Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene017751.t1 | XP_003624993.1 | 97.2 | 388 | 9 | 1 | 18 | 403 | 65 | 452 | 9.40E-155 | 556.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene017751.t1 | Q41558 | 59.7 | 412 | 143 | 7 | 14 | 403 | 66 | 476 | 4.1e-106 | 386.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene017751.t1 | G7KQS2 | 97.2 | 388 | 9 | 1 | 18 | 403 | 36 | 423 | 6.8e-155 | 556.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene017751.t1 | TF | bZIP |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene017751.t1 | MTR_7g089800 | 97.165 | 388 | 9 | 1 | 18 | 403 | 65 | 452 | 0.0 | 763 |
MS.gene017751.t1 | MTR_7g089800 | 97.165 | 388 | 9 | 1 | 18 | 403 | 36 | 423 | 0.0 | 763 |
MS.gene017751.t1 | MTR_8g040120 | 71.960 | 403 | 97 | 5 | 17 | 403 | 64 | 466 | 0.0 | 545 |
MS.gene017751.t1 | MTR_5g054900 | 54.415 | 419 | 145 | 9 | 18 | 403 | 29 | 434 | 2.07e-141 | 410 |
MS.gene017751.t1 | MTR_5g054900 | 59.312 | 349 | 113 | 4 | 74 | 403 | 15 | 353 | 2.29e-140 | 404 |
MS.gene017751.t1 | MTR_5g054900 | 53.938 | 419 | 143 | 10 | 18 | 403 | 59 | 460 | 5.62e-137 | 400 |
MS.gene017751.t1 | MTR_5g054900 | 58.739 | 349 | 111 | 5 | 74 | 403 | 15 | 349 | 2.19e-136 | 394 |
MS.gene017751.t1 | MTR_7g092750 | 58.232 | 328 | 124 | 5 | 85 | 403 | 39 | 362 | 4.44e-130 | 379 |
MS.gene017751.t1 | MTR_7g092750 | 58.232 | 328 | 124 | 5 | 85 | 403 | 140 | 463 | 1.90e-128 | 378 |
MS.gene017751.t1 | MTR_1g111310 | 62.739 | 314 | 101 | 4 | 95 | 403 | 405 | 707 | 9.52e-127 | 382 |
MS.gene017751.t1 | MTR_1g111310 | 57.958 | 333 | 115 | 4 | 83 | 397 | 1 | 326 | 7.29e-114 | 348 |
MS.gene017751.t1 | MTR_2g086420 | 61.458 | 288 | 101 | 2 | 116 | 403 | 192 | 469 | 6.61e-122 | 362 |
MS.gene017751.t1 | MTR_2g086420 | 61.458 | 288 | 101 | 2 | 116 | 403 | 191 | 468 | 8.13e-122 | 362 |
MS.gene017751.t1 | MTR_3g087940 | 59.000 | 300 | 110 | 3 | 109 | 403 | 70 | 361 | 6.73e-114 | 337 |
MS.gene017751.t1 | MTR_4g053250 | 49.025 | 359 | 160 | 5 | 52 | 403 | 119 | 461 | 1.23e-110 | 333 |
MS.gene017751.t1 | MTR_7g092750 | 52.439 | 328 | 117 | 6 | 85 | 403 | 140 | 437 | 3.52e-107 | 323 |
MS.gene017751.t1 | MTR_0126s0080 | 57.651 | 281 | 103 | 6 | 87 | 356 | 184 | 459 | 1.48e-101 | 310 |
MS.gene017751.t1 | MTR_3g073560 | 47.353 | 340 | 156 | 5 | 78 | 401 | 13 | 345 | 6.35e-94 | 294 |
MS.gene017751.t1 | MTR_8g091650 | 52.083 | 288 | 124 | 4 | 121 | 403 | 5 | 283 | 9.34e-94 | 283 |
MS.gene017751.t1 | MTR_8g091650 | 51.351 | 296 | 130 | 4 | 113 | 403 | 70 | 356 | 1.02e-93 | 285 |
MS.gene017751.t1 | MTR_8g091650 | 51.890 | 291 | 126 | 4 | 118 | 403 | 111 | 392 | 7.19e-93 | 285 |
MS.gene017751.t1 | MTR_5g060950 | 51.568 | 287 | 128 | 3 | 118 | 400 | 67 | 346 | 1.43e-91 | 280 |
MS.gene017751.t1 | MTR_3g044820 | 59.358 | 187 | 58 | 4 | 95 | 270 | 29 | 208 | 2.21e-72 | 226 |
MS.gene017751.t1 | MTR_1g111320 | 48.760 | 121 | 42 | 3 | 81 | 181 | 91 | 211 | 9.53e-24 | 98.6 |
MS.gene017751.t1 | MTR_1g090370 | 31.674 | 221 | 121 | 5 | 181 | 396 | 33 | 228 | 3.26e-21 | 92.0 |
MS.gene017751.t1 | MTR_8g094690 | 27.126 | 247 | 140 | 5 | 179 | 391 | 8 | 248 | 1.32e-16 | 79.7 |
MS.gene017751.t1 | MTR_2g076140 | 22.072 | 222 | 132 | 3 | 190 | 391 | 8 | 208 | 6.52e-12 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene017751.t1 | AT3G12250 | 73.414 | 331 | 77 | 4 | 83 | 403 | 1 | 330 | 4.71e-169 | 476 |
MS.gene017751.t1 | AT3G12250 | 73.414 | 331 | 77 | 4 | 83 | 403 | 1 | 330 | 4.71e-169 | 476 |
MS.gene017751.t1 | AT3G12250 | 73.414 | 331 | 77 | 4 | 83 | 403 | 1 | 330 | 4.71e-169 | 476 |
MS.gene017751.t1 | AT3G12250 | 73.414 | 331 | 77 | 4 | 83 | 403 | 1 | 330 | 4.71e-169 | 476 |
MS.gene017751.t1 | AT5G06950 | 78.859 | 298 | 62 | 1 | 106 | 403 | 34 | 330 | 4.26e-167 | 471 |
MS.gene017751.t1 | AT5G06950 | 78.859 | 298 | 62 | 1 | 106 | 403 | 34 | 330 | 4.26e-167 | 471 |
MS.gene017751.t1 | AT5G06950 | 78.859 | 298 | 62 | 1 | 106 | 403 | 34 | 330 | 4.26e-167 | 471 |
MS.gene017751.t1 | AT5G06950 | 78.859 | 298 | 62 | 1 | 106 | 403 | 34 | 330 | 4.26e-167 | 471 |
MS.gene017751.t1 | AT5G06950 | 78.859 | 298 | 62 | 1 | 106 | 403 | 34 | 330 | 4.26e-167 | 471 |
