Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene017699.t1 | ABN08552.1 | 96.5 | 454 | 14 | 1 | 1 | 454 | 1 | 452 | 1.50E-249 | 871.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene017699.t1 | Q9FF61 | 57.7 | 489 | 157 | 7 | 1 | 454 | 42 | 515 | 3.8e-148 | 526.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene017699.t1 | G7L5V8 | 96.5 | 454 | 14 | 1 | 1 | 454 | 1 | 452 | 1.1e-249 | 871.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene017699.t1 | TR | SNF2 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene017699.t1 | MTR_7g089190 | 96.476 | 454 | 14 | 1 | 1 | 454 | 1 | 452 | 0.0 | 916 |
MS.gene017699.t1 | MTR_1g044120 | 34.629 | 283 | 156 | 6 | 195 | 449 | 463 | 744 | 3.91e-45 | 169 |
MS.gene017699.t1 | MTR_2g084630 | 27.198 | 489 | 265 | 12 | 53 | 453 | 158 | 643 | 1.10e-44 | 168 |
MS.gene017699.t1 | MTR_2g084630 | 27.443 | 481 | 268 | 11 | 53 | 453 | 158 | 637 | 1.11e-44 | 168 |
MS.gene017699.t1 | MTR_2g012830 | 27.374 | 358 | 143 | 8 | 188 | 454 | 536 | 867 | 3.60e-35 | 140 |
MS.gene017699.t1 | MTR_5g067980 | 32.768 | 177 | 91 | 4 | 296 | 444 | 487 | 663 | 2.16e-20 | 95.5 |
MS.gene017699.t1 | MTR_4g118845 | 31.868 | 182 | 96 | 6 | 253 | 428 | 209 | 368 | 1.44e-18 | 89.4 |
MS.gene017699.t1 | MTR_4g118845 | 31.868 | 182 | 96 | 6 | 253 | 428 | 22 | 181 | 1.47e-18 | 89.4 |
MS.gene017699.t1 | MTR_2g020000 | 30.939 | 181 | 99 | 5 | 253 | 428 | 212 | 371 | 2.58e-17 | 85.5 |
MS.gene017699.t1 | MTR_4g035100 | 29.534 | 193 | 117 | 5 | 253 | 441 | 1471 | 1648 | 3.33e-17 | 85.5 |
MS.gene017699.t1 | MTR_4g035100 | 29.534 | 193 | 117 | 5 | 253 | 441 | 1471 | 1648 | 3.48e-17 | 85.5 |
MS.gene017699.t1 | MTR_4g078460 | 24.074 | 270 | 163 | 7 | 191 | 458 | 405 | 634 | 4.09e-17 | 84.7 |
MS.gene017699.t1 | MTR_4g078495 | 25.185 | 270 | 160 | 9 | 191 | 458 | 119 | 348 | 4.42e-17 | 84.7 |
MS.gene017699.t1 | MTR_4g078460 | 24.074 | 270 | 163 | 7 | 191 | 458 | 405 | 634 | 4.70e-17 | 84.7 |
MS.gene017699.t1 | MTR_1g115215 | 38.889 | 90 | 55 | 0 | 365 | 454 | 522 | 611 | 2.76e-16 | 82.4 |
MS.gene017699.t1 | MTR_1g053955 | 32.955 | 176 | 90 | 7 | 253 | 422 | 542 | 695 | 6.86e-16 | 81.3 |
MS.gene017699.t1 | MTR_1g035330 | 27.041 | 196 | 106 | 6 | 250 | 428 | 214 | 389 | 3.22e-15 | 78.6 |
MS.gene017699.t1 | MTR_4g049500 | 31.667 | 120 | 78 | 1 | 252 | 367 | 260 | 379 | 6.96e-15 | 77.8 |
MS.gene017699.t1 | MTR_4g049500 | 47.458 | 59 | 31 | 0 | 370 | 428 | 455 | 513 | 2.75e-11 | 66.6 |
MS.gene017699.t1 | MTR_7g090960 | 28.804 | 184 | 93 | 6 | 253 | 422 | 599 | 758 | 1.21e-14 | 77.4 |
MS.gene017699.t1 | MTR_7g090960 | 28.804 | 184 | 93 | 6 | 253 | 422 | 518 | 677 | 1.29e-14 | 77.0 |
MS.gene017699.t1 | MTR_4g118720 | 28.111 | 217 | 130 | 7 | 253 | 463 | 1026 | 1222 | 6.42e-14 | 75.1 |
MS.gene017699.t1 | MTR_5g005840 | 30.857 | 175 | 96 | 5 | 253 | 422 | 384 | 538 | 6.81e-14 | 74.7 |
MS.gene017699.t1 | MTR_5g020000 | 26.738 | 187 | 102 | 6 | 253 | 428 | 205 | 367 | 8.06e-14 | 74.3 |
MS.gene017699.t1 | MTR_3g053910 | 28.421 | 190 | 101 | 5 | 254 | 430 | 622 | 789 | 1.49e-13 | 73.9 |
MS.gene017699.t1 | MTR_3g053910 | 28.421 | 190 | 101 | 5 | 254 | 430 | 593 | 760 | 1.55e-13 | 73.9 |
MS.gene017699.t1 | MTR_5g090090 | 27.083 | 192 | 101 | 6 | 254 | 431 | 639 | 805 | 5.60e-13 | 72.0 |
MS.gene017699.t1 | MTR_5g090090 | 27.083 | 192 | 101 | 6 | 254 | 431 | 639 | 805 | 5.90e-13 | 72.0 |
MS.gene017699.t1 | MTR_7g039320 | 26.939 | 245 | 101 | 11 | 199 | 421 | 35 | 223 | 1.85e-12 | 70.1 |
MS.gene017699.t1 | MTR_7g039320 | 26.939 | 245 | 101 | 11 | 199 | 421 | 35 | 223 | 1.94e-12 | 70.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene017699.t1 | AT5G05130 | 56.646 | 489 | 162 | 7 | 1 | 454 | 42 | 515 | 0.0 | 535 |
MS.gene017699.t1 | AT5G22750 | 35.738 | 305 | 144 | 6 | 201 | 453 | 346 | 650 | 7.90e-45 | 168 |
MS.gene017699.t1 | AT5G43530 | 33.670 | 297 | 163 | 9 | 190 | 453 | 604 | 899 | 9.61e-44 | 165 |
MS.gene017699.t1 | AT3G16600 | 31.338 | 284 | 138 | 5 | 195 | 453 | 45 | 296 | 3.94e-40 | 153 |
MS.gene017699.t1 | AT1G11100 | 31.633 | 294 | 142 | 8 | 193 | 454 | 389 | 655 | 4.24e-37 | 145 |
MS.gene017699.t1 | AT1G11100 | 31.633 | 294 | 142 | 8 | 193 | 454 | 532 | 798 | 5.32e-37 | 145 |
