Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018004.t1 | XP_003625279.1 | 85.4 | 295 | 41 | 1 | 1 | 293 | 1 | 295 | 2.60E-130 | 474.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018004.t1 | P46665 | 46.5 | 333 | 121 | 8 | 1 | 288 | 1 | 321 | 9.6e-57 | 221.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018004.t1 | G7KVF5 | 85.4 | 295 | 41 | 1 | 1 | 293 | 1 | 295 | 1.9e-130 | 474.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene018004.t1 | TF | HB-HD-ZIP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018004.t1 | MTR_7g093430 | 95.254 | 295 | 12 | 1 | 1 | 293 | 1 | 295 | 0.0 | 541 |
| MS.gene018004.t1 | MTR_1g054285 | 68.841 | 276 | 76 | 6 | 1 | 273 | 1 | 269 | 3.27e-116 | 336 |
| MS.gene018004.t1 | MTR_2g061030 | 80.263 | 152 | 20 | 2 | 135 | 283 | 181 | 325 | 2.39e-77 | 239 |
| MS.gene018004.t1 | MTR_4g100550 | 64.362 | 188 | 57 | 2 | 86 | 272 | 57 | 235 | 4.72e-73 | 226 |
| MS.gene018004.t1 | MTR_5g013010 | 61.538 | 195 | 67 | 4 | 86 | 279 | 71 | 258 | 4.34e-69 | 216 |
| MS.gene018004.t1 | MTR_4g097600 | 77.600 | 125 | 26 | 1 | 148 | 270 | 115 | 239 | 1.90e-65 | 206 |
| MS.gene018004.t1 | MTR_8g006705 | 65.341 | 176 | 48 | 3 | 104 | 269 | 86 | 258 | 3.54e-65 | 206 |
| MS.gene018004.t1 | MTR_5g014890 | 67.626 | 139 | 45 | 0 | 149 | 287 | 114 | 252 | 1.95e-64 | 204 |
| MS.gene018004.t1 | MTR_1g017090 | 62.590 | 139 | 50 | 1 | 157 | 293 | 129 | 267 | 1.61e-55 | 181 |
| MS.gene018004.t1 | MTR_4g084750 | 65.323 | 124 | 36 | 2 | 153 | 269 | 59 | 182 | 3.19e-48 | 159 |
| MS.gene018004.t1 | MTR_3g103590 | 67.939 | 131 | 40 | 2 | 149 | 278 | 136 | 265 | 8.70e-48 | 162 |
| MS.gene018004.t1 | MTR_2g038625 | 56.618 | 136 | 55 | 2 | 136 | 270 | 63 | 195 | 2.26e-40 | 140 |
| MS.gene018004.t1 | MTR_2g038580 | 56.618 | 136 | 55 | 2 | 136 | 270 | 63 | 195 | 2.26e-40 | 140 |
| MS.gene018004.t1 | MTR_4g126900 | 58.772 | 114 | 43 | 1 | 160 | 269 | 90 | 203 | 1.38e-35 | 127 |
| MS.gene018004.t1 | MTR_5g013010 | 54.032 | 124 | 50 | 3 | 86 | 209 | 71 | 187 | 1.05e-28 | 109 |
| MS.gene018004.t1 | MTR_6g007647 | 40.146 | 137 | 80 | 1 | 155 | 291 | 30 | 164 | 1.71e-19 | 85.9 |
| MS.gene018004.t1 | MTR_7g010020 | 44.737 | 114 | 59 | 1 | 139 | 248 | 61 | 174 | 1.85e-19 | 86.3 |
| MS.gene018004.t1 | MTR_1g061660 | 44.330 | 97 | 54 | 0 | 154 | 250 | 55 | 151 | 2.47e-19 | 85.1 |
| MS.gene018004.t1 | MTR_6g007647 | 40.146 | 137 | 80 | 1 | 155 | 291 | 64 | 198 | 3.25e-19 | 85.9 |
| MS.gene018004.t1 | MTR_5g039000 | 45.283 | 106 | 54 | 1 | 150 | 251 | 69 | 174 | 2.84e-18 | 83.2 |
| MS.gene018004.t1 | MTR_4g107650 | 48.077 | 104 | 52 | 1 | 144 | 245 | 79 | 182 | 5.11e-18 | 83.2 |
| MS.gene018004.t1 | MTR_8g468210 | 41.085 | 129 | 69 | 3 | 130 | 251 | 46 | 174 | 5.63e-18 | 82.4 |
| MS.gene018004.t1 | MTR_6g011610 | 39.726 | 146 | 77 | 3 | 110 | 244 | 44 | 189 | 3.02e-17 | 80.1 |
| MS.gene018004.t1 | MTR_5g038280 | 47.872 | 94 | 42 | 1 | 158 | 244 | 87 | 180 | 4.30e-17 | 80.5 |
| MS.gene018004.t1 | MTR_7g103340 | 41.935 | 93 | 54 | 0 | 153 | 245 | 58 | 150 | 6.90e-17 | 78.6 |
| MS.gene018004.t1 | MTR_6g011610 | 45.946 | 111 | 51 | 2 | 143 | 244 | 60 | 170 | 9.66e-17 | 78.6 |
| MS.gene018004.t1 | MTR_3g080100 | 45.283 | 106 | 49 | 2 | 149 | 245 | 9 | 114 | 1.59e-16 | 77.0 |
| MS.gene018004.t1 | MTR_3g080100 | 45.283 | 106 | 49 | 2 | 149 | 245 | 48 | 153 | 2.28e-16 | 77.4 |
| MS.gene018004.t1 | MTR_8g469430 | 45.745 | 94 | 44 | 1 | 158 | 244 | 89 | 182 | 5.77e-16 | 76.6 |
| MS.gene018004.t1 | MTR_8g089895 | 43.750 | 112 | 53 | 2 | 141 | 245 | 40 | 148 | 2.84e-15 | 75.1 |
| MS.gene018004.t1 | MTR_3g086790 | 35.294 | 170 | 89 | 4 | 119 | 279 | 33 | 190 | 4.90e-15 | 74.3 |
| MS.gene018004.t1 | MTR_8g026960 | 42.683 | 82 | 47 | 0 | 162 | 243 | 38 | 119 | 5.51e-12 | 64.7 |
| MS.gene018004.t1 | MTR_3g092150 | 41.935 | 93 | 47 | 1 | 161 | 246 | 41 | 133 | 7.42e-12 | 64.3 |
| MS.gene018004.t1 | MTR_5g029320 | 30.769 | 130 | 89 | 1 | 125 | 254 | 60 | 188 | 3.27e-11 | 64.3 |
| MS.gene018004.t1 | MTR_2g101720 | 35.246 | 122 | 60 | 1 | 161 | 282 | 145 | 247 | 7.62e-11 | 63.2 |
| MS.gene018004.t1 | MTR_5g019650 | 38.889 | 108 | 61 | 1 | 135 | 242 | 35 | 137 | 9.93e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018004.t1 | AT5G06710 | 51.713 | 321 | 91 | 10 | 1 | 273 | 1 | 305 | 2.24e-86 | 262 |
