Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene018155.t1 | XP_003623721.1 | 97.5 | 237 | 5 | 1 | 1 | 236 | 1 | 237 | 9.60E-107 | 396.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene018155.t1 | O22131 | 47.6 | 227 | 103 | 4 | 21 | 233 | 38 | 262 | 1.2e-44 | 181.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene018155.t1 | G7L095 | 97.5 | 237 | 5 | 1 | 1 | 236 | 1 | 237 | 6.9e-107 | 396.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene018155.t1 | TF | LOB |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene018155.t1 | MTR_7g074990 | 97.468 | 237 | 5 | 1 | 1 | 236 | 1 | 237 | 1.05e-168 | 464 |
MS.gene018155.t1 | MTR_8g036085 | 57.209 | 215 | 86 | 5 | 20 | 233 | 23 | 232 | 3.77e-75 | 227 |
MS.gene018155.t1 | MTR_8g036105 | 64.234 | 137 | 46 | 1 | 3 | 136 | 1 | 137 | 5.87e-60 | 188 |
MS.gene018155.t1 | MTR_1g070205 | 61.719 | 128 | 41 | 2 | 20 | 141 | 12 | 137 | 3.05e-52 | 169 |
MS.gene018155.t1 | MTR_7g096610 | 71.154 | 104 | 30 | 0 | 17 | 120 | 5 | 108 | 4.64e-52 | 168 |
MS.gene018155.t1 | MTR_7g075230 | 58.088 | 136 | 53 | 4 | 12 | 143 | 4 | 139 | 3.76e-50 | 162 |
MS.gene018155.t1 | MTR_7g096530 | 64.035 | 114 | 41 | 0 | 8 | 121 | 2 | 115 | 7.38e-49 | 160 |
MS.gene018155.t1 | MTR_6g027710 | 58.537 | 123 | 45 | 1 | 19 | 135 | 39 | 161 | 4.44e-46 | 153 |
MS.gene018155.t1 | MTR_1g070220 | 63.889 | 108 | 39 | 0 | 7 | 114 | 2 | 109 | 4.29e-45 | 150 |
MS.gene018155.t1 | MTR_5g083960 | 51.724 | 145 | 63 | 2 | 13 | 157 | 32 | 169 | 3.28e-43 | 145 |
MS.gene018155.t1 | MTR_5g080470 | 63.725 | 102 | 37 | 0 | 18 | 119 | 5 | 106 | 6.23e-43 | 144 |
MS.gene018155.t1 | MTR_3g094690 | 57.759 | 116 | 48 | 1 | 13 | 128 | 40 | 154 | 5.02e-39 | 135 |
MS.gene018155.t1 | MTR_5g083230 | 48.855 | 131 | 66 | 1 | 18 | 148 | 4 | 133 | 1.11e-38 | 132 |
MS.gene018155.t1 | MTR_3g071590 | 56.481 | 108 | 46 | 1 | 14 | 121 | 2 | 108 | 2.74e-38 | 131 |
MS.gene018155.t1 | MTR_4g105170 | 53.226 | 124 | 56 | 2 | 18 | 141 | 9 | 130 | 5.67e-38 | 131 |
MS.gene018155.t1 | MTR_3g094690 | 57.759 | 116 | 47 | 2 | 13 | 128 | 40 | 153 | 2.27e-37 | 131 |
MS.gene018155.t1 | MTR_7g033800 | 60.606 | 99 | 38 | 1 | 17 | 115 | 8 | 105 | 5.92e-37 | 128 |
MS.gene018155.t1 | MTR_4g083680 | 54.867 | 113 | 44 | 3 | 12 | 120 | 5 | 114 | 9.97e-37 | 127 |