MS.gene017699.t1 | AT1G61140 | 27.143 | 350 | 139 | 7 | 195 | 454 | 390 | 713 | 4.34e-34 | 136 |
MS.gene017699.t1 | AT1G61140 | 27.143 | 350 | 139 | 7 | 195 | 454 | 555 | 878 | 5.31e-34 | 136 |
MS.gene017699.t1 | AT1G61140 | 27.143 | 350 | 139 | 7 | 195 | 454 | 548 | 871 | 5.80e-34 | 136 |
MS.gene017699.t1 | AT1G02670 | 37.433 | 187 | 97 | 4 | 250 | 428 | 142 | 316 | 1.03e-32 | 130 |
MS.gene017699.t1 | AT1G02670 | 37.433 | 187 | 97 | 4 | 250 | 428 | 115 | 289 | 1.80e-32 | 130 |
MS.gene017699.t1 | AT1G02670 | 37.433 | 187 | 97 | 4 | 250 | 428 | 115 | 289 | 1.94e-32 | 131 |
MS.gene017699.t1 | AT1G02670 | 37.838 | 185 | 95 | 4 | 252 | 428 | 144 | 316 | 2.72e-32 | 130 |
MS.gene017699.t1 | AT1G02670 | 37.838 | 185 | 95 | 4 | 252 | 428 | 144 | 316 | 3.03e-32 | 130 |
MS.gene017699.t1 | AT1G11100 | 27.811 | 338 | 141 | 8 | 193 | 454 | 532 | 842 | 5.49e-32 | 130 |
MS.gene017699.t1 | AT1G02670 | 37.705 | 183 | 92 | 5 | 252 | 424 | 144 | 314 | 3.77e-30 | 124 |
MS.gene017699.t1 | AT1G02670 | 37.705 | 183 | 92 | 5 | 252 | 424 | 155 | 325 | 4.12e-30 | 124 |
MS.gene017699.t1 | AT2G40770 | 32.597 | 181 | 95 | 3 | 296 | 449 | 499 | 679 | 2.87e-23 | 104 |
MS.gene017699.t1 | AT2G40770 | 32.597 | 181 | 95 | 3 | 296 | 449 | 499 | 679 | 2.87e-23 | 104 |
MS.gene017699.t1 | AT2G40770 | 32.597 | 181 | 95 | 3 | 296 | 449 | 499 | 679 | 2.87e-23 | 104 |
MS.gene017699.t1 | AT3G54280 | 29.319 | 191 | 120 | 4 | 253 | 441 | 1503 | 1680 | 3.11e-19 | 92.0 |
MS.gene017699.t1 | AT3G54280 | 29.319 | 191 | 120 | 4 | 253 | 441 | 1472 | 1649 | 3.40e-19 | 91.7 |
MS.gene017699.t1 | AT1G03750 | 25.490 | 255 | 147 | 7 | 195 | 447 | 132 | 345 | 5.39e-19 | 90.9 |
MS.gene017699.t1 | AT3G20010 | 41.758 | 91 | 53 | 0 | 364 | 454 | 245 | 335 | 1.82e-18 | 89.0 |
MS.gene017699.t1 | AT3G20010 | 41.758 | 91 | 53 | 0 | 364 | 454 | 270 | 360 | 2.19e-18 | 88.6 |
MS.gene017699.t1 | AT1G05120 | 30.769 | 182 | 82 | 5 | 187 | 366 | 124 | 263 | 2.58e-18 | 88.6 |
MS.gene017699.t1 | AT1G05120 | 50.847 | 59 | 29 | 0 | 370 | 428 | 354 | 412 | 3.80e-12 | 69.3 |
MS.gene017699.t1 | AT1G05120 | 30.769 | 182 | 82 | 5 | 187 | 366 | 167 | 306 | 2.70e-18 | 88.6 |
MS.gene017699.t1 | AT1G05120 | 49.180 | 61 | 31 | 0 | 368 | 428 | 395 | 455 | 4.13e-12 | 68.9 |
MS.gene017699.t1 | AT3G20010 | 41.758 | 91 | 53 | 0 | 364 | 454 | 536 | 626 | 3.83e-18 | 88.2 |
MS.gene017699.t1 | AT3G20010 | 41.758 | 91 | 53 | 0 | 364 | 454 | 536 | 626 | 3.83e-18 | 88.2 |
MS.gene017699.t1 | AT3G20010 | 41.758 | 91 | 53 | 0 | 364 | 454 | 536 | 626 | 3.83e-18 | 88.2 |
MS.gene017699.t1 | AT3G20010 | 41.758 | 91 | 53 | 0 | 364 | 454 | 536 | 626 | 4.76e-18 | 87.8 |
MS.gene017699.t1 | AT3G20010 | 41.758 | 91 | 53 | 0 | 364 | 454 | 536 | 626 | 4.76e-18 | 87.8 |
MS.gene017699.t1 | AT3G20010 | 41.758 | 91 | 53 | 0 | 364 | 454 | 536 | 626 | 4.76e-18 | 87.8 |
MS.gene017699.t1 | AT5G18620 | 32.967 | 182 | 94 | 7 | 253 | 428 | 215 | 374 | 3.63e-17 | 85.1 |
MS.gene017699.t1 | AT5G18620 | 32.967 | 182 | 94 | 7 | 253 | 428 | 215 | 374 | 3.63e-17 | 85.1 |
MS.gene017699.t1 | AT3G06400 | 32.418 | 182 | 95 | 7 | 253 | 428 | 210 | 369 | 8.22e-17 | 84.0 |
MS.gene017699.t1 | AT3G06400 | 32.418 | 182 | 95 | 7 | 253 | 428 | 210 | 369 | 8.44e-17 | 84.0 |
MS.gene017699.t1 | AT3G06400 | 32.418 | 182 | 95 | 7 | 253 | 428 | 210 | 369 | 8.75e-17 | 84.0 |
MS.gene017699.t1 | AT1G50410 | 27.652 | 264 | 101 | 9 | 195 | 406 | 218 | 443 | 2.64e-16 | 82.4 |
MS.gene017699.t1 | AT1G50410 | 40.000 | 90 | 54 | 0 | 365 | 454 | 466 | 555 | 2.81e-16 | 82.4 |
MS.gene017699.t1 | AT1G50410 | 40.000 | 90 | 54 | 0 | 365 | 454 | 466 | 555 | 3.25e-16 | 82.0 |
MS.gene017699.t1 | AT1G50410 | 27.652 | 264 | 101 | 9 | 195 | 406 | 218 | 443 | 3.46e-16 | 82.0 |
MS.gene017699.t1 | AT1G50410 | 40.000 | 90 | 54 | 0 | 365 | 454 | 466 | 555 | 3.25e-16 | 82.0 |
MS.gene017699.t1 | AT1G50410 | 27.652 | 264 | 101 | 9 | 195 | 406 | 218 | 443 | 3.46e-16 | 82.0 |
MS.gene017699.t1 | AT1G50410 | 40.000 | 90 | 54 | 0 | 365 | 454 | 466 | 555 | 3.25e-16 | 82.0 |
MS.gene017699.t1 | AT1G50410 | 27.652 | 264 | 101 | 9 | 195 | 406 | 218 | 443 | 3.46e-16 | 82.0 |
MS.gene017699.t1 | AT3G12810 | 31.818 | 176 | 92 | 6 | 253 | 422 | 553 | 706 | 4.63e-16 | 82.0 |