| MS.gene018004.t1 | AT5G47370 | 54.783 | 230 | 87 | 6 | 52 | 271 | 22 | 244 | 4.27e-70 | 218 |
| MS.gene018004.t1 | AT4G37790 | 81.967 | 122 | 22 | 0 | 149 | 270 | 117 | 238 | 5.22e-69 | 216 |
| MS.gene018004.t1 | AT3G60390 | 50.562 | 267 | 83 | 8 | 42 | 269 | 18 | 274 | 3.52e-68 | 214 |
| MS.gene018004.t1 | AT2G44910 | 49.618 | 262 | 97 | 8 | 46 | 272 | 17 | 278 | 8.28e-68 | 214 |
| MS.gene018004.t1 | AT2G22800 | 77.049 | 122 | 28 | 0 | 149 | 270 | 104 | 225 | 4.22e-65 | 205 |
| MS.gene018004.t1 | AT4G16780 | 62.857 | 175 | 57 | 3 | 106 | 272 | 70 | 244 | 4.84e-65 | 206 |
| MS.gene018004.t1 | AT4G17460 | 54.430 | 237 | 83 | 9 | 52 | 271 | 21 | 249 | 3.03e-63 | 201 |
| MS.gene018004.t1 | AT2G01430 | 61.029 | 136 | 51 | 2 | 135 | 270 | 116 | 249 | 1.40e-47 | 160 |
| MS.gene018004.t1 | AT1G70920 | 58.015 | 131 | 46 | 2 | 142 | 270 | 51 | 174 | 1.34e-39 | 137 |
| MS.gene018004.t1 | AT1G70920 | 58.015 | 131 | 46 | 2 | 142 | 270 | 21 | 144 | 1.43e-39 | 137 |
| MS.gene018004.t1 | AT5G06710 | 42.023 | 257 | 85 | 9 | 1 | 209 | 1 | 241 | 2.62e-39 | 139 |
| MS.gene018004.t1 | AT2G01430 | 62.667 | 75 | 28 | 0 | 135 | 209 | 116 | 190 | 1.42e-23 | 96.3 |
| MS.gene018004.t1 | AT1G26960 | 39.744 | 156 | 81 | 5 | 143 | 291 | 57 | 206 | 2.33e-18 | 82.8 |
| MS.gene018004.t1 | AT5G06710 | 36.087 | 230 | 83 | 10 | 1 | 182 | 1 | 214 | 3.25e-18 | 82.0 |
| MS.gene018004.t1 | AT5G06710 | 36.087 | 230 | 83 | 10 | 1 | 182 | 1 | 214 | 3.25e-18 | 82.0 |
| MS.gene018004.t1 | AT1G69780 | 45.872 | 109 | 56 | 2 | 140 | 245 | 64 | 172 | 3.84e-18 | 83.2 |
| MS.gene018004.t1 | AT2G36610 | 42.157 | 102 | 51 | 1 | 153 | 246 | 66 | 167 | 3.71e-17 | 78.2 |
| MS.gene018004.t1 | AT5G03790 | 39.823 | 113 | 67 | 1 | 153 | 264 | 72 | 184 | 4.38e-17 | 79.0 |
| MS.gene018004.t1 | AT3G01220 | 42.857 | 119 | 56 | 2 | 144 | 250 | 65 | 183 | 6.18e-17 | 79.3 |
| MS.gene018004.t1 | AT5G15150 | 45.000 | 120 | 55 | 4 | 136 | 247 | 92 | 208 | 1.70e-16 | 78.6 |
| MS.gene018004.t1 | AT3G01470 | 46.739 | 92 | 49 | 0 | 158 | 249 | 68 | 159 | 7.12e-16 | 76.3 |
| MS.gene018004.t1 | AT2G22430 | 45.455 | 99 | 50 | 1 | 154 | 248 | 58 | 156 | 4.92e-15 | 74.3 |
| MS.gene018004.t1 | AT5G65310 | 42.857 | 98 | 49 | 1 | 155 | 245 | 69 | 166 | 7.09e-15 | 73.9 |
| MS.gene018004.t1 | AT5G65310 | 42.857 | 98 | 49 | 1 | 155 | 245 | 51 | 148 | 7.26e-15 | 73.9 |
| MS.gene018004.t1 | AT1G27045 | 56.061 | 66 | 29 | 0 | 158 | 223 | 25 | 90 | 1.84e-14 | 70.9 |
| MS.gene018004.t1 | AT1G27045 | 56.061 | 66 | 29 | 0 | 158 | 223 | 25 | 90 | 1.84e-14 | 70.9 |
| MS.gene018004.t1 | AT1G27045 | 56.061 | 66 | 29 | 0 | 158 | 223 | 17 | 82 | 2.08e-14 | 70.5 |
| MS.gene018004.t1 | AT1G27045 | 56.061 | 66 | 29 | 0 | 158 | 223 | 68 | 133 | 2.54e-14 | 71.2 |
| MS.gene018004.t1 | AT1G27045 | 45.098 | 102 | 48 | 2 | 158 | 252 | 68 | 168 | 4.18e-14 | 70.9 |
| MS.gene018004.t1 | AT2G18550 | 45.361 | 97 | 52 | 1 | 148 | 244 | 52 | 147 | 4.92e-14 | 70.1 |
| MS.gene018004.t1 | AT4G40060 | 42.857 | 98 | 52 | 1 | 154 | 247 | 55 | 152 | 6.51e-14 | 70.9 |
| MS.gene018004.t1 | AT5G03790 | 42.045 | 88 | 51 | 0 | 153 | 240 | 72 | 159 | 1.11e-13 | 68.6 |
| MS.gene018004.t1 | AT2G46680 | 41.758 | 91 | 53 | 0 | 153 | 243 | 27 | 117 | 1.21e-13 | 69.7 |
| MS.gene018004.t1 | AT2G46680 | 41.758 | 91 | 53 | 0 | 153 | 243 | 27 | 117 | 1.42e-13 | 69.7 |
| MS.gene018004.t1 | AT4G36740 | 41.837 | 98 | 56 | 1 | 147 | 244 | 46 | 142 | 4.70e-12 | 64.7 |
| MS.gene018004.t1 | AT4G36740 | 41.837 | 98 | 56 | 1 | 147 | 244 | 45 | 141 | 4.77e-12 | 64.7 |
| MS.gene018004.t1 | AT3G61890 | 42.169 | 83 | 48 | 0 | 161 | 243 | 33 | 115 | 1.54e-11 | 63.5 |
Find 78 sgRNAs with CRISPR-Local
Find 207 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTTCTCGACTACTGTTTC+TGG | 0.172775 | 7.1:+14089191 | None:intergenic |
| CTTCGAATTCCCTGGCTTAA+TGG | 0.240731 | 7.1:-14089590 | MS.gene018004:CDS |
| ACCAGCGATGATGAAGAAAA+TGG | 0.272695 | 7.1:-14089153 | MS.gene018004:CDS |
| AATATGACGCTGCACTATTC+GGG | 0.319466 | 7.1:+14089259 | None:intergenic |
| CTCTAACAGAAGAAAATAAA+AGG | 0.327202 | 7.1:-14087052 | MS.gene018004:CDS |
| TAATATGACGCTGCACTATT+CGG | 0.334434 | 7.1:+14089258 | None:intergenic |
| CCACGAACGCCAACCGGAAT+TGG | 0.344951 | 7.1:+14089316 | None:intergenic |
