AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene017921

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene017921.t1 MTR_7g092070 97.956 734 15 0 1 734 1 734 0.0 1485
MS.gene017921.t1 MTR_3g029590 64.345 718 220 15 33 731 31 731 0.0 849
MS.gene017921.t1 MTR_1g050438 53.808 604 255 12 33 630 1 586 0.0 568
MS.gene017921.t1 MTR_0728s0020 53.400 603 259 10 33 630 17 602 0.0 568
MS.gene017921.t1 MTR_5g082830 42.647 748 297 24 34 731 18 683 2.60e-163 487
MS.gene017921.t1 MTR_5g071070 41.691 686 302 14 39 678 27 660 3.62e-152 459
MS.gene017921.t1 MTR_3g435590 57.107 394 145 6 33 422 18 391 5.18e-145 432
MS.gene017921.t1 MTR_3g435590 60.377 53 21 0 623 675 416 468 2.86e-12 70.1
MS.gene017921.t1 MTR_1g075890 41.420 676 299 19 44 680 30 647 1.15e-141 431
MS.gene017921.t1 MTR_5g071070 40.952 630 274 14 95 678 1 578 4.14e-133 407
MS.gene017921.t1 MTR_3g435680 50.124 403 143 10 95 495 5 351 3.14e-110 340
MS.gene017921.t1 MTR_3g070880 39.912 456 161 11 45 490 8 360 1.39e-95 306
MS.gene017921.t1 MTR_3g464260 39.615 467 195 9 50 516 28 407 1.94e-94 303
MS.gene017921.t1 MTR_3g464280 33.943 601 245 16 62 661 32 481 6.08e-82 270
MS.gene017921.t1 MTR_6g090380 75.701 107 26 0 260 366 99 205 2.82e-57 199
MS.gene017921.t1 MTR_8g102100 57.229 166 57 2 260 417 77 236 3.69e-56 197
MS.gene017921.t1 MTR_2g090605 69.369 111 34 0 264 374 77 187 1.53e-53 191
MS.gene017921.t1 MTR_3g464270 33.971 418 202 11 263 675 8 356 6.68e-53 187
MS.gene017921.t1 MTR_3g103960 61.029 136 49 2 254 388 43 175 1.63e-52 183
MS.gene017921.t1 MTR_4g078660 66.355 107 36 0 260 366 56 162 1.94e-50 179
MS.gene017921.t1 MTR_3g464290 32.397 463 195 15 243 677 79 451 5.33e-46 171
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene017921.t1 AT2G41900 65.703 761 189 22 1 734 1 716 0.0 880
MS.gene017921.t1 AT5G12850 53.748 707 270 19 41 727 36 705 0.0 684
MS.gene017921.t1 AT5G58620 44.511 665 258 17 44 683 11 589 2.03e-161 480
MS.gene017921.t1 AT2G40140 40.170 707 258 20 43 728 29 591 3.22e-142 430
MS.gene017921.t1 AT2G40140 40.170 707 258 20 43 728 29 591 3.22e-142 430
MS.gene017921.t1 AT3G55980 47.586 435 156 9 41 461 24 400 4.84e-123 380
MS.gene017921.t1 AT3G55980 47.586 435 156 9 41 461 91 467 6.28e-122 379
MS.gene017921.t1 AT4G29190 51.389 216 93 4 220 428 36 246 1.12e-58 203
MS.gene017921.t1 AT2G19810 56.604 159 68 1 210 368 25 182 9.25e-57 197
MS.gene017921.t1 AT2G25900 72.477 109 30 0 260 368 86 194 1.02e-56 196
MS.gene017921.t1 AT2G25900 72.477 109 30 0 260 368 86 194 1.02e-56 196
MS.gene017921.t1 AT5G07500 64.463 121 43 0 246 366 34 154 9.62e-55 188
MS.gene017921.t1 AT1G03790 59.859 142 49 3 242 379 64 201 7.81e-52 185
MS.gene017921.t1 AT5G44260 60.156 128 46 2 242 368 42 165 8.83e-49 176

Find 204 sgRNAs with CRISPR-Local

Find 220 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAATAATTCTTGGTCAAAA+TGG 0.154209 7.1:-15186965 MS.gene017921:CDS
CTAGTGCTGGCTGTAATCTT+AGG 0.193223 7.1:-15188270 MS.gene017921:CDS
TTATTGCAGGCGGCTTCTTA+TGG 0.247506 7.1:-15187149 MS.gene017921:CDS
CCGTTAGCATCCACGGAATT+AGG 0.259510 7.1:+15188379 None:intergenic
GAAAGTGATTATTTCTTTAT+CGG 0.262167 7.1:-15188521 MS.gene017921:CDS
GTGAAGCTGCTTCTTGCAGC+AGG 0.273866 7.1:-15188409 MS.gene017921:CDS
AACTGAGATCAAAGAGAAAT+TGG 0.283003 7.1:-15186802 MS.gene017921:CDS
TTCTTATTCTCCTCCTTTGT+CGG 0.292786 7.1:-15188227 MS.gene017921:CDS
CGCGTGCTTATTCCCATGAT+TGG 0.294935 7.1:-15188012 MS.gene017921:CDS
AAAACAGTTGAAGTCAGATT+TGG 0.296997 7.1:+15187275 None:intergenic
ACTTTCTCGGGTCCCTTCTT+CGG 0.297219 7.1:+15187954 None:intergenic
CTTTCTCGGGTCCCTTCTTC+GGG 0.310844 7.1:+15187955 None:intergenic
TACAATGGCCGAAGCTCTTC+AGG 0.319804 7.1:+15187755 None:intergenic
ATCCCAGCCTTGCATCTTCC+TGG 0.322304 7.1:-15187539 MS.gene017921:CDS
AACTCCATGCTTGCAGCTGC+TGG 0.324417 7.1:-15186993 MS.gene017921:CDS
ATCTCAGGTGCTGCGCCAGC+TGG 0.340015 7.1:-15186771 MS.gene017921:CDS
CGGTGGATGAGGTTGGATTA+TGG 0.349552 7.1:-15188633 MS.gene017921:CDS
GCAGCCATGAGCATGTTGCC+TGG 0.353518 7.1:-15187668 MS.gene017921:CDS
TGCTGCGCCAGCTGGTTCCT+CGG 0.353578 7.1:-15186763 MS.gene017921:CDS
CTTCTTCGGGCATTCTCCCC+TGG 0.358679 7.1:+15187968 None:intergenic
CTGGCTCAGTCAATAATTCT+TGG 0.360024 7.1:-15186974 MS.gene017921:CDS
ACAGGCATGCCAACTCATTA+AGG 0.364336 7.1:+15187414 None:intergenic
CGGCCATTGTATGTTTCAAC+TGG 0.366588 7.1:-15187743 MS.gene017921:CDS
AAGAGATCATCAAGATTTGA+TGG 0.375352 7.1:+15187332 None:intergenic
CAATTGACTTCAACTTCAAC+AGG 0.377422 7.1:+15188164 None:intergenic
GTAAGGGTGCTTGCCGGCGC+GGG 0.377691 7.1:-15187898 MS.gene017921:CDS
