AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene017872

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene017872.t1 MTR_7g091370 98.283 233 4 0 1 233 1 233 2.52e-172 473
MS.gene017872.t1 MTR_5g089170 43.781 201 103 2 15 205 18 218 2.44e-51 167
MS.gene017872.t1 MTR_5g017470 43.850 187 81 1 16 178 3 189 3.36e-50 165
MS.gene017872.t1 MTR_5g010680 44.162 197 75 2 20 181 22 218 3.38e-50 167
MS.gene017872.t1 MTR_1g100777 38.912 239 100 3 16 208 12 250 4.44e-50 166
MS.gene017872.t1 MTR_3g101870 37.553 237 93 4 2 190 9 238 4.82e-48 162
MS.gene017872.t1 MTR_0020s0020 43.216 199 77 2 20 182 31 229 3.26e-44 151
MS.gene017872.t1 MTR_4g088900 46.154 169 83 4 20 181 31 198 2.95e-42 142
MS.gene017872.t1 MTR_5g029680 49.020 153 74 2 19 170 29 178 2.74e-41 147
MS.gene017872.t1 MTR_1g061170 46.541 159 74 2 12 170 39 186 1.02e-39 142
MS.gene017872.t1 MTR_7g095680 56.190 105 42 1 9 113 40 140 5.46e-38 135
MS.gene017872.t1 MTR_3g104550 45.062 162 76 3 9 170 37 185 5.81e-38 136
MS.gene017872.t1 MTR_6g043060 56.989 93 40 0 21 113 21 113 4.60e-37 132
MS.gene017872.t1 MTR_1g102860 52.033 123 56 1 5 127 23 142 6.18e-37 132
MS.gene017872.t1 MTR_1g071360 40.860 186 84 4 20 203 30 191 2.71e-36 130
MS.gene017872.t1 MTR_1g071360 40.323 186 85 3 20 203 27 188 4.00e-36 131
MS.gene017872.t1 MTR_2g100680 53.509 114 49 2 1 113 12 122 7.28e-36 132
MS.gene017872.t1 MTR_8g087540 43.750 144 72 1 13 156 3 137 1.44e-35 130
MS.gene017872.t1 MTR_8g083100 58.242 91 38 0 23 113 23 113 1.80e-33 125
MS.gene017872.t1 MTR_6g086805 39.394 165 75 2 21 172 10 162 1.67e-32 121
MS.gene017872.t1 MTR_2g100670 54.255 94 43 0 20 113 31 124 3.17e-32 119
MS.gene017872.t1 MTR_4g077970 43.333 150 80 2 22 170 12 157 1.36e-31 120
MS.gene017872.t1 MTR_2g100670 54.255 94 43 0 20 113 139 232 2.83e-31 119
MS.gene017872.t1 MTR_2g017890 46.667 105 56 0 22 126 15 119 3.67e-31 118
MS.gene017872.t1 MTR_8g105780 54.255 94 42 1 21 113 21 114 2.89e-30 115
MS.gene017872.t1 MTR_4g045757 50.000 58 29 0 22 79 14 71 4.18e-16 71.2
MS.gene017872.t1 MTR_5g047190 37.634 93 51 2 30 115 1 93 4.80e-15 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene017872.t1 AT2G41690 61.667 180 51 3 20 181 38 217 2.37e-71 218
MS.gene017872.t1 AT5G62020 40.316 253 91 7 20 219 21 266 7.10e-50 165