| CCAATTCCGGTTGGCGTTCG+TGG | 0.360152 | 7.1:-14089316 | MS.gene018004:CDS |
| GAAGAAACTCAGACTCTCTA+AGG | 0.373372 | 7.1:-14089121 | MS.gene018004:CDS |
| TTGTTTAGTGGCAGTGGTTC+CGG | 0.381277 | 7.1:+14086911 | None:intergenic |
| CTCCACTTCTTCGAATTCCC+TGG | 0.385540 | 7.1:-14089598 | MS.gene018004:CDS |
| TATCGGATGTGAACCAATTC+CGG | 0.385580 | 7.1:-14089329 | MS.gene018004:CDS |
| CACTTCCGTTTGCTTTAACT+TGG | 0.385691 | 7.1:+14087106 | None:intergenic |
| GTCCACGTCAAGTAGAAGTT+TGG | 0.395922 | 7.1:-14087306 | MS.gene018004:CDS |
| AATCGAGATGGTTTGTTTAG+TGG | 0.400673 | 7.1:+14086899 | None:intergenic |
| TCATTATTGGCGGTGCCCAC+CGG | 0.402169 | 7.1:+14086872 | None:intergenic |
| TATCCTCCACGAACGCCAAC+CGG | 0.426122 | 7.1:+14089310 | None:intergenic |
| ATGGAGCTGGCTTTGAGCTT+AGG | 0.426776 | 7.1:-14089803 | MS.gene018004:CDS |
| CTATGTGTCCTTCTTGTGAA+AGG | 0.437758 | 7.1:-14086950 | MS.gene018004:CDS |
| GAGTCTGAGTTTCTTCCTTG+TGG | 0.443252 | 7.1:+14089128 | None:intergenic |
| AGAAAATAAAAGGTTACAAA+AGG | 0.465210 | 7.1:-14087042 | MS.gene018004:CDS |
| GATGGTTTGTTTAGTGGCAG+TGG | 0.466617 | 7.1:+14086905 | None:intergenic |
| AGTTCAATCACCGATGGAGC+TGG | 0.469281 | 7.1:-14089816 | None:intergenic |
| TTCGAAGAAGTGGAGAAGGC+TGG | 0.476464 | 7.1:+14089606 | None:intergenic |
| GTGGAGAAGGCTGGGAGTGA+AGG | 0.477756 | 7.1:+14089615 | None:intergenic |
| CACATAGTGAGAGTGGTAGC+TGG | 0.479169 | 7.1:+14086966 | None:intergenic |
| CAGAAACAGTAGTCGAGAAG+AGG | 0.481552 | 7.1:-14089190 | MS.gene018004:CDS |
| GGCTGCAGTTGGTGTGGAAC+CGG | 0.481908 | 7.1:-14089358 | MS.gene018004:intron |
| GAGTGAAGGACCGGTGTTGA+AGG | 0.484612 | 7.1:+14089629 | None:intergenic |
| GGCAGTGGTTCCGGTGGTGT+TGG | 0.486933 | 7.1:+14086920 | None:intergenic |
| TTTACTTGCACCATTAAGCC+AGG | 0.488537 | 7.1:+14089580 | None:intergenic |
| GGAAGAAGATTGAGCTGAAT+GGG | 0.496713 | 7.1:+14089650 | None:intergenic |
| CAAGTTAAAGCAAACGGAAG+TGG | 0.499846 | 7.1:-14087105 | MS.gene018004:CDS |
| AGTGGTTCCGGTGGTGTTGG+TGG | 0.508654 | 7.1:+14086923 | None:intergenic |
| CCAGCGATGATGAAGAAAAT+GGG | 0.527273 | 7.1:-14089152 | MS.gene018004:CDS |
| AGGAAGAAGATTGAGCTGAA+TGG | 0.527689 | 7.1:+14089649 | None:intergenic |
| AGAACACACCACTCTCAATC+CGG | 0.532530 | 7.1:-14089067 | MS.gene018004:intron |
| CAGGACCAAGTTAAAGCAAA+CGG | 0.533115 | 7.1:-14087111 | MS.gene018004:CDS |
| TATGTGTCCTTCTTGTGAAA+GGG | 0.534150 | 7.1:-14086949 | MS.gene018004:CDS |
| CAATCTTCTTCCTTCAACAC+CGG | 0.539071 | 7.1:-14089639 | MS.gene018004:CDS |
| GCAGAAACAGAAACTTGCTC+TGG | 0.539316 | 7.1:-14087347 | MS.gene018004:intron |
| AGAACCGTTGTCATTATTGG+CGG | 0.539567 | 7.1:+14086862 | None:intergenic |
| AAGCTCAAAGCCAGCTCCAT+CGG | 0.539731 | 7.1:+14089806 | None:intergenic |
| TCGAAGAAGTGGAGAAGGCT+GGG | 0.542272 | 7.1:+14089607 | None:intergenic |
| AGCCAGGGAATTCGAAGAAG+TGG | 0.543327 | 7.1:+14089596 | None:intergenic |
| GAAGGCTGGGAGTGAAGGAC+CGG | 0.549545 | 7.1:+14089620 | None:intergenic |
| GTGGCGACCCTTTCACAAGA+AGG | 0.556254 | 7.1:+14086942 | None:intergenic |
| GCTAAACCGTGTTCTTCAAG+TGG | 0.571158 | 7.1:+14089713 | None:intergenic |
| AGAAACAGTAGTCGAGAAGA+GGG | 0.577673 | 7.1:-14089189 | MS.gene018004:CDS |
| CCCACCGGTGGTAATCGAGA+TGG | 0.582759 | 7.1:+14086887 | None:intergenic |
| AGGGTCGCCACCAACACCAC+CGG | 0.588362 | 7.1:-14086930 | MS.gene018004:CDS |
| GCTGGAAGTTGCATGTAGAA+TGG | 0.591856 | 7.1:+14086984 | None:intergenic |
| ACCATCTCGATTACCACCGG+TGG | 0.592762 | 7.1:-14086888 | MS.gene018004:CDS |
| GGAATTCGAAGAAGTGGAGA+AGG | 0.592815 | 7.1:+14089602 | None:intergenic |
| AGAAGATTGAGCTGAATGGG+TGG | 0.595515 | 7.1:+14089653 | None:intergenic |
| TTCACATCCGATACTCTCAC+CGG | 0.595525 | 7.1:+14089339 | None:intergenic |
| AGAAGGACACATAGTGAGAG+TGG | 0.600200 | 7.1:+14086959 | None:intergenic |
| TGCAGCGTCATATTATCAGA+TGG | 0.603249 | 7.1:-14089250 | MS.gene018004:CDS |
| TATTATTACCGGATTGAGAG+TGG | 0.604923 | 7.1:+14089059 | None:intergenic |
| AACCAAACTTCTACTTGACG+TGG | 0.605331 | 7.1:+14087304 | None:intergenic |
| TTATTGGCGGTGCCCACCGG+TGG | 0.607951 | 7.1:+14086875 | None:intergenic |
| GTTTACGGCTGCAGTTGGTG+TGG | 0.608602 | 7.1:-14089364 | MS.gene018004:intron |
| CAGTAGTCGAGAAGAGGGTG+CGG | 0.609350 | 7.1:-14089184 | MS.gene018004:CDS |