MS.gene017751.t1 | AT3G12250 | 77.852 | 298 | 65 | 1 | 106 | 403 | 7 | 303 | 1.04e-166 | 469 |
MS.gene017751.t1 | AT3G12250 | 77.852 | 298 | 65 | 1 | 106 | 403 | 28 | 324 | 3.00e-166 | 469 |
MS.gene017751.t1 | AT3G12250 | 78.188 | 298 | 64 | 1 | 106 | 403 | 59 | 355 | 2.48e-165 | 468 |
MS.gene017751.t1 | AT5G06960 | 77.083 | 288 | 65 | 1 | 116 | 403 | 24 | 310 | 3.44e-155 | 440 |
MS.gene017751.t1 | AT5G06960 | 73.292 | 322 | 77 | 3 | 90 | 403 | 10 | 330 | 4.19e-155 | 441 |
MS.gene017751.t1 | AT5G06960 | 73.292 | 322 | 77 | 3 | 90 | 403 | 10 | 330 | 4.19e-155 | 441 |
MS.gene017751.t1 | AT1G68640 | 68.562 | 299 | 91 | 2 | 107 | 403 | 155 | 452 | 2.95e-138 | 402 |
MS.gene017751.t1 | AT1G08320 | 58.104 | 327 | 124 | 4 | 80 | 403 | 13 | 329 | 2.09e-128 | 374 |
MS.gene017751.t1 | AT1G08320 | 58.104 | 327 | 124 | 4 | 80 | 403 | 13 | 329 | 2.09e-128 | 374 |
MS.gene017751.t1 | AT1G08320 | 58.104 | 327 | 124 | 4 | 80 | 403 | 137 | 453 | 1.14e-126 | 374 |
MS.gene017751.t1 | AT1G08320 | 58.104 | 327 | 124 | 4 | 80 | 403 | 137 | 453 | 1.14e-126 | 374 |
MS.gene017751.t1 | AT1G08320 | 58.104 | 327 | 124 | 4 | 80 | 403 | 137 | 453 | 1.14e-126 | 374 |
MS.gene017751.t1 | AT5G06839 | 56.954 | 302 | 117 | 3 | 115 | 403 | 115 | 416 | 6.07e-117 | 347 |
MS.gene017751.t1 | AT5G06839 | 57.475 | 301 | 116 | 4 | 115 | 403 | 115 | 415 | 2.90e-116 | 345 |
MS.gene017751.t1 | AT5G06839 | 57.475 | 301 | 116 | 4 | 115 | 403 | 158 | 458 | 4.44e-116 | 346 |
MS.gene017751.t1 | AT5G10030 | 54.688 | 320 | 132 | 4 | 89 | 403 | 51 | 362 | 3.03e-113 | 336 |
MS.gene017751.t1 | AT5G10030 | 54.688 | 320 | 132 | 4 | 89 | 403 | 51 | 362 | 3.03e-113 | 336 |
MS.gene017751.t1 | AT5G10030 | 54.688 | 320 | 132 | 4 | 89 | 403 | 51 | 362 | 3.03e-113 | 336 |
MS.gene017751.t1 | AT5G10030 | 54.688 | 320 | 132 | 4 | 89 | 403 | 51 | 362 | 3.03e-113 | 336 |
MS.gene017751.t1 | AT5G10030 | 54.688 | 320 | 132 | 4 | 89 | 403 | 51 | 362 | 3.03e-113 | 336 |
MS.gene017751.t1 | AT1G22070 | 56.393 | 305 | 124 | 3 | 103 | 403 | 83 | 382 | 1.61e-112 | 335 |
MS.gene017751.t1 | AT5G65210 | 50.716 | 349 | 141 | 5 | 78 | 403 | 26 | 366 | 1.60e-109 | 326 |
MS.gene017751.t1 | AT5G65210 | 50.716 | 349 | 141 | 5 | 78 | 403 | 26 | 366 | 1.60e-109 | 326 |
MS.gene017751.t1 | AT5G65210 | 50.716 | 349 | 141 | 5 | 78 | 403 | 26 | 366 | 1.60e-109 | 326 |
MS.gene017751.t1 | AT5G65210 | 50.716 | 349 | 141 | 5 | 78 | 403 | 26 | 366 | 1.60e-109 | 326 |
MS.gene017751.t1 | AT5G65210 | 50.716 | 349 | 141 | 5 | 78 | 403 | 26 | 366 | 1.60e-109 | 326 |
MS.gene017751.t1 | AT5G65210 | 50.716 | 349 | 141 | 5 | 78 | 403 | 26 | 366 | 1.60e-109 | 326 |
MS.gene017751.t1 | AT5G65210 | 55.667 | 300 | 120 | 3 | 109 | 403 | 5 | 296 | 2.87e-109 | 323 |
MS.gene017751.t1 | AT1G77920 | 54.870 | 308 | 124 | 3 | 99 | 403 | 71 | 366 | 7.99e-108 | 322 |
MS.gene017751.t1 | AT1G58330 | 26.244 | 221 | 145 | 5 | 185 | 393 | 9 | 223 | 4.63e-15 | 74.3 |
MS.gene017751.t1 | AT3G14880 | 24.359 | 234 | 134 | 5 | 178 | 385 | 1 | 217 | 1.71e-14 | 73.2 |
MS.gene017751.t1 | AT3G14880 | 23.651 | 241 | 134 | 5 | 178 | 385 | 1 | 224 | 2.72e-13 | 69.7 |
Find 103 sgRNAs with CRISPR-Local
Find 179 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCAACTGTTGTTCAGTTAA+AGG | 0.191657 | 7.4:-18797942 | None:intergenic |
AAAAGACGCGCTGCCAAATT+TGG | 0.207656 | 7.4:+18796184 | MS.gene017751:CDS |
CCAGATGTTGAAGCCAAATT+TGG | 0.211263 | 7.4:-18796197 | None:intergenic |
AGCCATTTGTCCCATGTAAT+TGG | 0.245079 | 7.4:-18798102 | None:intergenic |
CCAAATTTGGCTTCAACATC+TGG | 0.245789 | 7.4:+18796197 | MS.gene017751:CDS |
CCCAACCCATCAGGTGCTTC+TGG | 0.270597 | 7.4:+18798071 | MS.gene017751:CDS |
TTAGGTGCTGATATTCAATT+TGG | 0.276431 | 7.4:+18795992 | MS.gene017751:CDS |
AACCTCTCTGCTGCAATTGC+TGG | 0.307118 | 7.4:+18796140 | MS.gene017751:CDS |
GCTGTAGCTCTTGCTCTAGT+TGG | 0.316242 | 7.4:-18796754 | None:intergenic |
GCAGCTTCTTGTAAGTCATT+TGG | 0.321728 | 7.4:+18797917 | MS.gene017751:intron |
GATGGTTAGAAGAGCATAAT+AGG | 0.327313 | 7.4:+18797535 | MS.gene017751:CDS |
CTGGCGGCCATCGTGAGAAT+TGG | 0.336333 | 7.4:+18796216 | MS.gene017751:CDS |
TATTGCAGCCCTTAGTTCAT+TGG | 0.346864 | 7.4:-18797562 | None:intergenic |