MS.gene017699.t1 | AT3G12810 | 31.818 | 176 | 92 | 6 | 253 | 422 | 557 | 710 | 4.67e-16 | 82.0 |
MS.gene017699.t1 | AT1G11100 | 39.560 | 91 | 55 | 0 | 364 | 454 | 751 | 841 | 2.66e-15 | 79.3 |
MS.gene017699.t1 | AT1G11100 | 39.560 | 91 | 55 | 0 | 364 | 454 | 609 | 699 | 2.82e-15 | 79.3 |
MS.gene017699.t1 | AT3G54460 | 28.571 | 161 | 107 | 4 | 296 | 448 | 456 | 616 | 3.04e-15 | 79.0 |
MS.gene017699.t1 | AT3G54460 | 28.571 | 161 | 107 | 4 | 296 | 448 | 753 | 913 | 3.74e-15 | 79.0 |
MS.gene017699.t1 | AT2G02090 | 27.461 | 193 | 109 | 6 | 250 | 428 | 232 | 407 | 1.32e-14 | 77.0 |
MS.gene017699.t1 | AT2G28290 | 29.487 | 234 | 110 | 9 | 195 | 422 | 746 | 930 | 3.91e-14 | 75.9 |
MS.gene017699.t1 | AT2G28290 | 29.487 | 234 | 110 | 9 | 195 | 422 | 747 | 931 | 3.98e-14 | 75.9 |
MS.gene017699.t1 | AT2G28290 | 29.487 | 234 | 110 | 9 | 195 | 422 | 746 | 930 | 4.01e-14 | 75.9 |
MS.gene017699.t1 | AT2G28290 | 29.487 | 234 | 110 | 9 | 195 | 422 | 746 | 930 | 4.01e-14 | 75.9 |
MS.gene017699.t1 | AT2G28290 | 29.487 | 234 | 110 | 9 | 195 | 422 | 747 | 931 | 4.15e-14 | 75.9 |
MS.gene017699.t1 | AT2G28290 | 29.060 | 234 | 111 | 9 | 195 | 422 | 746 | 930 | 4.26e-14 | 75.9 |
MS.gene017699.t1 | AT3G06010 | 27.074 | 229 | 120 | 9 | 253 | 468 | 424 | 618 | 4.96e-13 | 72.0 |
MS.gene017699.t1 | AT5G66750 | 26.667 | 195 | 106 | 6 | 253 | 435 | 223 | 392 | 2.83e-12 | 69.7 |
MS.gene017699.t1 | AT3G57300 | 26.882 | 186 | 94 | 6 | 253 | 422 | 607 | 766 | 4.21e-12 | 69.3 |
MS.gene017699.t1 | AT4G31900 | 28.095 | 210 | 111 | 7 | 254 | 453 | 206 | 385 | 4.35e-12 | 69.3 |
MS.gene017699.t1 | AT4G31900 | 28.095 | 210 | 111 | 7 | 254 | 453 | 247 | 426 | 4.59e-12 | 68.9 |
MS.gene017699.t1 | AT4G31900 | 28.095 | 210 | 111 | 7 | 254 | 453 | 247 | 426 | 5.04e-12 | 68.9 |
MS.gene017699.t1 | AT3G57300 | 26.882 | 186 | 94 | 6 | 253 | 422 | 607 | 766 | 5.56e-12 | 68.9 |
MS.gene017699.t1 | AT3G57300 | 26.882 | 186 | 94 | 6 | 253 | 422 | 607 | 766 | 5.56e-12 | 68.9 |
MS.gene017699.t1 | AT2G13370 | 26.178 | 191 | 104 | 5 | 254 | 430 | 647 | 814 | 8.89e-12 | 68.2 |
MS.gene017699.t1 | AT2G13370 | 26.178 | 191 | 104 | 5 | 254 | 430 | 647 | 814 | 8.89e-12 | 68.2 |
MS.gene017699.t1 | AT2G13370 | 26.178 | 191 | 104 | 5 | 254 | 430 | 647 | 814 | 8.89e-12 | 68.2 |
MS.gene017699.t1 | AT5G19310 | 26.126 | 222 | 130 | 8 | 253 | 468 | 143 | 336 | 1.17e-11 | 67.8 |
MS.gene017699.t1 | AT5G19310 | 28.977 | 176 | 97 | 7 | 253 | 422 | 407 | 560 | 1.46e-11 | 67.4 |
MS.gene017699.t1 | AT2G44980 | 28.729 | 181 | 91 | 8 | 257 | 421 | 77 | 235 | 2.37e-11 | 66.6 |
Find 129 sgRNAs with CRISPR-Local
Find 143 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGAAGGTTTATATGTATTA+TGG | 0.243058 | 7.2:+19124944 | MS.gene017699:CDS |
TTTGCGGACGGGATGGGATT+AGG | 0.262324 | 7.2:+19124737 | MS.gene017699:CDS |
CTGATGATTTACCGCCGTTT+TGG | 0.262594 | 7.2:+19124633 | MS.gene017699:CDS |
GGATACTCCTGTGAAGAAAT+TGG | 0.280994 | 7.2:+19125057 | MS.gene017699:CDS |
TTGGAGTCGTATGGGTTTAA+AGG | 0.302377 | 7.2:-19124113 | None:intergenic |
GAAACCGGCGAGGTAGGTTT+CGG | 0.351950 | 7.2:-19124012 | None:intergenic |
TTGCGGACGGGATGGGATTA+GGG | 0.354547 | 7.2:+19124738 | MS.gene017699:CDS |
GATACTCCTGTGAAGAAATT+GGG | 0.364943 | 7.2:+19125058 | MS.gene017699:CDS |
GGTAGGTTTCGGATTGGGAT+TGG | 0.365722 | 7.2:-19124001 | None:intergenic |
CGAGTTTGAAAATTTGATCT+AGG | 0.366948 | 7.2:-19124484 | None:intergenic |
CGGTTCAGAAACTAGGGTTT+TGG | 0.367071 | 7.2:-19124525 | None:intergenic |
TTTATATGTATTATGGTGAT+AGG | 0.371908 | 7.2:+19124951 | MS.gene017699:CDS |
GATAAAATGAAAATGAAAAG+TGG | 0.372811 | 7.2:+19124794 | MS.gene017699:CDS |
TGCGCGGCCGGAGCCTCTCT+CGG | 0.374792 | 7.2:+19124706 | MS.gene017699:CDS |
GGGGTGGAGGAGGATTGTTT+TGG | 0.395962 | 7.2:+19125078 | MS.gene017699:CDS |
GTAGGTTTCGGATTGGGATT+GGG | 0.396664 | 7.2:-19124000 | None:intergenic |
TGTTAATGCGGGACAGAGTC+AGG | 0.398787 | 7.2:+19125123 | MS.gene017699:CDS |
GGCGAGGTAGGTTTCGGATT+GGG | 0.403200 | 7.2:-19124006 | None:intergenic |
AAGAGGAGATGGGCTGTTAC+GGG | 0.409943 | 7.2:+19125166 | MS.gene017699:CDS |
TTCGACATGGATAACTCAAT+TGG | 0.410437 | 7.2:+19124898 | MS.gene017699:CDS |
GGTTTAACGGTTCAGAAACT+AGG | 0.413284 | 7.2:-19124532 | None:intergenic |
GTCAGCGCGTGTTTCTTTAA+CGG | 0.413934 | 7.2:-19124414 | None:intergenic |