MS.gene017872.t1 AT1G46264 41.784 213 86 3 11 185 23 235 5.74e-49 164
MS.gene017872.t1 AT4G36990 45.641 195 88 3 12 188 4 198 2.42e-46 155
MS.gene017872.t1 AT4G11660 41.589 214 79 2 20 187 57 270 2.02e-45 155
MS.gene017872.t1 AT1G32330 48.026 152 79 0 19 170 34 185 7.20e-42 148
MS.gene017872.t1 AT1G32330 48.026 152 79 0 19 170 34 185 7.33e-42 148
MS.gene017872.t1 AT4G17750 62.105 95 36 0 20 114 50 144 2.85e-39 142
MS.gene017872.t1 AT5G43840 53.043 115 54 0 12 126 9 123 9.40e-39 135
MS.gene017872.t1 AT3G63350 57.009 107 42 1 6 112 16 118 1.31e-38 135
MS.gene017872.t1 AT2G26150 45.679 162 75 4 9 170 35 183 9.88e-38 135
MS.gene017872.t1 AT2G26150 45.679 162 75 4 9 170 35 183 9.88e-38 135
MS.gene017872.t1 AT3G51910 54.286 105 48 0 12 116 19 123 1.44e-37 132
MS.gene017872.t1 AT5G03720 43.860 171 83 3 22 191 55 213 1.89e-37 135
MS.gene017872.t1 AT5G03720 43.860 171 83 3 22 191 55 213 1.89e-37 135
MS.gene017872.t1 AT3G22830 56.604 106 46 0 12 117 51 156 6.29e-37 134
MS.gene017872.t1 AT3G24520 43.421 152 68 2 21 172 16 149 5.82e-36 130
MS.gene017872.t1 AT3G02990 46.980 149 74 1 22 170 23 166 2.58e-35 130
MS.gene017872.t1 AT5G16820 59.140 93 38 0 22 114 27 119 1.20e-33 126
MS.gene017872.t1 AT5G16820 59.140 93 38 0 22 114 27 119 1.20e-33 126
MS.gene017872.t1 AT4G13980 57.143 91 39 0 23 113 24 114 8.21e-33 124
MS.gene017872.t1 AT5G54070 52.174 92 44 0 21 112 70 161 5.08e-32 119
MS.gene017872.t1 AT5G45710 36.493 211 111 4 15 215 6 203 1.33e-29 113
MS.gene017872.t1 AT5G45710 36.493 211 111 4 15 215 6 203 1.33e-29 113
MS.gene017872.t1 AT1G67970 41.509 159 78 4 21 176 18 164 1.00e-28 111
MS.gene017872.t1 AT4G18880 49.524 105 53 0 22 126 15 119 2.41e-26 105
MS.gene017872.t1 AT4G18870 39.773 88 53 0 22 109 146 233 4.22e-20 87.0
MS.gene017872.t1 AT4G18870 36.842 95 59 1 15 109 6 99 1.19e-16 77.4
MS.gene017872.t1 AT1G77570 34.444 90 56 2 23 109 27 116 2.78e-11 60.1

Find 48 sgRNAs with CRISPR-Local

Find 106 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGGAGAAAGAAGGATTAAA+AGG 0.312750 7.3:-17787271 MS.gene017872:CDS
TTTGATCTTCATCAGAATCT+TGG 0.337536 7.3:+17787519 None:intergenic
ATAAAAGGCCAATGCTGTTT+GGG 0.344706 7.3:-17787313 MS.gene017872:CDS
AAGCTAAAGATGATGATAAA+AGG 0.345414 7.3:-17787328 MS.gene017872:CDS
GTAAAGTTGCAACAAGTAGA+TGG 0.356542 7.3:-17787643 MS.gene017872:CDS
