.53e-52 168
MS.gene017456.t1 MTR_2g034790 64.286 112 40 0 1 112 5 116 2.45e-51 169
MS.gene017456.t1 MTR_8g017390 66.372 113 37 1 2 113 6 118 2.50e-51 172
MS.gene017456.t1 MTR_5g010020 66.667 105 35 0 2 106 6 110 2.51e-51 169
MS.gene017456.t1 MTR_8g017350 63.866 119 42 1 2 119 6 124 1.12e-50 174
MS.gene017456.t1 MTR_2g089450 61.404 114 44 0 1 114 5 118 1.19e-49 162
MS.gene017456.t1 MTR_1g043050 59.292 113 46 0 1 113 5 117 1.45e-49 162
MS.gene017456.t1 MTR_2g097910 63.810 105 38 0 8 112 20 124 2.82e-49 163
MS.gene017456.t1 MTR_4g065017 61.261 111 43 0 8 118 17 127 3.69e-49 163
MS.gene017456.t1 MTR_1g043080 58.407 113 47 0 1 113 5 117 4.39e-49 161
MS.gene017456.t1 MTR_7g010210 61.404 114 44 0 1 114 5 118 5.54e-49 162
MS.gene017456.t1 MTR_7g010210 61.404 114 44 0 1 114 5 118 8.02e-49 160
MS.gene017456.t1 MTR_7g096930 57.025 121 52 0 1 121 5 125 1.46e-48 160
MS.gene017456.t1 MTR_8g020490 63.636 110 40 0 6 115 6 115 2.65e-48 159
MS.gene017456.t1 MTR_3g039990 61.739 115 44 0 1 115 6 120 4.32e-48 160
MS.gene017456.t1 MTR_0140s0030 61.404 114 44 0 1 114 6 119 1.21e-47 159
MS.gene017456.t1 MTR_0489s0020 61.404 114 44 0 1 114 6 119 1.21e-47 159
MS.gene017456.t1 MTR_3g028740 61.468 109 42 0 4 112 18 126 1.55e-47 159
MS.gene017456.t1 MTR_7g087130 58.537 123 49 1 1 121 5 127 2.53e-47 159
MS.gene017456.t1 MTR_0063s0090 60.550 109 43 0 1 109 5 113 4.74e-47 155
MS.gene017456.t1 MTR_1g017000 57.018 114 48 1 1 113 5 118 5.69e-47 155
MS.gene017456.t1 MTR_0251s0050 60.177 113 44 1 1 112 5 117 8.69e-47 155
MS.gene017456.t1 MTR_5g042030 59.483 116 47 0 8 123 7 122 9.22e-47 156
MS.gene017456.t1 MTR_3g103570 58.772 114 46 1 1 113 5 118 1.11e-46 157
MS.gene017456.t1 MTR_4g057635 54.839 124 55 1 1 123 5 128 1.89e-46 156
MS.gene017456.t1 MTR_7g102110 57.759 116 48 1 1 115 5 120 2.53e-46 154
MS.gene017456.t1 MTR_0008s0390 59.649 114 45 1 1 113 5 118 2.67e-46 154
MS.gene017456.t1 MTR_0197s0010 55.303 132 57 1 12 141 5 136 3.19e-46 153
MS.gene017456.t1 MTR_6g012180 62.617 107 40 0 1 107 5 111 3.85e-46 155
MS.gene017456.t1 MTR_5g014990 57.018 114 48 1 1 113 5 118 6.89e-46 154
MS.gene017456.t1 MTR_2g067420 61.682 107 41 0 1 107 7 113 7.07e-46 155
MS.gene017456.t1 MTR_0008s0280 58.182 110 46 0 1 110 5 114 7.85e-46 152
MS.gene017456.t1 MTR_6g055910 58.036 112 47 0 3 114 9 120 9.58e-46 153
MS.gene017456.t1 MTR_2g089420 57.143 112 48 0 3 114 6 117 1.46e-45 157
MS.gene017456.t1 MTR_1g017140 56.140 114 49 1 1 113 5 118 1.62e-45 154
MS.gene017456.t1 MTR_0008s0470 57.895 114 47 1 1 113 5 118 1.93e-45 152
MS.gene017456.t1 MTR_1g100667 57.895 114 47 1 10 123 15 127 1.98e-45 152
MS.gene017456.t1 MTR_2g095520 61.682 107 40 1 1 106 5 111 2.47e-45 153
MS.gene017456.t1 MTR_5g079290 61.321 106 41 0 8 113 17 122 8.22e-45 150
MS.gene017456.t1 MTR_7g109320 60.870 115 45 0 1 115 5 119 8.44e-45 152
MS.gene017456.t1 MTR_5g079120 52.713 129 61 0 4 132 57 185 5.08e-44 149
MS.gene017456.t1 MTR_5g079220 57.658 111 47 0 3 113 16 126 5.24e-44 148
MS.gene017456.t1 MTR_3g052450 57.407 108 46 0 4 111 36 143 1.56e-43 153
MS.gene017456.t1 MTR_4g097570 59.434 106 42 1 1 105 5 110 2.71e-43 147
MS.gene017456.t1 MTR_1g073170 59.804 102 41 0 10 111 22 123 3.22e-43 146
MS.gene017456.t1 MTR_3g052430 59.048 105 43 0 7 111 40 144 4.85e-43 152
MS.gene017456.t1 MTR_6g090405 55.263 114 50 1 1 113 5 118 5.47e-43 145
MS.gene017456.t1 MTR_1g045610 56.364 110 48 0 2 111 15 124 1.26e-42 144
MS.gene017456.t1 MTR_5g078800 61.321 106 41 0 8 113 7 112 1.28e-42 144
MS.gene017456.t1 MTR_7g017260 60.185 108 41 1 8 113 25 132 1.63e-42 144
MS.gene017456.t1 MTR_0247s0040 63.725 102 37 0 8 109 7 108 2.42e-42 141
MS.gene017456.t1 MTR_0001s0360 60.377 106 42 0 8 113 7 112 2.75e-42 143
MS.gene017456.t1 MTR_8g060940 62.376 101 38 0 8 108 7 107 3.59e-42 143
MS.gene017456.t1 MTR_7g035075 59.434 106 43 0 7 112 13 118 4.37e-42 141
MS.gene017456.t1 MTR_5g078910 59.434 106 43 0 8 113 7 112 4.73e-42 144
MS.gene017456.t1 MTR_4g097570 58.879 107 42 2 1 105 5 111 1.06e-41 143
MS.gene017456.t1 MTR_3g011610 57.692 104 44 0 8 111 37 140 1.35e-41 147
MS.gene017456.t1 MTR_6g006030 56.140 114 48 1 1 112 5 118 1.57e-41 140
MS.gene017456.t1 MTR_5g078930 62.745 102 38 0 10 111 11 112 1.97e-41 140
MS.gene017456.t1 MTR_4g128670 57.009 107 45 1 1 106 5 111 2.54e-41 143
MS.gene017456.t1 MTR_0193s0090 56.034 116 50 1 8 123 7 121 6.46e-41 138
MS.gene017456.t1 MTR_5g078860 59.434 106 43 0 8 113 7 112 8.89e-41 141
MS.gene017456.t1 MTR_5g078950 60.784 102 40 0 8 109 7 108 1.43e-40 139
MS.gene017456.t1 MTR_1g110460 49.587 121 61 0 4 124 22 142 2.13e-40 140
MS.gene017456.t1 MTR_1g086530 49.573 117 59 0 8 124 33 149 5.49e-40 138
MS.gene017456.t1 MTR_1g086510 51.220 123 57 1 5 124 15 137 6.24e-40 137