TCATGTGGATTGGAGGCTTT+CGG | 0.349268 | 7.4:+18797736 | MS.gene017751:CDS |
TGGCGGCCATCGTGAGAATT+GGG | 0.354181 | 7.4:+18796217 | MS.gene017751:CDS |
AAGATGATATACAAATAAAT+AGG | 0.363414 | 7.4:-18795928 | None:intergenic |
GGAATATTTATTTCAAGTAC+TGG | 0.364580 | 7.4:+18796910 | MS.gene017751:CDS |
GAAAAGCCGACTGAGGAAAA+AGG | 0.365804 | 7.4:+18796590 | MS.gene017751:CDS |
TACCATTTCCACTCATTGAA+TGG | 0.377090 | 7.4:-18796942 | None:intergenic |
TCGGTCATCTGAACTTCTTA+AGG | 0.384806 | 7.4:+18797755 | MS.gene017751:CDS |
TTTAACTGAACAACAGTTGA+TGG | 0.387147 | 7.4:+18797944 | MS.gene017751:CDS |
CTTTCCGAGACATTGGCTAA+TGG | 0.402534 | 7.4:+18798044 | MS.gene017751:CDS |
CTCAAAATCGTGAAGCTGCC+AGG | 0.414559 | 7.4:+18796568 | MS.gene017751:CDS |
AAAGCAAATAGCCAAGCTTT+AGG | 0.415265 | 7.4:+18795974 | MS.gene017751:CDS |
TGCGAGCTCTGAGTTCTCTA+TGG | 0.421587 | 7.4:+18798654 | MS.gene017751:CDS |
ACCCATTCAATGAGTGGAAA+TGG | 0.422756 | 7.4:+18796940 | MS.gene017751:CDS |
GGAAAGCTTGGTACTCTTGA+GGG | 0.428090 | 7.4:+18798134 | MS.gene017751:CDS |
CTGTAGCTCTTGCTCTAGTT+GGG | 0.432408 | 7.4:-18796753 | None:intergenic |
GTTGCAACGTTTGCTGCCTC+AGG | 0.435590 | 7.4:-18798559 | None:intergenic |
CTGCAATGCGTCCATTCCTT+GGG | 0.435984 | 7.4:-18798015 | None:intergenic |
AAGAGCTCGAGCTGATTGTC+TGG | 0.439976 | 7.4:-18798603 | None:intergenic |
CGGTAAGTCCATTGCAAACT+CGG | 0.444428 | 7.4:+18796113 | MS.gene017751:intron |
CTCTATGGCTTGCACGGCCA+AGG | 0.444992 | 7.4:+18798669 | MS.gene017751:CDS |
TTTGAAACAGTTTACTCCCT+TGG | 0.445923 | 7.4:-18798686 | None:intergenic |
TGAAAGATCAAAAGACAAAT+CGG | 0.446752 | 7.4:+18796449 | MS.gene017751:CDS |
TGGAAATGTGGCCAATTACA+TGG | 0.448525 | 7.4:+18798091 | MS.gene017751:CDS |
GCTGCAATGCGTCCATTCCT+TGG | 0.454033 | 7.4:-18798016 | None:intergenic |
ATAGGCAAACCAATGAACTA+AGG | 0.455979 | 7.4:+18797553 | MS.gene017751:CDS |
CCAGAAGCACCTGATGGGTT+GGG | 0.456476 | 7.4:-18798071 | None:intergenic |
ACCATTTCCACTCATTGAAT+GGG | 0.458496 | 7.4:-18796941 | None:intergenic |
GCTACAGCGAGCACGCCAGC+AGG | 0.459908 | 7.4:+18796769 | MS.gene017751:CDS |
AAAAGACAAATCGGATCAAA+AGG | 0.461930 | 7.4:+18796458 | MS.gene017751:CDS |
ACCTCTCTGCTGCAATTGCT+GGG | 0.464916 | 7.4:+18796141 | MS.gene017751:CDS |
TCCAGAAGCACCTGATGGGT+TGG | 0.465437 | 7.4:-18798072 | None:intergenic |
CTCAATTTGAAGATATCTAC+AGG | 0.469063 | 7.4:+18797637 | MS.gene017751:CDS |
CACATGAAACACCTCTCAGC+TGG | 0.482882 | 7.4:-18797720 | None:intergenic |
GGGACAAATGGCTATGGCCA+TGG | 0.486901 | 7.4:+18798112 | MS.gene017751:CDS |
GGCCAATTACATGGGACAAA+TGG | 0.487544 | 7.4:+18798100 | MS.gene017751:CDS |
TGCAACAATTAGAGAGCAGC+AGG | 0.488377 | 7.4:+18796720 | MS.gene017751:CDS |
TGCTTTCATTTGATTAAACA+TGG | 0.488620 | 7.4:-18795957 | None:intergenic |
AATGGTTCACCCAACCCATC+AGG | 0.491558 | 7.4:+18798062 | MS.gene017751:CDS |
GAGAACTCAGAGCTCGCAGC+CGG | 0.499226 | 7.4:-18798649 | None:intergenic |
CTGCAATAAATTCTCATGCT+GGG | 0.499442 | 7.4:+18797577 | MS.gene017751:CDS |
AGGTTAATCGTGGATTCATA+AGG | 0.503046 | 7.4:-18795908 | None:intergenic |
AAACGTTGCAACAAATGCTT+CGG | 0.506047 | 7.4:+18798570 | MS.gene017751:CDS |
GAGAGGTGTTTCATGTGGAT+TGG | 0.507638 | 7.4:+18797726 | MS.gene017751:CDS |
TGTTCAGACGTTAAGACGGC+TGG | 0.509648 | 7.4:+18796545 | MS.gene017751:intron |
GCTGCAATAAATTCTCATGC+TGG | 0.516591 | 7.4:+18797576 | MS.gene017751:CDS |
AGGTGTTTCATGTGGATTGG+AGG | 0.518347 | 7.4:+18797729 | MS.gene017751:CDS |
GAATATCAGCACCTAAAGCT+TGG | 0.527661 | 7.4:-18795985 | None:intergenic |
GGGAGAGTCCAACATGGCTG+AGG | 0.529600 | 7.4:+18796238 | MS.gene017751:CDS |
GCAATCACTTTCCGAGACAT+TGG | 0.530262 | 7.4:+18798037 | MS.gene017751:CDS |
TACAGAAGACAAGAATCAAA+TGG | 0.538000 | 7.4:+18796286 | MS.gene017751:CDS |
CAATAAGTGATTATTTCTCC+CGG | 0.538111 | 7.4:+18798630 | MS.gene017751:CDS |
GCTATGGCCATGGGAAAGCT+TGG | 0.544267 | 7.4:+18798122 | MS.gene017751:CDS |
TTAACTGAACAACAGTTGAT+GGG | 0.552406 | 7.4:+18797945 | MS.gene017751:CDS |
GGACAAATGGCTATGGCCAT+GGG | 0.556028 | 7.4:+18798113 | MS.gene017751:CDS |
AGACGCTCTTTCCCAAGGAA+TGG | 0.556679 | 7.4:+18798004 | MS.gene017751:CDS |