GTGTAAGGAACTACTTGATT+TGG 0.391192 7.3:-17787384 MS.gene017872:CDS
AATGCTGTTTGGGGTGAGAT+TGG 0.405597 7.3:-17787303 MS.gene017872:CDS
GGAGTAGTTATTAGTGAGAA+GGG 0.409709 7.3:-17788928 MS.gene017872:CDS
GATAAAAGGCCAATGCTGTT+TGG 0.412696 7.3:-17787314 MS.gene017872:CDS
TATTAGTGAGAAGGGATTGT+TGG 0.414198 7.3:-17788920 MS.gene017872:CDS
CGATGAAGGAACGGCGTTTG+TGG 0.421292 7.3:-17788806 MS.gene017872:CDS
TCATCAACCTCATCAACTTC+GGG 0.428531 7.3:-17787491 MS.gene017872:CDS
GATATCACACCATCGGTTAT+CGG 0.429226 7.3:+17788835 None:intergenic
GGCGTTTGTGGTGTGGCAGC+CGG 0.436959 7.3:-17788794 MS.gene017872:CDS
AGGAGTAGTTATTAGTGAGA+AGG 0.465195 7.3:-17788929 MS.gene017872:CDS
TGCAATGAAAGATTCAAGAA+AGG 0.469330 7.3:-17787614 MS.gene017872:CDS
GAGAGTTACTATCCGAGATT+CGG 0.475046 7.3:-17787586 MS.gene017872:CDS
TTGCTATGCTTGAAGAGTGT+TGG 0.486048 7.3:+17788748 None:intergenic
ATCATCAACCTCATCAACTT+CGG 0.493338 7.3:-17787492 MS.gene017872:CDS
CTGAGCTAACAAGCATGAAA+AGG 0.494508 7.3:-17787409 MS.gene017872:CDS
AAGCATGAAAAGGAAGTGTA+AGG 0.516645 7.3:-17787399 MS.gene017872:CDS
CATGTATGTCTTCAACAAGA+AGG 0.524524 7.3:+17788870 None:intergenic
GAGCAACAAGCAACAACAAA+CGG 0.533270 7.3:-17787549 MS.gene017872:CDS
ATGTTCAACAAGGAGAAAGA+AGG 0.541421 7.3:-17787280 MS.gene017872:CDS
GTCTTCAACAAGAAGGGTGA+TGG 0.545694 7.3:+17788877 None:intergenic
GCAACTTCTCTAGCTTTGTA+CGG 0.545701 7.3:-17788729 MS.gene017872:CDS
GAGAAGGGATTGTTGGAATG+TGG 0.547926 7.3:-17788913 MS.gene017872:CDS
AATCTCACCCCAAACAGCAT+TGG 0.559832 7.3:+17787305 None:intergenic
CTTGTTGAAGACATACATGT+TGG 0.560125 7.3:-17788866 MS.gene017872:CDS
AGATTCGGAGAAGAAAAGCT+TGG 0.562625 7.3:-17787571 MS.gene017872:CDS
TAACCGATGGTGTGATATCG+TGG 0.574458 7.3:-17788831 MS.gene017872:CDS
TAAAGTTGCAACAAGTAGAT+GGG 0.577262 7.3:-17787642 MS.gene017872:CDS
ATGTATGTCTTCAACAAGAA+GGG 0.585625 7.3:+17788871 None:intergenic
GTTTGTGGTGTGGCAGCCGG+CGG 0.593281 7.3:-17788791 MS.gene017872:CDS
TTCGGGTTACACTAATCTAG+TGG 0.594205 7.3:-17787474 MS.gene017872:CDS
TGAAAACAAGCGACTCAAAG+AGG 0.607328 7.3:-17787450 MS.gene017872:CDS
GTCGAGGATCCGATAACCGA+TGG 0.607491 7.3:-17788844 MS.gene017872:CDS
AGTGTAACCCGAAGTTGATG+AGG 0.609806 7.3:+17787484 None:intergenic
GTGATATCGTGGAACGATGA+AGG 0.614245 7.3:-17788820 MS.gene017872:CDS
ATCGTGGAACGATGAAGGAA+CGG 0.618716 7.3:-17788815 MS.gene017872:CDS