MS.gene017456.t1 MTR_8g042410 56.731 104 45 0 8 111 37 140 9.18e-40 143
MS.gene017456.t1 MTR_1g062940 44.156 154 77 3 7 158 5 151 3.62e-39 134
MS.gene017456.t1 MTR_2g096380 52.336 107 51 0 5 111 3 109 2.91e-38 132
MS.gene017456.t1 MTR_4g063100 55.882 102 45 0 10 111 9 110 4.40e-38 132
MS.gene017456.t1 MTR_7g111290 69.048 84 26 0 40 123 2 85 4.03e-36 129
MS.gene017456.t1 MTR_3g045430 48.361 122 62 1 3 123 7 128 6.84e-36 128
MS.gene017456.t1 MTR_1g021230 51.923 104 50 0 8 111 57 160 6.87e-36 131
MS.gene017456.t1 MTR_5g488170 35.545 211 100 8 7 194 11 208 1.58e-35 125
MS.gene017456.t1 MTR_1g083630 47.656 128 59 2 4 124 8 134 1.87e-35 132
MS.gene017456.t1 MTR_5g088640 36.058 208 97 8 10 194 14 208 2.36e-35 126
MS.gene017456.t1 MTR_5g088080 36.058 208 97 8 10 194 14 208 2.49e-35 125
MS.gene017456.t1 MTR_5g088150 36.058 208 97 8 10 194 14 208 2.49e-35 125
MS.gene017456.t1 MTR_5g488210 36.058 208 97 8 10 194 14 208 2.49e-35 125
MS.gene017456.t1 MTR_2g088170 55.769 104 46 0 8 111 29 132 2.61e-35 130
MS.gene017456.t1 MTR_2g033170 49.587 121 61 0 4 124 20 140 3.44e-35 127
MS.gene017456.t1 MTR_4g123040 47.934 121 63 0 4 124 20 140 1.74e-33 122
MS.gene017456.t1 MTR_5g007300 60.714 84 33 0 1 84 57 140 2.57e-33 117
MS.gene017456.t1 MTR_5g062790 47.748 111 56 2 10 119 11 120 2.94e-33 121
MS.gene017456.t1 MTR_8g006470 49.074 108 54 1 4 110 6 113 2.39e-31 116
MS.gene017456.t1 MTR_6g055910 62.162 74 28 0 41 114 18 91 3.55e-31 115
MS.gene017456.t1 MTR_5g049190 38.037 163 80 4 4 160 13 160 1.61e-29 110
MS.gene017456.t1 MTR_4g029540 50.000 104 51 1 8 110 10 113 2.68e-29 110
MS.gene017456.t1 MTR_5g088610 45.946 111 58 2 10 119 11 120 2.73e-29 112
MS.gene017456.t1 MTR_5g070020 48.544 103 50 2 10 111 122 222 4.69e-29 111
MS.gene017456.t1 MTR_5g016510 48.624 109 55 1 10 118 5 112 6.69e-29 110
MS.gene017456.t1 MTR_4g063100 58.750 80 31 1 32 111 4 81 1.42e-28 107
MS.gene017456.t1 MTR_4g019370 48.739 119 57 3 10 127 38 153 1.93e-28 109
MS.gene017456.t1 MTR_3g463400 48.544 103 50 2 10 111 133 233 2.24e-28 111
MS.gene017456.t1 MTR_3g077650 47.748 111 55 2 5 114 176 284 1.89e-27 108
MS.gene017456.t1 MTR_4g094982 48.039 102 52 1 10 111 5 105 6.46e-27 104
MS.gene017456.t1 MTR_2g096380 58.904 73 30 0 39 111 18 90 7.87e-27 102
MS.gene017456.t1 MTR_3g101290 50.000 102 50 1 10 111 37 137 1.88e-26 102
MS.gene017456.t1 MTR_1g057980 36.000 150 94 2 7 156 77 224 2.13e-26 103
MS.gene017456.t1 MTR_4g128190 39.496 119 58 2 8 125 11 116 3.70e-26 101
MS.gene017456.t1 MTR_6g074860 46.364 110 53 3 10 115 4 111 8.26e-26 100
MS.gene017456.t1 MTR_3g110028 45.631 103 55 1 10 112 85 186 8.34e-26 105
MS.gene017456.t1 MTR_4g105660 46.296 108 55 2 8 114 178 283 1.14e-25 103
MS.gene017456.t1 MTR_7g037260 47.222 108 56 1 7 114 142 248 2.67e-25 101
MS.gene017456.t1 MTR_7g061330 45.631 103 55 1 10 112 113 214 3.61e-25 102
MS.gene017456.t1 MTR_7g461410 45.631 103 55 1 10 112 113 214 3.61e-25 102
MS.gene017456.t1 MTR_6g015455 48.039 102 52 1 10 111 5 105 4.60e-25 102
MS.gene017456.t1 MTR_7g061330 45.631 103 55 1 10 112 77 178 4.96e-25 102
MS.gene017456.t1 MTR_7g061330 32.000 100 66 2 10 108 25 123 8.38e-12 63.9
MS.gene017456.t1 MTR_1g026870 38.926 149 76 4 10 150 85 226 9.32e-25 102
MS.gene017456.t1 MTR_4g088015 45.192 104 56 1 7 110 218 320 1.20e-24 100
MS.gene017456.t1 MTR_5g082910 47.475 99 51 1 10 108 19 116 2.60e-24 97.8
MS.gene017456.t1 MTR_7g451170 44.118 102 56 1 10 111 191 291 3.38e-24 99.4
MS.gene017456.t1 MTR_1g085880 45.455 99 53 1 13 110 17 115 5.39e-24 94.7
MS.gene017456.t1 MTR_7g035350 45.000 100 54 1 10 109 225 323 8.03e-24 98.6
MS.gene017456.t1 MTR_4g082040 45.192 104 54 2 10 112 105 206 1.69e-23 97.4
MS.gene017456.t1 MTR_5g041570 45.192 104 54 2 10 112 134 235 2.20e-23 97.1
MS.gene017456.t1 MTR_1g085770 44.762 105 56 2 8 110 11 115 3.76e-23 94.7
MS.gene017456.t1 MTR_6g027340 46.392 97 49 2 10 105 16 110 8.75e-23 91.7
MS.gene017456.t1 MTR_6g027360 45.918 98 50 2 8 104 76 171 4.10e-22 92.0
MS.gene017456.t1 MTR_0023s0210 49.351 77 39 0 8 84 7 83 5.05e-22 86.3
MS.gene017456.t1 MTR_3g089045 45.872 109 56 2 4 111 10 116 1.13e-21 90.5
MS.gene017456.t1 MTR_7g450950 39.450 109 65 1 7 115 154 261 3.52e-21 90.1
MS.gene017456.t1 MTR_7g037130 43.689 103 57 1 7 109 142 243 5.14e-21 89.7
MS.gene017456.t1 MTR_5g010650 42.708 96 54 1 10 105 110 204 6.20e-21 90.5
MS.gene017456.t1 MTR_6g027370 36.765 136 82 3 10 144 99 231 9.58e-20 86.3
MS.gene017456.t1 MTR_7g086960 41.748 103 59 1 9 111 88 189 2.32e-19 85.1
MS.gene017456.t1 MTR_7g061550 31.544 149 82 3 13 141 10 158 1.25e-16 77.8
MS.gene017456.t1 MTR_2g088730 68.293 41 13 0 66 106 34 74 9.94e-16 69.7
MS.gene017456.t1 MTR_8g017480 59.574 47 19 0 2 48 6 52 1.08e-15 68.9
MS.gene017456.t1 MTR_6g055910 54.000 50 23 0 65 114 1 50 4.28e-15 71.6