GGGAAAGCTTGGTACTCTTG+AGG | 0.558797 | 7.4:+18798133 | MS.gene017751:CDS |
GGTTATATCCGAGTTTGCAA+TGG | 0.560594 | 7.4:-18796121 | None:intergenic |
AGCGCTTCCCTCAGCCATGT+TGG | 0.566699 | 7.4:-18796246 | None:intergenic |
ACATTTCCAGAAGCACCTGA+TGG | 0.566763 | 7.4:-18798077 | None:intergenic |
GAAGATATCTACAGGCTGAA+AGG | 0.567290 | 7.4:+18797645 | MS.gene017751:CDS |
TCCACATTCTATCAGGAATG+TGG | 0.571375 | 7.4:+18797691 | MS.gene017751:CDS |
TCTTGAGGGATTTCTTCGCC+AGG | 0.573076 | 7.4:+18798148 | MS.gene017751:CDS |
ATCAGGTGCTTCTGGAAATG+TGG | 0.573606 | 7.4:+18798079 | MS.gene017751:CDS |
ACAAATAAATAGGTTAATCG+TGG | 0.574357 | 7.4:-18795918 | None:intergenic |
TCTATGGCTTGCACGGCCAA+GGG | 0.578391 | 7.4:+18798670 | MS.gene017751:CDS |
TAGGCAAACCAATGAACTAA+GGG | 0.579382 | 7.4:+18797554 | MS.gene017751:CDS |
CATTTCCAGAAGCACCTGAT+GGG | 0.580742 | 7.4:-18798076 | None:intergenic |
CAGCTGAGAGGTGTTTCATG+TGG | 0.583907 | 7.4:+18797721 | MS.gene017751:CDS |
TGCAATAAATTCTCATGCTG+GGG | 0.590748 | 7.4:+18797578 | MS.gene017751:CDS |
TCCACATTCCTGATAGAATG+TGG | 0.593998 | 7.4:-18797692 | None:intergenic |
TTACATGGGACAAATGGCTA+TGG | 0.598092 | 7.4:+18798106 | MS.gene017751:CDS |
AGAACTCAGAGCTCGCAGCC+GGG | 0.599159 | 7.4:-18798648 | None:intergenic |
TGAAATTGTCGACAATGGTA+CGG | 0.603907 | 7.4:-18797611 | None:intergenic |
TGAGTTCTCTATGGCTTGCA+CGG | 0.606772 | 7.4:+18798663 | MS.gene017751:CDS |
GCTGAAGACGCTCTTTCCCA+AGG | 0.608444 | 7.4:+18797999 | MS.gene017751:CDS |
GAGCAGACCCATTCAATGAG+TGG | 0.614912 | 7.4:+18796934 | MS.gene017751:CDS |
GGAGAGTCCAACATGGCTGA+GGG | 0.616774 | 7.4:+18796239 | MS.gene017751:CDS |
TGAACCATTAGCCAATGTCT+CGG | 0.617863 | 7.4:-18798048 | None:intergenic |
GGCGGCCATCGTGAGAATTG+GGG | 0.627011 | 7.4:+18796218 | MS.gene017751:CDS |
AAGAGTACCAAGCTTTCCCA+TGG | 0.628858 | 7.4:-18798129 | None:intergenic |
GGAAATGTGGCCAATTACAT+GGG | 0.630650 | 7.4:+18798092 | MS.gene017751:CDS |
AATTTGGCTTCAACATCTGG+CGG | 0.636343 | 7.4:+18796200 | MS.gene017751:CDS |
AGTCATGAAATTGTCGACAA+TGG | 0.650887 | 7.4:-18797616 | None:intergenic |
ACTCTCCCCAATTCTCACGA+TGG | 0.657176 | 7.4:-18796223 | None:intergenic |
CTGCCAGGAAAAGCCGACTG+AGG | 0.660519 | 7.4:+18796583 | MS.gene017751:CDS |
GTTTATAGGCTGATAACCTG+AGG | 0.665954 | 7.4:+18798543 | MS.gene017751:intron |
ACCCAGCAATTGCAGCAGAG+AGG | 0.678759 | 7.4:-18796142 | None:intergenic |
TGTGGAAGACTCCAGCTGAG+AGG | 0.690086 | 7.4:+18797709 | MS.gene017751:CDS |
GAATTGGGGAGAGTCCAACA+TGG | 0.702168 | 7.4:+18796232 | MS.gene017751:CDS |
TTGATGCAGAATACGCACGA+TGG | 0.731911 | 7.4:+18797517 | MS.gene017751:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAGATGATATACAAATAAAT+AGG | - | chr7.4:18795931-18795950 | None:intergenic | 15.0% |
!! | ATTTACAATTTAACAGAAAA+AGG | - | chr7.4:18796621-18796640 | None:intergenic | 15.0% |
!!! | TTGATTATTTATCTTTTCTA+GGG | + | chr7.4:18796889-18796908 | MS.gene017751:intron | 15.0% |
!!! | TTGCAATTTATTGATTTTAT+TGG | - | chr7.4:18796044-18796063 | None:intergenic | 15.0% |
!!! | TTTGATTATTTATCTTTTCT+AGG | + | chr7.4:18796888-18796907 | MS.gene017751:intron | 15.0% |
!! | AAATATCTGTATATGTTAAG+AGG | - | chr7.4:18797210-18797229 | None:intergenic | 20.0% |
!! | ATGAAAAAAGAAACATATCA+CGG | - | chr7.4:18797153-18797172 | None:intergenic | 20.0% |
!! | ATTGCTTTACTTTAATCATA+CGG | + | chr7.4:18796311-18796330 | MS.gene017751:intron | 20.0% |
!! | CAAAAGCAAAATTTAACATA+TGG | - | chr7.4:18796527-18796546 | None:intergenic | 20.0% |
!! | TATACTCTTTATCACTTTAT+TGG | - | chr7.4:18798362-18798381 | None:intergenic | 20.0% |
!!! | AAGAGGTTTGATATTTTTAA+AGG | - | chr7.4:18797193-18797212 | None:intergenic | 20.0% |
!!! | GATATTTTTAAAGGAAATGT+TGG | - | chr7.4:18797184-18797203 | None:intergenic | 20.0% |
!!! | TGTTAGAACTTATTTTTAGT+CGG | + | chr7.4:18797248-18797267 | MS.gene017751:intron | 20.0% |
! | AAAAGGAAAACAAAAGTGAA+TGG | - | chr7.4:18798516-18798535 | None:intergenic | 25.0% |
! | AATTAATTGTGTACCTTAGA+GGG | + | chr7.4:18798386-18798405 | MS.gene017751:intron | 25.0% |
! | ACAAATAAATAGGTTAATCG+TGG | - | chr7.4:18795921-18795940 | None:intergenic | 25.0% |
! | TGAAAGATCAAAAGACAAAT+CGG | + | chr7.4:18796449-18796468 | MS.gene017751:CDS | 25.0% |