TCAAGATTTGATGGATTCAA+TGG 0.378043 7.1:+15187341 None:intergenic
CTTGAGCCCATTGGAGAGAT+AGG 0.383762 7.1:+15187086 None:intergenic
TTGTTGCTGTTGATCATAAT+CGG 0.386100 7.1:+15187439 None:intergenic
ATTCCGAATGTATTCTTTCA+AGG 0.389840 7.1:-15188047 MS.gene017921:CDS
CTAGACTGAAGATTACTTCC+AGG 0.391284 7.1:+15187521 None:intergenic
GCTCTTCACTGTGCTGCTTC+CGG 0.395253 7.1:-15188457 MS.gene017921:CDS
GAACTCCCTCTTTCTCCTGC+TGG 0.397305 7.1:-15188142 MS.gene017921:CDS
TATCGGATGTTGATATCAAC+AGG 0.399105 7.1:-15188504 MS.gene017921:CDS
AGATGCAAGGCTGGGATGTT+TGG 0.402195 7.1:+15187545 None:intergenic
CTAATTCCGTGGATGCTAAC+GGG 0.402744 7.1:-15188378 MS.gene017921:CDS
TTCTCCCCTGGATGAACAAA+AGG 0.403658 7.1:+15187980 None:intergenic
GATCATCTTCATTTGAGCTT+GGG 0.407859 7.1:-15186881 MS.gene017921:CDS
ACCGATAGTTAAGTGATTCA+TGG 0.410974 7.1:+15188744 None:intergenic
CCCCATTGGTAAGTTGGATT+GGG 0.412004 7.1:-15186937 MS.gene017921:CDS
TGTTGATCATCATTTATTGC+AGG 0.414822 7.1:-15187162 MS.gene017921:CDS
GCCAGCTGGTTCCTCGGGTG+AGG 0.415311 7.1:-15186757 MS.gene017921:CDS
TGTCGGCTTCACCTGAGAAC+GGG 0.415939 7.1:-15188210 MS.gene017921:CDS
TGAAGCTGCTTCTTGCAGCA+GGG 0.417923 7.1:-15188408 MS.gene017921:CDS
TGATTCATGGTGTGGTTTCT+CGG 0.418912 7.1:+15188757 None:intergenic
TTTCACACAACTCTGTTGCT+TGG 0.421951 7.1:-15187574 MS.gene017921:CDS
CAATAATTCTTGGTCAAAAT+GGG 0.422094 7.1:-15186964 MS.gene017921:CDS
GTCTGTTGATCATGCTGTAT+TGG 0.422918 7.1:-15186709 MS.gene017921:CDS
TCTGTTGATCATGCTGTATT+GGG 0.426592 7.1:-15186708 MS.gene017921:CDS
TCTTATGGTGTTCAGCCATC+AGG 0.430030 7.1:-15187134 MS.gene017921:CDS
AAGGGCATTCAGTCCAATCA+TGG 0.433719 7.1:+15187999 None:intergenic
CAGCTGTAGTGATACTTTCT+CGG 0.440024 7.1:+15187941 None:intergenic
GCTGCGCCAGCTGGTTCCTC+GGG 0.442943 7.1:-15186762 MS.gene017921:CDS
GACTGCACCCATGATAAATC+AGG 0.445095 7.1:+15186843 None:intergenic
AATTTCTCTTTGATCTCAGT+TGG 0.445539 7.1:+15186804 None:intergenic
CGTGGAGACATTCTTCCTGA+TGG 0.449642 7.1:+15187119 None:intergenic
ACTCCACCCATGTCACCTTC+TGG 0.450662 7.1:-15187605 MS.gene017921:CDS
TTCACTGTGCTGCTTCCGGT+GGG 0.454176 7.1:-15188453 MS.gene017921:CDS
GGCAAAGAAGCAAACTCTCC+TGG 0.456158 7.1:+15187784 None:intergenic
CTTCCAGGAAGATGCAAGGC+TGG 0.462334 7.1:+15187536 None:intergenic
TGAGCAAAGGACGCCGTTGA+TGG 0.464569 7.1:-15188575 MS.gene017921:CDS
GCCCAATCCAACTTACCAAT+GGG 0.465076 7.1:+15186936 None:intergenic
TCAGGAAGGGATGGATCAAC+AGG 0.466570 7.1:+15188100 None:intergenic
CAAGCACCCTTACGAAAATC+AGG 0.467829 7.1:+15187908 None:intergenic
GACATCGAAGAAGGTGAGCC+AGG 0.468116 7.1:+15187650 None:intergenic
AGATCATCTTCATTTGAGCT+TGG 0.468995 7.1:-15186882 MS.gene017921:CDS
TAGTGCTGGCTGTAATCTTA+GGG 0.470828 7.1:-15188269 MS.gene017921:CDS
TTCAACTTCAACAGGAGATC+CGG 0.470845 7.1:+15188172 None:intergenic
AATTAATATGACGTGGAGAC+AGG 0.471650 7.1:+15187396 None:intergenic
TTGTCGGCTTCACCTGAGAA+CGG 0.475746 7.1:-15188211 MS.gene017921:CDS
AGGACGGTACAAATTGTTCC+AGG 0.478546 7.1:-15187802 MS.gene017921:CDS
AATGAATATGAGCACACAAA+TGG 0.478801 7.1:-15186733 MS.gene017921:CDS
GCGAGGAGCCTGATTTATCA+TGG 0.480265 7.1:-15186851 MS.gene017921:CDS
AGGAGATCCGGTGGTGGAGA+AGG 0.485489 7.1:+15188184 None:intergenic
GGAGAAGGAGACCCGTTCTC+AGG 0.488091 7.1:+15188199 None:intergenic
CTTCACTGTGCTGCTTCCGG+TGG 0.492217 7.1:-15188454 MS.gene017921:CDS
GGTGACATGGGTGGAGTGAA+TGG 0.492460 7.1:+15187611 None:intergenic
GTCAAGCACGTCTTCTGCCA+TGG 0.494988 7.1:-15187699 MS.gene017921:CDS
AAATTGGCAACTTCCATCTC+AGG 0.496278 7.1:-15186786 MS.gene017921:CDS
TGAGCCAGCAGCTGCAAGCA+TGG 0.498255 7.1:+15186989 None:intergenic
CCAGCTGGTTCCTCGGGTGA+GGG 0.498286 7.1:-15186756 MS.gene017921:CDS
AGCTGGCGCAGCACCTGAGA+TGG 0.500158 7.1:+15186773 None:intergenic
CAAATTGACGGTCCTAGTGC+TGG 0.503235 7.1:-15188283 MS.gene017921:CDS
CAATGCTAGAGATATTCATA+TGG 0.504807 7.1:-15187480 MS.gene017921:CDS
CCCACACTCCTGAAGAGCTT+CGG 0.505759 7.1:-15187763 MS.gene017921:CDS
CCAACCTCATCCACCGATGT+AGG 0.509535 7.1:+15188640 None:intergenic
TTGATGGTTGCTGCTACATA+TGG 0.511142 7.1:-15188559 MS.gene017921:CDS
TGTACCGTCCTTGCAGAGAC+GGG 0.511148 7.1:+15187814 None:intergenic
CAGGGGAGAATGCCCGAAGA+AGG 0.515191 7.1:-15187967 MS.gene017921:CDS
GTGGAACCTATCTCTCCAAT+GGG 0.516161 7.1:-15187092 MS.gene017921:CDS
TCAGATCCAGCAGGAGAAAG+AGG 0.517866 7.1:+15188136 None:intergenic
AGCTGTAGTGATACTTTCTC+GGG 0.519357 7.1:+15187942 None:intergenic
TGAGAATTGTGTGTCGAAGT+TGG 0.520178 7.1:+15188781 None:intergenic
GGACCTTGAAAGAATACATT+CGG 0.520381 7.1:+15188044 None:intergenic
CCCTCACCCGAGGAACCAGC+TGG 0.525483 7.1:+15186756 None:intergenic