GGGAGCTGAGTTGCGGTGTT+CGG | 0.416851 | 7.2:+19125036 | MS.gene017699:CDS |
TTCGGATTGGGATTGGGAGA+AGG | 0.428738 | 7.2:-19123994 | None:intergenic |
TCATAAGAACCATTCTGAAT+AGG | 0.433793 | 7.2:-19125193 | None:intergenic |
GACCGGGATGAGTCGATTGC+AGG | 0.436131 | 7.2:+19125312 | MS.gene017699:CDS |
ATGCTAGAAGGAGGGTTTAA+CGG | 0.438865 | 7.2:-19124545 | None:intergenic |
TTAACGTTGCTATCGTTGAT+TGG | 0.448424 | 7.2:+19124767 | MS.gene017699:CDS |
GAAGAGGAGATGGGCTGTTA+CGG | 0.450082 | 7.2:+19125165 | MS.gene017699:CDS |
TTGATGGCGTTGGAGTCGTA+TGG | 0.450151 | 7.2:-19124122 | None:intergenic |
CTTTGAATGCGAAGAGGAGA+TGG | 0.451636 | 7.2:+19125155 | MS.gene017699:CDS |
TCTGATTTAATAATGCTAGA+AGG | 0.452942 | 7.2:-19124557 | None:intergenic |
ATCCCTCCCGAGAGAGGCTC+CGG | 0.453624 | 7.2:-19124713 | None:intergenic |
CAATAACTCTTAATAGAAAA+CGG | 0.456175 | 7.2:-19125250 | None:intergenic |
GATGTTGGCCATTACGAAAC+CGG | 0.457398 | 7.2:-19124027 | None:intergenic |
GCGCGGCCGGAGCCTCTCTC+GGG | 0.458130 | 7.2:+19124707 | MS.gene017699:CDS |
GGGATATTTGCGGACGGGAT+GGG | 0.460336 | 7.2:+19124731 | MS.gene017699:CDS |
TTGAGTGTTGAGGACTTTGA+TGG | 0.469309 | 7.2:-19124138 | None:intergenic |
CTCCACCCCAATTTCTTCAC+AGG | 0.470263 | 7.2:-19125064 | None:intergenic |
CACTACTCCGGCACCATCAC+CGG | 0.474897 | 7.2:+19124062 | MS.gene017699:CDS |
TAGGGGTAGTGTAGAGAGGG+TGG | 0.476445 | 7.2:+19124829 | MS.gene017699:CDS |
GAGGATTTCGCGGCCGGTGA+TGG | 0.480465 | 7.2:-19124075 | None:intergenic |
TCGGATTGGGATTGGGAGAA+GGG | 0.481945 | 7.2:-19123993 | None:intergenic |
TAAGCCGAGGATTTCGCGGC+CGG | 0.485440 | 7.2:-19124081 | None:intergenic |
CCCTCTTTCTCCTCCCAAAA+CGG | 0.487569 | 7.2:-19124647 | None:intergenic |
GTTCAGCGACCTCTTAATCA+AGG | 0.488325 | 7.2:+19125283 | MS.gene017699:CDS |
TTCGCGGCCGGTGATGGTGC+CGG | 0.488545 | 7.2:-19124069 | None:intergenic |
TACTAACCGTGGCACGTTGA+AGG | 0.489496 | 7.2:+19124928 | MS.gene017699:CDS |
CTCAAGATGCTGAGGAGTTG+AGG | 0.490043 | 7.2:+19124978 | MS.gene017699:CDS |
TAAGAGTTATTGGCAAAGCT+TGG | 0.490157 | 7.2:+19125261 | MS.gene017699:CDS |
TTGACTACTTATGCTACATT+GGG | 0.494687 | 7.2:+19125016 | MS.gene017699:CDS |
GTTGAGGACTTTGATGGCGT+TGG | 0.504215 | 7.2:-19124132 | None:intergenic |
CGGCGAGGTAGGTTTCGGAT+TGG | 0.508795 | 7.2:-19124007 | None:intergenic |
GTTGACTACTTATGCTACAT+TGG | 0.511870 | 7.2:+19125015 | MS.gene017699:CDS |
AGCGCTGATTCTGTAACAAC+CGG | 0.513980 | 7.2:+19124443 | MS.gene017699:CDS |
GGATTAAGCCGAGGATTTCG+CGG | 0.515048 | 7.2:-19124085 | None:intergenic |
CTACCTCGCCGGTTTCGTAA+TGG | 0.515519 | 7.2:+19124019 | MS.gene017699:CDS |
AGTGGGAAGAAAAGAGGTAG+GGG | 0.516027 | 7.2:+19124812 | MS.gene017699:CDS |
CGCGTTCGATGTAACCGACT+TGG | 0.516483 | 7.2:-19124166 | None:intergenic |
AAGTGGGAAGAAAAGAGGTA+GGG | 0.519183 | 7.2:+19124811 | MS.gene017699:CDS |
AGGGATATTTGCGGACGGGA+TGG | 0.519906 | 7.2:+19124730 | MS.gene017699:CDS |
TGATGGCGTTGGAGTCGTAT+GGG | 0.521093 | 7.2:-19124121 | None:intergenic |
TGAAGAAATTGGGGTGGAGG+AGG | 0.522236 | 7.2:+19125068 | MS.gene017699:CDS |
CGGCCGGAGCCTCTCTCGGG+AGG | 0.523817 | 7.2:+19124710 | MS.gene017699:CDS |
ATAAAATGAAAATGAAAAGT+GGG | 0.525475 | 7.2:+19124795 | MS.gene017699:CDS |
ATGAAAAGTGGGAAGAAAAG+AGG | 0.526742 | 7.2:+19124806 | MS.gene017699:CDS |
TATGAATCTGACAAGGGATA+CGG | 0.528146 | 7.2:-19124283 | None:intergenic |
ATCACCGGCCGCGAAATCCT+CGG | 0.528188 | 7.2:+19124077 | MS.gene017699:CDS |
CTGTGAAGAAATTGGGGTGG+AGG | 0.528357 | 7.2:+19125065 | MS.gene017699:CDS |
GTCGAGGAGAGGAGCGAGAG+CGG | 0.529382 | 7.2:-19124198 | None:intergenic |
TTCGTAATGGCCAACATCGT+CGG | 0.530765 | 7.2:+19124032 | MS.gene017699:CDS |
CTCCTTCTGTGATTTCGACA+TGG | 0.531528 | 7.2:+19124885 | MS.gene017699:CDS |
GCGTGTTTCTTTAACGGCGG+CGG | 0.532351 | 7.2:-19124408 | None:intergenic |
CTTGGAGTGTTTGAGTGTTG+AGG | 0.532776 | 7.2:-19124148 | None:intergenic |
TTATCAAACTAATGCGCGGC+CGG | 0.540005 | 7.2:+19124694 | MS.gene017699:CDS |
AGGTAGGGGTAGTGTAGAGA+GGG | 0.545313 | 7.2:+19124826 | MS.gene017699:CDS |
ATACGAAATGAAATGAACAT+TGG | 0.545733 | 7.2:-19124357 | None:intergenic |
GTGTTTAATGCCGACGATGT+TGG | 0.546373 | 7.2:-19124042 | None:intergenic |
GAGGTAGGGGTAGTGTAGAG+AGG | 0.546579 | 7.2:+19124825 | MS.gene017699:CDS |