MS.gene017456.t1 MTR_5g038910 35.000 100 64 1 12 111 28 126 4.83e-15 73.6
MS.gene017456.t1 MTR_5g038910 36.842 95 59 1 12 106 28 121 7.21e-15 72.8
MS.gene017456.t1 MTR_8g468380 35.714 112 70 2 12 123 24 133 8.90e-15 72.8
MS.gene017456.t1 MTR_4g063100 61.905 42 16 0 70 111 5 46 2.38e-13 66.2
MS.gene017456.t1 MTR_2g096380 59.524 42 17 0 70 111 5 46 1.41e-12 63.9
MS.gene017456.t1 MTR_4g046737 56.098 41 18 0 66 106 28 68 2.32e-12 60.8
MS.gene017456.t1 MTR_1g008970 45.455 66 36 0 30 95 110 175 4.40e-11 60.8
MS.gene017456.t1 MTR_2g023100 48.837 43 22 0 66 108 29 71 7.69e-11 56.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene017456.t1 AT4G38620 51.196 209 79 3 1 192 5 207 2.28e-71 219
MS.gene017456.t1 AT1G22640 73.387 124 33 0 1 124 5 128 6.55e-71 217
MS.gene017456.t1 AT2G16720 49.099 222 103 4 1 216 5 222 1.22e-70 216
MS.gene017456.t1 AT4G09460 72.358 123 34 0 1 123 5 127 6.90e-69 211
MS.gene017456.t1 AT4G34990 52.000 200 88 3 1 197 5 199 2.79e-67 208
MS.gene017456.t1 AT1G35515 50.000 206 91 4 1 198 5 206 3.46e-66 203
MS.gene017456.t1 AT4G28110 66.393 122 41 0 1 122 5 126 2.20e-63 198
MS.gene017456.t1 AT4G21440 60.417 144 50 1 1 144 5 141 2.98e-63 200
MS.gene017456.t1 AT5G16770 66.667 123 41 0 1 123 5 127 2.16e-62 197
MS.gene017456.t1 AT5G16770 66.667 123 41 0 1 123 5 127 2.16e-62 197
MS.gene017456.t1 AT4G05100 67.480 123 39 1 1 122 5 127 2.64e-62 197
MS.gene017456.t1 AT5G16770 66.667 123 41 0 1 123 5 127 3.88e-62 197
MS.gene017456.t1 AT5G16770 66.667 123 41 0 1 123 5 127 3.88e-62 197
MS.gene017456.t1 AT3G02940 67.480 123 40 0 1 123 5 127 1.01e-61 195
MS.gene017456.t1 AT5G26660 68.852 122 38 0 2 123 6 127 1.32e-61 196
MS.gene017456.t1 AT5G15310 62.590 139 49 1 1 139 5 140 1.73e-61 192
MS.gene017456.t1 AT3G02940 67.480 123 40 0 1 123 5 127 2.23e-61 194
MS.gene017456.t1 AT3G02940 67.480 123 40 0 1 123 5 127 2.23e-61 194
MS.gene017456.t1 AT5G15310 67.480 123 40 0 1 123 5 127 3.82e-61 194
MS.gene017456.t1 AT5G15310 67.480 123 40 0 1 123 5 127 3.85e-61 194
MS.gene017456.t1 AT1G57560 67.213 122 40 0 2 123 6 127 3.96e-61 194
MS.gene017456.t1 AT1G57560 67.213 122 40 0 2 123 6 127 4.80e-61 192
MS.gene017456.t1 AT3G01140 67.480 123 40 0 1 123 5 127 1.91e-60 193
MS.gene017456.t1 AT3G13540 51.744 172 74 3 1 166 16 184 1.94e-60 190
MS.gene017456.t1 AT1G09540 67.213 122 40 0 2 123 6 127 4.49e-60 192
MS.gene017456.t1 AT4G01680 67.480 123 40 0 2 124 6 128 7.88e-60 188
MS.gene017456.t1 AT3G01140 67.480 123 40 0 1 123 48 170 9.54e-60 192
MS.gene017456.t1 AT4G01680 67.480 123 40 0 2 124 6 128 4.12e-59 189
MS.gene017456.t1 AT1G74080 57.143 154 63 1 1 151 5 158 7.58e-59 188
MS.gene017456.t1 AT4G12350 58.784 148 59 2 1 146 5 152 9.36e-59 187
MS.gene017456.t1 AT4G22680 62.308 130 49 0 1 130 5 134 3.54e-58 184
MS.gene017456.t1 AT5G60890 64.228 123 44 0 1 123 5 127 1.16e-57 184
MS.gene017456.t1 AT3G61250 61.789 123 47 0 1 123 5 127 1.56e-57 184
MS.gene017456.t1 AT1G34670 62.602 123 46 0 1 123 5 127 2.45e-57 185
MS.gene017456.t1 AT1G18570 66.129 124 41 1 1 123 5 128 7.12e-57 184
MS.gene017456.t1 AT4G17785 63.710 124 44 1 1 123 5 128 1.16e-56 184
MS.gene017456.t1 AT4G17785 63.710 124 44 1 1 123 5 128 1.22e-56 183
MS.gene017456.t1 AT5G65230 60.976 123 48 0 1 123 5 127 1.67e-56 182
MS.gene017456.t1 AT5G10280 59.350 123 50 0 1 123 5 127 2.37e-56 182
MS.gene017456.t1 AT5G61420 61.789 123 47 0 1 123 5 127 5.04e-56 182
MS.gene017456.t1 AT5G62320 60.000 130 45 1 1 123 6 135 5.93e-56 178
MS.gene017456.t1 AT5G07690 63.415 123 45 0 1 123 5 127 1.20e-55 180
MS.gene017456.t1 AT4G01680 61.481 135 40 1 2 124 6 140 1.40e-55 180
MS.gene017456.t1 AT1G66230 61.789 123 47 0 1 123 5 127 2.26e-55 178
MS.gene017456.t1 AT3G12720 60.976 123 48 0 2 124 16 138 2.52e-55 179
MS.gene017456.t1 AT5G54230 53.459 159 70 2 8 166 12 166 2.92e-55 179
MS.gene017456.t1 AT5G07700 61.364 132 50 1 1 131 5 136 9.19e-55 178
MS.gene017456.t1 AT5G07700 61.364 132 50 1 1 131 5 136 9.19e-55 178
MS.gene017456.t1 AT5G56110 62.602 123 46 0 1 123 5 127 1.17e-54 177
MS.gene017456.t1 AT3G13890 66.964 112 37 0 2 113 6 117 1.42e-54 178
MS.gene017456.t1 AT5G16600 62.602 123 46 0 1 123 5 127 2.05e-54 177
MS.gene017456.t1 AT1G63910 58.519 135 49 2 2 136 6 133 5.95e-53 174
MS.gene017456.t1 AT5G49330 60.000 125 49 1 1 124 5 129 6.73e-52 171
MS.gene017456.t1 AT5G35550 68.182 110 35 0 5 114 11 120 7.05e-52 168
MS.gene017456.t1 AT2G47460 66.964 112 37 0 1 112 5 116 7.09e-52 171
MS.gene017456.t1 AT3G13890 61.983 121 37 1 2 113 6 126 1.80e-51 170
MS.gene017456.t1 AT3G62610 66.964 112 37 0 1 112 5 116 2.22e-51 169
MS.gene017456.t1 AT5G12870 64.815 108 38 0 8 115 18 125 2.45e-50 165
MS.gene017456.t1 AT1G74430 61.667 120 46 0 4 123 8 127 3.02e-50 164
