AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene017671

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene017671.t1 MTR_3g012010 28.767 219 136 7 78 287 98 305 1.17e-14 73.2
MS.gene017671.t1 MTR_2g067740 40.816 98 51 4 78 168 59 156 5.13e-14 70.1
MS.gene017671.t1 MTR_8g466760 28.814 236 106 12 78 287 98 297 1.69e-13 69.7
MS.gene017671.t1 MTR_3g009410 27.074 229 127 7 78 287 98 305 5.90e-12 65.5
MS.gene017671.t1 MTR_7g026977 44.286 70 29 2 78 137 148 217 7.83e-12 65.5
MS.gene017671.t1 MTR_5g008280 40.449 89 35 3 77 157 45 123 8.69e-12 65.5
MS.gene017671.t1 MTR_3g011990 27.660 235 109 8 78 287 98 296 1.38e-11 64.3
MS.gene017671.t1 MTR_1g033340 41.509 106 46 6 11 110 34 129 3.15e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene017671.t1 AT5G25160 40.000 105 45 3 78 182 59 145 3.55e-11 62.4

Find 98 sgRNAs with CRISPR-Local

Find 101 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTTGGGATGAATAATTTA+TGG 0.162779 7.2:+19837975 MS.gene017671:CDS
TCCCTTGCAACACCACAATT+TGG 0.181385 7.2:+19837959 MS.gene017671:CDS
TGAACAATTCCTTGCCTTCT+TGG 0.192209 7.2:+19837846 MS.gene017671:CDS
TGGCTTGGTGGTTCATCTTC+TGG 0.227050 7.2:+19837866 MS.gene017671:CDS
CGTGACGCAGGAGGTGTATT+TGG 0.248631 7.2:-19837911 None:intergenic
TCAGAAGATGCCTCAGAAAT+TGG 0.273890 7.2:-19838085 None:intergenic
CTGTCATCTTCATCTTCAAT+AGG 0.321326 7.2:-19838151 None:intergenic
TTGGAGAATGGTGAGCATTC+AGG 0.322095 7.2:+19837524 MS.gene017671:CDS
CAAGTTCAGTTCCTCCTCAT+TGG 0.324355 7.2:-19838188 None:intergenic
AATTCCTTGCCTTCTTGGCT+TGG 0.353374 7.2:+19837851 MS.gene017671:CDS
CCCTTGCAACACCACAATTT+GGG 0.353563 7.2:+19837960 MS.gene017671:CDS
GAGGTTGGTGGTGATGTCTT+TGG 0.357363 7.2:-19837434 None:intergenic
ATTTGGGATGAATAATTTAT+GGG 0.357825 7.2:+19837976 MS.gene017671:CDS
AAGTTCAGTTCCTCCTCATT+GGG 0.363891 7.2:-19838187 None:intergenic
TCCTTGCCTTCTTGGCTTGG+TGG 0.368207 7.2:+19837854 MS.gene017671:CDS
CTCACCATTCTCCAAGGGTT+TGG 0.371444 7.2:-19837516 None:intergenic
GAGATCAAACACTGTGGGTT+TGG 0.396502 7.2:+19838033 MS.gene017671:CDS
GGTTCATCTTCTGGTGGCTA+TGG 0.403832 7.2:+19837875 MS.gene017671:CDS
TGTTCACATGGGAACCAATT+GGG 0.426738 7.2:-19837829 None:intergenic
TTCCCCACTTCTCAAGCGCT+TGG 0.427846 7.2:+19837626 MS.gene017671:CDS
GAATATTAGATCGATACCTT+AGG 0.431642 7.2:-19837730 None:intergenic
GCGCAAAATGATGGAGGATT+CGG 0.431644 7.2:+19837385 MS.gene017671:CDS