GAGATAGGTTCCACGTTTCG+TGG 0.525659 7.1:+15187101 None:intergenic
TCTTTCTTCTCAGATCCAGC+AGG 0.526498 7.1:+15188127 None:intergenic
GACATGTGTGAATATGCTCA+TGG 0.527602 7.1:-15187875 MS.gene017921:CDS
CGTAAGGGTGCTTGCCGGCG+CGG 0.530669 7.1:-15187899 MS.gene017921:CDS
CTATCTCTCCAATGGGCTCA+AGG 0.530752 7.1:-15187085 MS.gene017921:CDS
ATTGACATCCTTGAGCCCAT+TGG 0.533162 7.1:+15187077 None:intergenic
CGGGTCTCCTTCTCCACCAC+CGG 0.535005 7.1:-15188191 MS.gene017921:CDS
TGATCCTACATCGGTGGATG+AGG 0.535909 7.1:-15188644 MS.gene017921:CDS
GAAGCTGCTTCTTGCAGCAG+GGG 0.537195 7.1:-15188407 MS.gene017921:CDS
CCTACATCGGTGGATGAGGT+TGG 0.537476 7.1:-15188640 MS.gene017921:CDS
AAGACAGCTGATTTGTGAGT+CGG 0.538872 7.1:+15187248 None:intergenic
CCTAATTCCGTGGATGCTAA+CGG 0.540668 7.1:-15188379 MS.gene017921:CDS
GAGGAGCTACTTCAAATTGA+CGG 0.543363 7.1:-15188295 MS.gene017921:CDS
CTAAGATTACAGCCAGCACT+AGG 0.544045 7.1:+15188271 None:intergenic
TCATTTGAGCTTGGGAACAA+TGG 0.545835 7.1:-15186873 MS.gene017921:CDS
CGTGGAACCTATCTCTCCAA+TGG 0.547113 7.1:-15187093 MS.gene017921:CDS
GGGCTCAAGGATGTCAATGC+TGG 0.547672 7.1:-15187072 MS.gene017921:CDS
GCCGAAGCTCTTCAGGAGTG+TGG 0.548910 7.1:+15187762 None:intergenic
TAGTTAAGTGATTCATGGTG+TGG 0.551522 7.1:+15188749 None:intergenic
AGACGGGTTCTATATTGTGC+AGG 0.553860 7.1:+15187830 None:intergenic
AGCCCAATCCAACTTACCAA+TGG 0.555691 7.1:+15186935 None:intergenic
GATGAGGTTGGATTATGGTA+TGG 0.556471 7.1:-15188628 MS.gene017921:CDS
ATTCAATGGCTTCATTCGAC+CGG 0.556611 7.1:+15187355 None:intergenic
ACCATGAATCACTTAACTAT+CGG 0.558236 7.1:-15188745 MS.gene017921:CDS
CCCATGTCACCTTCTGGCAA+TGG 0.558647 7.1:-15187599 MS.gene017921:CDS
TGGGAATAAGCACGCGAACA+AGG 0.559628 7.1:+15188019 None:intergenic
ACATGTGTGAATATGCTCAT+GGG 0.562526 7.1:-15187874 MS.gene017921:CDS
TTCCAGGAAGATGCAAGGCT+GGG 0.563396 7.1:+15187537 None:intergenic
TAAGGGTGCTTGCCGGCGCG+GGG 0.564739 7.1:-15187897 MS.gene017921:CDS
TTGTACCGTCCTTGCAGAGA+CGG 0.564971 7.1:+15187813 None:intergenic
AGCCTAAGCTTCCGCGAGCA+CGG 0.565872 7.1:-15187020 MS.gene017921:CDS
AGCCGTGCTCGCGGAAGCTT+AGG 0.568886 7.1:+15187018 None:intergenic
GACATGACAGACATCGAAGA+AGG 0.569249 7.1:+15187641 None:intergenic
AGGGGAGAATGCCCGAAGAA+GGG 0.570703 7.1:-15187966 MS.gene017921:CDS
GAATAAACAATAACATCTAA+CGG 0.574687 7.1:+15188349 None:intergenic
CATGGCTGCAGCAAAATCCA+TGG 0.577281 7.1:+15187682 None:intergenic
CCCTTACGAAAATCAGGACA+AGG 0.579234 7.1:+15187914 None:intergenic
CTGCTAATAACGACGTGGAA+GGG 0.580572 7.1:-15188687 MS.gene017921:CDS
CAGATCCAGCAGGAGAAAGA+GGG 0.581890 7.1:+15188137 None:intergenic
ACGATCCCCGTTAGCATCCA+CGG 0.582142 7.1:+15188372 None:intergenic
GTATGTTTCAACTGGTTCTG+CGG 0.583036 7.1:-15187735 MS.gene017921:CDS
AGGGCATTCAGTCCAATCAT+GGG 0.584059 7.1:+15188000 None:intergenic
TGAGCCAGGCAACATGCTCA+TGG 0.584222 7.1:+15187664 None:intergenic
GACGTGCTTGACCGAGGTGA+GGG 0.585321 7.1:+15187710 None:intergenic
TTCAACAGGAGATCCGGTGG+TGG 0.585729 7.1:+15188178 None:intergenic
CCGAAGCTCTTCAGGAGTGT+GGG 0.587103 7.1:+15187763 None:intergenic
GCAACAACTCCTTAATGAGT+TGG 0.589263 7.1:-15187423 MS.gene017921:CDS
TCTCCCCTGGATGAACAAAA+GGG 0.590156 7.1:+15187981 None:intergenic
GAAGAGCAGTGCTCTTGTCA+AGG 0.590240 7.1:+15188473 None:intergenic
TTATGGTATGGTCGTCGCAA+GGG 0.590907 7.1:-15188616 MS.gene017921:CDS
GTTCTGCGGTTCCCTCACCT+CGG 0.594015 7.1:-15187721 MS.gene017921:CDS
CGAGGAGCCTGATTTATCAT+GGG 0.594503 7.1:-15186850 MS.gene017921:CDS
ATTATGGTATGGTCGTCGCA+AGG 0.597308 7.1:-15188617 MS.gene017921:CDS
GTGCTCTTGTCAAGGCCACA+AGG 0.598467 7.1:+15188481 None:intergenic
TATTAGCAGCAAGCTCAAGA+AGG 0.599518 7.1:+15188701 None:intergenic
ATCATGCTGTATTGGGAACA+TGG 0.599645 7.1:-15186701 MS.gene017921:CDS
AGACGTGCTTGACCGAGGTG+AGG 0.601319 7.1:+15187709 None:intergenic
GCTCAAATGAAGATGATCTA+CGG 0.601438 7.1:+15186886 None:intergenic
GACGGAGATGAAGACGGCAC+AGG 0.602727 7.1:+15188811 None:intergenic
GCTGCTAATAACGACGTGGA+AGG 0.603136 7.1:-15188688 MS.gene017921:CDS
TTCTCAGGTGAAGCCGACAA+AGG 0.603590 7.1:+15188214 None:intergenic
AAGAATGTCTCCACGAAACG+TGG 0.605224 7.1:-15187111 MS.gene017921:CDS
TCTAACAGTCTTAGCCGCTC+CGG 0.606773 7.1:-15187374 MS.gene017921:CDS
GCCATTGCCAGAAGGTGACA+TGG 0.611555 7.1:+15187598 None:intergenic
CTGTTAGAATTAATATGACG+TGG 0.612704 7.1:+15187389 None:intergenic
ATATAGAACCCGTCTCTGCA+AGG 0.614108 7.1:-15187822 MS.gene017921:CDS
ATTCACACATGTCCCCGCGC+CGG 0.614297 7.1:+15187885 None:intergenic
TGATCATCATTTATTGCAGG+CGG 0.614691 7.1:-15187159 MS.gene017921:CDS
TATGTAGCAGCAACCATCAA+CGG 0.614726 7.1:+15188562 None:intergenic
GTTGATATCAACAGGCCTTG+TGG 0.614945 7.1:-15188496 MS.gene017921:CDS