MS.gene018155.t1 | MTR_5g017950 | 58.491 | 106 | 43 | 1 | 16 | 121 | 4 | 108 | 3.80e-36 | 130 |
MS.gene018155.t1 | MTR_3g077240 | 60.606 | 99 | 38 | 1 | 16 | 114 | 6 | 103 | 4.70e-36 | 126 |
MS.gene018155.t1 | MTR_3g031660 | 52.174 | 115 | 54 | 1 | 15 | 129 | 2 | 115 | 1.06e-35 | 125 |
MS.gene018155.t1 | MTR_6g005070 | 58.586 | 99 | 40 | 1 | 17 | 115 | 6 | 103 | 1.15e-35 | 124 |
MS.gene018155.t1 | MTR_5g083010 | 50.000 | 110 | 54 | 1 | 12 | 121 | 3 | 111 | 1.32e-35 | 124 |
MS.gene018155.t1 | MTR_2g068760 | 53.097 | 113 | 48 | 2 | 11 | 121 | 4 | 113 | 1.34e-35 | 124 |
MS.gene018155.t1 | MTR_3g071420 | 52.778 | 108 | 50 | 1 | 8 | 115 | 2 | 108 | 3.78e-35 | 124 |
MS.gene018155.t1 | MTR_3g073690 | 55.238 | 105 | 46 | 1 | 17 | 121 | 6 | 109 | 7.37e-35 | 123 |
MS.gene018155.t1 | MTR_3g452660 | 54.386 | 114 | 51 | 1 | 16 | 129 | 3 | 115 | 1.87e-34 | 125 |
MS.gene018155.t1 | MTR_6g005080 | 56.436 | 101 | 43 | 1 | 15 | 115 | 5 | 104 | 2.69e-34 | 120 |
MS.gene018155.t1 | MTR_6g027700 | 55.000 | 100 | 45 | 0 | 20 | 119 | 7 | 106 | 3.73e-34 | 122 |
MS.gene018155.t1 | MTR_2g093310 | 49.091 | 110 | 55 | 1 | 19 | 128 | 32 | 140 | 3.64e-33 | 119 |
MS.gene018155.t1 | MTR_5g075020 | 62.136 | 103 | 38 | 1 | 19 | 121 | 42 | 143 | 4.10e-33 | 120 |
MS.gene018155.t1 | MTR_5g075020 | 62.136 | 103 | 38 | 1 | 19 | 121 | 46 | 147 | 6.24e-33 | 119 |
MS.gene018155.t1 | MTR_4g060950 | 48.649 | 111 | 55 | 2 | 19 | 128 | 23 | 132 | 1.19e-30 | 112 |
MS.gene018155.t1 | MTR_1g095850 | 49.505 | 101 | 50 | 1 | 21 | 121 | 73 | 172 | 2.10e-29 | 110 |
MS.gene018155.t1 | MTR_8g040900 | 61.176 | 85 | 32 | 1 | 16 | 100 | 3 | 86 | 4.98e-28 | 106 |
MS.gene018155.t1 | MTR_5g093010 | 44.037 | 109 | 60 | 1 | 21 | 129 | 6 | 113 | 6.95e-26 | 98.6 |
MS.gene018155.t1 | MTR_7g028905 | 42.342 | 111 | 63 | 1 | 19 | 129 | 4 | 113 | 1.82e-24 | 94.4 |
MS.gene018155.t1 | MTR_8g079660 | 43.137 | 102 | 57 | 1 | 20 | 121 | 8 | 108 | 3.53e-23 | 94.7 |
MS.gene018155.t1 | MTR_8g079620 | 44.118 | 102 | 56 | 1 | 20 | 121 | 8 | 108 | 4.67e-21 | 88.6 |
MS.gene018155.t1 | MTR_4g107450 | 39.000 | 100 | 60 | 1 | 15 | 114 | 5 | 103 | 6.44e-19 | 84.0 |
MS.gene018155.t1 | MTR_8g079580 | 40.777 | 103 | 59 | 2 | 20 | 121 | 8 | 109 | 2.92e-18 | 80.9 |