| GGTTTCAGAATAGAAGAGCA+AGG | 0.612001 | 7.1:-14087285 | MS.gene018004:intron |
| ATGAAGAAAATGGGTCCACA+AGG | 0.617090 | 7.1:-14089143 | MS.gene018004:CDS |
| GAGCTGAATGGGTGGATCTG+AGG | 0.625502 | 7.1:+14089661 | None:intergenic |
| TGTGGAACCGGTGAGAGTAT+CGG | 0.632478 | 7.1:-14089346 | MS.gene018004:CDS |
| ATTCCGGTTGGCGTTCGTGG+AGG | 0.635478 | 7.1:-14089313 | MS.gene018004:CDS |
| ATATGACGCTGCACTATTCG+GGG | 0.636746 | 7.1:+14089260 | None:intergenic |
| CCATCTCGATTACCACCGGT+GGG | 0.643789 | 7.1:-14086887 | MS.gene018004:CDS |
| TGCATACCACTTGAAGAACA+CGG | 0.644956 | 7.1:-14089719 | MS.gene018004:CDS |
| CAAACCATCTCGATTACCAC+CGG | 0.647502 | 7.1:-14086891 | MS.gene018004:CDS |
| TGAAACTGCAGCTCCCTCGT+CGG | 0.652204 | 7.1:+14089284 | None:intergenic |
| GGATGTGAACCAATTCCGGT+TGG | 0.657900 | 7.1:-14089325 | MS.gene018004:CDS |
| TTTAGTGGCAGTGGTTCCGG+TGG | 0.663174 | 7.1:+14086914 | None:intergenic |
| TTACTTGCACCATTAAGCCA+GGG | 0.674390 | 7.1:+14089581 | None:intergenic |
| CGTGGAGGATACTACCGACG+AGG | 0.695710 | 7.1:-14089298 | MS.gene018004:CDS |
| GTGGAGGATACTACCGACGA+GGG | 0.757148 | 7.1:-14089297 | MS.gene018004:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGTTTTTCATTTTTTTATT+AGG | + | chr7.1:14089541-14089560 | None:intergenic | 10.0% |
| !!! | GAAATAAATATTGTTATTTT+AGG | - | chr7.1:14089276-14089295 | MS.gene018004:CDS | 10.0% |
| !!! | TTATTTCTTAAAAAAAACAA+TGG | + | chr7.1:14089263-14089282 | None:intergenic | 10.0% |
| !! | AGTATAGTTACTTAAAAAAT+AGG | + | chr7.1:14087283-14087302 | None:intergenic | 15.0% |
| !! | GTATAGTTACTTAAAAAATA+GGG | + | chr7.1:14087282-14087301 | None:intergenic | 15.0% |
| !! | TAACTAAATAATCATTTAAC+TGG | + | chr7.1:14087949-14087968 | None:intergenic | 15.0% |
| !! | TATAGTTACTTAAAAAATAG+GGG | + | chr7.1:14087281-14087300 | None:intergenic | 15.0% |
| !! | TTAAGTTAAAATCATTCATA+AGG | + | chr7.1:14088937-14088956 | None:intergenic | 15.0% |
| !! | AAATGAAAAACATAATGTAC+AGG | - | chr7.1:14089548-14089567 | MS.gene018004:intron | 20.0% |
| !! | AGAAAATAAAAGGTTACAAA+AGG | - | chr7.1:14089636-14089655 | MS.gene018004:CDS | 20.0% |
| !! | TACTTATATGTGTATGTTTA+CGG | - | chr7.1:14087299-14087318 | MS.gene018004:CDS | 20.0% |
| !! | TATAATATAAAAAATCGCAG+AGG | - | chr7.1:14088141-14088160 | MS.gene018004:intron | 20.0% |
| !!! | AAACAATATTTTCTTTGAAC+CGG | - | chr7.1:14089171-14089190 | MS.gene018004:CDS | 20.0% |
| !!! | AAATAATTTGTGATAAGTGT+GGG | + | chr7.1:14087833-14087852 | None:intergenic | 20.0% |
| !!! | AATTTGTTTTGCAAATTTTC+TGG | + | chr7.1:14088795-14088814 | None:intergenic | 20.0% |
| !!! | ATCACAAATTATTTCTCTTT+TGG | - | chr7.1:14087839-14087858 | MS.gene018004:intron | 20.0% |
| !!! | TGTTTCTAAAAATTTTGTGT+AGG | + | chr7.1:14087753-14087772 | None:intergenic | 20.0% |
| ! | AAATGAAATGTTGTTAGAGA+GGG | + | chr7.1:14087648-14087667 | None:intergenic | 25.0% |
| ! | AGATATATGATGATATGTGT+GGG | + | chr7.1:14087865-14087884 | None:intergenic | 25.0% |
| ! | ATTACAGATAGAGAAGAAAA+AGG | - | chr7.1:14089100-14089119 | MS.gene018004:CDS | 25.0% |
| ! | CAATAACACAAACCAAAAAA+AGG | + | chr7.1:14088333-14088352 | None:intergenic | 25.0% |
| ! | CTCTAACAGAAGAAAATAAA+AGG | - | chr7.1:14089626-14089645 | MS.gene018004:CDS | 25.0% |
| ! | TAAAAATGAGGACCATATTA+GGG | - | chr7.1:14089233-14089252 | MS.gene018004:CDS | 25.0% |
| ! | TAAAATTGAGGACCATATTA+GGG | + | chr7.1:14088261-14088280 | None:intergenic | 25.0% |
| ! | TTAAAAATGAGGACCATATT+AGG | - | chr7.1:14089232-14089251 | MS.gene018004:CDS | 25.0% |
| ! | TTAAAATTGAGGACCATATT+AGG | + | chr7.1:14088262-14088281 | None:intergenic | 25.0% |
| ! | TTTAAATTACCCATTATAGC+CGG | - | chr7.1:14088301-14088320 | MS.gene018004:intron | 25.0% |
| !! | AATATGGTCCTCAATTTTAA+GGG | - | chr7.1:14088262-14088281 | MS.gene018004:intron | 25.0% |
| !! | ATCCAGAATTTTTGAATAGT+GGG | + | chr7.1:14088187-14088206 | None:intergenic | 25.0% |
| !! | ATGGATTTTTCTATCATGAA+TGG | - | chr7.1:14087447-14087466 | MS.gene018004:intron | 25.0% |
| !! | ATTATCTTTTCTGTGTTATG+AGG | - | chr7.1:14089429-14089448 | MS.gene018004:intron | 25.0% |
| !! | CAAATTTTCTGGATTGAATT+AGG | + | chr7.1:14088784-14088803 | None:intergenic | 25.0% |
| !! | CAGATTAATCTATTTTGTTG+AGG | + | chr7.1:14088395-14088414 | None:intergenic | 25.0% |