GAAGACATACATGTTGGTCG+AGG 0.623457 7.3:-17788860 MS.gene017872:CDS
AAGGAACGGCGTTTGTGGTG+TGG 0.626326 7.3:-17788801 MS.gene017872:CDS
ATATCACGAGCAAACTCCGC+CGG 0.632816 7.3:+17788775 None:intergenic
GCGACTCAAAGAGGAAAATG+TGG 0.640956 7.3:-17787441 MS.gene017872:CDS
TATGCTTGAAGAGTGTTGGA+AGG 0.652326 7.3:+17788752 None:intergenic
GTGAGATTGGATGTTCAACA+AGG 0.660188 7.3:-17787290 MS.gene017872:CDS
GTTCCACGATATCACACCAT+CGG 0.688849 7.3:+17788828 None:intergenic
TAAAAGGCCAATGCTGTTTG+GGG 0.694963 7.3:-17787312 MS.gene017872:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGTTTATTATTTCAAATTTT+GGG + chr7.3:17787735-17787754 None:intergenic 10.0%
!!! TTTTTATTTTGTAAAGTATT+AGG - chr7.3:17787612-17787631 MS.gene017872:CDS 10.0%
!! AAAATTAAATACCTATTTGT+GGG - chr7.3:17788467-17788486 MS.gene017872:intron 15.0%
!! AATAATAAACAGAGAAAAAA+TGG - chr7.3:17787744-17787763 MS.gene017872:intron 15.0%
!! TAAAATTAAATACCTATTTG+TGG - chr7.3:17788466-17788485 MS.gene017872:intron 15.0%
!! TTCAATTTATACCAAAAAAA+TGG - chr7.3:17788788-17788807 MS.gene017872:CDS 15.0%
!!! AATTCATTGTTTATTTTTGA+AGG - chr7.3:17788111-17788130 MS.gene017872:intron 15.0%
!!! AGTATTTTCAATTAAGATAT+AGG - chr7.3:17787944-17787963 MS.gene017872:intron 15.0%
!!! CTGTTTATTATTTCAAATTT+TGG + chr7.3:17787736-17787755 None:intergenic 15.0%
!!! GTATTTTCAATTAAGATATA+GGG - chr7.3:17787945-17787964 MS.gene017872:intron 15.0%
!!! GTTTATTATTTCAAATTTTG+GGG + chr7.3:17787734-17787753 None:intergenic 15.0%
!!! TTTAGATGTTTTTTTATGAA+AGG + chr7.3:17787557-17787576 None:intergenic 15.0%
!! AAAAGGATAGGTAAAAAAAA+AGG - chr7.3:17787798-17787817 MS.gene017872:intron 20.0%
!! ATATTTGTTTAACCTAGTTT+AGG - chr7.3:17787859-17787878 MS.gene017872:intron 20.0%
!! ATCTAAATATACGATCAATT+TGG + chr7.3:17787667-17787686 None:intergenic 20.0%
!! TTCAAGAAAGAATTCATATT+TGG + chr7.3:17788375-17788394 None:intergenic 20.0%
!!! AAAAAAAAACTAGTTTAGCT+AGG - chr7.3:17787896-17787915 MS.gene017872:intron 20.0%
!!! AGAGAATATTTTATATCTTC+TGG + chr7.3:17787976-17787995 None:intergenic 20.0%
!!! GTAAAGTTTTGTTAAGAAAA+AGG - chr7.3:17787781-17787800 MS.gene017872:intron 20.0%
!!! TGTATTAAAAGCATGTTTTA+TGG + chr7.3:17788352-17788371 None:intergenic 20.0%
! AAGCTAAAGATGATGATAAA+AGG - chr7.3:17788820-17788839 MS.gene017872:CDS 25.0%