TTGTTCACATGGGAACCAAT+TGG 0.439864 7.2:-19837830 None:intergenic
AATTCCTTCACTTGCGGCAC+AGG 0.441324 7.2:-19837578 None:intergenic
CAATGAGGAGGAACTGAACT+TGG 0.445260 7.2:+19838189 MS.gene017671:CDS
TTCACTTGCGGCACAGGTGG+AGG 0.445355 7.2:-19837572 None:intergenic
GGAGAGCTTGAAAATTGATA+AGG 0.446609 7.2:-19837761 None:intergenic
GATTTCTTGACCTTGAGGCT+TGG 0.452474 7.2:+19837473 MS.gene017671:CDS
GCTCACGCTTATGAGCGTTT+TGG 0.454295 7.2:-19837655 None:intergenic
TTCTTGACCTTGAGGCTTGG+CGG 0.462476 7.2:+19837476 MS.gene017671:CDS
CCCACTTCTCAAGCGCTTGG+AGG 0.464114 7.2:+19837629 MS.gene017671:CDS
TCATCTTCTGGTGGCTATGG+AGG 0.469395 7.2:+19837878 MS.gene017671:CDS
CCAACCTCTGGATCGGATGC+TGG 0.471452 7.2:+19837449 MS.gene017671:CDS
ATTCTCCAAGGGTTTGGAAG+TGG 0.473353 7.2:-19837510 None:intergenic
GAGAGCTTGAAAATTGATAA+GGG 0.474183 7.2:-19837760 None:intergenic
AAACCTCAAGCGCAAAATGA+TGG 0.477017 7.2:+19837376 MS.gene017671:CDS
CTTGAAAATTGATAAGGGTA+TGG 0.487010 7.2:-19837755 None:intergenic
TTCGGAGCAAGAGTCGAAAT+CGG 0.492293 7.2:+19837403 MS.gene017671:CDS
AATTTCTGAGGCATCTTCTG+AGG 0.495312 7.2:+19838087 MS.gene017671:CDS
TCCTTCACTTGCGGCACAGG+TGG 0.495412 7.2:-19837575 None:intergenic
AAGACATCACCACCAACCTC+TGG 0.499816 7.2:+19837437 MS.gene017671:CDS
TCCCAAATTGTGGTGTTGCA+AGG 0.499889 7.2:-19837961 None:intergenic
GCTAGCCTGTCCAACCCAAT+TGG 0.500395 7.2:+19837815 MS.gene017671:CDS
TTCTCCAAGGGTTTGGAAGT+GGG 0.501108 7.2:-19837509 None:intergenic
AATATTAGATCGATACCTTA+GGG 0.503430 7.2:-19837729 None:intergenic
CATCTTCTGGTGGCTATGGA+GGG 0.505349 7.2:+19837879 MS.gene017671:CDS
GGGAACCAATTGGGTTGGAC+AGG 0.508826 7.2:-19837820 None:intergenic
ACTTCCAAACCCTTGGAGAA+TGG 0.510882 7.2:+19837512 MS.gene017671:CDS
TCCTCCAAGCGCTTGAGAAG+TGG 0.512717 7.2:-19837630 None:intergenic
GATGAACCACCAAGCCAAGA+AGG 0.518609 7.2:-19837860 None:intergenic
CACATGGGAACCAATTGGGT+TGG 0.519779 7.2:-19837825 None:intergenic
GCAAGAGTCGAAATCGGAGA+AGG 0.519914 7.2:+19837409 MS.gene017671:CDS
AAATCCCACTTCCAAACCCT+TGG 0.521354 7.2:+19837505 MS.gene017671:CDS
GAAGATGCCTCAGAAATTGG+AGG 0.529710 7.2:-19838082 None:intergenic
CTGGCGATTTCTTGACCTTG+AGG 0.533323 7.2:+19837468 MS.gene017671:CDS
TTGACCTTGAGGCTTGGCGG+TGG 0.537816 7.2:+19837479 MS.gene017671:CDS
CCTCCAAGCGCTTGAGAAGT+GGG 0.545861 7.2:-19837629 None:intergenic
TACGGAAATATGAATACCCT+TGG 0.547864 7.2:-19837790 None:intergenic