MS.gene017456.t1 AT1G06180 63.393 112 41 0 1 112 5 116 4.62e-50 163
MS.gene017456.t1 AT3G28470 60.976 123 48 0 1 123 5 127 5.13e-50 165
MS.gene017456.t1 AT3G23250 58.929 112 46 0 1 112 5 116 2.76e-49 162
MS.gene017456.t1 AT1G56160 62.500 112 42 0 1 112 7 118 3.86e-49 162
MS.gene017456.t1 AT5G14750 65.049 103 36 0 10 112 18 120 4.57e-49 159
MS.gene017456.t1 AT3G47600 61.739 115 44 0 1 115 5 119 5.71e-49 163
MS.gene017456.t1 AT1G74650 61.739 115 44 0 1 115 5 119 8.59e-49 162
MS.gene017456.t1 AT5G14340 56.098 123 54 0 1 123 17 139 9.56e-49 160
MS.gene017456.t1 AT1G16490 60.714 112 44 0 1 112 7 118 1.14e-48 160
MS.gene017456.t1 AT2G31180 59.649 114 46 0 1 114 5 118 1.47e-48 159
MS.gene017456.t1 AT5G40330 64.078 103 37 0 10 112 14 116 5.32e-48 157
MS.gene017456.t1 AT3G28910 59.322 118 48 0 1 118 5 122 1.31e-47 159
MS.gene017456.t1 AT3G08500 63.303 109 40 0 4 112 26 134 2.55e-47 159
MS.gene017456.t1 AT1G79180 58.772 114 47 0 1 114 7 120 2.69e-47 157
MS.gene017456.t1 AT1G08810 61.017 118 46 0 1 118 5 122 3.06e-47 157
MS.gene017456.t1 AT5G62470 60.000 115 46 0 1 115 5 119 3.32e-47 159
MS.gene017456.t1 AT3G27920 59.821 112 43 1 4 113 8 119 2.70e-46 153
MS.gene017456.t1 AT5G23000 58.772 114 46 1 1 113 5 118 3.39e-46 155
MS.gene017456.t1 AT2G36890 54.400 125 56 1 1 124 5 129 5.54e-46 154
MS.gene017456.t1 AT2G36890 54.400 125 56 1 1 124 46 170 7.03e-46 155
MS.gene017456.t1 AT5G52600 61.682 107 41 0 5 111 9 115 7.40e-46 151
MS.gene017456.t1 AT5G65790 57.018 114 48 1 1 113 5 118 9.99e-46 155
MS.gene017456.t1 AT3G49690 57.895 114 47 1 1 113 5 118 1.14e-45 154
MS.gene017456.t1 AT5G62470 60.000 115 45 1 1 115 5 118 1.69e-45 154
MS.gene017456.t1 AT5G57620 57.018 114 48 1 1 113 5 118 1.90e-45 154
MS.gene017456.t1 AT3G12820 56.140 114 50 0 1 114 7 120 1.99e-45 151
MS.gene017456.t1 AT1G18710 56.667 120 52 0 4 123 8 127 5.15e-45 151
MS.gene017456.t1 AT3G01530 47.403 154 75 2 8 155 25 178 1.31e-44 148
MS.gene017456.t1 AT5G06100 59.259 108 44 0 4 111 28 135 3.81e-44 153
MS.gene017456.t1 AT5G06100 59.259 108 44 0 4 111 28 135 1.66e-43 152
MS.gene017456.t1 AT5G06100 59.259 108 44 0 4 111 28 135 1.66e-43 152
MS.gene017456.t1 AT5G06100 59.259 108 44 0 4 111 28 135 1.66e-43 152
MS.gene017456.t1 AT5G06100 59.259 108 44 0 4 111 28 135 1.66e-43 152
MS.gene017456.t1 AT3G24310 59.813 107 43 0 5 111 15 121 1.98e-43 147
MS.gene017456.t1 AT4G37780 45.033 151 82 1 1 150 5 155 6.57e-43 146
MS.gene017456.t1 AT5G40350 57.798 109 46 0 8 116 17 125 9.42e-43 143
MS.gene017456.t1 AT4G13480 59.813 107 43 0 5 111 3 109 1.88e-42 144
MS.gene017456.t1 AT3G11440 57.692 104 44 0 8 111 41 144 3.02e-42 148
MS.gene017456.t1 AT3G48920 47.692 130 63 1 5 134 15 139 5.83e-42 143
MS.gene017456.t1 AT3G11440 57.692 104 44 0 8 111 41 144 1.44e-41 148
MS.gene017456.t1 AT3G11440 57.692 104 44 0 8 111 41 144 1.44e-41 148
MS.gene017456.t1 AT3G11440 57.692 104 44 0 8 111 41 144 1.44e-41 148
MS.gene017456.t1 AT5G55020 56.364 110 47 1 8 117 26 134 2.05e-41 147
MS.gene017456.t1 AT2G26960 53.982 113 51 1 5 117 17 128 2.20e-41 145
MS.gene017456.t1 AT1G48000 53.390 118 53 1 8 123 32 149 2.34e-41 140
MS.gene017456.t1 AT5G26660 73.494 83 22 0 41 123 14 96 3.58e-41 142
MS.gene017456.t1 AT1G66370 60.577 104 41 0 8 111 8 111 4.15e-41 140
MS.gene017456.t1 AT4G25560 54.128 109 50 0 6 114 8 116 4.24e-41 141
MS.gene017456.t1 AT2G32460 57.692 104 44 0 8 111 6 109 7.58e-41 145
MS.gene017456.t1 AT2G32460 57.692 104 44 0 8 111 18 121 8.03e-41 145
MS.gene017456.t1 AT3G27810 56.190 105 46 0 8 112 20 124 1.42e-40 138
MS.gene017456.t1 AT1G79180 45.578 147 47 1 1 114 7 153 1.71e-40 141
MS.gene017456.t1 AT5G52260 55.455 110 49 0 5 114 9 118 4.69e-40 138
MS.gene017456.t1 AT2G47190 47.458 118 62 0 4 121 16 133 8.24e-40 137
MS.gene017456.t1 AT1G25340 52.174 115 55 0 10 124 20 134 1.68e-39 137
MS.gene017456.t1 AT3G53200 36.170 235 121 7 5 216 6 234 1.84e-39 135
MS.gene017456.t1 AT3G30210 57.426 101 43 0 10 110 29 129 2.76e-39 136
MS.gene017456.t1 AT4G26930 55.340 103 46 0 8 110 19 121 3.76e-39 139
MS.gene017456.t1 AT1G68320 48.438 128 66 0 6 133 17 144 8.00e-39 135
MS.gene017456.t1 AT1G66380 62.264 106 40 0 6 111 6 111 1.05e-38 130
MS.gene017456.t1 AT5G59780 52.336 107 51 0 5 111 5 111 4.37e-38 132
MS.gene017456.t1 AT3G46130 53.271 107 50 0 5 111 6 112 1.70e-37 131
MS.gene017456.t1 AT1G56650 62.500 104 39 0 8 111 8 111 2.54e-37 130
MS.gene017456.t1 AT1G71030 52.991 117 47 2 37 153 11 119 9.92e-37 127
MS.gene017456.t1 AT1G71030 55.140 107 42 1 47 153 5 105 1.89e-36 126
MS.gene017456.t1 AT1G66390 62.500 104 39 0 8 111 8 111 1.95e-36 128
MS.gene017456.t1 AT3G06490 49.587 121 61 0 4 124 15 135 2.68e-36 130
MS.gene017456.t1 AT5G49620 42.484 153 76 1 4 144 22 174 2.06e-35 127
MS.gene017456.t1 AT1G22640 73.239 71 19 0 54 124 1 71 2.15e-35 124