MS.gene018155.t1 | MTR_6g011250 | 35.417 | 144 | 81 | 4 | 16 | 149 | 5 | 146 | 1.96e-17 | 77.8 |
MS.gene018155.t1 | MTR_6g011230 | 28.571 | 147 | 93 | 2 | 15 | 161 | 6 | 140 | 1.61e-16 | 75.5 |
MS.gene018155.t1 | MTR_8g017090 | 32.673 | 101 | 67 | 1 | 21 | 121 | 13 | 112 | 2.03e-15 | 74.3 |
MS.gene018155.t1 | MTR_2g100020 | 34.653 | 101 | 65 | 1 | 21 | 121 | 20 | 119 | 6.47e-15 | 72.4 |
MS.gene018155.t1 | MTR_6g011200 | 37.374 | 99 | 60 | 2 | 21 | 118 | 10 | 107 | 6.65e-15 | 72.0 |
MS.gene018155.t1 | MTR_4g099230 | 35.000 | 100 | 63 | 2 | 21 | 119 | 3 | 101 | 1.03e-12 | 64.3 |
MS.gene018155.t1 | MTR_5g085390 | 28.986 | 138 | 89 | 3 | 21 | 150 | 10 | 146 | 1.56e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene018155.t1 | AT2G45420 | 50.667 | 225 | 95 | 4 | 23 | 233 | 40 | 262 | 1.19e-62 | 197 |
MS.gene018155.t1 | AT4G00220 | 49.770 | 217 | 94 | 5 | 23 | 233 | 20 | 227 | 6.57e-59 | 186 |
MS.gene018155.t1 | AT4G00210 | 68.182 | 132 | 32 | 2 | 6 | 137 | 2 | 123 | 5.26e-58 | 183 |
MS.gene018155.t1 | AT2G45410 | 62.500 | 120 | 42 | 1 | 23 | 142 | 19 | 135 | 4.51e-51 | 165 |
MS.gene018155.t1 | AT3G03760 | 72.642 | 106 | 28 | 1 | 19 | 123 | 50 | 155 | 4.65e-49 | 162 |
MS.gene018155.t1 | AT3G58190 | 50.314 | 159 | 68 | 3 | 20 | 178 | 11 | 158 | 2.00e-48 | 159 |
MS.gene018155.t1 | AT2G42430 | 60.504 | 119 | 44 | 1 | 3 | 121 | 1 | 116 | 1.97e-47 | 157 |
MS.gene018155.t1 | AT2G42440 | 60.000 | 115 | 46 | 0 | 17 | 131 | 4 | 118 | 6.95e-46 | 153 |
MS.gene018155.t1 | AT5G06080 | 53.676 | 136 | 55 | 1 | 15 | 142 | 2 | 137 | 6.98e-46 | 151 |
MS.gene018155.t1 | AT2G31310 | 63.810 | 105 | 38 | 0 | 15 | 119 | 2 | 106 | 1.38e-43 | 145 |
MS.gene018155.t1 | AT5G63090 | 56.250 | 112 | 48 | 1 | 16 | 127 | 7 | 117 | 5.39e-37 | 128 |
MS.gene018155.t1 | AT5G63090 | 56.250 | 112 | 48 | 1 | 16 | 127 | 7 | 117 | 5.39e-37 | 128 |
MS.gene018155.t1 | AT5G63090 | 56.250 | 112 | 48 | 1 | 16 | 127 | 7 | 117 | 5.39e-37 | 128 |
MS.gene018155.t1 | AT5G63090 | 56.250 | 112 | 48 | 1 | 16 | 127 | 7 | 117 | 5.39e-37 | 128 |
MS.gene018155.t1 | AT2G30340 | 61.165 | 103 | 39 | 1 | 19 | 121 | 51 | 152 | 5.72e-37 | 131 |
MS.gene018155.t1 | AT2G30340 | 61.165 | 103 | 39 | 1 | 19 | 121 | 52 | 153 | 6.18e-37 | 130 |
MS.gene018155.t1 | AT3G27650 | 60.606 | 99 | 38 | 1 | 17 | 115 | 36 | 133 | 8.41e-37 | 127 |