! | TGCTTTCATTTGATTAAACA+TGG | - | chr7.4:18795960-18795979 | None:intergenic | 25.0% |
!! | GGAATATTTATTTCAAGTAC+TGG | + | chr7.4:18796910-18796929 | MS.gene017751:CDS | 25.0% |
!! | GTATGAAAAAAACATGCTTT+TGG | - | chr7.4:18796373-18796392 | None:intergenic | 25.0% |
!! | TAACATTGAATTTAAAGCTG+TGG | + | chr7.4:18797070-18797089 | MS.gene017751:intron | 25.0% |
!!! | AATGAAGATGGCTATTTTAT+TGG | - | chr7.4:18796397-18796416 | None:intergenic | 25.0% |
!!! | GATTAAGTGTTGGATTTTTA+AGG | + | chr7.4:18797840-18797859 | MS.gene017751:intron | 25.0% |
AAAAATTCCTCCAAGTAGAA+GGG | - | chr7.4:18797031-18797050 | None:intergenic | 30.0% | |
AAAAGACAAATCGGATCAAA+AGG | + | chr7.4:18796458-18796477 | MS.gene017751:CDS | 30.0% | |
ATCAACTGTTGTTCAGTTAA+AGG | - | chr7.4:18797945-18797964 | None:intergenic | 30.0% | |
ATGCAAAATCCATTAACTCT+TGG | + | chr7.4:18797102-18797121 | MS.gene017751:intron | 30.0% | |
ATTCTTCTTTCCATTCATTC+AGG | + | chr7.4:18796691-18796710 | MS.gene017751:intron | 30.0% | |
CAAAAACGTCAACACAATTT+AGG | - | chr7.4:18797477-18797496 | None:intergenic | 30.0% | |
CCATAGAGAATAAACAAATG+AGG | - | chr7.4:18797790-18797809 | None:intergenic | 30.0% | |
CCTCATTTGTTTATTCTCTA+TGG | + | chr7.4:18797787-18797806 | MS.gene017751:intron | 30.0% | |
CTCAATTTGAAGATATCTAC+AGG | + | chr7.4:18797637-18797656 | MS.gene017751:CDS | 30.0% | |
CTGCAAAACAAAAATGAAGA+TGG | - | chr7.4:18796409-18796428 | None:intergenic | 30.0% | |
GAAATAGACAGTTAATTACC+TGG | - | chr7.4:18798169-18798188 | None:intergenic | 30.0% | |
GAATTAATTGTGTACCTTAG+AGG | + | chr7.4:18798385-18798404 | MS.gene017751:intron | 30.0% | |
GATAACGATTGATTAAGTGT+TGG | + | chr7.4:18797830-18797849 | MS.gene017751:intron | 30.0% | |
GTCTTTAATCACACATATGA+TGG | - | chr7.4:18797342-18797361 | None:intergenic | 30.0% | |
GTTATTGAATGAAACTGTGT+CGG | - | chr7.4:18798255-18798274 | None:intergenic | 30.0% | |
TACAGAAGACAAGAATCAAA+TGG | + | chr7.4:18796286-18796305 | MS.gene017751:CDS | 30.0% | |
TTAACTGAACAACAGTTGAT+GGG | + | chr7.4:18797945-18797964 | MS.gene017751:CDS | 30.0% | |
TTATCAGCCTATAAACATGA+AGG | - | chr7.4:18798539-18798558 | None:intergenic | 30.0% | |
TTTAACTGAACAACAGTTGA+TGG | + | chr7.4:18797944-18797963 | MS.gene017751:CDS | 30.0% | |
! | CAATAAGTGATTATTTCTCC+CGG | + | chr7.4:18798630-18798649 | MS.gene017751:CDS | 30.0% |
! | GTTATTCGTACATCTAAAAC+TGG | + | chr7.4:18797882-18797901 | MS.gene017751:intron | 30.0% |
! | TATCTCAACTTCCTTCTTTT+TGG | + | chr7.4:18798191-18798210 | MS.gene017751:intron | 30.0% |
! | TCCTTTTCCTTCATGTTTAT+AGG | + | chr7.4:18798529-18798548 | MS.gene017751:intron | 30.0% |
! | TTCTACTTGGAGGAATTTTT+CGG | + | chr7.4:18797031-18797050 | MS.gene017751:intron | 30.0% |
! | TTTGTCTTTTGATCTTTCAC+TGG | - | chr7.4:18796448-18796467 | None:intergenic | 30.0% |
!! | CTAAATTGTGTTGACGTTTT+TGG | + | chr7.4:18797475-18797494 | MS.gene017751:intron | 30.0% |
!! | TCAATTTGGTGCTTTAAGTA+AGG | + | chr7.4:18796006-18796025 | MS.gene017751:intron | 30.0% |
!! | TCTTTGTTGCTATTTCATTC+TGG | + | chr7.4:18796841-18796860 | MS.gene017751:intron | 30.0% |
!! | TTAGGTGCTGATATTCAATT+TGG | + | chr7.4:18795992-18796011 | MS.gene017751:CDS | 30.0% |
!!! | AGAGTTAATGGATTTTGCAT+TGG | - | chr7.4:18797102-18797121 | None:intergenic | 30.0% |
AAACGTTGCAACAAATGCTT+CGG | + | chr7.4:18798570-18798589 | MS.gene017751:CDS | 35.0% | |
AAAGCAAATAGCCAAGCTTT+AGG | + | chr7.4:18795974-18795993 | MS.gene017751:CDS | 35.0% | |
AAATAGCAAAACAAACCTGC+TGG | - | chr7.4:18796787-18796806 | None:intergenic | 35.0% | |
ACCATTTCCACTCATTGAAT+GGG | - | chr7.4:18796944-18796963 | None:intergenic | 35.0% | |
AGGTTAATCGTGGATTCATA+AGG | - | chr7.4:18795911-18795930 | None:intergenic | 35.0% | |
AGTCATGAAATTGTCGACAA+TGG | - | chr7.4:18797619-18797638 | None:intergenic | 35.0% | |
ATAGGCAAACCAATGAACTA+AGG | + | chr7.4:18797553-18797572 | MS.gene017751:CDS | 35.0% | |
CATACGGTTTATTCTGAATC+TGG | + | chr7.4:18796327-18796346 | MS.gene017751:intron | 35.0% | |
CTGCAATAAATTCTCATGCT+GGG | + | chr7.4:18797577-18797596 | MS.gene017751:CDS | 35.0% | |
GAAAAATTCCTCCAAGTAGA+AGG | - | chr7.4:18797032-18797051 | None:intergenic | 35.0% | |