| !! | GAAATAATTTGTGATAAGTG+TGG | + | chr7.1:14087834-14087853 | None:intergenic | 25.0% |
| !! | GATTTTTATCATGCAATACA+TGG | - | chr7.1:14087699-14087718 | MS.gene018004:intron | 25.0% |
| !! | GCAGAGGATAATTTTATATA+TGG | - | chr7.1:14088157-14088176 | MS.gene018004:intron | 25.0% |
| !! | TAATATGGTCCTCAATTTTA+AGG | - | chr7.1:14088261-14088280 | MS.gene018004:intron | 25.0% |
| !! | TCAAACAAAGAGAATGTTTT+CGG | + | chr7.1:14086908-14086927 | None:intergenic | 25.0% |
| !! | TTAATCTATTTTGTTGAGGA+TGG | + | chr7.1:14088391-14088410 | None:intergenic | 25.0% |
| !! | TTTTCTATCATGAATGGTAA+TGG | - | chr7.1:14087453-14087472 | MS.gene018004:intron | 25.0% |
| !! | TTTTGTTGGGTAATTTTGTA+GGG | + | chr7.1:14086934-14086953 | None:intergenic | 25.0% |
| !!! | AATATGGTCCTCATTTTTAA+GGG | + | chr7.1:14089232-14089251 | None:intergenic | 25.0% |
| !!! | CTATAATGGGTAATTTAAAG+AGG | + | chr7.1:14088300-14088319 | None:intergenic | 25.0% |
| !!! | CTATATTTTGTTGTGTGAAA+CGG | - | chr7.1:14089146-14089165 | MS.gene018004:CDS | 25.0% |
| !!! | TAATATGGTCCTCATTTTTA+AGG | + | chr7.1:14089233-14089252 | None:intergenic | 25.0% |
| AAAAATGAGGACCATATTAG+GGG | - | chr7.1:14089234-14089253 | MS.gene018004:CDS | 30.0% | |
| AAAATTGAGGACCATATTAG+GGG | + | chr7.1:14088260-14088279 | None:intergenic | 30.0% | |
| ATCAAATGTTAAATCGTGAG+AGG | - | chr7.1:14088034-14088053 | MS.gene018004:intron | 30.0% | |
| CAAATGAAATGTTGTTAGAG+AGG | + | chr7.1:14087649-14087668 | None:intergenic | 30.0% | |
| CAAATTTCCTATGTAGAATG+AGG | + | chr7.1:14088631-14088650 | None:intergenic | 30.0% | |
| CTCTCAAAGTAAATGAAACA+AGG | - | chr7.1:14088681-14088700 | MS.gene018004:intron | 30.0% | |
| CTTGTTTCATTTACTTTGAG+AGG | + | chr7.1:14088683-14088702 | None:intergenic | 30.0% | |
| GAGATATATGATGATATGTG+TGG | + | chr7.1:14087866-14087885 | None:intergenic | 30.0% | |
| GTTGTTGAAGGTTAATTAGA+GGG | - | chr7.1:14089193-14089212 | MS.gene018004:CDS | 30.0% | |
| TCTAATTAACCTTCAACAAC+CGG | + | chr7.1:14089193-14089212 | None:intergenic | 30.0% | |
| TGTTGCCATATACAAAGAAA+GGG | - | chr7.1:14089067-14089086 | MS.gene018004:intron | 30.0% | |
| TTATTCACCTCATTCTACAT+AGG | - | chr7.1:14088621-14088640 | MS.gene018004:intron | 30.0% | |
| TTGATAGACCCTTAAAAATG+AGG | - | chr7.1:14089221-14089240 | MS.gene018004:CDS | 30.0% | |
| TTGTTGAAGGTTAATTAGAG+GGG | - | chr7.1:14089194-14089213 | MS.gene018004:CDS | 30.0% | |
| TTGTTGCCATATACAAAGAA+AGG | - | chr7.1:14089066-14089085 | MS.gene018004:intron | 30.0% | |
| ! | AATTGTTGTTGTGAGAAGAA+AGG | + | chr7.1:14088601-14088620 | None:intergenic | 30.0% |
| ! | ACACATAAGTTCTTTTGTGT+TGG | - | chr7.1:14088844-14088863 | MS.gene018004:intron | 30.0% |
| ! | ATCATGTTGTTAACCCTTTT+TGG | + | chr7.1:14088713-14088732 | None:intergenic | 30.0% |
| ! | GATCCAGAATTTTTGAATAG+TGG | + | chr7.1:14088188-14088207 | None:intergenic | 30.0% |
| ! | TCCAGAATTTTTGAATAGTG+GGG | + | chr7.1:14088186-14088205 | None:intergenic | 30.0% |
| ! | TTTGTCTATACAAAAGTACG+AGG | + | chr7.1:14087137-14087156 | None:intergenic | 30.0% |
| ! | TTTTATCATGCAATACATGG+AGG | - | chr7.1:14087702-14087721 | MS.gene018004:intron | 30.0% |
| !! | CATTTTTAAGGGTCTATCAA+TGG | + | chr7.1:14089221-14089240 | None:intergenic | 30.0% |
| !! | GTTTTGTTGGGTAATTTTGT+AGG | + | chr7.1:14086935-14086954 | None:intergenic | 30.0% |
| !! | TTAGGATTTGCTTTTGTCAA+TGG | + | chr7.1:14088766-14088785 | None:intergenic | 30.0% |
| !!! | GGAATCACTTTTTTGGTTTA+AGG | + | chr7.1:14086999-14087018 | None:intergenic | 30.0% |
| AAACAAGGAACAGACCAAAA+AGG | - | chr7.1:14088696-14088715 | MS.gene018004:intron | 35.0% | |
| AACAAGGAACAGACCAAAAA+GGG | - | chr7.1:14088697-14088716 | MS.gene018004:intron | 35.0% | |
| AACCAAAAAAAGGAAGTGAC+CGG | + | chr7.1:14088323-14088342 | None:intergenic | 35.0% | |
| AACCGGATCCAAAAAATGAT+GGG | - | chr7.1:14088977-14088996 | MS.gene018004:intron | 35.0% | |
| AAGAAGAGACAGAAGAAGAA+AGG | - | chr7.1:14089039-14089058 | MS.gene018004:intron | 35.0% | |
| AAGGGTTAACAACATGATAC+TGG | - | chr7.1:14088715-14088734 | MS.gene018004:intron | 35.0% | |
| ATAGAAGAGCAAGGTAACTA+AGG | - | chr7.1:14089402-14089421 | MS.gene018004:intron | 35.0% | |
| ATCAAATGTGAAATCGTGAG+AGG | - | chr7.1:14087920-14087939 | MS.gene018004:intron | 35.0% | |