! AATATACGATCAATTTGGAA+TGG + chr7.3:17787662-17787681 None:intergenic 25.0%
! AATATAGTTAACCTGTTTCA+TGG + chr7.3:17787844-17787863 None:intergenic 25.0%
! ATAGAAAATTCAATGTTGGT+GGG - chr7.3:17788137-17788156 MS.gene017872:intron 25.0%
! CTCATGTTAATTGACATTAT+GGG - chr7.3:17788027-17788046 MS.gene017872:intron 25.0%
! TCATGTTAATTGACATTATG+GGG - chr7.3:17788028-17788047 MS.gene017872:intron 25.0%
! TCTCATGTTAATTGACATTA+TGG - chr7.3:17788026-17788045 MS.gene017872:intron 25.0%
! TTTGTTAAATGTGAAGGAAT+TGG - chr7.3:17787920-17787939 MS.gene017872:intron 25.0%
!! TTTTCAATTAAGATATAGGG+TGG - chr7.3:17787948-17787967 MS.gene017872:intron 25.0%
!!! GTTTTGTTAAGAAAAAGGAT+AGG - chr7.3:17787786-17787805 MS.gene017872:intron 25.0%
!!! TCATTGTTTATTTTTGAAGG+AGG - chr7.3:17788114-17788133 MS.gene017872:intron 25.0%
AAGGAGAAAGAAGGATTAAA+AGG - chr7.3:17788877-17788896 MS.gene017872:CDS 30.0%
ACAACACTTAATAAGCAACA+TGG - chr7.3:17788295-17788314 MS.gene017872:intron 30.0%
ATGTATGTCTTCAACAAGAA+GGG + chr7.3:17787280-17787299 None:intergenic 30.0%
CATGTTAATTGACATTATGG+GGG - chr7.3:17788029-17788048 MS.gene017872:intron 30.0%
GACTTGTGAGTTTGAATTTA+AGG + chr7.3:17788079-17788098 None:intergenic 30.0%
GAGGATAGAAAATTCAATGT+TGG - chr7.3:17788133-17788152 MS.gene017872:intron 30.0%
GATAGAAAATTCAATGTTGG+TGG - chr7.3:17788136-17788155 MS.gene017872:intron 30.0%
TAAAGTTGCAACAAGTAGAT+GGG - chr7.3:17788506-17788525 MS.gene017872:intron 30.0%
TACCAAAAAAATGGAAGAAG+AGG - chr7.3:17788797-17788816 MS.gene017872:CDS 30.0%
TCAACACAAAAACCTAAACT+AGG + chr7.3:17787874-17787893 None:intergenic 30.0%
TCTTTCATGATGAACTTAAG+TGG - chr7.3:17788414-17788433 MS.gene017872:intron 30.0%
TGCAATGAAAGATTCAAGAA+AGG - chr7.3:17788534-17788553 MS.gene017872:intron 30.0%
TTAGATGTATGTACGTACAT+AGG + chr7.3:17787455-17787474 None:intergenic 30.0%
TTTGATCTTCATCAGAATCT+TGG + chr7.3:17788632-17788651 None:intergenic 30.0%
!!! CTAGGTTTTGTTAAATGTGA+AGG - chr7.3:17787914-17787933 MS.gene017872:intron 30.0%
!!! TTCCTCTTCTTCCATTTTTT+TGG + chr7.3:17788802-17788821 None:intergenic 30.0%
ACCTATTTGTGGGATGTATA+GGG - chr7.3:17788477-17788496 MS.gene017872:intron 35.0%
AGGAGTAGTTATTAGTGAGA+AGG - chr7.3:17787219-17787238 MS.gene017872:CDS 35.0%
ATCATCAACCTCATCAACTT+CGG - chr7.3:17788656-17788675 MS.gene017872:intron 35.0%