AAAGTGGGAAGAAAAGAGGT+AGG | 0.547195 | 7.2:+19124810 | MS.gene017699:CDS |
GTTTAACGGTTCAGAAACTA+GGG | 0.551674 | 7.2:-19124531 | None:intergenic |
GGCCGGAGCCTCTCTCGGGA+GGG | 0.552185 | 7.2:+19124711 | MS.gene017699:CDS |
CGTATGGGTTTAAAGGTTCG+CGG | 0.555958 | 7.2:-19124106 | None:intergenic |
CTTAATCAAGGAAAACAGAC+CGG | 0.556797 | 7.2:+19125295 | MS.gene017699:CDS |
TACCTGCAATCGACTCATCC+CGG | 0.558747 | 7.2:-19125314 | None:intergenic |
CATTACGAAACCGGCGAGGT+AGG | 0.559895 | 7.2:-19124018 | None:intergenic |
GCAAATATCCCTCCCGAGAG+AGG | 0.560537 | 7.2:-19124719 | None:intergenic |
GGGTTCTTGTGAGTCTTCCA+TGG | 0.560574 | 7.2:-19123973 | None:intergenic |
ACGGGGACGCCTATTCAGAA+TGG | 0.563434 | 7.2:+19125184 | MS.gene017699:CDS |
GACATGGATAACTCAATTGG+AGG | 0.564551 | 7.2:+19124901 | MS.gene017699:CDS |
AGCGCGTGTTTCTTTAACGG+CGG | 0.569465 | 7.2:-19124411 | None:intergenic |
GCGAGTGTTGGTTTGAACGA+TGG | 0.569836 | 7.2:-19124243 | None:intergenic |
ATTTAATAATGCTAGAAGGA+GGG | 0.574890 | 7.2:-19124553 | None:intergenic |
GATTTAATAATGCTAGAAGG+AGG | 0.575245 | 7.2:-19124554 | None:intergenic |
CGGGAGGGATATTTGCGGAC+GGG | 0.579950 | 7.2:+19124726 | MS.gene017699:CDS |
GAGGAGAGGAGCGAGAGCGG+CGG | 0.582518 | 7.2:-19124195 | None:intergenic |
GTTATTGTTAGAGCGAGTGT+TGG | 0.586502 | 7.2:-19124255 | None:intergenic |
ATATGTATTATGGTGATAGG+AGG | 0.588645 | 7.2:+19124954 | MS.gene017699:CDS |
ACGATCAAGAATGTTAATGC+GGG | 0.594066 | 7.2:+19125112 | MS.gene017699:CDS |
AGGGTGGAGAGTGAGACAAA+TGG | 0.602442 | 7.2:+19124845 | MS.gene017699:CDS |
TGTTACAGAATCAGCGCTGA+CGG | 0.605972 | 7.2:-19124438 | None:intergenic |
TATAAACCTTCAACGTGCCA+CGG | 0.606128 | 7.2:-19124934 | None:intergenic |
ATGATATGAGCGTCGAGGAG+AGG | 0.615397 | 7.2:-19124209 | None:intergenic |
ATCCATGTCGAAATCACAGA+AGG | 0.617581 | 7.2:-19124887 | None:intergenic |
TTTGAATGCGAAGAGGAGAT+GGG | 0.618382 | 7.2:+19125156 | MS.gene017699:CDS |
GCGAAGATATGAATCTGACA+AGG | 0.618949 | 7.2:-19124290 | None:intergenic |
TTAATCAAGGAAAACAGACC+GGG | 0.621325 | 7.2:+19125296 | MS.gene017699:CDS |
CAATCCGAAACCTACCTCGC+CGG | 0.623218 | 7.2:+19124008 | MS.gene017699:CDS |
ATACTCCTGTGAAGAAATTG+GGG | 0.629443 | 7.2:+19125059 | MS.gene017699:CDS |
CTCCTGTGAAGAAATTGGGG+TGG | 0.632108 | 7.2:+19125062 | MS.gene017699:CDS |
TCTCTCGGGAGGGATATTTG+CGG | 0.634363 | 7.2:+19124721 | MS.gene017699:CDS |
TCGGGAGGGATATTTGCGGA+CGG | 0.634657 | 7.2:+19124725 | MS.gene017699:CDS |
TACGATCAAGAATGTTAATG+CGG | 0.642076 | 7.2:+19125111 | MS.gene017699:CDS |
TAGGAGGACTCAAGATGCTG+AGG | 0.643252 | 7.2:+19124970 | MS.gene017699:CDS |
CTACATTGGGAGCTGAGTTG+CGG | 0.644145 | 7.2:+19125029 | MS.gene017699:CDS |
AGAGGAGATGGGCTGTTACG+GGG | 0.645108 | 7.2:+19125167 | MS.gene017699:CDS |
GTCGGCATTAAACACTACTC+CGG | 0.651569 | 7.2:+19124050 | MS.gene017699:CDS |
AAGGTTCGCGGATTAAGCCG+AGG | 0.655327 | 7.2:-19124094 | None:intergenic |
AACACTCAAACACTCCAAGT+CGG | 0.656074 | 7.2:+19124152 | MS.gene017699:CDS |
CATGTCGAAATCACAGAAGG+AGG | 0.664824 | 7.2:-19124884 | None:intergenic |
CGAAGATATGAATCTGACAA+GGG | 0.668320 | 7.2:-19124289 | None:intergenic |
TTTGAACGATGGCTTCGACG+TGG | 0.670822 | 7.2:-19124232 | None:intergenic |
TGATTGCTTTGAATGCGAAG+AGG | 0.688442 | 7.2:+19125149 | MS.gene017699:CDS |
TTGGAGGAACATACTAACCG+TGG | 0.701328 | 7.2:+19124917 | MS.gene017699:CDS |
TGGCCATTACGAAACCGGCG+AGG | 0.702379 | 7.2:-19124022 | None:intergenic |
CGAATTATCAAACTAATGCG+CGG | 0.709330 | 7.2:+19124690 | MS.gene017699:CDS |
TCTTTCTCCTCCCAAAACGG+CGG | 0.713897 | 7.2:-19124644 | None:intergenic |
GAATGAGAAAGAGTAAACGA+AGG | 0.718846 | 7.2:-19124386 | None:intergenic |
CGTGGATGATATGAGCGTCG+AGG | 0.719430 | 7.2:-19124214 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAAAATGAAAATGAAAAGT+GGG | + | chr7.2:19124795-19124814 | MS.gene017699:CDS | 15.0% |
!!! | GTTTTTACTATTATTATTAC+CGG | - | chr7.2:19124465-19124484 | None:intergenic | 15.0% |
!! | CAATAACTCTTAATAGAAAA+CGG | - | chr7.2:19125253-19125272 | None:intergenic | 20.0% |
!! | GATAAAATGAAAATGAAAAG+TGG | + | chr7.2:19124794-19124813 | MS.gene017699:CDS | 20.0% |
!! | TTGAAGGTTTATATGTATTA+TGG | + | chr7.2:19124944-19124963 | MS.gene017699:CDS | 20.0% |