| GGTTGTTGAAGGTTAATTAG+AGG | - | chr7.1:14089192-14089211 | MS.gene018004:CDS | 35.0% | |
| GTTGCCATATACAAAGAAAG+GGG | - | chr7.1:14089068-14089087 | MS.gene018004:CDS | 35.0% | |
| TAATATGACGCTGCACTATT+CGG | + | chr7.1:14087423-14087442 | None:intergenic | 35.0% | |
| TAGAAGAGCAAGGTAACTAA+GGG | - | chr7.1:14089403-14089422 | MS.gene018004:intron | 35.0% | |
| TATGTGTCCTTCTTGTGAAA+GGG | - | chr7.1:14089729-14089748 | MS.gene018004:CDS | 35.0% | |
| TATTATTACCGGATTGAGAG+TGG | + | chr7.1:14087622-14087641 | None:intergenic | 35.0% | |
| TCATAACACTCTTTCCAAAC+TGG | - | chr7.1:14088467-14088486 | MS.gene018004:intron | 35.0% | |
| TCATCCCCTTTCTTTGTATA+TGG | + | chr7.1:14089075-14089094 | None:intergenic | 35.0% | |
| ! | AAAAGTACGAGGAAACAAGA+GGG | + | chr7.1:14087126-14087145 | None:intergenic | 35.0% |
| ! | AGACACAAGTTCTTTTGTGT+TGG | - | chr7.1:14088873-14088892 | MS.gene018004:intron | 35.0% |
| ! | CCAGAATTTTTGAATAGTGG+GGG | + | chr7.1:14088185-14088204 | None:intergenic | 35.0% |
| ! | TATGAAGAAGCACAACAAGT+TGG | + | chr7.1:14088452-14088471 | None:intergenic | 35.0% |
| !! | AATCGAGATGGTTTGTTTAG+TGG | + | chr7.1:14089782-14089801 | None:intergenic | 35.0% |
| !! | AGAGAGGGTGTTATTATTAC+CGG | + | chr7.1:14087633-14087652 | None:intergenic | 35.0% |
| !! | AGTTTCTGTTTCTGCAGATT+TGG | + | chr7.1:14089326-14089345 | None:intergenic | 35.0% |
| !! | GTTTCTGTTTCTGCAGATTT+GGG | + | chr7.1:14089325-14089344 | None:intergenic | 35.0% |
| !! | TAGCTTTGTAGTCTTTGTGA+AGG | + | chr7.1:14088508-14088527 | None:intergenic | 35.0% |
| !! | TGGTATGCAGAAAGTTTTGT+TGG | + | chr7.1:14086948-14086967 | None:intergenic | 35.0% |
| !! | TTTGCTTTTGTCAATGGATC+TGG | + | chr7.1:14088760-14088779 | None:intergenic | 35.0% |
| !!! | AACCCATCATTTTTTGGATC+CGG | + | chr7.1:14088982-14089001 | None:intergenic | 35.0% |
| !!! | GATCTGAGGAATCACTTTTT+TGG | + | chr7.1:14087006-14087025 | None:intergenic | 35.0% |
| !!! | GGTATGCAGAAAGTTTTGTT+GGG | + | chr7.1:14086947-14086966 | None:intergenic | 35.0% |
| AACAATGGTAGCCCCTAATA+TGG | + | chr7.1:14089248-14089267 | None:intergenic | 40.0% | |
| AACCAAACTTCTACTTGACG+TGG | + | chr7.1:14089377-14089396 | None:intergenic | 40.0% | |
| AATATGACGCTGCACTATTC+GGG | + | chr7.1:14087422-14087441 | None:intergenic | 40.0% | |
| AATTTAAAGAGGTCCACCAG+TGG | + | chr7.1:14088289-14088308 | None:intergenic | 40.0% | |
| ACCAGCGATGATGAAGAAAA+TGG | - | chr7.1:14087525-14087544 | MS.gene018004:intron | 40.0% | |
| AGAAACAGTAGTCGAGAAGA+GGG | - | chr7.1:14087489-14087508 | MS.gene018004:intron | 40.0% | |
| AGGAAGAAGATTGAGCTGAA+TGG | + | chr7.1:14087032-14087051 | None:intergenic | 40.0% | |
| ATGAAGAAAATGGGTCCACA+AGG | - | chr7.1:14087535-14087554 | MS.gene018004:intron | 40.0% | |
| ATGGAGGAAAAACCTTCAAG+TGG | - | chr7.1:14087718-14087737 | MS.gene018004:intron | 40.0% | |
| CAAGTTAAAGCAAACGGAAG+TGG | - | chr7.1:14089573-14089592 | MS.gene018004:intron | 40.0% | |
| CAATCTTCTTCCTTCAACAC+CGG | - | chr7.1:14087039-14087058 | MS.gene018004:CDS | 40.0% | |
| CACTTCCGTTTGCTTTAACT+TGG | + | chr7.1:14089575-14089594 | None:intergenic | 40.0% | |
| CAGGACCAAGTTAAAGCAAA+CGG | - | chr7.1:14089567-14089586 | MS.gene018004:intron | 40.0% | |
| CCAGCGATGATGAAGAAAAT+GGG | - | chr7.1:14087526-14087545 | MS.gene018004:intron | 40.0% | |
| CCCCCACTATTCAAAAATTC+TGG | - | chr7.1:14088182-14088201 | MS.gene018004:intron | 40.0% | |
| CTATGTGTCCTTCTTGTGAA+AGG | - | chr7.1:14089728-14089747 | MS.gene018004:CDS | 40.0% | |
| GAACCGGATCCAAAAAATGA+TGG | - | chr7.1:14088976-14088995 | MS.gene018004:intron | 40.0% | |
| GAAGAAACTCAGACTCTCTA+AGG | - | chr7.1:14087557-14087576 | MS.gene018004:intron | 40.0% | |
| GGAAGAAGATTGAGCTGAAT+GGG | + | chr7.1:14087031-14087050 | None:intergenic | 40.0% | |
| GGTTTCAGAATAGAAGAGCA+AGG | - | chr7.1:14089393-14089412 | MS.gene018004:intron | 40.0% | |
| TATCGGATGTGAACCAATTC+CGG | - | chr7.1:14087349-14087368 | MS.gene018004:intron | 40.0% | |
| TGCAGCGTCATATTATCAGA+TGG | - | chr7.1:14087428-14087447 | MS.gene018004:intron | 40.0% | |
| TGCATACCACTTGAAGAACA+CGG | - | chr7.1:14086959-14086978 | MS.gene018004:CDS | 40.0% | |
| TGGAGGAAAAACCTTCAAGT+GGG | - | chr7.1:14087719-14087738 | MS.gene018004:intron | 40.0% | |