MS.gene017456.t1 AT1G25340 49.565 115 53 1 10 124 20 129 7.27e-35 125
MS.gene017456.t1 AT5G14750 73.913 69 18 0 44 112 18 86 7.38e-35 122
MS.gene017456.t1 AT5G35550 75.676 74 18 0 41 114 50 123 9.19e-35 124
MS.gene017456.t1 AT1G25340 49.565 115 53 1 10 124 20 129 1.39e-34 125
MS.gene017456.t1 AT3G60460 52.336 107 50 1 5 110 8 114 3.40e-32 119
MS.gene017456.t1 AT5G49620 39.394 165 74 2 4 142 22 186 1.11e-31 117
MS.gene017456.t1 AT2G26950 44.545 110 59 1 5 114 13 120 1.79e-31 118
MS.gene017456.t1 AT3G47600 68.000 75 24 0 41 115 39 113 2.16e-31 117
MS.gene017456.t1 AT3G53200 37.186 199 96 7 41 216 9 201 1.93e-30 111
MS.gene017456.t1 AT3G12820 63.380 71 26 0 44 114 2 72 1.03e-29 109
MS.gene017456.t1 AT1G66380 70.130 77 23 0 35 111 2 78 6.27e-29 104
MS.gene017456.t1 AT5G40350 60.526 76 30 0 41 116 5 80 9.20e-29 106
MS.gene017456.t1 AT3G46130 61.644 73 28 0 39 111 8 80 3.82e-28 106
MS.gene017456.t1 AT3G27785 47.664 107 55 1 5 111 184 289 8.04e-28 109
MS.gene017456.t1 AT5G59780 63.380 71 26 0 41 111 20 90 9.99e-28 105
MS.gene017456.t1 AT3G46130 63.380 71 26 0 41 111 20 90 1.23e-27 105
MS.gene017456.t1 AT5G58850 46.729 107 54 2 6 111 101 205 2.11e-27 108
MS.gene017456.t1 AT3G27810 59.722 72 29 0 41 112 4 75 2.61e-27 102
MS.gene017456.t1 AT5G11050 48.113 106 52 2 7 111 102 205 3.40e-27 107
MS.gene017456.t1 AT4G18770 44.545 110 60 1 5 114 212 320 3.80e-27 107
MS.gene017456.t1 AT1G18960 43.307 127 60 5 9 133 9 125 4.03e-27 105
MS.gene017456.t1 AT3G09230 49.057 106 53 1 10 115 55 159 4.82e-27 106
MS.gene017456.t1 AT4G37260 50.000 102 50 1 10 111 13 113 9.55e-27 104
MS.gene017456.t1 AT1G69560 32.828 198 103 5 5 174 118 313 2.40e-26 104
MS.gene017456.t1 AT1G69560 33.838 198 101 6 5 174 102 297 2.54e-26 103
MS.gene017456.t1 AT5G14750 69.492 59 18 0 54 112 1 59 4.02e-26 98.6
MS.gene017456.t1 AT5G14750 69.492 59 18 0 54 112 1 59 4.02e-26 98.6
MS.gene017456.t1 AT2G23290 50.980 102 49 1 10 111 13 113 5.57e-26 102
MS.gene017456.t1 AT5G40360 44.340 106 58 1 5 110 153 257 6.81e-26 103
MS.gene017456.t1 AT3G50060 47.059 102 53 1 10 111 6 106 9.98e-26 101
MS.gene017456.t1 AT2G39880 39.161 143 81 3 10 148 50 190 3.71e-25 101
MS.gene017456.t1 AT3G55730 49.533 107 51 2 10 115 56 160 3.78e-25 101
MS.gene017456.t1 AT4G32730 44.660 103 56 1 10 112 87 188 5.35e-25 102
MS.gene017456.t1 AT4G32730 44.660 103 56 1 10 112 87 188 5.35e-25 102
MS.gene017456.t1 AT4G32730 44.660 103 56 1 10 112 87 188 5.35e-25 102
MS.gene017456.t1 AT4G32730 44.660 103 56 1 10 112 87 188 5.35e-25 102
MS.gene017456.t1 AT4G32730 44.660 103 56 1 10 112 87 188 5.81e-25 102
MS.gene017456.t1 AT5G02320 43.689 103 57 1 10 112 127 228 5.93e-25 102
MS.gene017456.t1 AT5G02320 43.689 103 57 1 10 112 127 228 5.93e-25 102
MS.gene017456.t1 AT5G11510 43.689 103 57 1 10 112 81 182 8.03e-25 102
MS.gene017456.t1 AT5G11510 43.689 103 57 1 10 112 81 182 8.03e-25 102
MS.gene017456.t1 AT5G11510 43.689 103 57 1 10 112 81 182 8.03e-25 102
MS.gene017456.t1 AT5G02320 43.689 103 57 1 10 112 67 168 8.35e-25 101
MS.gene017456.t1 AT5G11510 43.689 103 57 1 10 112 81 182 1.06e-24 101
MS.gene017456.t1 AT5G11510 43.689 103 57 1 10 112 81 182 1.18e-24 101
MS.gene017456.t1 AT5G67300 47.059 102 53 1 10 111 6 106 1.43e-24 98.6
MS.gene017456.t1 AT1G26780 45.714 105 54 2 8 111 96 198 1.44e-24 98.2
MS.gene017456.t1 AT1G26780 45.283 106 55 2 8 112 96 199 2.76e-24 99.0
MS.gene017456.t1 AT3G09370 43.137 102 57 1 10 111 135 235 6.71e-24 99.0
MS.gene017456.t1 AT3G09370 43.137 102 57 1 10 111 130 230 6.99e-24 99.0
MS.gene017456.t1 AT3G23250 62.712 59 22 0 54 112 1 59 7.31e-24 95.1
MS.gene017456.t1 AT3G09370 43.137 102 57 1 10 111 143 243 1.09e-23 98.6
MS.gene017456.t1 AT2G25230 39.286 112 67 1 5 116 21 131 1.73e-23 94.4
MS.gene017456.t1 AT1G17950 44.660 103 54 2 10 111 5 105 2.95e-23 94.0
MS.gene017456.t1 AT1G66380 56.627 83 36 0 6 88 6 88 9.78e-23 89.0
MS.gene017456.t1 AT3G29020 35.417 144 82 3 10 143 65 207 1.13e-22 92.0
MS.gene017456.t1 AT3G29020 40.385 104 61 1 9 112 66 168 2.13e-22 92.8
MS.gene017456.t1 AT1G73410 45.631 103 53 2 10 111 6 106 1.02e-21 89.7
MS.gene017456.t1 AT1G73410 45.192 104 54 2 9 111 5 106 1.64e-21 88.6
MS.gene017456.t1 AT4G33450 42.593 108 59 2 5 111 14 119 5.87e-21 88.2
MS.gene017456.t1 AT5G17800 43.137 102 57 1 10 111 93 193 6.70e-21 89.0
MS.gene017456.t1 AT4G00540 38.393 112 65 2 7 115 100 210 3.87e-19 85.1
MS.gene017456.t1 AT4G00540 38.393 112 65 2 7 115 98 208 6.29e-19 84.7
MS.gene017456.t1 AT5G40430 35.714 112 70 2 5 116 49 158 7.08e-19 82.4
MS.gene017456.t1 AT1G22640 61.667 60 17 1 65 124 3 56 1.03e-18 80.5
MS.gene017456.t1 AT5G39700 39.000 100 60 1 11 110 57 155 2.08e-16 74.7
MS.gene017456.t1 AT5G61420 59.574 47 19 0 77 123 2 48 3.15e-15 73.2