TGGAGTTAGAGCCGTGCTCG+CGG 0.616438 7.1:+15187009 None:intergenic
AGCAGATGGTCAATGAGCAA+AGG 0.617799 7.1:-15188588 MS.gene017921:CDS
ATATCGAGGAGAAGAACTCT+CGG 0.618533 7.1:+15187304 None:intergenic
AATAAGCACGCGAACAAGGT+CGG 0.619335 7.1:+15188023 None:intergenic
AAGGCTGGGATGTTTGGCTG+AGG 0.620227 7.1:+15187551 None:intergenic
TAATTCCGTGGATGCTAACG+GGG 0.620451 7.1:-15188377 MS.gene017921:CDS
GCTCACAATGCGGATGATGT+TGG 0.621854 7.1:-15186915 MS.gene017921:CDS
TCACTGTGCTGCTTCCGGTG+GGG 0.621976 7.1:-15188452 MS.gene017921:CDS
ATGGGTGGAGTGAATGGTGA+AGG 0.622440 7.1:+15187617 None:intergenic
GATGCAGCTTGATCATCTTG+TGG 0.622855 7.1:-15186670 MS.gene017921:CDS
TTGCCAGAAGGTGACATGGG+TGG 0.627061 7.1:+15187602 None:intergenic
TCAGGTGAAGCCGACAAAGG+AGG 0.632119 7.1:+15188217 None:intergenic
GATAGAGACGGAGATGAAGA+CGG 0.638842 7.1:+15188805 None:intergenic
TCGCAAGGGATCGAAGCAGA+TGG 0.641118 7.1:-15188602 MS.gene017921:CDS
CCAATCCAACTTACCAATGG+GGG 0.641577 7.1:+15186938 None:intergenic
AGAACCCGTCTCTGCAAGGA+CGG 0.642420 7.1:-15187818 MS.gene017921:CDS
TGAAAGGATGTGCTGTGAGT+CGG 0.642861 7.1:-15188845 None:intergenic
AACTTCAACAGGAGATCCGG+TGG 0.644927 7.1:+15188175 None:intergenic
GTCGAAGTTGGAGATAGAGA+CGG 0.650421 7.1:+15188793 None:intergenic
CATGTGTGAATATGCTCATG+GGG 0.652271 7.1:-15187873 MS.gene017921:CDS
GCAGAAGACGTGCTTGACCG+AGG 0.653400 7.1:+15187704 None:intergenic
TTTCACAAGTTCAAGCTTCG+GGG 0.656993 7.1:+15188327 None:intergenic
TGAGCTTGGGAACAATGGCG+AGG 0.658801 7.1:-15186868 MS.gene017921:CDS
TGTGAAATGCCATTGCCAGA+AGG 0.659354 7.1:+15187590 None:intergenic
ATTACTTCCAGGAAGATGCA+AGG 0.661108 7.1:+15187532 None:intergenic
AAGGATGTGCTGTGAGTCGG+AGG 0.661354 7.1:-15188842 None:intergenic
AGGGGCTGATCCTAATTCCG+TGG 0.663243 7.1:-15188389 MS.gene017921:CDS
ATGGCTTCATTCGACCGGAG+CGG 0.667016 7.1:+15187360 None:intergenic
CATATTCATTCCCTCACCCG+AGG 0.676171 7.1:+15186746 None:intergenic
CCCAATCCAACTTACCAATG+GGG 0.681631 7.1:+15186937 None:intergenic
GAACCAGTTGAAACATACAA+TGG 0.685763 7.1:+15187740 None:intergenic
TGAGTATGATCCTACATCGG+TGG 0.686854 7.1:-15188650 MS.gene017921:CDS
AGATTTGGATCAGCATATCG+AGG 0.694701 7.1:+15187290 None:intergenic
GTTGGATTGGGCTCACAATG+CGG 0.696691 7.1:-15186925 MS.gene017921:CDS
GATTGAGTATGATCCTACAT+CGG 0.700321 7.1:-15188653 MS.gene017921:CDS
CCATTGCCAGAAGGTGACAT+GGG 0.719317 7.1:+15187599 None:intergenic
CCTTACGAAAATCAGGACAA+GGG 0.730105 7.1:+15187915 None:intergenic
GCTTGCTGCTAATAACGACG+TGG 0.738667 7.1:-15188692 MS.gene017921:CDS
AGGATGTGCTGTGAGTCGGA+GGG 0.739091 7.1:-15188841 MS.gene017921:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAATAAACAATAACATCTAA+CGG + chr7.1:15187148-15187167 None:intergenic 20.0%
!!! GAAAGTGATTATTTCTTTAT+CGG - chr7.1:15186973-15186992 MS.gene017921:CDS 20.0%
! CAATAATTCTTGGTCAAAAT+GGG - chr7.1:15188530-15188549 MS.gene017921:CDS 25.0%
! GAAGAAAAATTTGTATTCAC+TGG + chr7.1:15188306-15188325 None:intergenic 25.0%
! TCAATAATTCTTGGTCAAAA+TGG - chr7.1:15188529-15188548 MS.gene017921:CDS 25.0%
AAAACAGTTGAAGTCAGATT+TGG + chr7.1:15188222-15188241 None:intergenic 30.0%
AACTGAGATCAAAGAGAAAT+TGG - chr7.1:15188692-15188711 MS.gene017921:CDS 30.0%
AAGAGATCATCAAGATTTGA+TGG + chr7.1:15188165-15188184 None:intergenic 30.0%
AATGAATATGAGCACACAAA+TGG - chr7.1:15188761-15188780 MS.gene017921:CDS 30.0%
AATTTCTCTTTGATCTCAGT+TGG + chr7.1:15188693-15188712 None:intergenic 30.0%
ACCATGAATCACTTAACTAT+CGG - chr7.1:15186749-15186768 MS.gene017921:CDS 30.0%
ATTCCGAATGTATTCTTTCA+AGG - chr7.1:15187447-15187466 MS.gene017921:CDS 30.0%
CAATGCTAGAGATATTCATA+TGG - chr7.1:15188014-15188033 MS.gene017921:CDS 30.0%
CTGTTAGAATTAATATGACG+TGG + chr7.1:15188108-15188127 None:intergenic 30.0%
TGTTGATCATCATTTATTGC+AGG - chr7.1:15188332-15188351 MS.gene017921:CDS 30.0%
! TTGTTGCTGTTGATCATAAT+CGG + chr7.1:15188058-15188077 None:intergenic 30.0%
! TTTTTCACAAGTTCAAGCTT+CGG + chr7.1:15187172-15187191 None:intergenic 30.0%
!! TCAAGATTTGATGGATTCAA+TGG + chr7.1:15188156-15188175 None:intergenic 30.0%
!!! TATATGCTGTTTTTGATGTC+AGG + chr7.1:15187415-15187434 None:intergenic 30.0%
AATTAATATGACGTGGAGAC+AGG + chr7.1:15188101-15188120 None:intergenic 35.0%
ACATGTGTGAATATGCTCAT+GGG - chr7.1:15187620-15187639 MS.gene017921:CDS 35.0%
ACCGATAGTTAAGTGATTCA+TGG + chr7.1:15186753-15186772 None:intergenic 35.0%
ACTTGTGAAAAACAGTCTTG+AGG - chr7.1:15187180-15187199 MS.gene017921:CDS 35.0%
AGATCATCTTCATTTGAGCT+TGG - chr7.1:15188612-15188631 MS.gene017921:CDS 35.0%
GAACCAGTTGAAACATACAA+TGG + chr7.1:15187757-15187776 None:intergenic 35.0%