GAAAATAGTAGTCTGTAGCA+TGG | + | chr7.4:18797411-18797430 | MS.gene017751:intron | 35.0% | |
GCCTATAAACATGAAGGAAA+AGG | - | chr7.4:18798533-18798552 | None:intergenic | 35.0% | |
TACCATTTCCACTCATTGAA+TGG | - | chr7.4:18796945-18796964 | None:intergenic | 35.0% | |
TAGGCAAACCAATGAACTAA+GGG | + | chr7.4:18797554-18797573 | MS.gene017751:CDS | 35.0% | |
TCTTCACTTGCATGTATGTA+CGG | + | chr7.4:18796093-18796112 | MS.gene017751:intron | 35.0% | |
TGAAATTGTCGACAATGGTA+CGG | - | chr7.4:18797614-18797633 | None:intergenic | 35.0% | |
TGCAATAAATTCTCATGCTG+GGG | + | chr7.4:18797578-18797597 | MS.gene017751:CDS | 35.0% | |
TTTGTCAAGCCAAGAGTTAA+TGG | - | chr7.4:18797114-18797133 | None:intergenic | 35.0% | |
! | CTTTTGTTCAGACGTTAAGA+CGG | + | chr7.4:18796541-18796560 | MS.gene017751:intron | 35.0% |
! | GATGGTTAGAAGAGCATAAT+AGG | + | chr7.4:18797535-18797554 | MS.gene017751:CDS | 35.0% |
! | GATGTTTTCCACATTCTATC+AGG | + | chr7.4:18797684-18797703 | MS.gene017751:CDS | 35.0% |
!!! | TTTTGTTTTGCAGCCTGAAA+GGG | + | chr7.4:18796416-18796435 | MS.gene017751:intron | 35.0% |
!!! | TTTTTGTTTTGCAGCCTGAA+AGG | + | chr7.4:18796415-18796434 | MS.gene017751:intron | 35.0% |
ACATATCACGGCAAATGTCA+TGG | - | chr7.4:18797141-18797160 | None:intergenic | 40.0% | |
ACCCATTCAATGAGTGGAAA+TGG | + | chr7.4:18796940-18796959 | MS.gene017751:CDS | 40.0% | |
AGCCATTTGTCCCATGTAAT+TGG | - | chr7.4:18798105-18798124 | None:intergenic | 40.0% | |
ATAGTAGTCTGTAGCATGGA+TGG | + | chr7.4:18797415-18797434 | MS.gene017751:intron | 40.0% | |
CCAGATGTTGAAGCCAAATT+TGG | - | chr7.4:18796200-18796219 | None:intergenic | 40.0% | |
GAAGATATCTACAGGCTGAA+AGG | + | chr7.4:18797645-18797664 | MS.gene017751:CDS | 40.0% | |
GAATATCAGCACCTAAAGCT+TGG | - | chr7.4:18795988-18796007 | None:intergenic | 40.0% | |
GCAGCTTCTTGTAAGTCATT+TGG | + | chr7.4:18797917-18797936 | MS.gene017751:intron | 40.0% | |
GCTGCAATAAATTCTCATGC+TGG | + | chr7.4:18797576-18797595 | MS.gene017751:CDS | 40.0% | |
GGAAATGTGGCCAATTACAT+GGG | + | chr7.4:18798092-18798111 | MS.gene017751:CDS | 40.0% | |
GGATACACGGTATACAACAA+CGG | - | chr7.4:18798285-18798304 | None:intergenic | 40.0% | |
GGTTATATCCGAGTTTGCAA+TGG | - | chr7.4:18796124-18796143 | None:intergenic | 40.0% | |
GTTTATAGGCTGATAACCTG+AGG | + | chr7.4:18798543-18798562 | MS.gene017751:intron | 40.0% | |
TACAGACACAAACACGACAA+CGG | - | chr7.4:18798311-18798330 | None:intergenic | 40.0% | |
TATTGCAGCCCTTAGTTCAT+TGG | - | chr7.4:18797565-18797584 | None:intergenic | 40.0% | |
TCCACATTCCTGATAGAATG+TGG | - | chr7.4:18797695-18797714 | None:intergenic | 40.0% | |
TCCACATTCTATCAGGAATG+TGG | + | chr7.4:18797691-18797710 | MS.gene017751:CDS | 40.0% | |
TCGGTCATCTGAACTTCTTA+AGG | + | chr7.4:18797755-18797774 | MS.gene017751:CDS | 40.0% | |
TGAACCATTAGCCAATGTCT+CGG | - | chr7.4:18798051-18798070 | None:intergenic | 40.0% | |
TGCACATATGCCTGAATGAA+TGG | - | chr7.4:18796704-18796723 | None:intergenic | 40.0% | |
TGGAAATGTGGCCAATTACA+TGG | + | chr7.4:18798091-18798110 | MS.gene017751:CDS | 40.0% | |
TGTTTCTTCTGCATGCAATC+TGG | + | chr7.4:18796653-18796672 | MS.gene017751:intron | 40.0% | |
TTACATGGGACAAATGGCTA+TGG | + | chr7.4:18798106-18798125 | MS.gene017751:CDS | 40.0% | |
! | AATTTGGCTTCAACATCTGG+CGG | + | chr7.4:18796200-18796219 | MS.gene017751:CDS | 40.0% |
! | ACATGCAAGTGAAGAGTGTA+AGG | - | chr7.4:18796088-18796107 | None:intergenic | 40.0% |
! | CCAAATTTGGCTTCAACATC+TGG | + | chr7.4:18796197-18796216 | MS.gene017751:CDS | 40.0% |
! | CTCAACTTCCTTCTTTTTGG+AGG | + | chr7.4:18798194-18798213 | MS.gene017751:intron | 40.0% |
!!! | TTTGTTTTGCAGCCTGAAAG+GGG | + | chr7.4:18796417-18796436 | MS.gene017751:intron | 40.0% |
AAAAGACGCGCTGCCAAATT+TGG | + | chr7.4:18796184-18796203 | MS.gene017751:CDS | 45.0% | |
ACACAAACACGACAACGGAA+TGG | - | chr7.4:18798306-18798325 | None:intergenic | 45.0% | |
ACGACAACGGAATGGATACA+CGG | - | chr7.4:18798298-18798317 | None:intergenic | 45.0% | |
CGGTAAGTCCATTGCAAACT+CGG | + | chr7.4:18796113-18796132 | MS.gene017751:intron | 45.0% | |
CTGTAGCTCTTGCTCTAGTT+GGG | - | chr7.4:18796756-18796775 | None:intergenic | 45.0% | |