MS.gene017456.t1 AT2G37630 37.895 95 57 1 13 105 7 101 3.61e-15 73.6
MS.gene017456.t1 AT1G14350 36.000 100 63 1 12 111 27 125 7.14e-15 73.2
MS.gene017456.t1 AT1G14350 36.000 100 63 1 12 111 27 125 7.14e-15 73.2
MS.gene017456.t1 AT4G28110 65.000 40 14 0 84 123 4 43 1.76e-14 69.7
MS.gene017456.t1 AT1G74650 65.116 43 15 0 73 115 1 43 2.40e-14 70.1
MS.gene017456.t1 AT2G02820 36.000 100 63 1 12 111 32 130 3.18e-14 71.2
MS.gene017456.t1 AT2G02820 37.895 95 58 1 12 106 32 125 3.31e-14 70.5
MS.gene017456.t1 AT2G02820 37.895 95 58 1 12 106 32 125 3.38e-14 71.2
MS.gene017456.t1 AT4G25560 52.000 50 24 0 65 114 1 50 3.42e-14 69.3
MS.gene017456.t1 AT5G15310 61.364 44 17 0 80 123 5 48 6.45e-14 68.9
MS.gene017456.t1 AT5G59780 64.286 42 15 0 70 111 5 46 7.90e-14 67.4
MS.gene017456.t1 AT3G46130 64.286 42 15 0 70 111 5 46 9.05e-14 67.4
MS.gene017456.t1 AT3G28910 60.870 46 18 0 73 118 1 46 1.30e-13 68.2
MS.gene017456.t1 AT4G01060 53.846 39 18 0 66 104 32 70 7.55e-12 59.3
MS.gene017456.t1 AT4G01060 53.846 39 18 0 66 104 35 73 7.64e-12 59.3
MS.gene017456.t1 AT4G01060 53.846 39 18 0 66 104 33 71 1.15e-11 58.9
MS.gene017456.t1 AT2G46410 43.860 57 25 1 67 123 39 88 3.44e-11 58.2
MS.gene017456.t1 AT1G01380 56.410 39 17 0 66 104 34 72 3.79e-11 57.8

Find 46 sgRNAs with CRISPR-Local

Find 92 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTGTAGTTTGTGATTATT+TGG 0.227146 5.1:-61905366 None:intergenic
TTACGTATAACAATCCTATT+TGG 0.254177 5.1:-61905591 None:intergenic
AAGATTCCACGTTTGATATC+TGG 0.258514 5.1:-61904509 None:intergenic
ATTAGTATTCTCTTTGTTCA+TGG 0.283964 5.1:-61905442 None:intergenic
TTGCTTTACCTTCTCCAAAT+AGG 0.293572 5.1:+61905577 MS.gene017456:CDS
AAGGAAACATCATTATTAAT+AGG 0.336354 5.1:-61905492 None:intergenic
ATTGATTATATACAAGTTCA+TGG 0.348949 5.1:+61904159 MS.gene017456:CDS
ATATCCATATCCCTAGTCTT+AGG 0.363929 5.1:-61905624 None:intergenic
GTCTCCTAAGACTAGGGATA+TGG 0.399312 5.1:+61905620 MS.gene017456:CDS
CTCATAGCTGGAAGGTTGCC+TGG 0.419326 5.1:+61905270 MS.gene017456:CDS
ATCGTTGTGGCAAAAGTTGT+AGG 0.443576 5.1:+61904462 MS.gene017456:CDS
ATCAAACTCCATGCCCTCCT+TGG 0.457574 5.1:+61904557 MS.gene017456:CDS
GGGCATGGAGTTTGATGATA+AGG 0.459629 5.1:-61904550 None:intergenic
ATTAGGTGGGCACTCATAGC+TGG 0.465821 5.1:+61905258 MS.gene017456:intron
GCAAAAGTTGTAGGCTAAGA+TGG 0.469351 5.1:+61904471 MS.gene017456:CDS
TTGTGGGTCTCCTAAGACTA+GGG 0.472979 5.1:+61905614 MS.gene017456:CDS
ACCTATTGCCAAGGAGGGCA+TGG 0.478073 5.1:-61904565 None:intergenic
AGGTGCATCACACGACTTGA+TGG 0.479168 5.1:-61905472 None:intergenic
AGGATTGTTATACGTAATTG+TGG 0.482364 5.1:+61905597 MS.gene017456:CDS
TCCATGCCCTCCTTGGCAAT+AGG 0.493745 5.1:+61904564 MS.gene017456:CDS
AGCTCCATTCCTAAGGCTGC+TGG 0.501089 5.1:+61904195 MS.gene017456:CDS
TGTAGTATCTTTCTTTGTGA+AGG 0.505587 5.1:-61905511 None:intergenic
GGATTGTTATACGTAATTGT+GGG 0.516800 5.1:+61905598 MS.gene017456:CDS
AACTAATTACCAGCAGCCTT+AGG 0.537734 5.1:-61904204 None:intergenic
AGTCCTCATGTTTCTACAGT+GGG 0.543370 5.1:+61905399 MS.gene017456:CDS
ACTTCATTATCTGTACGTCC+AGG 0.545099 5.1:-61905288 None:intergenic
AAGTTCATGGTGAAGGATGT+TGG 0.548057 5.1:+61904172 MS.gene017456:CDS
AAAACATCAACAAAGGTGCT+TGG 0.548391 5.1:+61904112 MS.gene017456:CDS
ATGTTGGAGCTCCATTCCTA+AGG 0.559617 5.1:+61904188 MS.gene017456:CDS
TATATACAAGTTCATGGTGA+AGG 0.571901 5.1:+61904165 MS.gene017456:CDS
TAGTCCTCATGTTTCTACAG+TGG 0.573941 5.1:+61905398 MS.gene017456:CDS
ATTGTGGGTCTCCTAAGACT+AGG 0.594392 5.1:+61905613 MS.gene017456:CDS
ATAACAATCCTATTTGGAGA+AGG 0.603362 5.1:-61905585 None:intergenic
ATTACCAGCAGCCTTAGGAA+TGG 0.607013 5.1:-61904199 None:intergenic
TGGTTAGGGTTACATCGTTG+TGG 0.613063 5.1:+61904449 MS.gene017456:intron
ATTTGGAGAAGGTAAAGCAA+TGG 0.617996 5.1:-61905574 None:intergenic
ACTGTAGAAACATGAGGACT+AGG 0.618608 5.1:-61905396 None:intergenic
GAGTAGGGTACCTATTGCCA+AGG 0.632183 5.1:-61904574 None:intergenic
GACAAAGAAAACATCAACAA+AGG 0.643163 5.1:+61904105 MS.gene017456:CDS
AGGGTACCTATTGCCAAGGA+GGG 0.644970 5.1:-61904570 None:intergenic
GGTTAAGTCAAGATTCAAAG+AGG 0.653013 5.1:-61905553 None:intergenic
GGTGGGCACTCATAGCTGGA+AGG 0.655708 5.1:+61905262 MS.gene017456:intron
TAGGGTACCTATTGCCAAGG+AGG 0.656434 5.1:-61904571 None:intergenic
AATAATCACAAACTACACAA+AGG 0.673384 5.1:+61905369 MS.gene017456:CDS
TTACGACCAGATATCAAACG+TGG 0.720036 5.1:+61904503 MS.gene017456:CDS
GTGCCCACTGTAGAAACATG+AGG 0.745131 5.1:-61905402 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTATAATCATTAATTAACTT+AGG - chr5.1:61905005-61905024 None:intergenic 15.0%
!! TAATATGTGTATTATTATCA+TGG + chr5.1:61904429-61904448 MS.gene017456:intron 15.0%
!! TATTTAAATTAGTATATGCT+CGG + chr5.1:61905104-61905123 MS.gene017456:intron 15.0%
!! TGAACAATTATAATTTGATT+AGG - chr5.1:61904809-61904828 None:intergenic 15.0%