GATCATCTTCATTTGAGCTT+GGG - chr7.1:15188613-15188632 MS.gene017921:CDS 35.0%
GATTGAGTATGATCCTACAT+CGG - chr7.1:15186841-15186860 MS.gene017921:CDS 35.0%
GCTCAAATGAAGATGATCTA+CGG + chr7.1:15188611-15188630 None:intergenic 35.0%
GGACCTTGAAAGAATACATT+CGG + chr7.1:15187453-15187472 None:intergenic 35.0%
TAGTTAAGTGATTCATGGTG+TGG + chr7.1:15186748-15186767 None:intergenic 35.0%
TATCGGATGTTGATATCAAC+AGG - chr7.1:15186990-15187009 MS.gene017921:CDS 35.0%
TCTGTTGATCATGCTGTATT+GGG - chr7.1:15188786-15188805 MS.gene017921:CDS 35.0%
TGATCATCATTTATTGCAGG+CGG - chr7.1:15188335-15188354 MS.gene017921:CDS 35.0%
TTCTTATTCTCCTCCTTTGT+CGG - chr7.1:15187267-15187286 MS.gene017921:CDS 35.0%
! CAATTGACTTCAACTTCAAC+AGG + chr7.1:15187333-15187352 None:intergenic 35.0%
! TTTTCACAAGTTCAAGCTTC+GGG + chr7.1:15187171-15187190 None:intergenic 35.0%
AAATTGGCAACTTCCATCTC+AGG - chr7.1:15188708-15188727 MS.gene017921:CDS 40.0%
AGATTTGGATCAGCATATCG+AGG + chr7.1:15188207-15188226 None:intergenic 40.0%
AGCTGTAGTGATACTTTCTC+GGG + chr7.1:15187555-15187574 None:intergenic 40.0%
ATATCGAGGAGAAGAACTCT+CGG + chr7.1:15188193-15188212 None:intergenic 40.0%
ATCATGCTGTATTGGGAACA+TGG - chr7.1:15188793-15188812 MS.gene017921:CDS 40.0%
ATTACTTCCAGGAAGATGCA+AGG + chr7.1:15187965-15187984 None:intergenic 40.0%
ATTCAATGGCTTCATTCGAC+CGG + chr7.1:15188142-15188161 None:intergenic 40.0%
CAGCTGTAGTGATACTTTCT+CGG + chr7.1:15187556-15187575 None:intergenic 40.0%
CATGTGTGAATATGCTCATG+GGG - chr7.1:15187621-15187640 MS.gene017921:CDS 40.0%
CCTTACGAAAATCAGGACAA+GGG + chr7.1:15187582-15187601 None:intergenic 40.0%
CTAGACTGAAGATTACTTCC+AGG + chr7.1:15187976-15187995 None:intergenic 40.0%
CTGGCTCAGTCAATAATTCT+TGG - chr7.1:15188520-15188539 MS.gene017921:CDS 40.0%
GACATGTGTGAATATGCTCA+TGG - chr7.1:15187619-15187638 MS.gene017921:CDS 40.0%
GAGGAGCTACTTCAAATTGA+CGG - chr7.1:15187199-15187218 MS.gene017921:CDS 40.0%
GATGAGGTTGGATTATGGTA+TGG - chr7.1:15186866-15186885 MS.gene017921:CDS 40.0%
GCAACAACTCCTTAATGAGT+TGG - chr7.1:15188071-15188090 MS.gene017921:CDS 40.0%
GTCTGTTGATCATGCTGTAT+TGG - chr7.1:15188785-15188804 MS.gene017921:CDS 40.0%
TATGTAGCAGCAACCATCAA+CGG + chr7.1:15186935-15186954 None:intergenic 40.0%
TATTAGCAGCAAGCTCAAGA+AGG + chr7.1:15186796-15186815 None:intergenic 40.0%
TCATTTGAGCTTGGGAACAA+TGG - chr7.1:15188621-15188640 MS.gene017921:CDS 40.0%
TGAGAATTGTGTGTCGAAGT+TGG + chr7.1:15186716-15186735 None:intergenic 40.0%
TGATTCATGGTGTGGTTTCT+CGG + chr7.1:15186740-15186759 None:intergenic 40.0%
TTCAACTTCAACAGGAGATC+CGG + chr7.1:15187325-15187344 None:intergenic 40.0%
TTTCACAAGTTCAAGCTTCG+GGG + chr7.1:15187170-15187189 None:intergenic 40.0%
TTTCACACAACTCTGTTGCT+TGG - chr7.1:15187920-15187939 MS.gene017921:CDS 40.0%
! AATGCCCTTTTGTTCATCCA+GGG - chr7.1:15187509-15187528 MS.gene017921:CDS 40.0%
! CCTTGTCCTGATTTTCGTAA+GGG - chr7.1:15187580-15187599 MS.gene017921:CDS 40.0%
! TTGATGGTTGCTGCTACATA+TGG - chr7.1:15186935-15186954 MS.gene017921:CDS 40.0%
! TTTTTGATGTCAGGAAGGGA+TGG + chr7.1:15187406-15187425 None:intergenic 40.0%
!! AAGACAGCTGATTTGTGAGT+CGG + chr7.1:15188249-15188268 None:intergenic 40.0%
!! GTATGTTTCAACTGGTTCTG+CGG - chr7.1:15187759-15187778 MS.gene017921:CDS 40.0%
!! TAGTGCTGGCTGTAATCTTA+GGG - chr7.1:15187225-15187244 MS.gene017921:CDS 40.0%
!!! GCTGTTTTTGATGTCAGGAA+GGG + chr7.1:15187410-15187429 None:intergenic 40.0%
!!! TGCTGTTTTTGATGTCAGGA+AGG + chr7.1:15187411-15187430 None:intergenic 40.0%
AAGAATGTCTCCACGAAACG+TGG - chr7.1:15188383-15188402 MS.gene017921:CDS 45.0%
AATAAGCACGCGAACAAGGT+CGG + chr7.1:15187474-15187493 None:intergenic 45.0%
ACAGGCATGCCAACTCATTA+AGG + chr7.1:15188083-15188102 None:intergenic 45.0%
AGCAGATGGTCAATGAGCAA+AGG - chr7.1:15186906-15186925 MS.gene017921:CDS 45.0%
AGCCCAATCCAACTTACCAA+TGG + chr7.1:15188562-15188581 None:intergenic 45.0%
AGGACGGTACAAATTGTTCC+AGG - chr7.1:15187692-15187711 MS.gene017921:CDS 45.0%
ATATAGAACCCGTCTCTGCA+AGG - chr7.1:15187672-15187691 MS.gene017921:CDS 45.0%
ATTATGGTATGGTCGTCGCA+AGG - chr7.1:15186877-15186896 MS.gene017921:CDS 45.0%
ATTGACATCCTTGAGCCCAT+TGG + chr7.1:15188420-15188439 None:intergenic 45.0%
CAAGCACCCTTACGAAAATC+AGG + chr7.1:15187589-15187608 None:intergenic 45.0%
CCAATCCAACTTACCAATGG+GGG + chr7.1:15188559-15188578 None:intergenic 45.0%
CCCAATCCAACTTACCAATG+GGG + chr7.1:15188560-15188579 None:intergenic 45.0%
CCCTTACGAAAATCAGGACA+AGG + chr7.1:15187583-15187602 None:intergenic 45.0%
CCTAATTCCGTGGATGCTAA+CGG - chr7.1:15187115-15187134 MS.gene017921:CDS 45.0%
CGAGGAGCCTGATTTATCAT+GGG - chr7.1:15188644-15188663 MS.gene017921:CDS 45.0%