GAAAAGCCGACTGAGGAAAA+AGG | + | chr7.4:18796590-18796609 | MS.gene017751:CDS | 45.0% | |
GCAATCACTTTCCGAGACAT+TGG | + | chr7.4:18798037-18798056 | MS.gene017751:CDS | 45.0% | |
GCATCAAAGTCCCTTCTACT+TGG | + | chr7.4:18797018-18797037 | MS.gene017751:intron | 45.0% | |
GGAAAGCTTGGTACTCTTGA+GGG | + | chr7.4:18798134-18798153 | MS.gene017751:CDS | 45.0% | |
GGCCAATTACATGGGACAAA+TGG | + | chr7.4:18798100-18798119 | MS.gene017751:CDS | 45.0% | |
GTAATGCATCTCACCCTCTA+AGG | - | chr7.4:18798402-18798421 | None:intergenic | 45.0% | |
TCAAAGTCCCTTCTACTTGG+AGG | + | chr7.4:18797021-18797040 | MS.gene017751:intron | 45.0% | |
TCAAGCTTGCGTCACACAAT+TGG | - | chr7.4:18796986-18797005 | None:intergenic | 45.0% | |
TGCAACAATTAGAGAGCAGC+AGG | + | chr7.4:18796720-18796739 | MS.gene017751:CDS | 45.0% | |
TTGATGCAGAATACGCACGA+TGG | + | chr7.4:18797517-18797536 | MS.gene017751:CDS | 45.0% | |
! | ATCAGGTGCTTCTGGAAATG+TGG | + | chr7.4:18798079-18798098 | MS.gene017751:CDS | 45.0% |
! | CTTTCCGAGACATTGGCTAA+TGG | + | chr7.4:18798044-18798063 | MS.gene017751:CDS | 45.0% |
! | GCTGTACCTTTTTCCTCAGT+CGG | - | chr7.4:18796599-18796618 | None:intergenic | 45.0% |
! | TGAGTTCTCTATGGCTTGCA+CGG | + | chr7.4:18798663-18798682 | MS.gene017751:CDS | 45.0% |
!! | AAGAGTACCAAGCTTTCCCA+TGG | - | chr7.4:18798132-18798151 | None:intergenic | 45.0% |
!! | ACATTTCCAGAAGCACCTGA+TGG | - | chr7.4:18798080-18798099 | None:intergenic | 45.0% |
!! | AGGTGTTTCATGTGGATTGG+AGG | + | chr7.4:18797729-18797748 | MS.gene017751:CDS | 45.0% |
!! | CATTTCCAGAAGCACCTGAT+GGG | - | chr7.4:18798079-18798098 | None:intergenic | 45.0% |
!! | GAGAGGTGTTTCATGTGGAT+TGG | + | chr7.4:18797726-18797745 | MS.gene017751:CDS | 45.0% |
!! | TCATGTGGATTGGAGGCTTT+CGG | + | chr7.4:18797736-18797755 | MS.gene017751:CDS | 45.0% |
!! | TTGTTTTGCAGCCTGAAAGG+GGG | + | chr7.4:18796418-18796437 | MS.gene017751:intron | 45.0% |
!! | TTTTTGGTGTGCAGGTGCAA+TGG | + | chr7.4:18797491-18797510 | MS.gene017751:intron | 45.0% |
!!! | TGTTGACGTTTTTGGTGTGC+AGG | + | chr7.4:18797483-18797502 | MS.gene017751:intron | 45.0% |
AACCTCTCTGCTGCAATTGC+TGG | + | chr7.4:18796140-18796159 | MS.gene017751:CDS | 50.0% | |
AAGAGCTCGAGCTGATTGTC+TGG | - | chr7.4:18798606-18798625 | None:intergenic | 50.0% | |
AATGGTTCACCCAACCCATC+AGG | + | chr7.4:18798062-18798081 | MS.gene017751:CDS | 50.0% | |
ACCTCTCTGCTGCAATTGCT+GGG | + | chr7.4:18796141-18796160 | MS.gene017751:CDS | 50.0% | |
ACTCTCCCCAATTCTCACGA+TGG | - | chr7.4:18796226-18796245 | None:intergenic | 50.0% | |
AGACGCTCTTTCCCAAGGAA+TGG | + | chr7.4:18798004-18798023 | MS.gene017751:CDS | 50.0% | |
AGCTTGCGTCACACAATTGG+AGG | - | chr7.4:18796983-18797002 | None:intergenic | 50.0% | |
CACATGAAACACCTCTCAGC+TGG | - | chr7.4:18797723-18797742 | None:intergenic | 50.0% | |
CACTCACACATGTCGAACAC+CGG | - | chr7.4:18798225-18798244 | None:intergenic | 50.0% | |
CTCAAAATCGTGAAGCTGCC+AGG | + | chr7.4:18796568-18796587 | MS.gene017751:CDS | 50.0% | |
CTGCAATGCGTCCATTCCTT+GGG | - | chr7.4:18798018-18798037 | None:intergenic | 50.0% | |
GAATTGGGGAGAGTCCAACA+TGG | + | chr7.4:18796232-18796251 | MS.gene017751:CDS | 50.0% | |
GAGCAGACCCATTCAATGAG+TGG | + | chr7.4:18796934-18796953 | MS.gene017751:CDS | 50.0% | |
GCTGTAGCTCTTGCTCTAGT+TGG | - | chr7.4:18796757-18796776 | None:intergenic | 50.0% | |
GGACAAATGGCTATGGCCAT+GGG | + | chr7.4:18798113-18798132 | MS.gene017751:CDS | 50.0% | |
GGGAAAGCTTGGTACTCTTG+AGG | + | chr7.4:18798133-18798152 | MS.gene017751:CDS | 50.0% | |
TCTTGAGGGATTTCTTCGCC+AGG | + | chr7.4:18798148-18798167 | MS.gene017751:CDS | 50.0% | |
TGTTCAGACGTTAAGACGGC+TGG | + | chr7.4:18796545-18796564 | MS.gene017751:intron | 50.0% | |
! | TGTTTTGCAGCCTGAAAGGG+GGG | + | chr7.4:18796419-18796438 | MS.gene017751:intron | 50.0% |
!! | CAGCTGAGAGGTGTTTCATG+TGG | + | chr7.4:18797721-18797740 | MS.gene017751:CDS | 50.0% |
!! | CTTCTTTTTGGAGGCGTGTC+CGG | + | chr7.4:18798203-18798222 | MS.gene017751:intron | 50.0% |
!! | TGCGAGCTCTGAGTTCTCTA+TGG | + | chr7.4:18798654-18798673 | MS.gene017751:CDS | 50.0% |
!! | TTTCCTCAGTCGGCTTTTCC+TGG | - | chr7.4:18796589-18796608 | None:intergenic | 50.0% |