ATGAATAATTTATGGGGTGG+AGG 0.548808 7.2:+19837983 MS.gene017671:CDS
GGGATGAATAATTTATGGGG+TGG 0.553703 7.2:+19837980 MS.gene017671:CDS
CTTGGTGGTTCATCTTCTGG+TGG 0.555595 7.2:+19837869 MS.gene017671:CDS
AATGGAAGAACAAAGGAGAG+AGG 0.557192 7.2:+19837691 MS.gene017671:CDS
TATGAATACCCTTGGTAGTG+TGG 0.561783 7.2:-19837782 None:intergenic
CCCAAATTGTGGTGTTGCAA+GGG 0.562024 7.2:-19837960 None:intergenic
TCCACCTGTGCCGCAAGTGA+AGG 0.562222 7.2:+19837574 MS.gene017671:CDS
AAATTATTCATCCCAAATTG+TGG 0.569543 7.2:-19837971 None:intergenic
TGAATGCTCACCATTCTCCA+AGG 0.576662 7.2:-19837522 None:intergenic
ACCACCAAGCCAAGAAGGCA+AGG 0.577515 7.2:-19837855 None:intergenic
GTGTTTGATCTCTGTGGAGT+TGG 0.579156 7.2:-19838022 None:intergenic
ATGTGATCGATTCAGCCCTA+AGG 0.581100 7.2:+19837714 MS.gene017671:CDS
CAAGCTCTCCACACTACCAA+GGG 0.581296 7.2:+19837774 MS.gene017671:CDS
ATCACCACCAACCTCTGGAT+CGG 0.589780 7.2:+19837442 MS.gene017671:CDS
GAATGCTCACCATTCTCCAA+GGG 0.590384 7.2:-19837521 None:intergenic
CCAGCATCCGATCCAGAGGT+TGG 0.592460 7.2:-19837449 None:intergenic
CAAGAGAATTCCTTCACTTG+CGG 0.593057 7.2:-19837584 None:intergenic
TCAAGCTCTCCACACTACCA+AGG 0.596295 7.2:+19837773 MS.gene017671:CDS
TTTGGGATGAATAATTTATG+GGG 0.599177 7.2:+19837977 MS.gene017671:CDS
TGTGCCACCGCCAAGCCTCA+AGG 0.601323 7.2:-19837483 None:intergenic
AAGATGCCTCAGAAATTGGA+GGG 0.602431 7.2:-19838081 None:intergenic
GCATCCGATCCAGAGGTTGG+TGG 0.602933 7.2:-19837446 None:intergenic
GGCATCACAAATCGTGACGC+AGG 0.604137 7.2:-19837923 None:intergenic
AAGGCAAGGAATTGTTCACA+TGG 0.612872 7.2:-19837841 None:intergenic
AGATGAAGATGACAGAAATG+AGG 0.616572 7.2:+19838159 MS.gene017671:CDS
GGTTGGACAGGCTAGCACTA+CGG 0.617508 7.2:-19837808 None:intergenic
ATCGCCAGCATCCGATCCAG+AGG 0.630563 7.2:-19837453 None:intergenic
CTCCAAGCGCTTGAGAAGTG+GGG 0.636012 7.2:-19837628 None:intergenic
TCAAACCCCTCCAATTTCTG+AGG 0.642241 7.2:+19838075 MS.gene017671:CDS
CCACAGAGATCAAACACTGT+GGG 0.643895 7.2:+19838028 MS.gene017671:CDS
CCCACAGTGTTTGATCTCTG+TGG 0.650296 7.2:-19838028 None:intergenic
ATCACAAATCGTGACGCAGG+AGG 0.651769 7.2:-19837920 None:intergenic
AGATGCCTCAGAAATTGGAG+GGG 0.652285 7.2:-19838080 None:intergenic
TGAGGCTAATCCCAATGAGG+AGG 0.655080 7.2:+19838177 MS.gene017671:CDS
CCTCAAGCGCAAAATGATGG+AGG 0.656497 7.2:+19837379 MS.gene017671:CDS
GCAAGGGATGAATTTGACAA+TGG 0.667223 7.2:-19837944 None:intergenic
TCTTCAATAGGATCATGAGA+AGG 0.673021 7.2:-19838139 None:intergenic