MS.gene018155.t1 | AT2G30130 | 52.066 | 121 | 53 | 2 | 14 | 132 | 2 | 119 | 1.55e-36 | 127 |
MS.gene018155.t1 | AT3G11090 | 42.604 | 169 | 81 | 6 | 12 | 173 | 3 | 162 | 1.19e-34 | 122 |
MS.gene018155.t1 | AT1G16530 | 45.070 | 142 | 75 | 3 | 10 | 149 | 4 | 144 | 4.58e-34 | 120 |
MS.gene018155.t1 | AT5G66870 | 58.416 | 101 | 41 | 1 | 15 | 115 | 2 | 101 | 1.52e-33 | 123 |
MS.gene018155.t1 | AT2G40470 | 64.078 | 103 | 36 | 1 | 19 | 121 | 19 | 120 | 2.72e-33 | 119 |
MS.gene018155.t1 | AT2G40470 | 64.078 | 103 | 36 | 1 | 19 | 121 | 44 | 145 | 3.70e-33 | 120 |
MS.gene018155.t1 | AT1G31320 | 57.143 | 91 | 38 | 1 | 17 | 107 | 10 | 99 | 2.67e-32 | 116 |
MS.gene018155.t1 | AT1G07900 | 51.456 | 103 | 49 | 1 | 19 | 121 | 32 | 133 | 5.93e-32 | 115 |
MS.gene018155.t1 | AT2G23660 | 56.250 | 96 | 41 | 1 | 19 | 114 | 4 | 98 | 3.29e-31 | 117 |
MS.gene018155.t1 | AT2G23660 | 56.250 | 96 | 41 | 1 | 19 | 114 | 4 | 98 | 3.29e-31 | 117 |
MS.gene018155.t1 | AT2G23660 | 56.250 | 96 | 41 | 1 | 19 | 114 | 4 | 98 | 3.29e-31 | 117 |
MS.gene018155.t1 | AT2G28500 | 51.456 | 103 | 49 | 1 | 19 | 121 | 54 | 155 | 5.38e-31 | 114 |
MS.gene018155.t1 | AT3G26660 | 48.515 | 101 | 51 | 1 | 21 | 121 | 6 | 105 | 7.71e-30 | 108 |
MS.gene018155.t1 | AT3G26620 | 48.515 | 101 | 51 | 1 | 21 | 121 | 6 | 105 | 1.47e-29 | 107 |
MS.gene018155.t1 | AT1G65620 | 64.706 | 85 | 29 | 1 | 16 | 100 | 5 | 88 | 2.06e-29 | 109 |
MS.gene018155.t1 | AT1G65620 | 64.706 | 85 | 29 | 1 | 16 | 100 | 5 | 88 | 2.06e-29 | 109 |
MS.gene018155.t1 | AT1G65620 | 64.706 | 85 | 29 | 1 | 16 | 100 | 5 | 88 | 2.06e-29 | 109 |
MS.gene018155.t1 | AT1G65620 | 64.706 | 85 | 29 | 1 | 16 | 100 | 5 | 88 | 2.06e-29 | 109 |
MS.gene018155.t1 | AT1G65620 | 64.706 | 85 | 29 | 1 | 16 | 100 | 5 | 88 | 2.06e-29 | 109 |
MS.gene018155.t1 | AT3G50510 | 41.880 | 117 | 65 | 2 | 19 | 135 | 11 | 124 | 2.94e-24 | 96.3 |
MS.gene018155.t1 | AT3G50510 | 41.880 | 117 | 65 | 2 | 19 | 135 | 11 | 124 | 2.94e-24 | 96.3 |
MS.gene018155.t1 | AT5G35900 | 36.634 | 101 | 63 | 1 | 21 | 121 | 6 | 105 | 7.60e-19 | 82.0 |
MS.gene018155.t1 | AT1G72980 | 37.963 | 108 | 66 | 1 | 15 | 122 | 8 | 114 | 2.25e-18 | 80.9 |
MS.gene018155.t1 | AT3G47870 | 34.259 | 108 | 69 | 2 | 14 | 121 | 31 | 136 | 2.25e-16 | 77.4 |