ATGTTCAACAAGGAGAAAGA+AGG - chr7.3:17788868-17788887 MS.gene017872:CDS 35.0%
ATTAACATGAGAAACGAGGA+TGG + chr7.3:17788018-17788037 None:intergenic 35.0%
CATGTATGTCTTCAACAAGA+AGG + chr7.3:17787281-17787300 None:intergenic 35.0%
CTTGTTGAAGACATACATGT+TGG - chr7.3:17787282-17787301 MS.gene017872:CDS 35.0%
GGAGTAGTTATTAGTGAGAA+GGG - chr7.3:17787220-17787239 MS.gene017872:CDS 35.0%
GTAAAGTTGCAACAAGTAGA+TGG - chr7.3:17788505-17788524 MS.gene017872:intron 35.0%
GTCAATTAACATGAGAAACG+AGG + chr7.3:17788022-17788041 None:intergenic 35.0%
GTGTAAGGAACTACTTGATT+TGG - chr7.3:17788764-17788783 MS.gene017872:CDS 35.0%
TAATTGACATTATGGGGGTT+TGG - chr7.3:17788034-17788053 MS.gene017872:intron 35.0%
TACCTATTTGTGGGATGTAT+AGG - chr7.3:17788476-17788495 MS.gene017872:intron 35.0%
TATTAGTGAGAAGGGATTGT+TGG - chr7.3:17787228-17787247 MS.gene017872:CDS 35.0%
! AAGCATGAAAAGGAAGTGTA+AGG - chr7.3:17788749-17788768 MS.gene017872:CDS 35.0%
! ATAAAAGGCCAATGCTGTTT+GGG - chr7.3:17788835-17788854 MS.gene017872:CDS 35.0%
! GTTTTATGGTGCCTTACTAA+TGG + chr7.3:17788338-17788357 None:intergenic 35.0%
! TGAGTAAAGCACCATTAGTA+AGG - chr7.3:17788324-17788343 MS.gene017872:intron 35.0%
AGATTCGGAGAAGAAAAGCT+TGG - chr7.3:17788577-17788596 MS.gene017872:intron 40.0%
CTGAGCTAACAAGCATGAAA+AGG - chr7.3:17788739-17788758 MS.gene017872:CDS 40.0%
GAGAGTTACTATCCGAGATT+CGG - chr7.3:17788562-17788581 MS.gene017872:intron 40.0%
GAGCAACAAGCAACAACAAA+CGG - chr7.3:17788599-17788618 MS.gene017872:intron 40.0%
GATAAAAGGCCAATGCTGTT+TGG - chr7.3:17788834-17788853 MS.gene017872:CDS 40.0%
GTGAGATTGGATGTTCAACA+AGG - chr7.3:17788858-17788877 MS.gene017872:CDS 40.0%
TCATCAACCTCATCAACTTC+GGG - chr7.3:17788657-17788676 MS.gene017872:intron 40.0%
TCATGAGTACTCCATGAAAC+AGG - chr7.3:17787830-17787849 MS.gene017872:intron 40.0%
TCCCTATACATCCCACAAAT+AGG + chr7.3:17788481-17788500 None:intergenic 40.0%
TGAAAACAAGCGACTCAAAG+AGG - chr7.3:17788698-17788717 MS.gene017872:intron 40.0%
! AGCTTTTCTTCTCCGAATCT+CGG + chr7.3:17788577-17788596 None:intergenic 40.0%
! GATATCACACCATCGGTTAT+CGG + chr7.3:17787316-17787335 None:intergenic 40.0%
! TAAAAGGCCAATGCTGTTTG+GGG - chr7.3:17788836-17788855 MS.gene017872:CDS 40.0%
! TTCGGGTTACACTAATCTAG+TGG - chr7.3:17788674-17788693 MS.gene017872:intron 40.0%
! TTGCTATGCTTGAAGAGTGT+TGG + chr7.3:17787403-17787422 None:intergenic 40.0%