AAATGAGGCTAATCCCAATG+AGG 0.702908 7.2:+19838174 MS.gene017671:CDS
AGGCAAGGAATTGTTCACAT+GGG 0.705162 7.2:-19837840 None:intergenic
TCCACAGAGATCAAACACTG+TGG 0.733122 7.2:+19838027 MS.gene017671:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTGGGATGAATAATTTA+TGG + chr7.2:19837975-19837994 MS.gene017671:CDS 20.0%
!!! ATTTGGGATGAATAATTTAT+GGG + chr7.2:19837976-19837995 MS.gene017671:CDS 20.0%
! AAATTATTCATCCCAAATTG+TGG - chr7.2:19837974-19837993 None:intergenic 25.0%
! AATATTAGATCGATACCTTA+GGG - chr7.2:19837732-19837751 None:intergenic 25.0%
! TCAAAAAAATGGAAGAACAA+AGG + chr7.2:19837684-19837703 MS.gene017671:CDS 25.0%
!! TTTGGGATGAATAATTTATG+GGG + chr7.2:19837977-19837996 MS.gene017671:CDS 25.0%
CTTGAAAATTGATAAGGGTA+TGG - chr7.2:19837758-19837777 None:intergenic 30.0%
GAATATTAGATCGATACCTT+AGG - chr7.2:19837733-19837752 None:intergenic 30.0%
GAGAGCTTGAAAATTGATAA+GGG - chr7.2:19837763-19837782 None:intergenic 30.0%
AGATGAAGATGACAGAAATG+AGG + chr7.2:19838159-19838178 MS.gene017671:CDS 35.0%
ATGAATAATTTATGGGGTGG+AGG + chr7.2:19837983-19838002 MS.gene017671:CDS 35.0%
CTGTCATCTTCATCTTCAAT+AGG - chr7.2:19838154-19838173 None:intergenic 35.0%
GGAGAGCTTGAAAATTGATA+AGG - chr7.2:19837764-19837783 None:intergenic 35.0%
TACGGAAATATGAATACCCT+TGG - chr7.2:19837793-19837812 None:intergenic 35.0%
TCTTCAATAGGATCATGAGA+AGG - chr7.2:19838142-19838161 None:intergenic 35.0%
TGAGCGTGTCTTCAAAAAAA+TGG + chr7.2:19837673-19837692 MS.gene017671:CDS 35.0%
AAACCTCAAGCGCAAAATGA+TGG + chr7.2:19837376-19837395 MS.gene017671:CDS 40.0%
AAATGAGGCTAATCCCAATG+AGG + chr7.2:19838174-19838193 MS.gene017671:CDS 40.0%
AAGATGCCTCAGAAATTGGA+GGG - chr7.2:19838084-19838103 None:intergenic 40.0%
AAGGCAAGGAATTGTTCACA+TGG - chr7.2:19837844-19837863 None:intergenic 40.0%
AAGTTCAGTTCCTCCTCATT+GGG - chr7.2:19838190-19838209 None:intergenic 40.0%
AATGGAAGAACAAAGGAGAG+AGG + chr7.2:19837691-19837710 MS.gene017671:CDS 40.0%
AGGCAAGGAATTGTTCACAT+GGG - chr7.2:19837843-19837862 None:intergenic 40.0%
CAAGAGAATTCCTTCACTTG+CGG - chr7.2:19837587-19837606 None:intergenic 40.0%
GCAAGGGATGAATTTGACAA+TGG - chr7.2:19837947-19837966 None:intergenic 40.0%
GGGATGAATAATTTATGGGG+TGG + chr7.2:19837980-19837999 MS.gene017671:CDS 40.0%
TCAGAAGATGCCTCAGAAAT+TGG - chr7.2:19838088-19838107 None:intergenic 40.0%
TGAACAATTCCTTGCCTTCT+TGG + chr7.2:19837846-19837865 MS.gene017671:CDS 40.0%