!! | TTTATATGTATTATGGTGAT+AGG | + | chr7.2:19124951-19124970 | MS.gene017699:CDS | 20.0% |
! | ATACGAAATGAAATGAACAT+TGG | - | chr7.2:19124360-19124379 | None:intergenic | 25.0% |
! | ATTTAATAATGCTAGAAGGA+GGG | - | chr7.2:19124556-19124575 | None:intergenic | 25.0% |
! | TCTGATTTAATAATGCTAGA+AGG | - | chr7.2:19124560-19124579 | None:intergenic | 25.0% |
!! | CGTTTTCTATTAAGAGTTAT+TGG | + | chr7.2:19125251-19125270 | MS.gene017699:CDS | 25.0% |
!!! | TTATGACTTGTTTTCTCTTA+TGG | + | chr7.2:19125210-19125229 | MS.gene017699:CDS | 25.0% |
ATATGTATTATGGTGATAGG+AGG | + | chr7.2:19124954-19124973 | MS.gene017699:CDS | 30.0% | |
CGAGTTTGAAAATTTGATCT+AGG | - | chr7.2:19124487-19124506 | None:intergenic | 30.0% | |
GATTTAATAATGCTAGAAGG+AGG | - | chr7.2:19124557-19124576 | None:intergenic | 30.0% | |
TACGATCAAGAATGTTAATG+CGG | + | chr7.2:19125111-19125130 | MS.gene017699:CDS | 30.0% | |
TCATAAGAACCATTCTGAAT+AGG | - | chr7.2:19125196-19125215 | None:intergenic | 30.0% | |
TTGACTACTTATGCTACATT+GGG | + | chr7.2:19125016-19125035 | MS.gene017699:CDS | 30.0% | |
ACGATCAAGAATGTTAATGC+GGG | + | chr7.2:19125112-19125131 | MS.gene017699:CDS | 35.0% | |
ATACTCCTGTGAAGAAATTG+GGG | + | chr7.2:19125059-19125078 | MS.gene017699:CDS | 35.0% | |
ATGAAAAGTGGGAAGAAAAG+AGG | + | chr7.2:19124806-19124825 | MS.gene017699:CDS | 35.0% | |
CGAAGATATGAATCTGACAA+GGG | - | chr7.2:19124292-19124311 | None:intergenic | 35.0% | |
CGAATTATCAAACTAATGCG+CGG | + | chr7.2:19124690-19124709 | MS.gene017699:CDS | 35.0% | |
CTTAATCAAGGAAAACAGAC+CGG | + | chr7.2:19125295-19125314 | MS.gene017699:CDS | 35.0% | |
GAATGAGAAAGAGTAAACGA+AGG | - | chr7.2:19124389-19124408 | None:intergenic | 35.0% | |
GATACTCCTGTGAAGAAATT+GGG | + | chr7.2:19125058-19125077 | MS.gene017699:CDS | 35.0% | |
GTTGACTACTTATGCTACAT+TGG | + | chr7.2:19125015-19125034 | MS.gene017699:CDS | 35.0% | |
GTTTAACGGTTCAGAAACTA+GGG | - | chr7.2:19124534-19124553 | None:intergenic | 35.0% | |
TAAGAGTTATTGGCAAAGCT+TGG | + | chr7.2:19125261-19125280 | MS.gene017699:CDS | 35.0% | |
TATGAATCTGACAAGGGATA+CGG | - | chr7.2:19124286-19124305 | None:intergenic | 35.0% | |
TTAACGTTGCTATCGTTGAT+TGG | + | chr7.2:19124767-19124786 | MS.gene017699:CDS | 35.0% | |
TTAATCAAGGAAAACAGACC+GGG | + | chr7.2:19125296-19125315 | MS.gene017699:CDS | 35.0% | |
TTCGACATGGATAACTCAAT+TGG | + | chr7.2:19124898-19124917 | MS.gene017699:CDS | 35.0% | |
! | GTCTGTTTTCCTTGATTAAG+AGG | - | chr7.2:19125295-19125314 | None:intergenic | 35.0% |
AAAGTGGGAAGAAAAGAGGT+AGG | + | chr7.2:19124810-19124829 | MS.gene017699:CDS | 40.0% | |
AACACTCAAACACTCCAAGT+CGG | + | chr7.2:19124152-19124171 | MS.gene017699:CDS | 40.0% | |
AAGTGGGAAGAAAAGAGGTA+GGG | + | chr7.2:19124811-19124830 | MS.gene017699:CDS | 40.0% | |
ATCCATGTCGAAATCACAGA+AGG | - | chr7.2:19124890-19124909 | None:intergenic | 40.0% | |
ATGCTAGAAGGAGGGTTTAA+CGG | - | chr7.2:19124548-19124567 | None:intergenic | 40.0% | |
GACATGGATAACTCAATTGG+AGG | + | chr7.2:19124901-19124920 | MS.gene017699:CDS | 40.0% | |
GCGAAGATATGAATCTGACA+AGG | - | chr7.2:19124293-19124312 | None:intergenic | 40.0% | |
GGATACTCCTGTGAAGAAAT+TGG | + | chr7.2:19125057-19125076 | MS.gene017699:CDS | 40.0% | |
GGTTTAACGGTTCAGAAACT+AGG | - | chr7.2:19124535-19124554 | None:intergenic | 40.0% | |
GTTATTGTTAGAGCGAGTGT+TGG | - | chr7.2:19124258-19124277 | None:intergenic | 40.0% | |
TATAAACCTTCAACGTGCCA+CGG | - | chr7.2:19124937-19124956 | None:intergenic | 40.0% | |
TTGGAGTCGTATGGGTTTAA+AGG | - | chr7.2:19124116-19124135 | None:intergenic | 40.0% | |
TTTGAATGCGAAGAGGAGAT+GGG | + | chr7.2:19125156-19125175 | MS.gene017699:CDS | 40.0% | |
! | GCTGTTCATGACGCTTTTAA+CGG | + | chr7.2:19124332-19124351 | MS.gene017699:CDS | 40.0% |
! | TGATTGCTTTGAATGCGAAG+AGG | + | chr7.2:19125149-19125168 | MS.gene017699:CDS | 40.0% |
!! | ACCAAAAAGAAGCACTAGGA+TGG | + | chr7.2:19124591-19124610 | MS.gene017699:CDS | 40.0% |
!! | TGATGATTTACCGCCGTTTT+GGG | + | chr7.2:19124634-19124653 | MS.gene017699:CDS | 40.0% |
!! | TTGAGTGTTGAGGACTTTGA+TGG | - | chr7.2:19124141-19124160 | None:intergenic | 40.0% |
!!! | AAACTAGGGTTTTGGAAGCT+AGG | - | chr7.2:19124520-19124539 | None:intergenic | 40.0% |
AGTGGGAAGAAAAGAGGTAG+GGG | + | chr7.2:19124812-19124831 | MS.gene017699:CDS | 45.0% | |