!! ATTATGGGGGTTTGGTAATG+AGG - chr7.3:17788042-17788061 MS.gene017872:intron 40.0%
!! GCAACTTCTCTAGCTTTGTA+CGG - chr7.3:17787419-17787438 MS.gene017872:CDS 40.0%
!! TATGCTTGAAGAGTGTTGGA+AGG + chr7.3:17787399-17787418 None:intergenic 40.0%
AATCTCACCCCAAACAGCAT+TGG + chr7.3:17788846-17788865 None:intergenic 45.0%
ATCGTGGAACGATGAAGGAA+CGG - chr7.3:17787333-17787352 MS.gene017872:CDS 45.0%
GAAGACATACATGTTGGTCG+AGG - chr7.3:17787288-17787307 MS.gene017872:CDS 45.0%
GAGAAGGGATTGTTGGAATG+TGG - chr7.3:17787235-17787254 MS.gene017872:CDS 45.0%
GCGACTCAAAGAGGAAAATG+TGG - chr7.3:17788707-17788726 MS.gene017872:intron 45.0%
GTCTTCAACAAGAAGGGTGA+TGG + chr7.3:17787274-17787293 None:intergenic 45.0%
GTGATATCGTGGAACGATGA+AGG - chr7.3:17787328-17787347 MS.gene017872:CDS 45.0%
GTTCCACGATATCACACCAT+CGG + chr7.3:17787323-17787342 None:intergenic 45.0%
TAACCGATGGTGTGATATCG+TGG - chr7.3:17787317-17787336 MS.gene017872:CDS 45.0%
TCTCTCCCTATTCAATACCC+CGG - chr7.3:17787991-17788010 MS.gene017872:intron 45.0%
! AATGCTGTTTGGGGTGAGAT+TGG - chr7.3:17788845-17788864 MS.gene017872:CDS 45.0%
!! AGTGTAACCCGAAGTTGATG+AGG + chr7.3:17788667-17788686 None:intergenic 45.0%
!! ATGGTCCGGGGTATTGAATA+GGG + chr7.3:17787999-17788018 None:intergenic 45.0%
ATATCACGAGCAAACTCCGC+CGG + chr7.3:17787376-17787395 None:intergenic 50.0%
ATGAGAAACGAGGATGGTCC+GGG + chr7.3:17788012-17788031 None:intergenic 50.0%
CATGAGAAACGAGGATGGTC+CGG + chr7.3:17788013-17788032 None:intergenic 50.0%
!! GATGGTCCGGGGTATTGAAT+AGG + chr7.3:17788000-17788019 None:intergenic 50.0%
AAGGAACGGCGTTTGTGGTG+TGG - chr7.3:17787347-17787366 MS.gene017872:CDS 55.0%
CGATGAAGGAACGGCGTTTG+TGG - chr7.3:17787342-17787361 MS.gene017872:CDS 55.0%
GTCGAGGATCCGATAACCGA+TGG - chr7.3:17787304-17787323 MS.gene017872:CDS 55.0%
TGAGAAACGAGGATGGTCCG+GGG + chr7.3:17788011-17788030 None:intergenic 55.0%
GGCGTTTGTGGTGTGGCAGC+CGG - chr7.3:17787354-17787373 MS.gene017872:CDS 65.0%
GTTTGTGGTGTGGCAGCCGG+CGG - chr7.3:17787357-17787376 MS.gene017872:CDS 65.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 17787214 17788956 17787214 ID=MS.gene017872
chr7.3 mRNA 17787214 17788956 17787214 ID=MS.gene017872.t1;Parent=MS.gene017872
chr7.3 exon 17788714 17788956 17788714 ID=MS.gene017872.t1.exon1;Parent=MS.gene017872.t1