TGTTCACATGGGAACCAATT+GGG - chr7.2:19837832-19837851 None:intergenic 40.0%
TTGTTCACATGGGAACCAAT+TGG - chr7.2:19837833-19837852 None:intergenic 40.0%
!! AATTTCTGAGGCATCTTCTG+AGG + chr7.2:19838087-19838106 MS.gene017671:CDS 40.0%
!! TATGAATACCCTTGGTAGTG+TGG - chr7.2:19837785-19837804 None:intergenic 40.0%
AAATCCCACTTCCAAACCCT+TGG + chr7.2:19837505-19837524 MS.gene017671:CDS 45.0%
AATTCCTTGCCTTCTTGGCT+TGG + chr7.2:19837851-19837870 MS.gene017671:CDS 45.0%
ACTTCCAAACCCTTGGAGAA+TGG + chr7.2:19837512-19837531 MS.gene017671:CDS 45.0%
AGATGCCTCAGAAATTGGAG+GGG - chr7.2:19838083-19838102 None:intergenic 45.0%
ATTCTCCAAGGGTTTGGAAG+TGG - chr7.2:19837513-19837532 None:intergenic 45.0%
CAAGTTCAGTTCCTCCTCAT+TGG - chr7.2:19838191-19838210 None:intergenic 45.0%
CAATGAGGAGGAACTGAACT+TGG + chr7.2:19838189-19838208 MS.gene017671:CDS 45.0%
CCACAGAGATCAAACACTGT+GGG + chr7.2:19838028-19838047 MS.gene017671:CDS 45.0%
CCCTTGCAACACCACAATTT+GGG + chr7.2:19837960-19837979 MS.gene017671:CDS 45.0%
GAAGATGCCTCAGAAATTGG+AGG - chr7.2:19838085-19838104 None:intergenic 45.0%
GAATGCTCACCATTCTCCAA+GGG - chr7.2:19837524-19837543 None:intergenic 45.0%
GAGATCAAACACTGTGGGTT+TGG + chr7.2:19838033-19838052 MS.gene017671:CDS 45.0%
GATTTCTTGACCTTGAGGCT+TGG + chr7.2:19837473-19837492 MS.gene017671:CDS 45.0%
GTGTTTGATCTCTGTGGAGT+TGG - chr7.2:19838025-19838044 None:intergenic 45.0%
TCAAACCCCTCCAATTTCTG+AGG + chr7.2:19838075-19838094 MS.gene017671:CDS 45.0%
TCCACAGAGATCAAACACTG+TGG + chr7.2:19838027-19838046 MS.gene017671:CDS 45.0%
TCCCTTGCAACACCACAATT+TGG + chr7.2:19837959-19837978 MS.gene017671:CDS 45.0%
TGAATGCTCACCATTCTCCA+AGG - chr7.2:19837525-19837544 None:intergenic 45.0%
TTCGGAGCAAGAGTCGAAAT+CGG + chr7.2:19837403-19837422 MS.gene017671:CDS 45.0%
TTCTCCAAGGGTTTGGAAGT+GGG - chr7.2:19837512-19837531 None:intergenic 45.0%
TTGGAGAATGGTGAGCATTC+AGG + chr7.2:19837524-19837543 MS.gene017671:CDS 45.0%
! ATGTGATCGATTCAGCCCTA+AGG + chr7.2:19837714-19837733 MS.gene017671:CDS 45.0%
! GCGCAAAATGATGGAGGATT+CGG + chr7.2:19837385-19837404 MS.gene017671:CDS 45.0%
!! CCCAAATTGTGGTGTTGCAA+GGG - chr7.2:19837963-19837982 None:intergenic 45.0%
!! TCCCAAATTGTGGTGTTGCA+AGG - chr7.2:19837964-19837983 None:intergenic 45.0%
AAGACATCACCACCAACCTC+TGG + chr7.2:19837437-19837456 MS.gene017671:CDS 50.0%
AATTCCTTCACTTGCGGCAC+AGG - chr7.2:19837581-19837600 None:intergenic 50.0%