!! TTGAAAATTAAAAATCTTGA+TGG - chr5.1:61904920-61904939 None:intergenic 15.0%
!!! ATCTTTTAAATAAGTCTATA+TGG + chr5.1:61904865-61904884 MS.gene017456:intron 15.0%
!!! GGAATTTTTTTTAACTTTAA+CGG - chr5.1:61904689-61904708 None:intergenic 15.0%
!! AAGGAAACATCATTATTAAT+AGG - chr5.1:61905495-61905514 None:intergenic 20.0%
!! ACAAACATATTTCCTTATAA+GGG - chr5.1:61905135-61905154 None:intergenic 20.0%
!! ATAATGAAGTGAAAAACTAT+TGG + chr5.1:61905301-61905320 MS.gene017456:CDS 20.0%
!! ATTGATTATATACAAGTTCA+TGG + chr5.1:61904159-61904178 MS.gene017456:CDS 20.0%
!! ATTTAAATTAGTATATGCTC+GGG + chr5.1:61905105-61905124 MS.gene017456:intron 20.0%
!! CACTAAATATAAGTTTGTAA+TGG - chr5.1:61904601-61904620 None:intergenic 20.0%
!! CGTAGAAAGTTAATAAAAAT+GGG + chr5.1:61905336-61905355 MS.gene017456:CDS 20.0%
!! TCGTAGAAAGTTAATAAAAA+TGG + chr5.1:61905335-61905354 MS.gene017456:CDS 20.0%
!! TTAATCAATATGAGAATTCA+TGG - chr5.1:61904280-61904299 None:intergenic 20.0%
!!! TCTTTGAAAAAATCCAAATT+CGG - chr5.1:61904841-61904860 None:intergenic 20.0%
! AATAATCACAAACTACACAA+AGG + chr5.1:61905369-61905388 MS.gene017456:CDS 25.0%
! ATATCGTTCTTCTTAATTCA+TGG + chr5.1:61904254-61904273 MS.gene017456:intron 25.0%
! ATTAGTATTCTCTTTGTTCA+TGG - chr5.1:61905445-61905464 None:intergenic 25.0%
! GACAAACATATTTCCTTATA+AGG - chr5.1:61905136-61905155 None:intergenic 25.0%
! GTGTATTATTATCATGGTTA+GGG + chr5.1:61904435-61904454 MS.gene017456:intron 25.0%
! TGTGTATTATTATCATGGTT+AGG + chr5.1:61904434-61904453 MS.gene017456:intron 25.0%
! TTACGTATAACAATCCTATT+TGG - chr5.1:61905594-61905613 None:intergenic 25.0%
! TTTGTACATGCATGTATATT+AGG + chr5.1:61905241-61905260 MS.gene017456:intron 25.0%
!! AAAAATCCAAATTCGGTTTT+TGG - chr5.1:61904834-61904853 None:intergenic 25.0%
!! AACTTTGATGATTCAAAACT+TGG + chr5.1:61904766-61904785 MS.gene017456:intron 25.0%
!! TCTTTGTTAATTCAAGTTCA+AGG + chr5.1:61904325-61904344 MS.gene017456:intron 25.0%
!! TTGTGTAGTTTGTGATTATT+TGG - chr5.1:61905369-61905388 None:intergenic 25.0%
!!! GTTTTAGTAGTATCATCTTT+TGG + chr5.1:61905166-61905185 MS.gene017456:intron 25.0%
AACATATTTCCTTATAAGGG+AGG - chr5.1:61905132-61905151 None:intergenic 30.0%
AAGTTCAAGGACTCTTTAAT+AGG + chr5.1:61904338-61904357 MS.gene017456:intron 30.0%
AGGATTGTTATACGTAATTG+TGG + chr5.1:61905597-61905616 MS.gene017456:CDS 30.0%
ATAACAATCCTATTTGGAGA+AGG - chr5.1:61905588-61905607 None:intergenic 30.0%
GACAAAGAAAACATCAACAA+AGG + chr5.1:61904105-61904124 MS.gene017456:CDS 30.0%
GGATTGTTATACGTAATTGT+GGG + chr5.1:61905598-61905617 MS.gene017456:CDS 30.0%
TACATGCATGTATATTAGGT+GGG + chr5.1:61905245-61905264 MS.gene017456:intron 30.0%
TATATACAAGTTCATGGTGA+AGG + chr5.1:61904165-61904184 MS.gene017456:CDS 30.0%
TGTAGTATCTTTCTTTGTGA+AGG - chr5.1:61905514-61905533 None:intergenic 30.0%
TTCAATCCAAAAACCGAATT+TGG + chr5.1:61904825-61904844 MS.gene017456:intron 30.0%
! ATAAGTTTGTAATGGAGAGT+AGG - chr5.1:61904593-61904612 None:intergenic 30.0%
! ATGTTTTCTTTGTCACAACA+AGG - chr5.1:61904099-61904118 None:intergenic 30.0%
! TAAGTTTGTAATGGAGAGTA+GGG - chr5.1:61904592-61904611 None:intergenic 30.0%
AAGATTCCACGTTTGATATC+TGG - chr5.1:61904512-61904531 None:intergenic 35.0%
ATTTGGAGAAGGTAAAGCAA+TGG - chr5.1:61905577-61905596 None:intergenic 35.0%
CTCCAAAAAGATTCACCTAA+AGG - chr5.1:61904723-61904742 None:intergenic 35.0%
GGTTAAGTCAAGATTCAAAG+AGG - chr5.1:61905556-61905575 None:intergenic 35.0%
GTACATGCATGTATATTAGG+TGG + chr5.1:61905244-61905263 MS.gene017456:intron 35.0%
TTGCTTTACCTTCTCCAAAT+AGG + chr5.1:61905577-61905596 MS.gene017456:CDS 35.0%
! ATATCCATATCCCTAGTCTT+AGG - chr5.1:61905627-61905646 None:intergenic 35.0%
! GTCCTTTAGGTGAATCTTTT+TGG + chr5.1:61904718-61904737 MS.gene017456:intron 35.0%
!! AAAACATCAACAAAGGTGCT+TGG + chr5.1:61904112-61904131 MS.gene017456:CDS 35.0%
!!! AATCTTTTTGGAGTTAACCC+CGG + chr5.1:61904730-61904749 MS.gene017456:intron 35.0%
AACTAATTACCAGCAGCCTT+AGG - chr5.1:61904207-61904226 None:intergenic 40.0%
AAGTTCATGGTGAAGGATGT+TGG + chr5.1:61904172-61904191 MS.gene017456:CDS 40.0%
AATCATCAAAGTTCTTCCCC+TGG - chr5.1:61904759-61904778 None:intergenic 40.0%
ACTGTAGAAACATGAGGACT+AGG - chr5.1:61905399-61905418 None:intergenic 40.0%
ACTTCATTATCTGTACGTCC+AGG - chr5.1:61905291-61905310 None:intergenic 40.0%
ATCGTTGTGGCAAAAGTTGT+AGG + chr5.1:61904462-61904481 MS.gene017456:CDS 40.0%
GCAAAAGTTGTAGGCTAAGA+TGG + chr5.1:61904471-61904490 MS.gene017456:CDS 40.0%
TTACGACCAGATATCAAACG+TGG + chr5.1:61904503-61904522 MS.gene017456:CDS 40.0%
TTCCAACGCATTAGTCCTTT+AGG + chr5.1:61904705-61904724 MS.gene017456:intron 40.0%
! AGTCCTCATGTTTCTACAGT+GGG + chr5.1:61905399-61905418 MS.gene017456:CDS 40.0%
! TAGTCCTCATGTTTCTACAG+TGG + chr5.1:61905398-61905417 MS.gene017456:CDS 40.0%