CGGCCATTGTATGTTTCAAC+TGG - chr7.1:15187751-15187770 MS.gene017921:CDS 45.0%
CTAAGATTACAGCCAGCACT+AGG + chr7.1:15187226-15187245 None:intergenic 45.0%
CTAATTCCGTGGATGCTAAC+GGG - chr7.1:15187116-15187135 MS.gene017921:CDS 45.0%
CTGCTAATAACGACGTGGAA+GGG - chr7.1:15186807-15186826 MS.gene017921:CDS 45.0%
GACATGACAGACATCGAAGA+AGG + chr7.1:15187856-15187875 None:intergenic 45.0%
GACTGCACCCATGATAAATC+AGG + chr7.1:15188654-15188673 None:intergenic 45.0%
GATAGAGACGGAGATGAAGA+CGG + chr7.1:15186692-15186711 None:intergenic 45.0%
GATGCAGCTTGATCATCTTG+TGG - chr7.1:15188824-15188843 MS.gene017921:CDS 45.0%
GCCCAATCCAACTTACCAAT+GGG + chr7.1:15188561-15188580 None:intergenic 45.0%
GTCGAAGTTGGAGATAGAGA+CGG + chr7.1:15186704-15186723 None:intergenic 45.0%
GTGGAACCTATCTCTCCAAT+GGG - chr7.1:15188402-15188421 MS.gene017921:CDS 45.0%
GTTGATATCAACAGGCCTTG+TGG - chr7.1:15186998-15187017 MS.gene017921:CDS 45.0%
TAATTCCGTGGATGCTAACG+GGG - chr7.1:15187117-15187136 MS.gene017921:CDS 45.0%
TCAAAATGGGAATCCCCCAT+TGG - chr7.1:15188543-15188562 MS.gene017921:CDS 45.0%
TCTCCCCTGGATGAACAAAA+GGG + chr7.1:15187516-15187535 None:intergenic 45.0%
TCTTATGGTGTTCAGCCATC+AGG - chr7.1:15188360-15188379 MS.gene017921:CDS 45.0%
TCTTTCTTCTCAGATCCAGC+AGG + chr7.1:15187370-15187389 None:intergenic 45.0%
TGAGTATGATCCTACATCGG+TGG - chr7.1:15186844-15186863 MS.gene017921:CDS 45.0%
TGTGAAATGCCATTGCCAGA+AGG + chr7.1:15187907-15187926 None:intergenic 45.0%
TTATGGTATGGTCGTCGCAA+GGG - chr7.1:15186878-15186897 MS.gene017921:CDS 45.0%
TTATTGCAGGCGGCTTCTTA+TGG - chr7.1:15188345-15188364 MS.gene017921:CDS 45.0%
TTCTCCCCTGGATGAACAAA+AGG + chr7.1:15187517-15187536 None:intergenic 45.0%
! AGACGGGTTCTATATTGTGC+AGG + chr7.1:15187667-15187686 None:intergenic 45.0%
! AGGGCATTCAGTCCAATCAT+GGG + chr7.1:15187497-15187516 None:intergenic 45.0%
! ATGCCCTTTTGTTCATCCAG+GGG - chr7.1:15187510-15187529 MS.gene017921:CDS 45.0%
! CCCCATTGGTAAGTTGGATT+GGG - chr7.1:15188557-15188576 MS.gene017921:CDS 45.0%
! CCCTTGTCCTGATTTTCGTA+AGG - chr7.1:15187579-15187598 MS.gene017921:CDS 45.0%
! GAATGCCCTTTTGTTCATCC+AGG - chr7.1:15187508-15187527 MS.gene017921:CDS 45.0%
!! AAGGGCATTCAGTCCAATCA+TGG + chr7.1:15187498-15187517 None:intergenic 45.0%
!! CTAGTGCTGGCTGTAATCTT+AGG - chr7.1:15187224-15187243 MS.gene017921:CDS 45.0%
!!! ATTTTCGTAAGGGTGCTTGC+CGG - chr7.1:15187590-15187609 MS.gene017921:CDS 45.0%
AACTTCAACAGGAGATCCGG+TGG + chr7.1:15187322-15187341 None:intergenic 50.0%
ACTTTCTCGGGTCCCTTCTT+CGG + chr7.1:15187543-15187562 None:intergenic 50.0%
AGATGCAAGGCTGGGATGTT+TGG + chr7.1:15187952-15187971 None:intergenic 50.0%
ATGGGTGGAGTGAATGGTGA+AGG + chr7.1:15187880-15187899 None:intergenic 50.0%
CAAATTGACGGTCCTAGTGC+TGG - chr7.1:15187211-15187230 MS.gene017921:CDS 50.0%
CAGATCCAGCAGGAGAAAGA+GGG + chr7.1:15187360-15187379 None:intergenic 50.0%
CATATTCATTCCCTCACCCG+AGG + chr7.1:15188751-15188770 None:intergenic 50.0%
CATGGCTGCAGCAAAATCCA+TGG + chr7.1:15187815-15187834 None:intergenic 50.0%
CCATTGCCAGAAGGTGACAT+GGG + chr7.1:15187898-15187917 None:intergenic 50.0%
CCGTTAGCATCCACGGAATT+AGG + chr7.1:15187118-15187137 None:intergenic 50.0%
CGCGTGCTTATTCCCATGAT+TGG - chr7.1:15187482-15187501 MS.gene017921:CDS 50.0%
CGGTGGATGAGGTTGGATTA+TGG - chr7.1:15186861-15186880 MS.gene017921:CDS 50.0%
CGTGGAACCTATCTCTCCAA+TGG - chr7.1:15188401-15188420 MS.gene017921:CDS 50.0%
CGTGGAGACATTCTTCCTGA+TGG + chr7.1:15188378-15188397 None:intergenic 50.0%
CTTGAGCCCATTGGAGAGAT+AGG + chr7.1:15188411-15188430 None:intergenic 50.0%
GAAGAGCAGTGCTCTTGTCA+AGG + chr7.1:15187024-15187043 None:intergenic 50.0%
GAGATAGGTTCCACGTTTCG+TGG + chr7.1:15188396-15188415 None:intergenic 50.0%
GCGAGGAGCCTGATTTATCA+TGG - chr7.1:15188643-15188662 MS.gene017921:CDS 50.0%
GCTCACAATGCGGATGATGT+TGG - chr7.1:15188579-15188598 MS.gene017921:CDS 50.0%
GCTGCTAATAACGACGTGGA+AGG - chr7.1:15186806-15186825 MS.gene017921:CDS 50.0%
GGAATCCCCCATTGGTAAGT+TGG - chr7.1:15188551-15188570 MS.gene017921:CDS 50.0%
GGCAAAGAAGCAAACTCTCC+TGG + chr7.1:15187713-15187732 None:intergenic 50.0%
TACAATGGCCGAAGCTCTTC+AGG + chr7.1:15187742-15187761 None:intergenic 50.0%
TCAGATCCAGCAGGAGAAAG+AGG + chr7.1:15187361-15187380 None:intergenic 50.0%
TCAGGAAGGGATGGATCAAC+AGG + chr7.1:15187397-15187416 None:intergenic 50.0%
TCTAACAGTCTTAGCCGCTC+CGG - chr7.1:15188120-15188139 MS.gene017921:CDS 50.0%
TGAAGCTGCTTCTTGCAGCA+GGG - chr7.1:15187086-15187105 MS.gene017921:CDS 50.0%
TGATCCTACATCGGTGGATG+AGG - chr7.1:15186850-15186869 MS.gene017921:CDS 50.0%
TGGGAATAAGCACGCGAACA+AGG + chr7.1:15187478-15187497 None:intergenic 50.0%