CATGTCGAAATCACAGAAGG+AGG | - | chr7.2:19124887-19124906 | None:intergenic | 45.0% | |
CGTATGGGTTTAAAGGTTCG+CGG | - | chr7.2:19124109-19124128 | None:intergenic | 45.0% | |
CTCCTTCTGTGATTTCGACA+TGG | + | chr7.2:19124885-19124904 | MS.gene017699:CDS | 45.0% | |
CTTTGAATGCGAAGAGGAGA+TGG | + | chr7.2:19125155-19125174 | MS.gene017699:CDS | 45.0% | |
GATGTTGGCCATTACGAAAC+CGG | - | chr7.2:19124030-19124049 | None:intergenic | 45.0% | |
GTCAGCGCGTGTTTCTTTAA+CGG | - | chr7.2:19124417-19124436 | None:intergenic | 45.0% | |
GTCGGCATTAAACACTACTC+CGG | + | chr7.2:19124050-19124069 | MS.gene017699:CDS | 45.0% | |
GTGTTTAATGCCGACGATGT+TGG | - | chr7.2:19124045-19124064 | None:intergenic | 45.0% | |
GTTCAGCGACCTCTTAATCA+AGG | + | chr7.2:19125283-19125302 | MS.gene017699:CDS | 45.0% | |
TTATCAAACTAATGCGCGGC+CGG | + | chr7.2:19124694-19124713 | MS.gene017699:CDS | 45.0% | |
TTCGTAATGGCCAACATCGT+CGG | + | chr7.2:19124032-19124051 | MS.gene017699:CDS | 45.0% | |
TTGGAGGAACATACTAACCG+TGG | + | chr7.2:19124917-19124936 | MS.gene017699:CDS | 45.0% | |
! | CGGTTCAGAAACTAGGGTTT+TGG | - | chr7.2:19124528-19124547 | None:intergenic | 45.0% |
! | CTGATGATTTACCGCCGTTT+TGG | + | chr7.2:19124633-19124652 | MS.gene017699:CDS | 45.0% |
! | CTTGGAGTGTTTGAGTGTTG+AGG | - | chr7.2:19124151-19124170 | None:intergenic | 45.0% |
! | GCCATCCTAGTGCTTCTTTT+TGG | - | chr7.2:19124595-19124614 | None:intergenic | 45.0% |
! | GTAGGTTTCGGATTGGGATT+GGG | - | chr7.2:19124003-19124022 | None:intergenic | 45.0% |
! | TGTTACAGAATCAGCGCTGA+CGG | - | chr7.2:19124441-19124460 | None:intergenic | 45.0% |
!! | AGCGCTGATTCTGTAACAAC+CGG | + | chr7.2:19124443-19124462 | MS.gene017699:CDS | 45.0% |
!! | CAGCACCAAAAAGAAGCACT+AGG | + | chr7.2:19124587-19124606 | MS.gene017699:CDS | 45.0% |
!!! | GAGGAGGATTGTTTTGGATG+AGG | + | chr7.2:19125084-19125103 | MS.gene017699:CDS | 45.0% |
AGCGCGTGTTTCTTTAACGG+CGG | - | chr7.2:19124414-19124433 | None:intergenic | 50.0% | |
AGGGTGGAGAGTGAGACAAA+TGG | + | chr7.2:19124845-19124864 | MS.gene017699:CDS | 50.0% | |
AGGTAGGGGTAGTGTAGAGA+GGG | + | chr7.2:19124826-19124845 | MS.gene017699:CDS | 50.0% | |
CCCTCTTTCTCCTCCCAAAA+CGG | - | chr7.2:19124650-19124669 | None:intergenic | 50.0% | |
CTACATTGGGAGCTGAGTTG+CGG | + | chr7.2:19125029-19125048 | MS.gene017699:CDS | 50.0% | |
CTCAAGATGCTGAGGAGTTG+AGG | + | chr7.2:19124978-19124997 | MS.gene017699:CDS | 50.0% | |
CTCCACCCCAATTTCTTCAC+AGG | - | chr7.2:19125067-19125086 | None:intergenic | 50.0% | |
CTCCTGTGAAGAAATTGGGG+TGG | + | chr7.2:19125062-19125081 | MS.gene017699:CDS | 50.0% | |
CTGTGAAGAAATTGGGGTGG+AGG | + | chr7.2:19125065-19125084 | MS.gene017699:CDS | 50.0% | |
GGATTAAGCCGAGGATTTCG+CGG | - | chr7.2:19124088-19124107 | None:intergenic | 50.0% | |
TACTAACCGTGGCACGTTGA+AGG | + | chr7.2:19124928-19124947 | MS.gene017699:CDS | 50.0% | |
TAGGAGGACTCAAGATGCTG+AGG | + | chr7.2:19124970-19124989 | MS.gene017699:CDS | 50.0% | |
TCTCTCGGGAGGGATATTTG+CGG | + | chr7.2:19124721-19124740 | MS.gene017699:CDS | 50.0% | |
TCTTTCTCCTCCCAAAACGG+CGG | - | chr7.2:19124647-19124666 | None:intergenic | 50.0% | |
TGAAGAAATTGGGGTGGAGG+AGG | + | chr7.2:19125068-19125087 | MS.gene017699:CDS | 50.0% | |
TGTTAATGCGGGACAGAGTC+AGG | + | chr7.2:19125123-19125142 | MS.gene017699:CDS | 50.0% | |
TTTGAACGATGGCTTCGACG+TGG | - | chr7.2:19124235-19124254 | None:intergenic | 50.0% | |
! | GGTAGGTTTCGGATTGGGAT+TGG | - | chr7.2:19124004-19124023 | None:intergenic | 50.0% |
! | TACCTGCAATCGACTCATCC+CGG | - | chr7.2:19125317-19125336 | None:intergenic | 50.0% |
! | TCGGATTGGGATTGGGAGAA+GGG | - | chr7.2:19123996-19124015 | None:intergenic | 50.0% |
! | TGATGGCGTTGGAGTCGTAT+GGG | - | chr7.2:19124124-19124143 | None:intergenic | 50.0% |
! | TTCGGATTGGGATTGGGAGA+AGG | - | chr7.2:19123997-19124016 | None:intergenic | 50.0% |
!! | AAGAGGAGATGGGCTGTTAC+GGG | + | chr7.2:19125166-19125185 | MS.gene017699:CDS | 50.0% |
!! | ATGATATGAGCGTCGAGGAG+AGG | - | chr7.2:19124212-19124231 | None:intergenic | 50.0% |
!! | GAAGAGGAGATGGGCTGTTA+CGG | + | chr7.2:19125165-19125184 | MS.gene017699:CDS | 50.0% |
!! | GCGAGTGTTGGTTTGAACGA+TGG | - | chr7.2:19124246-19124265 | None:intergenic | 50.0% |