| TGTGATAAGTGTGGGTCATA+TGG | + | chr7.1:14087825-14087844 | None:intergenic | 40.0% | |
| TTACTTGCACCATTAAGCCA+GGG | + | chr7.1:14087100-14087119 | None:intergenic | 40.0% | |
| TTCTTTGAACCGGTTGTTGA+AGG | - | chr7.1:14089181-14089200 | MS.gene018004:CDS | 40.0% | |
| TTTACTTGCACCATTAAGCC+AGG | + | chr7.1:14087101-14087120 | None:intergenic | 40.0% | |
| ! | CAAAAGTACGAGGAAACAAG+AGG | + | chr7.1:14087127-14087146 | None:intergenic | 40.0% |
| ! | GAAGCACAACAAGTTGGATT+TGG | + | chr7.1:14088446-14088465 | None:intergenic | 40.0% |
| !!! | TGCTGCAACCCATCATTTTT+TGG | + | chr7.1:14088988-14089007 | None:intergenic | 40.0% |
| AAGGAAGTGACCGGCTATAA+TGG | + | chr7.1:14088314-14088333 | None:intergenic | 45.0% | |
| AGAACACACCACTCTCAATC+CGG | - | chr7.1:14087611-14087630 | MS.gene018004:intron | 45.0% | |
| AGAAGATTGAGCTGAATGGG+TGG | + | chr7.1:14087028-14087047 | None:intergenic | 45.0% | |
| AGAAGGACACATAGTGAGAG+TGG | + | chr7.1:14089722-14089741 | None:intergenic | 45.0% | |
| AGACCCGTATATCACTGAAC+CGG | - | chr7.1:14088960-14088979 | MS.gene018004:intron | 45.0% | |
| AGGAAGTGACCGGCTATAAT+GGG | + | chr7.1:14088313-14088332 | None:intergenic | 45.0% | |
| ATATGACGCTGCACTATTCG+GGG | + | chr7.1:14087421-14087440 | None:intergenic | 45.0% | |
| CAAACCATCTCGATTACCAC+CGG | - | chr7.1:14089787-14089806 | MS.gene018004:CDS | 45.0% | |
| CAGAAACAGTAGTCGAGAAG+AGG | - | chr7.1:14087488-14087507 | MS.gene018004:intron | 45.0% | |
| CCAGTGGTCCCTTAAAATTG+AGG | + | chr7.1:14088273-14088292 | None:intergenic | 45.0% | |
| CTCTTCTCGACTACTGTTTC+TGG | + | chr7.1:14087490-14087509 | None:intergenic | 45.0% | |
| CTTCGAATTCCCTGGCTTAA+TGG | - | chr7.1:14087088-14087107 | MS.gene018004:CDS | 45.0% | |
| GAGGAAAAACCTTCAAGTGG+GGG | - | chr7.1:14087721-14087740 | MS.gene018004:intron | 45.0% | |
| GAGTCTGAGTTTCTTCCTTG+TGG | + | chr7.1:14087553-14087572 | None:intergenic | 45.0% | |
| GATCCGGTTCAGTGATATAC+GGG | + | chr7.1:14088966-14088985 | None:intergenic | 45.0% | |
| GCAAGGAGAGTTTACCAGTT+TGG | + | chr7.1:14088484-14088503 | None:intergenic | 45.0% | |
| GCTAAACCGTGTTCTTCAAG+TGG | + | chr7.1:14086968-14086987 | None:intergenic | 45.0% | |
| GCTGGAAGTTGCATGTAGAA+TGG | + | chr7.1:14089697-14089716 | None:intergenic | 45.0% | |
| GGAATTCGAAGAAGTGGAGA+AGG | + | chr7.1:14087079-14087098 | None:intergenic | 45.0% | |
| GGAGGAAAAACCTTCAAGTG+GGG | - | chr7.1:14087720-14087739 | MS.gene018004:intron | 45.0% | |
| GGATCCGGTTCAGTGATATA+CGG | + | chr7.1:14088967-14088986 | None:intergenic | 45.0% | |
| GTAGTCTTTGTGAAGGAGCA+AGG | + | chr7.1:14088501-14088520 | None:intergenic | 45.0% | |
| GTCCACGTCAAGTAGAAGTT+TGG | - | chr7.1:14089372-14089391 | MS.gene018004:intron | 45.0% | |
| TGTATGTTTACGGCTGCAGT+TGG | - | chr7.1:14087309-14087328 | MS.gene018004:CDS | 45.0% | |
| TTCACATCCGATACTCTCAC+CGG | + | chr7.1:14087342-14087361 | None:intergenic | 45.0% | |
| TTGAGGATGGTGCAGTAGAA+AGG | + | chr7.1:14088378-14088397 | None:intergenic | 45.0% | |
| TTGTTTAGTGGCAGTGGTTC+CGG | + | chr7.1:14089770-14089789 | None:intergenic | 45.0% | |
| ! | CCCATTTTCTTCATCATCGC+TGG | + | chr7.1:14087529-14087548 | None:intergenic | 45.0% |
| ! | GCAGAAACAGAAACTTGCTC+TGG | - | chr7.1:14089331-14089350 | MS.gene018004:CDS | 45.0% |
| !! | CAATTTTAAGGGACCACTGG+TGG | - | chr7.1:14088273-14088292 | MS.gene018004:intron | 45.0% |
| !! | CCTCAATTTTAAGGGACCAC+TGG | - | chr7.1:14088270-14088289 | MS.gene018004:intron | 45.0% |
| !! | GATGGTTTGTTTAGTGGCAG+TGG | + | chr7.1:14089776-14089795 | None:intergenic | 45.0% |
| !!! | AGCCGGTCACTTCCTTTTTT+TGG | - | chr7.1:14088318-14088337 | MS.gene018004:intron | 45.0% |
| !!! | GTTTTTGGCAGCCCCTAATA+TGG | - | chr7.1:14088246-14088265 | MS.gene018004:intron | 45.0% |
| !! | AAATAAACAAAATAAATATT+TGG | + | chr7.1:14089475-14089494 | None:intergenic | 5.0% |
| !!! | ATATATATATATATTGTTTT+TGG | - | chr7.1:14088231-14088250 | MS.gene018004:intron | 5.0% |
| AGCCAGGGAATTCGAAGAAG+TGG | + | chr7.1:14087085-14087104 | None:intergenic | 50.0% | |
| AGTAACATGCGGCTATACCC+AGG | - | chr7.1:14089008-14089027 | MS.gene018004:intron | 50.0% | |
| CACATAGTGAGAGTGGTAGC+TGG | + | chr7.1:14089715-14089734 | None:intergenic | 50.0% | |
| CTCCACTTCTTCGAATTCCC+TGG | - | chr7.1:14087080-14087099 | MS.gene018004:CDS | 50.0% | |