TTCCAGGAAGATGCAAGGCT+GGG + chr7.1:15187960-15187979 None:intergenic 50.0%
TTCTCAGGTGAAGCCGACAA+AGG + chr7.1:15187283-15187302 None:intergenic 50.0%
TTGTACCGTCCTTGCAGAGA+CGG + chr7.1:15187684-15187703 None:intergenic 50.0%
! AACAGCATTTTCAGCCCCAC+CGG + chr7.1:15187059-15187078 None:intergenic 50.0%
! CCCCCATTGGTAAGTTGGAT+TGG - chr7.1:15188556-15188575 MS.gene017921:CDS 50.0%
! CTATCTCTCCAATGGGCTCA+AGG - chr7.1:15188409-15188428 MS.gene017921:CDS 50.0%
! GCTTGCTGCTAATAACGACG+TGG - chr7.1:15186802-15186821 MS.gene017921:CDS 50.0%
! GTTGGATTGGGCTCACAATG+CGG - chr7.1:15188569-15188588 MS.gene017921:CDS 50.0%
!! TTGTCGGCTTCACCTGAGAA+CGG - chr7.1:15187283-15187302 MS.gene017921:CDS 50.0%
AACTCCATGCTTGCAGCTGC+TGG - chr7.1:15188501-15188520 MS.gene017921:CDS 55.0%
AAGGCTGGGATGTTTGGCTG+AGG + chr7.1:15187946-15187965 None:intergenic 55.0%
ACGATCCCCGTTAGCATCCA+CGG + chr7.1:15187125-15187144 None:intergenic 55.0%
ACTCCACCCATGTCACCTTC+TGG - chr7.1:15187889-15187908 MS.gene017921:CDS 55.0%
AGAACCCGTCTCTGCAAGGA+CGG - chr7.1:15187676-15187695 MS.gene017921:CDS 55.0%
AGGGGAGAATGCCCGAAGAA+GGG - chr7.1:15187528-15187547 MS.gene017921:CDS 55.0%
AGGGGCTGATCCTAATTCCG+TGG - chr7.1:15187105-15187124 MS.gene017921:CDS 55.0%
ATCCCAGCCTTGCATCTTCC+TGG - chr7.1:15187955-15187974 MS.gene017921:CDS 55.0%
ATGGCTTCATTCGACCGGAG+CGG + chr7.1:15188137-15188156 None:intergenic 55.0%
CCAACCTCATCCACCGATGT+AGG + chr7.1:15186857-15186876 None:intergenic 55.0%
CCCACACTCCTGAAGAGCTT+CGG - chr7.1:15187731-15187750 MS.gene017921:CDS 55.0%
CCCATGTCACCTTCTGGCAA+TGG - chr7.1:15187895-15187914 MS.gene017921:CDS 55.0%
CCTACATCGGTGGATGAGGT+TGG - chr7.1:15186854-15186873 MS.gene017921:CDS 55.0%
CTTCCAGGAAGATGCAAGGC+TGG + chr7.1:15187961-15187980 None:intergenic 55.0%
CTTTCTCGGGTCCCTTCTTC+GGG + chr7.1:15187542-15187561 None:intergenic 55.0%
GAACTCCCTCTTTCTCCTGC+TGG - chr7.1:15187352-15187371 MS.gene017921:CDS 55.0%
GAAGCTGCTTCTTGCAGCAG+GGG - chr7.1:15187087-15187106 MS.gene017921:CDS 55.0%
GACATCGAAGAAGGTGAGCC+AGG + chr7.1:15187847-15187866 None:intergenic 55.0%
GCCATTGCCAGAAGGTGACA+TGG + chr7.1:15187899-15187918 None:intergenic 55.0%
GGGCTCAAGGATGTCAATGC+TGG - chr7.1:15188422-15188441 MS.gene017921:CDS 55.0%
GGTGACATGGGTGGAGTGAA+TGG + chr7.1:15187886-15187905 None:intergenic 55.0%
GTCAAGCACGTCTTCTGCCA+TGG - chr7.1:15187795-15187814 MS.gene017921:CDS 55.0%
GTGAAGCTGCTTCTTGCAGC+AGG - chr7.1:15187085-15187104 MS.gene017921:CDS 55.0%
GTGCTCTTGTCAAGGCCACA+AGG + chr7.1:15187016-15187035 None:intergenic 55.0%
TCAGGTGAAGCCGACAAAGG+AGG + chr7.1:15187280-15187299 None:intergenic 55.0%
TCGCAAGGGATCGAAGCAGA+TGG - chr7.1:15186892-15186911 MS.gene017921:CDS 55.0%
TGAGCAAAGGACGCCGTTGA+TGG - chr7.1:15186919-15186938 MS.gene017921:CDS 55.0%
TGAGCCAGGCAACATGCTCA+TGG + chr7.1:15187833-15187852 None:intergenic 55.0%
TGAGCTTGGGAACAATGGCG+AGG - chr7.1:15188626-15188645 MS.gene017921:CDS 55.0%
TGTACCGTCCTTGCAGAGAC+GGG + chr7.1:15187683-15187702 None:intergenic 55.0%
TTCAACAGGAGATCCGGTGG+TGG + chr7.1:15187319-15187338 None:intergenic 55.0%
TTGCCAGAAGGTGACATGGG+TGG + chr7.1:15187895-15187914 None:intergenic 55.0%
! CCGAAGCTCTTCAGGAGTGT+GGG + chr7.1:15187734-15187753 None:intergenic 55.0%
!! GCTCTTCACTGTGCTGCTTC+CGG - chr7.1:15187037-15187056 MS.gene017921:CDS 55.0%
!! TGTCGGCTTCACCTGAGAAC+GGG - chr7.1:15187284-15187303 MS.gene017921:CDS 55.0%
!! TTCACTGTGCTGCTTCCGGT+GGG - chr7.1:15187041-15187060 MS.gene017921:CDS 55.0%
!!! CTCATGGGGTTTTCGAGTGC+TGG - chr7.1:15187635-15187654 MS.gene017921:CDS 55.0%
AGACGTGCTTGACCGAGGTG+AGG + chr7.1:15187788-15187807 None:intergenic 60.0%
AGCCTAAGCTTCCGCGAGCA+CGG - chr7.1:15188474-15188493 MS.gene017921:CDS 60.0%
ATTCACACATGTCCCCGCGC+CGG + chr7.1:15187612-15187631 None:intergenic 60.0%
CAGGGGAGAATGCCCGAAGA+AGG - chr7.1:15187527-15187546 MS.gene017921:CDS 60.0%
CTTCTTCGGGCATTCTCCCC+TGG + chr7.1:15187529-15187548 None:intergenic 60.0%
GACGGAGATGAAGACGGCAC+AGG + chr7.1:15186686-15186705 None:intergenic 60.0%
GACGTGCTTGACCGAGGTGA+GGG + chr7.1:15187787-15187806 None:intergenic 60.0%
GCAGAAGACGTGCTTGACCG+AGG + chr7.1:15187793-15187812 None:intergenic 60.0%
GCAGCCATGAGCATGTTGCC+TGG - chr7.1:15187826-15187845 MS.gene017921:CDS 60.0%
GCCGAAGCTCTTCAGGAGTG+TGG + chr7.1:15187735-15187754 None:intergenic 60.0%
GGAGAAGGAGACCCGTTCTC+AGG + chr7.1:15187298-15187317 None:intergenic 60.0%
GTTCTGCGGTTCCCTCACCT+CGG - chr7.1:15187773-15187792 MS.gene017921:CDS 60.0%
TGAGCCAGCAGCTGCAAGCA+TGG + chr7.1:15188508-15188527 None:intergenic 60.0%
TGGAGTTAGAGCCGTGCTCG+CGG + chr7.1:15188488-15188507 None:intergenic 60.0%