chr7.3 CDS 17788714 17788956 17788714 ID=cds.MS.gene017872.t1;Parent=MS.gene017872.t1
chr7.3 exon 17787214 17787672 17787214 ID=MS.gene017872.t1.exon2;Parent=MS.gene017872.t1
chr7.3 CDS 17787214 17787672 17787214 ID=cds.MS.gene017872.t1;Parent=MS.gene017872.t1
Gene Sequence

>MS.gene017872

ATGGAAGGAGTAGTTATTAGTGAGAAGGGATTGTTGGAATGTGGAAGAAAGTGCAGTCCATCACCCTTCTTGTTGAAGACATACATGTTGGTCGAGGATCCGATAACCGATGGTGTGATATCGTGGAACGATGAAGGAACGGCGTTTGTGGTGTGGCAGCCGGCGGAGTTTGCTCGTGATATCCTTCCAACACTCTTCAAGCATAGCAACTTCTCTAGCTTTGTACGGCAGCTCAATACCTATGTACGTACATACATCTAAATCTATGTTTTTTTTTTTTATAGATTTTGTTAGACTCACTTGTCTCATTTTTTAGATATTCTCTTTTTGTTCTTTTAGTCCTTTCATAAAAAAACATCTAAAAAATTAACAAAGTAATATTAAATTTAAAGAGAAATTTTTTATTTTGTAAAGTATTAGGTTCTTATTAATGCAAGAAAAATTTCCATTCCAAATTGATCGTATATTTAGATGAAATTTAATGAAAGAATGTGTTACAAGAGTGTGAATATGAATTCCCCAAAATTTGAAATAATAAACAGAGAAAAAATGGATAGTTTTGACTATGTAAAGTTTTGTTAAGAAAAAGGATAGGTAAAAAAAAAGGCATTCGTTTTCATGAGTACTCCATGAAACAGGTTAACTATATTTGTTTAACCTAGTTTAGGTTTTTGTGTTGAAAAAAAAAAAACTAGTTTAGCTAGGTTTTGTTAAATGTGAAGGAATTGGAAGTATTTTCAATTAAGATATAGGGTGGAACCAGAAGATATAAAATATTCTCTCCCTATTCAATACCCCGGACCATCCTCGTTTCTCATGTTAATTGACATTATGGGGGTTTGGTAATGAGGTTAATTTCATACCTTAAATTCAAACTCACAAGTCAAGCACGTAGAAAATTCATTGTTTATTTTTGAAGGAGGATAGAAAATTCAATGTTGGTGGGCGATATGACTTACATTAATTAGTTTTATTTATTCATAATAAGCAGCTCTCAAAAAAAAATATTTATAATAAGCAACAAAATTTTATCAAAAATATTTATAATAAGCAACAAAATTTTATCAATATTGAACAATTAACAACACTTAATAAGCAACATGGTGTCTTTGAGTAAAGCACCATTAGTAAGGCACCATAAAACATGCTTTTAATACACCAAATATGAATTCTTTCTTGAAAAAATGCTAATGTTTTTGTTCTTTCATGATGAACTTAAGTGGCAGTTGTTTTTATAATTTATTCATTACTGTAAAATTAAATACCTATTTGTGGGATGTATAGGGATTTCGTAAAGTTGCAACAAGTAGATGGGAGTTTTGCAATGAAAGATTCAAGAAAGGTGAAAGAGAGTTACTATCCGAGATTCGGAGAAGAAAAGCTTGGAGCAACAAGCAACAACAAACGGTACAAAACCAAGATTCTGATGAAGATCAAAGATCATCATCAACCTCATCAACTTCGGGTTACACTAATCTAGTGGATGAAAACAAGCGACTCAAAGAGGAAAATGTGGTGTTGAATTCTGAGCTAACAAGCATGAAAAGGAAGTGTAAGGAACTACTTGATTTGGTTTCAATTTATACCAAAAAAATGGAAGAAGAGGAAGCTAAAGATGATGATAAAAGGCCAATGCTGTTTGGGGTGAGATTGGATGTTCAACAAGGAGAAAGAAGGATTAAAAGGACTAGAGCTGAGATTAGTGAAAACGCAAGCATTTTGTTGTCTCAATCATGCAAATAG
Protein sequence

>MS.gene017872.t1

MEGVVISEKGLLECGRKCSPSPFLLKTYMLVEDPITDGVISWNDEGTAFVVWQPAEFARDILPTLFKHSNFSSFVRQLNTYGFRKVATSRWEFCNERFKKGERELLSEIRRRKAWSNKQQQTVQNQDSDEDQRSSSTSSTSGYTNLVDENKRLKEENVVLNSELTSMKRKCKELLDLVSIYTKKMEEEEAKDDDKRPMLFGVRLDVQQGERRIKRTRAEISENASILLSQSCK