| GGATGTGAACCAATTCCGGT+TGG | - | chr7.1:14087353-14087372 | MS.gene018004:intron | 50.0% | |
| GGGTTGCAGCAAGTAACATG+CGG | - | chr7.1:14088997-14089016 | MS.gene018004:intron | 50.0% | |
| GTAACATGCGGCTATACCCA+GGG | - | chr7.1:14089009-14089028 | MS.gene018004:intron | 50.0% | |
| TAACATGCGGCTATACCCAG+GGG | - | chr7.1:14089010-14089029 | MS.gene018004:intron | 50.0% | |
| TCGAAGAAGTGGAGAAGGCT+GGG | + | chr7.1:14087074-14087093 | None:intergenic | 50.0% | |
| TCTCTTCTTCACCTTCCCCT+GGG | + | chr7.1:14089028-14089047 | None:intergenic | 50.0% | |
| TTCGAAGAAGTGGAGAAGGC+TGG | + | chr7.1:14087075-14087094 | None:intergenic | 50.0% | |
| ! | TGTGGAACCGGTGAGAGTAT+CGG | - | chr7.1:14087332-14087351 | MS.gene018004:CDS | 50.0% |
| !! | ATGGAGCTGGCTTTGAGCTT+AGG | - | chr7.1:14086875-14086894 | MS.gene018004:CDS | 50.0% |
| ACCATCTCGATTACCACCGG+TGG | - | chr7.1:14089790-14089809 | MS.gene018004:CDS | 55.0% | |
| CAGTAGTCGAGAAGAGGGTG+CGG | - | chr7.1:14087494-14087513 | MS.gene018004:intron | 55.0% | |
| CCATCTCGATTACCACCGGT+GGG | - | chr7.1:14089791-14089810 | MS.gene018004:CDS | 55.0% | |
| GAGCTGAATGGGTGGATCTG+AGG | + | chr7.1:14087020-14087039 | None:intergenic | 55.0% | |
| GTCTCTTCTTCACCTTCCCC+TGG | + | chr7.1:14089029-14089048 | None:intergenic | 55.0% | |
| GTGGAGGATACTACCGACGA+GGG | - | chr7.1:14087381-14087400 | MS.gene018004:intron | 55.0% | |
| GTGGCGACCCTTTCACAAGA+AGG | + | chr7.1:14089739-14089758 | None:intergenic | 55.0% | |
| TATCCTCCACGAACGCCAAC+CGG | + | chr7.1:14087371-14087390 | None:intergenic | 55.0% | |
| TGAAACTGCAGCTCCCTCGT+CGG | + | chr7.1:14087397-14087416 | None:intergenic | 55.0% | |
| TTTAGTGGCAGTGGTTCCGG+TGG | + | chr7.1:14089767-14089786 | None:intergenic | 55.0% | |
| ! | GAGTGAAGGACCGGTGTTGA+AGG | + | chr7.1:14087052-14087071 | None:intergenic | 55.0% |
| ! | GTTTACGGCTGCAGTTGGTG+TGG | - | chr7.1:14087314-14087333 | MS.gene018004:CDS | 55.0% |
| AGGCACAAGCCCCCACTTGA+AGG | + | chr7.1:14087733-14087752 | None:intergenic | 60.0% | |
| ATGCGGCTATACCCAGGGGA+AGG | - | chr7.1:14089014-14089033 | MS.gene018004:intron | 60.0% | |
| ATTCCGGTTGGCGTTCGTGG+AGG | - | chr7.1:14087365-14087384 | MS.gene018004:intron | 60.0% | |
| CCAATTCCGGTTGGCGTTCG+TGG | - | chr7.1:14087362-14087381 | MS.gene018004:intron | 60.0% | |
| CCACGAACGCCAACCGGAAT+TGG | + | chr7.1:14087365-14087384 | None:intergenic | 60.0% | |
| CCCACCGGTGGTAATCGAGA+TGG | + | chr7.1:14089794-14089813 | None:intergenic | 60.0% | |
| CGTGGAGGATACTACCGACG+AGG | - | chr7.1:14087380-14087399 | MS.gene018004:intron | 60.0% | |
| GAAGGCTGGGAGTGAAGGAC+CGG | + | chr7.1:14087061-14087080 | None:intergenic | 60.0% | |
| GTGGAGAAGGCTGGGAGTGA+AGG | + | chr7.1:14087066-14087085 | None:intergenic | 60.0% | |
| ! | AGTGGTTCCGGTGGTGTTGG+TGG | + | chr7.1:14089758-14089777 | None:intergenic | 60.0% |
| ! | GGCTGCAGTTGGTGTGGAAC+CGG | - | chr7.1:14087320-14087339 | MS.gene018004:CDS | 60.0% |
| AGGGTCGCCACCAACACCAC+CGG | - | chr7.1:14089748-14089767 | MS.gene018004:CDS | 65.0% | |
| GGCAGTGGTTCCGGTGGTGT+TGG | + | chr7.1:14089761-14089780 | None:intergenic | 65.0% | |
| TTATTGGCGGTGCCCACCGG+TGG | + | chr7.1:14089806-14089825 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 14086875 | 14089825 | 14086875 | ID=MS.gene018004 |
| chr7.1 | mRNA | 14086875 | 14089825 | 14086875 | ID=MS.gene018004.t1;Parent=MS.gene018004 |
| chr7.1 | exon | 14089585 | 14089825 | 14089585 | ID=MS.gene018004.t1.exon1;Parent=MS.gene018004.t1 |
| chr7.1 | CDS | 14089585 | 14089825 | 14089585 | ID=cds.MS.gene018004.t1;Parent=MS.gene018004.t1 |
| chr7.1 | exon | 14089068 | 14089372 | 14089068 | ID=MS.gene018004.t1.exon2;Parent=MS.gene018004.t1 |
| chr7.1 | CDS | 14089068 | 14089372 | 14089068 | ID=cds.MS.gene018004.t1;Parent=MS.gene018004.t1 |
| chr7.1 | exon | 14087286 | 14087365 | 14087286 | ID=MS.gene018004.t1.exon3;Parent=MS.gene018004.t1 |
| chr7.1 | CDS | 14087286 | 14087365 | 14087286 | ID=cds.MS.gene018004.t1;Parent=MS.gene018004.t1 |
| chr7.1 | exon | 14086875 | 14087130 | 14086875 | ID=MS.gene018004.t1.exon4;Parent=MS.gene018004.t1 |
| chr7.1 | CDS | 14086875 | 14087130 | 14086875 | ID=cds.MS.gene018004.t1;Parent=MS.gene018004.t1 |
| Gene Sequence |
| Protein sequence |