!! AGGAGATCCGGTGGTGGAGA+AGG + chr7.1:15187313-15187332 None:intergenic 60.0%
!! CTTCACTGTGCTGCTTCCGG+TGG - chr7.1:15187040-15187059 MS.gene017921:CDS 60.0%
!! TCACTGTGCTGCTTCCGGTG+GGG - chr7.1:15187042-15187061 MS.gene017921:CDS 60.0%
AGCCGTGCTCGCGGAAGCTT+AGG + chr7.1:15188479-15188498 None:intergenic 65.0%
AGCTGGCGCAGCACCTGAGA+TGG + chr7.1:15188724-15188743 None:intergenic 65.0%
CGGGTCTCCTTCTCCACCAC+CGG - chr7.1:15187303-15187322 MS.gene017921:CDS 65.0%
! ATCTCAGGTGCTGCGCCAGC+TGG - chr7.1:15188723-15188742 MS.gene017921:CDS 65.0%
! CCAGCTGGTTCCTCGGGTGA+GGG - chr7.1:15188738-15188757 MS.gene017921:CDS 65.0%
! TGCTGCGCCAGCTGGTTCCT+CGG - chr7.1:15188731-15188750 MS.gene017921:CDS 65.0%
CCCTCACCCGAGGAACCAGC+TGG + chr7.1:15188741-15188760 None:intergenic 70.0%
! GCCAGCTGGTTCCTCGGGTG+AGG - chr7.1:15188737-15188756 MS.gene017921:CDS 70.0%
! GCTGCGCCAGCTGGTTCCTC+GGG - chr7.1:15188732-15188751 MS.gene017921:CDS 70.0%
!! CGTAAGGGTGCTTGCCGGCG+CGG - chr7.1:15187595-15187614 MS.gene017921:CDS 70.0%
!! GTAAGGGTGCTTGCCGGCGC+GGG - chr7.1:15187596-15187615 MS.gene017921:CDS 70.0%
!! TAAGGGTGCTTGCCGGCGCG+GGG - chr7.1:15187597-15187616 MS.gene017921:CDS 70.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 15186656 15188860 15186656 ID=MS.gene017921
chr7.1 mRNA 15186656 15188860 15186656 ID=MS.gene017921.t1;Parent=MS.gene017921
chr7.1 exon 15186656 15188860 15186656 ID=MS.gene017921.t1.exon1;Parent=MS.gene017921.t1
chr7.1 CDS 15186656 15188860 15186656 ID=cds.MS.gene017921.t1;Parent=MS.gene017921.t1
Gene Sequence

>MS.gene017921

ATGTGCTGTGAGTCGGAGGGTTTAAAGCCTGTGCCGTCTTCATCTCCGTCTCTATCTCCAACTTCGACACACAATTCTCAACCGAGAAACCACACCATGAATCACTTAACTATCGGTACTGAAGATTCTTTTGCTAGCCTTCTTGAGCTTGCTGCTAATAACGACGTGGAAGGGTTCAAACGATTGATTGAGTATGATCCTACATCGGTGGATGAGGTTGGATTATGGTATGGTCGTCGCAAGGGATCGAAGCAGATGGTCAATGAGCAAAGGACGCCGTTGATGGTTGCTGCTACATATGGTAGCATTGATGTTATGAAAGTGATTATTTCTTTATCGGATGTTGATATCAACAGGCCTTGTGGCCTTGACAAGAGCACTGCTCTTCACTGTGCTGCTTCCGGTGGGGCTGAAAATGCTGTTGATGCTGTGAAGCTGCTTCTTGCAGCAGGGGCTGATCCTAATTCCGTGGATGCTAACGGGGATCGTCCGTTAGATGTTATTGTTTATTCCCCGAAGCTTGAACTTGTGAAAAACAGTCTTGAGGAGCTACTTCAAATTGACGGTCCTAGTGCTGGCTGTAATCTTAGGGTGATTACAAACTCGCTTAATTCTTATTCTCCTCCTTTGTCGGCTTCACCTGAGAACGGGTCTCCTTCTCCACCACCGGATCTCCTGTTGAAGTTGAAGTCAATTGAACTCCCTCTTTCTCCTGCTGGATCTGAGAAGAAAGAATATCCTGTTGATCCATCCCTTCCTGACATCAAAAACAGCATATACTCAACTGATGAATTCCGAATGTATTCTTTCAAGGTCCGACCTTGTTCGCGTGCTTATTCCCATGATTGGACTGAATGCCCTTTTGTTCATCCAGGGGAGAATGCCCGAAGAAGGGACCCGAGAAAGTATCACTACAGCTGTGTCCCTTGTCCTGATTTTCGTAAGGGTGCTTGCCGGCGCGGGGACATGTGTGAATATGCTCATGGGGTTTTCGAGTGCTGGCTGCATCCTGCACAATATAGAACCCGTCTCTGCAAGGACGGTACAAATTGTTCCAGGAGAGTTTGCTTCTTTGCCCACACTCCTGAAGAGCTTCGGCCATTGTATGTTTCAACTGGTTCTGCGGTTCCCTCACCTCGGTCAAGCACGTCTTCTGCCATGGATTTTGCTGCAGCCATGAGCATGTTGCCTGGCTCACCTTCTTCGATGTCTGTCATGTCTCCTTCACCATTCACTCCACCCATGTCACCTTCTGGCAATGGCATTTCACACAACTCTGTTGCTTGGCCTCAGCCAAACATCCCAGCCTTGCATCTTCCTGGAAGTAATCTTCAGTCTAGTCGTTTGAGATCTTCTCTCAATGCTAGAGATATTCATATGGATGATTTTGAGTTGTTATCCGATTATGATCAACAGCAACAACTCCTTAATGAGTTGGCATGCCTGTCTCCACGTCATATTAATTCTAACAGTCTTAGCCGCTCCGGTCGAATGAAGCCATTGAATCCATCAAATCTTGATGATCTCTTTTCTGCCGAGAGTTCTTCTCCTCGATATGCTGATCCAAATCTGACTTCAACTGTTTTTTCTCCGACTCACAAATCAGCTGTCTTTAATCAGTTTCAGCAGCAGCAGAACATGTTGTCACCAGTGAATACAAATTTTTCTTCTAAAAATGTTGATCATCATTTATTGCAGGCGGCTTCTTATGGTGTTCAGCCATCAGGAAGAATGTCTCCACGAAACGTGGAACCTATCTCTCCAATGGGCTCAAGGATGTCAATGCTGGCACAACGCGACAAGCAGCAACAATTTCGTAGCCTAAGCTTCCGCGAGCACGGCTCTAACTCCATGCTTGCAGCTGCTGGCTCAGTCAATAATTCTTGGTCAAAATGGGAATCCCCCATTGGTAAGTTGGATTGGGCTCACAATGCGGATGATGTTGGTAAACTCCGTAGATCATCTTCATTTGAGCTTGGGAACAATGGCGAGGAGCCTGATTTATCATGGGTGCAGTCACTTGTCAAAGAATCTCCAACTGAGATCAAAGAGAAATTGGCAACTTCCATCTCAGGTGCTGCGCCAGCTGGTTCCTCGGGTGAGGGAATGAATATGAGCACACAAATGGAGTCTGTTGATCATGCTGTATTGGGAACATGGCTTGAACAGATGCAGCTTGATCATCTTGTGGCTCAGCAAAACTGA
Protein sequence

>MS.gene017921.t1

MCCESEGLKPVPSSSPSLSPTSTHNSQPRNHTMNHLTIGTEDSFASLLELAANNDVEGFKRLIEYDPTSVDEVGLWYGRRKGSKQMVNEQRTPLMVAATYGSIDVMKVIISLSDVDINRPCGLDKSTALHCAASGGAENAVDAVKLLLAAGADPNSVDANGDRPLDVIVYSPKLELVKNSLEELLQIDGPSAGCNLRVITNSLNSYSPPLSASPENGSPSPPPDLLLKLKSIELPLSPAGSEKKEYPVDPSLPDIKNSIYSTDEFRMYSFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTNCSRRVCFFAHTPEELRPLYVSTGSAVPSPRSSTSSAMDFAAAMSMLPGSPSSMSVMSPSPFTPPMSPSGNGISHNSVAWPQPNIPALHLPGSNLQSSRLRSSLNARDIHMDDFELLSDYDQQQQLLNELACLSPRHINSNSLSRSGRMKPLNPSNLDDLFSAESSSPRYADPNLTSTVFSPTHKSAVFNQFQQQQNMLSPVNTNFSSKNVDHHLLQAASYGVQPSGRMSPRNVEPISPMGSRMSMLAQRDKQQQFRSLSFREHGSNSMLAAAGSVNNSWSKWESPIGKLDWAHNADDVGKLRRSSSFELGNNGEEPDLSWVQSLVKESPTEIKEKLATSISGAAPAGSSGEGMNMSTQMESVDHAVLGTWLEQMQLDHLVAQQN