!! | GTTGAGGACTTTGATGGCGT+TGG | - | chr7.2:19124135-19124154 | None:intergenic | 50.0% |
!! | TGATTTACCGCCGTTTTGGG+AGG | + | chr7.2:19124637-19124656 | MS.gene017699:CDS | 50.0% |
!! | TTGATGGCGTTGGAGTCGTA+TGG | - | chr7.2:19124125-19124144 | None:intergenic | 50.0% |
!!! | CCGTTTTGGGAGGAGAAAGA+GGG | + | chr7.2:19124647-19124666 | MS.gene017699:CDS | 50.0% |
!!! | CGTTTTGGGAGGAGAAAGAG+GGG | + | chr7.2:19124648-19124667 | MS.gene017699:CDS | 50.0% |
ACGGGGACGCCTATTCAGAA+TGG | + | chr7.2:19125184-19125203 | MS.gene017699:CDS | 55.0% | |
AGGGATATTTGCGGACGGGA+TGG | + | chr7.2:19124730-19124749 | MS.gene017699:CDS | 55.0% | |
CAATCCGAAACCTACCTCGC+CGG | + | chr7.2:19124008-19124027 | MS.gene017699:CDS | 55.0% | |
CATTACGAAACCGGCGAGGT+AGG | - | chr7.2:19124021-19124040 | None:intergenic | 55.0% | |
CGCGTTCGATGTAACCGACT+TGG | - | chr7.2:19124169-19124188 | None:intergenic | 55.0% | |
GAAACCGGCGAGGTAGGTTT+CGG | - | chr7.2:19124015-19124034 | None:intergenic | 55.0% | |
GAGGTAGGGGTAGTGTAGAG+AGG | + | chr7.2:19124825-19124844 | MS.gene017699:CDS | 55.0% | |
GCAAATATCCCTCCCGAGAG+AGG | - | chr7.2:19124722-19124741 | None:intergenic | 55.0% | |
GCGTGTTTCTTTAACGGCGG+CGG | - | chr7.2:19124411-19124430 | None:intergenic | 55.0% | |
GGCGAGGTAGGTTTCGGATT+GGG | - | chr7.2:19124009-19124028 | None:intergenic | 55.0% | |
GGGATATTTGCGGACGGGAT+GGG | + | chr7.2:19124731-19124750 | MS.gene017699:CDS | 55.0% | |
TAGGGGTAGTGTAGAGAGGG+TGG | + | chr7.2:19124829-19124848 | MS.gene017699:CDS | 55.0% | |
TCGGGAGGGATATTTGCGGA+CGG | + | chr7.2:19124725-19124744 | MS.gene017699:CDS | 55.0% | |
TTGCGGACGGGATGGGATTA+GGG | + | chr7.2:19124738-19124757 | MS.gene017699:CDS | 55.0% | |
TTTGCGGACGGGATGGGATT+AGG | + | chr7.2:19124737-19124756 | MS.gene017699:CDS | 55.0% | |
! | AAGGTTCGCGGATTAAGCCG+AGG | - | chr7.2:19124097-19124116 | None:intergenic | 55.0% |
! | CGTGGATGATATGAGCGTCG+AGG | - | chr7.2:19124217-19124236 | None:intergenic | 55.0% |
! | GGGGTGGAGGAGGATTGTTT+TGG | + | chr7.2:19125078-19125097 | MS.gene017699:CDS | 55.0% |
!! | AGAGGAGATGGGCTGTTACG+GGG | + | chr7.2:19125167-19125186 | MS.gene017699:CDS | 55.0% |
!! | CTACCTCGCCGGTTTCGTAA+TGG | + | chr7.2:19124019-19124038 | MS.gene017699:CDS | 55.0% |
!!! | GCCGTTTTGGGAGGAGAAAG+AGG | + | chr7.2:19124646-19124665 | MS.gene017699:CDS | 55.0% |
ATCACCGGCCGCGAAATCCT+CGG | + | chr7.2:19124077-19124096 | MS.gene017699:CDS | 60.0% | |
CACTACTCCGGCACCATCAC+CGG | + | chr7.2:19124062-19124081 | MS.gene017699:CDS | 60.0% | |
CGGCGAGGTAGGTTTCGGAT+TGG | - | chr7.2:19124010-19124029 | None:intergenic | 60.0% | |
CGGGAGGGATATTTGCGGAC+GGG | + | chr7.2:19124726-19124745 | MS.gene017699:CDS | 60.0% | |
GACCGGGATGAGTCGATTGC+AGG | + | chr7.2:19125312-19125331 | MS.gene017699:CDS | 60.0% | |
GGGAGCTGAGTTGCGGTGTT+CGG | + | chr7.2:19125036-19125055 | MS.gene017699:CDS | 60.0% | |
TAAGCCGAGGATTTCGCGGC+CGG | - | chr7.2:19124084-19124103 | None:intergenic | 60.0% | |
TGGCCATTACGAAACCGGCG+AGG | - | chr7.2:19124025-19124044 | None:intergenic | 60.0% | |
ATCCCTCCCGAGAGAGGCTC+CGG | - | chr7.2:19124716-19124735 | None:intergenic | 65.0% | |
GAGGATTTCGCGGCCGGTGA+TGG | - | chr7.2:19124078-19124097 | None:intergenic | 65.0% | |
GTCGAGGAGAGGAGCGAGAG+CGG | - | chr7.2:19124201-19124220 | None:intergenic | 65.0% | |
GAGGAGAGGAGCGAGAGCGG+CGG | - | chr7.2:19124198-19124217 | None:intergenic | 70.0% | |
! | TTCGCGGCCGGTGATGGTGC+CGG | - | chr7.2:19124072-19124091 | None:intergenic | 70.0% |
GGCCGGAGCCTCTCTCGGGA+GGG | + | chr7.2:19124711-19124730 | MS.gene017699:CDS | 75.0% | |
TGCGCGGCCGGAGCCTCTCT+CGG | + | chr7.2:19124706-19124725 | MS.gene017699:CDS | 75.0% | |
! | CGGCCGGAGCCTCTCTCGGG+AGG | + | chr7.2:19124710-19124729 | MS.gene017699:CDS | 80.0% |
! | GCGCGGCCGGAGCCTCTCTC+GGG | + | chr7.2:19124707-19124726 | MS.gene017699:CDS | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 19123975 | 19125384 | 19123975 | ID=MS.gene017699 |
chr7.2 | mRNA | 19123975 | 19125384 | 19123975 | ID=MS.gene017699.t1;Parent=MS.gene017699 |
chr7.2 | exon | 19123975 | 19125384 | 19123975 | ID=MS.gene017699.t1.exon1;Parent=MS.gene017699.t1 |
chr7.2 | CDS | 19123975 | 19125384 | 19123975 | ID=cds.MS.gene017699.t1;Parent=MS.gene017699.t1 |
Gene Sequence |
Protein sequence |