!!! ATCTTTTTGGAGTTAACCCC+GGG + chr5.1:61904731-61904750 MS.gene017456:intron 40.0%
ATGTTGGAGCTCCATTCCTA+AGG + chr5.1:61904188-61904207 MS.gene017456:CDS 45.0%
ATTACCAGCAGCCTTAGGAA+TGG - chr5.1:61904202-61904221 None:intergenic 45.0%
ATTGTGGGTCTCCTAAGACT+AGG + chr5.1:61905613-61905632 MS.gene017456:CDS 45.0%
CACCTAAAGGACTAATGCGT+TGG - chr5.1:61904710-61904729 None:intergenic 45.0%
GTCTCCTAAGACTAGGGATA+TGG + chr5.1:61905620-61905639 MS.gene017456:CDS 45.0%
TGGTTAGGGTTACATCGTTG+TGG + chr5.1:61904449-61904468 MS.gene017456:intron 45.0%
TTGTGGGTCTCCTAAGACTA+GGG + chr5.1:61905614-61905633 MS.gene017456:CDS 45.0%
! GGGCATGGAGTTTGATGATA+AGG - chr5.1:61904553-61904572 None:intergenic 45.0%
AAAGTTCTTCCCCTGGTTCC+CGG - chr5.1:61904752-61904771 None:intergenic 50.0%
AGGTGCATCACACGACTTGA+TGG - chr5.1:61905475-61905494 None:intergenic 50.0%
ATCAAACTCCATGCCCTCCT+TGG + chr5.1:61904557-61904576 MS.gene017456:CDS 50.0%
ATTAGGTGGGCACTCATAGC+TGG + chr5.1:61905258-61905277 MS.gene017456:intron 50.0%
GTGCCCACTGTAGAAACATG+AGG - chr5.1:61905405-61905424 None:intergenic 50.0%
! AGGGTACCTATTGCCAAGGA+GGG - chr5.1:61904573-61904592 None:intergenic 50.0%
! GAGTAGGGTACCTATTGCCA+AGG - chr5.1:61904577-61904596 None:intergenic 50.0%
! TAGGGTACCTATTGCCAAGG+AGG - chr5.1:61904574-61904593 None:intergenic 50.0%
AAGTTCTTCCCCTGGTTCCC+GGG - chr5.1:61904751-61904770 None:intergenic 55.0%
ACCTATTGCCAAGGAGGGCA+TGG - chr5.1:61904568-61904587 None:intergenic 55.0%
AGCTCCATTCCTAAGGCTGC+TGG + chr5.1:61904195-61904214 MS.gene017456:CDS 55.0%
CTCATAGCTGGAAGGTTGCC+TGG + chr5.1:61905270-61905289 MS.gene017456:CDS 55.0%
TCCATGCCCTCCTTGGCAAT+AGG + chr5.1:61904564-61904583 MS.gene017456:CDS 55.0%
TGCTCGGGTCCTCCCTTATA+AGG + chr5.1:61905120-61905139 MS.gene017456:intron 55.0%
AGTTCTTCCCCTGGTTCCCG+GGG - chr5.1:61904750-61904769 None:intergenic 60.0%
GAGTTAACCCCGGGAACCAG+GGG + chr5.1:61904740-61904759 MS.gene017456:intron 60.0%
GGAGTTAACCCCGGGAACCA+GGG + chr5.1:61904739-61904758 MS.gene017456:intron 60.0%
GGTGGGCACTCATAGCTGGA+AGG + chr5.1:61905262-61905281 MS.gene017456:intron 60.0%
TGGAGTTAACCCCGGGAACC+AGG + chr5.1:61904738-61904757 MS.gene017456:intron 60.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 61904096 61905662 61904096 ID=MS.gene017456
chr5.1 mRNA 61904096 61905662 61904096 ID=MS.gene017456.t1;Parent=MS.gene017456
chr5.1 exon 61904096 61904216 61904096 ID=MS.gene017456.t1.exon1;Parent=MS.gene017456.t1
chr5.1 CDS 61904096 61904216 61904096 ID=cds.MS.gene017456.t1;Parent=MS.gene017456.t1
chr5.1 exon 61904456 61904585 61904456 ID=MS.gene017456.t1.exon2;Parent=MS.gene017456.t1
chr5.1 CDS 61904456 61904585 61904456 ID=cds.MS.gene017456.t1;Parent=MS.gene017456.t1
chr5.1 exon 61905263 61905662 61905263 ID=MS.gene017456.t1.exon3;Parent=MS.gene017456.t1
chr5.1 CDS 61905263 61905662 61905263 ID=cds.MS.gene017456.t1;Parent=MS.gene017456.t1
Gene Sequence

>MS.gene017456

CCTTGTTGTGACAAAGAAAACATCAACAAAGGTGCTTGGTCTAAGCAAGAAGATCAAAAACTCATTGATTATATACAAGTTCATGGTGAAGGATGTTGGAGCTCCATTCCTAAGGCTGCTGGTAATTAGTTCATCATCTCATTGACTCATACTATATAATATCGTTCTTCTTAATTCATGGCCATGAATTCTCATATTGATTAAAATAGAGAAAATTTTAATTATTTTCTCTTTGTTAATTCAAGTTCAAGGACTCTTTAATAGGTTGCATAGTGTAACTCTTGCATATGATTCATATATACACAAATTAAATGTCTAATGATTAAAAGTGTGTAATATGTGTATTATTATCATGGTTAGGGTTACATCGTTGTGGCAAAAGTTGTAGGCTAAGATGGTTAAACTACTTACGACCAGATATCAAACGTGGAATCTTTGCACAAGATGAAGAAGACCTTATCATCAAACTCCATGCCCTCCTTGGCAATAGGTACCCTACTCTCCATTACAAACTTATATTTAGTGAATCATCATTTAGTCATGAATTATATATAGATTTTGATAATTTACTTTTTAAAGTTCTAATATAACCGTTAAAGTTAAAAAAAATTCCAACGCATTAGTCCTTTAGGTGAATCTTTTTGGAGTTAACCCCGGGAACCAGGGGAAGAACTTTGATGATTCAAAACTTGGTTGAGTGTTAAGTAAAACCTAATCAAATTATAATTGTTCAATCCAAAAACCGAATTTGGATTTTTTCAAAGAATTCATCTTTTAAATAAGTCTATATGGTCATTCAAGTTGTCTTTAAAAGACTAATACCATCAAGATTTTTAATTTTCAAAAATTATATTGTGCAGTTTTCTTAATTTTAGCGATCAAATTGTCATTTTCACAATTTTATATCCTAAGTTAATTAATGATTATACAAATGAAAAGTATATATTAATTTATTACAAAATGTAATTTTAATTTGTGCATGTTATAGATACATTGAAGTTATGTATATATTTAAATTAGTATATGCTCGGGTCCTCCCTTATAAGGAAATATGTTTGTCTTTGTTATCAGTTTTAGTAGTATCATCTTTTGGTAATGAATTTAATTTATAAAGTTGTACTCTTGATTCAAAAAAACTTATATAGTTTGTACATGCATGTATATTAGGTGGGCACTCATAGCTGGAAGGTTGCCTGGACGTACAGATAATGAAGTGAAAAACTATTGGAATTCTCATATTCGTAGAAAGTTAATAAAAATGGGAATTGATCCAAATAATCACAAACTACACAAAGGCTTTCCTAGTCCTCATGTTTCTACAGTGGGCACATCATCATGTGTTGAGTCCATGAACAAAGAGAATACTAATAAACTCTCCATCAAGTCGTGTGATGCACCTATTAATAATGATGTTTCCTTCACAAAGAAAGATACTACATCAATAATTAATTCTTCATCCTCTTTGAATCTTGACTTAACCATTGCTTTACCTTCTCCAAATAGGATTGTTATACGTAATTGTGGGTCTCCTAAGACTAGGGATATGGATATTGATCTTAATTGTTAA
Protein sequence

>MS.gene017456.t1

PCCDKENINKGAWSKQEDQKLIDYIQVHGEGCWSSIPKAAGLHRCGKSCRLRWLNYLRPDIKRGIFAQDEEDLIIKLHALLGNRWALIAGRLPGRTDNEVKNYWNSHIRRKLIKMGIDPNNHKLHKGFPSPHVSTVGTSSCVESMNKENTNKLSIKSCDAPINNDVSFTKKDTTSIINSSSSLNLDLTIALPSPNRIVIRNCGSPKTRDMDIDLNC