ATCACAAATCGTGACGCAGG+AGG - chr7.2:19837923-19837942 None:intergenic 50.0%
ATCACCACCAACCTCTGGAT+CGG + chr7.2:19837442-19837461 MS.gene017671:CDS 50.0%
CAAGCTCTCCACACTACCAA+GGG + chr7.2:19837774-19837793 MS.gene017671:CDS 50.0%
CACATGGGAACCAATTGGGT+TGG - chr7.2:19837828-19837847 None:intergenic 50.0%
CATCTTCTGGTGGCTATGGA+GGG + chr7.2:19837879-19837898 MS.gene017671:CDS 50.0%
CCCACAGTGTTTGATCTCTG+TGG - chr7.2:19838031-19838050 None:intergenic 50.0%
CCTCAAGCGCAAAATGATGG+AGG + chr7.2:19837379-19837398 MS.gene017671:CDS 50.0%
CTCACCATTCTCCAAGGGTT+TGG - chr7.2:19837519-19837538 None:intergenic 50.0%
CTGGCGATTTCTTGACCTTG+AGG + chr7.2:19837468-19837487 MS.gene017671:CDS 50.0%
GATGAACCACCAAGCCAAGA+AGG - chr7.2:19837863-19837882 None:intergenic 50.0%
GCAAGAGTCGAAATCGGAGA+AGG + chr7.2:19837409-19837428 MS.gene017671:CDS 50.0%
GGTTCATCTTCTGGTGGCTA+TGG + chr7.2:19837875-19837894 MS.gene017671:CDS 50.0%
TCAAGCTCTCCACACTACCA+AGG + chr7.2:19837773-19837792 MS.gene017671:CDS 50.0%
TCATCTTCTGGTGGCTATGG+AGG + chr7.2:19837878-19837897 MS.gene017671:CDS 50.0%
TGAGGCTAATCCCAATGAGG+AGG + chr7.2:19838177-19838196 MS.gene017671:CDS 50.0%
TTCTTGACCTTGAGGCTTGG+CGG + chr7.2:19837476-19837495 MS.gene017671:CDS 50.0%
! CCTCCATCATTTTGCGCTTG+AGG - chr7.2:19837382-19837401 None:intergenic 50.0%
! CTTGGTGGTTCATCTTCTGG+TGG + chr7.2:19837869-19837888 MS.gene017671:CDS 50.0%
! GCTCACGCTTATGAGCGTTT+TGG - chr7.2:19837658-19837677 None:intergenic 50.0%
!! GAGGTTGGTGGTGATGTCTT+TGG - chr7.2:19837437-19837456 None:intergenic 50.0%
!! TGGCTTGGTGGTTCATCTTC+TGG + chr7.2:19837866-19837885 MS.gene017671:CDS 50.0%
ACCACCAAGCCAAGAAGGCA+AGG - chr7.2:19837858-19837877 None:intergenic 55.0%
CCTCCAAGCGCTTGAGAAGT+GGG - chr7.2:19837632-19837651 None:intergenic 55.0%
CTCCAAGCGCTTGAGAAGTG+GGG - chr7.2:19837631-19837650 None:intergenic 55.0%
GGCATCACAAATCGTGACGC+AGG - chr7.2:19837926-19837945 None:intergenic 55.0%
GGTTGGACAGGCTAGCACTA+CGG - chr7.2:19837811-19837830 None:intergenic 55.0%
TCCTCCAAGCGCTTGAGAAG+TGG - chr7.2:19837633-19837652 None:intergenic 55.0%
TTCCCCACTTCTCAAGCGCT+TGG + chr7.2:19837626-19837645 MS.gene017671:CDS 55.0%
! CGTGACGCAGGAGGTGTATT+TGG - chr7.2:19837914-19837933 None:intergenic 55.0%
! GCTAGCCTGTCCAACCCAAT+TGG + chr7.2:19837815-19837834 MS.gene017671:CDS 55.0%
!! GGGAACCAATTGGGTTGGAC+AGG - chr7.2:19837823-19837842 None:intergenic 55.0%