ACCCAGCAATTGCAGCAGAG+AGG | - | chr7.4:18796145-18796164 | None:intergenic | 55.0% | |
CGGACACGCCTCCAAAAAGA+AGG | - | chr7.4:18798205-18798224 | None:intergenic | 55.0% | |
GCTATGGCCATGGGAAAGCT+TGG | + | chr7.4:18798122-18798141 | MS.gene017751:CDS | 55.0% | |
GCTGAAGACGCTCTTTCCCA+AGG | + | chr7.4:18797999-18798018 | MS.gene017751:CDS | 55.0% | |
GCTGCAATGCGTCCATTCCT+TGG | - | chr7.4:18798019-18798038 | None:intergenic | 55.0% | |
GGAGAGTCCAACATGGCTGA+GGG | + | chr7.4:18796239-18796258 | MS.gene017751:CDS | 55.0% | |
GGGACAAATGGCTATGGCCA+TGG | + | chr7.4:18798112-18798131 | MS.gene017751:CDS | 55.0% | |
TCACTGGATTCCCCCCTTTC+AGG | - | chr7.4:18796432-18796451 | None:intergenic | 55.0% | |
TGGCGGCCATCGTGAGAATT+GGG | + | chr7.4:18796217-18796236 | MS.gene017751:CDS | 55.0% | |
TGTGGAAGACTCCAGCTGAG+AGG | + | chr7.4:18797709-18797728 | MS.gene017751:CDS | 55.0% | |
! | GTTGCAACGTTTGCTGCCTC+AGG | - | chr7.4:18798562-18798581 | None:intergenic | 55.0% |
! | TCTATGGCTTGCACGGCCAA+GGG | + | chr7.4:18798670-18798689 | MS.gene017751:CDS | 55.0% |
!! | CCAGAAGCACCTGATGGGTT+GGG | - | chr7.4:18798074-18798093 | None:intergenic | 55.0% |
!! | TCCAGAAGCACCTGATGGGT+TGG | - | chr7.4:18798075-18798094 | None:intergenic | 55.0% |
AGAACTCAGAGCTCGCAGCC+GGG | - | chr7.4:18798651-18798670 | None:intergenic | 60.0% | |
AGCGCTTCCCTCAGCCATGT+TGG | - | chr7.4:18796249-18796268 | None:intergenic | 60.0% | |
CCCAACCCATCAGGTGCTTC+TGG | + | chr7.4:18798071-18798090 | MS.gene017751:CDS | 60.0% | |
CTGCCAGGAAAAGCCGACTG+AGG | + | chr7.4:18796583-18796602 | MS.gene017751:CDS | 60.0% | |
CTGGCGGCCATCGTGAGAAT+TGG | + | chr7.4:18796216-18796235 | MS.gene017751:CDS | 60.0% | |
GAGAACTCAGAGCTCGCAGC+CGG | - | chr7.4:18798652-18798671 | None:intergenic | 60.0% | |
GGCGGCCATCGTGAGAATTG+GGG | + | chr7.4:18796218-18796237 | MS.gene017751:CDS | 60.0% | |
GGGAGAGTCCAACATGGCTG+AGG | + | chr7.4:18796238-18796257 | MS.gene017751:CDS | 60.0% | |
! | CTCTATGGCTTGCACGGCCA+AGG | + | chr7.4:18798669-18798688 | MS.gene017751:CDS | 60.0% |
GCTACAGCGAGCACGCCAGC+AGG | + | chr7.4:18796769-18796788 | MS.gene017751:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.4 | gene | 18795908 | 18798697 | 18795908 | ID=MS.gene017751 |
chr7.4 | mRNA | 18795908 | 18798697 | 18795908 | ID=MS.gene017751.t1;Parent=MS.gene017751 |
chr7.4 | exon | 18795908 | 18796022 | 18795908 | ID=MS.gene017751.t1.exon1;Parent=MS.gene017751.t1 |
chr7.4 | CDS | 18795908 | 18796022 | 18795908 | ID=cds.MS.gene017751.t1;Parent=MS.gene017751.t1 |
chr7.4 | exon | 18796120 | 18796307 | 18796120 | ID=MS.gene017751.t1.exon2;Parent=MS.gene017751.t1 |
chr7.4 | CDS | 18796120 | 18796307 | 18796120 | ID=cds.MS.gene017751.t1;Parent=MS.gene017751.t1 |
chr7.4 | exon | 18796429 | 18796479 | 18796429 | ID=MS.gene017751.t1.exon3;Parent=MS.gene017751.t1 |
chr7.4 | CDS | 18796429 | 18796479 | 18796429 | ID=cds.MS.gene017751.t1;Parent=MS.gene017751.t1 |
chr7.4 | exon | 18796552 | 18796611 | 18796552 | ID=MS.gene017751.t1.exon4;Parent=MS.gene017751.t1 |
chr7.4 | CDS | 18796552 | 18796611 | 18796552 | ID=cds.MS.gene017751.t1;Parent=MS.gene017751.t1 |
chr7.4 | exon | 18796713 | 18796790 | 18796713 | ID=MS.gene017751.t1.exon5;Parent=MS.gene017751.t1 |
chr7.4 | CDS | 18796713 | 18796790 | 18796713 | ID=cds.MS.gene017751.t1;Parent=MS.gene017751.t1 |
chr7.4 | exon | 18796910 | 18796961 | 18796910 | ID=MS.gene017751.t1.exon6;Parent=MS.gene017751.t1 |
chr7.4 | CDS | 18796910 | 18796961 | 18796910 | ID=cds.MS.gene017751.t1;Parent=MS.gene017751.t1 |
chr7.4 | exon | 18797505 | 18797776 | 18797505 | ID=MS.gene017751.t1.exon7;Parent=MS.gene017751.t1 |
chr7.4 | CDS | 18797505 | 18797776 | 18797505 | ID=cds.MS.gene017751.t1;Parent=MS.gene017751.t1 |
chr7.4 | exon | 18797921 | 18798169 | 18797921 | ID=MS.gene017751.t1.exon8;Parent=MS.gene017751.t1 |
chr7.4 | CDS | 18797921 | 18798169 | 18797921 | ID=cds.MS.gene017751.t1;Parent=MS.gene017751.t1 |
chr7.4 | exon | 18798551 | 18798697 | 18798551 | ID=MS.gene017751.t1.exon9;Parent=MS.gene017751.t1 |
chr7.4 | CDS | 18798551 | 18798697 | 18798551 | ID=cds.MS.gene017751.t1;Parent=MS.gene017751.t1 |
Gene Sequence |
Protein sequence |