!! TCCTTGCCTTCTTGGCTTGG+TGG + chr7.2:19837854-19837873 MS.gene017671:CDS 55.0%
ATCGCCAGCATCCGATCCAG+AGG - chr7.2:19837456-19837475 None:intergenic 60.0%
CCAACCTCTGGATCGGATGC+TGG + chr7.2:19837449-19837468 MS.gene017671:CDS 60.0%
CCAGCATCCGATCCAGAGGT+TGG - chr7.2:19837452-19837471 None:intergenic 60.0%
CCCACTTCTCAAGCGCTTGG+AGG + chr7.2:19837629-19837648 MS.gene017671:CDS 60.0%
GCATCCGATCCAGAGGTTGG+TGG - chr7.2:19837449-19837468 None:intergenic 60.0%
TCCACCTGTGCCGCAAGTGA+AGG + chr7.2:19837574-19837593 MS.gene017671:CDS 60.0%
TCCTTCACTTGCGGCACAGG+TGG - chr7.2:19837578-19837597 None:intergenic 60.0%
TTCACTTGCGGCACAGGTGG+AGG - chr7.2:19837575-19837594 None:intergenic 60.0%
TTGACCTTGAGGCTTGGCGG+TGG + chr7.2:19837479-19837498 MS.gene017671:CDS 60.0%
TGTGCCACCGCCAAGCCTCA+AGG - chr7.2:19837486-19837505 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 19837362 19838225 19837362 ID=MS.gene017671
chr7.2 mRNA 19837362 19838225 19837362 ID=MS.gene017671.t1;Parent=MS.gene017671
chr7.2 exon 19837362 19838225 19837362 ID=MS.gene017671.t1.exon1;Parent=MS.gene017671.t1
chr7.2 CDS 19837362 19838225 19837362 ID=cds.MS.gene017671.t1;Parent=MS.gene017671.t1
Gene Sequence

>MS.gene017671

ATGGCTGAGGACAAAAACCTCAAGCGCAAAATGATGGAGGATTCGGAGCAAGAGTCGAAATCGGAGAAGGAGCCAAAGACATCACCACCAACCTCTGGATCGGATGCTGGCGATTTCTTGACCTTGAGGCTTGGCGGTGGCACAAATCCCACTTCCAAACCCTTGGAGAATGGTGAGCATTCAGGTTCATCTCAAACTGCTAATGTTGAACCTCCACCTGTGCCGCAAGTGAAGGAATTCTCTTGTACTTATTGTGACAAGAAATTCCCCACTTCTCAAGCGCTTGGAGGACACCAAAACGCTCATAAGCGTGAGCGTGTCTTCAAAAAAATGGAAGAACAAAGGAGAGAGGATGTGATCGATTCAGCCCTAAGGTATCGATCTAATATTCTTCCATACCCTTATCAATTTTCAAGCTCTCCACACTACCAAGGGTATTCATATTTCCGTAGTGCTAGCCTGTCCAACCCAATTGGTTCCCATGTGAACAATTCCTTGCCTTCTTGGCTTGGTGGTTCATCTTCTGGTGGCTATGGAGGGATGTATATGCCAAATACACCTCCTGCGTCACGATTTGTGATGCCATTGTCAAATTCATCCCTTGCAACACCACAATTTGGGATGAATAATTTATGGGGTGGAGGTCAAAATGCTGCATTACCAACTCCACAGAGATCAAACACTGTGGGTTTGGCACTTTTAGCTCAAGCTAATCAAACCCCTCCAATTTCTGAGGCATCTTCTGAGGCTGTAGAAAGAAATTTCATTGATCAAATTCCTTCTCATGATCCTATTGAAGATGAAGATGACAGAAATGAGGCTAATCCCAATGAGGAGGAACTGAACTTGGAACTCACCCTTTAA
Protein sequence

>MS.gene017671.t1

MAEDKNLKRKMMEDSEQESKSEKEPKTSPPTSGSDAGDFLTLRLGGGTNPTSKPLENGEHSGSSQTANVEPPPVPQVKEFSCTYCDKKFPTSQALGGHQNAHKRERVFKKMEEQRREDVIDSALRYRSNILPYPYQFSSSPHYQGYSYFRSASLSNPIGSHVNNSLPSWLGGSSSGGYGGMYMPNTPPASRFVMPLSNSSLATPQFGMNNLWGGGQNAALPTPQRSNTVGLALLAQANQTPPISEASSEAVERNFIDQIPSHDPIEDEDDRNEANPNEEELNLELTL