MS.gene018155.t1 | AT3G13850 | 35.789 | 95 | 60 | 1 | 21 | 115 | 37 | 130 | 4.73e-16 | 75.5 |
MS.gene018155.t1 | AT1G06280 | 42.308 | 78 | 44 | 1 | 21 | 98 | 25 | 101 | 1.02e-14 | 70.9 |
Find 82 sgRNAs with CRISPR-Local
Find 220 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GACTGATCATTTAGAAAATT+TGG | 0.109915 | 7.1:-28070925 | None:intergenic |
CAGCTGTGCACAAAGTGTTT+GGG | 0.287134 | 7.1:+28067900 | MS.gene018155:CDS |
GACCTTACTCATAGACAAAT+TGG | 0.304306 | 7.1:+28070855 | MS.gene018155:CDS |
ATGAATTAATGTGGCTTTGT+AGG | 0.317324 | 7.1:-28070578 | None:intergenic |
GCAGCTGTGCACAAAGTGTT+TGG | 0.322262 | 7.1:+28067899 | MS.gene018155:CDS |
AATGTATCCAAACTCCTTCT+TGG | 0.335322 | 7.1:+28067929 | MS.gene018155:CDS |
CAAAGCCACATTAATTCATC+TGG | 0.345174 | 7.1:+28070582 | MS.gene018155:CDS |
TCCCAGCGGTGGTTGATGTT+GGG | 0.361607 | 7.1:-28070815 | None:intergenic |
GTGGTGGAAGAGGTGGCTGT+TGG | 0.375304 | 7.1:-28070611 | None:intergenic |
TGGTGGAAGAGGTGGCTGTT+GGG | 0.391554 | 7.1:-28070610 | None:intergenic |
CCATGCTCTGAATCAAAGTA+TGG | 0.400865 | 7.1:-28067863 | None:intergenic |
GTTGCGGTCGCCTGTGGTGG+TGG | 0.404108 | 7.1:-28070627 | None:intergenic |
TATCGTTGCCCTTCAGCAAC+AGG | 0.412537 | 7.1:+28068045 | MS.gene018155:CDS |
TGGAATGCCAAGAAGGAGTT+TGG | 0.416293 | 7.1:-28067936 | None:intergenic |
AGCGGAAGCGGTGGTGGCGG+CGG | 0.416797 | 7.1:+28067770 | MS.gene018155:CDS |
GGCATGGTTGTGGCGGTGGT+TGG | 0.418748 | 7.1:-28070681 | None:intergenic |
GACCGGCATGGTTGTGGCGG+TGG | 0.423968 | 7.1:-28070685 | None:intergenic |
ATGGTTGTGGCGGTGGTTGG+TGG | 0.442641 | 7.1:-28070678 | None:intergenic |
GCTTTGTAGGTAGGAGAGTT+CGG | 0.446439 | 7.1:-28070565 | None:intergenic |
AACTCTAGTGGCAGCGGAAG+CGG | 0.447701 | 7.1:+28067758 | MS.gene018155:CDS |
GAAGCAGTGGAAGCCCTTGT+GGG | 0.450034 | 7.1:+28067792 | MS.gene018155:CDS |
GGCAGCGGAAGCGGTGGTGG+CGG | 0.454451 | 7.1:+28067767 | MS.gene018155:CDS |
GTCGCCTGTGGTGGTGGAAG+AGG | 0.460451 | 7.1:-28070621 | None:intergenic |
AGTGGCAGCGGAAGCGGTGG+TGG | 0.464681 | 7.1:+28067764 | MS.gene018155:CDS |
AGGTTGAGAGATCCTATCTA+TGG | 0.467327 | 7.1:+28068010 | MS.gene018155:CDS |
ATAGGTGACCGGCATGGTTG+TGG | 0.472293 | 7.1:-28070691 | None:intergenic |
GGAGAAGACTGTCGGGGTTG+CGG | 0.480167 | 7.1:-28070643 | None:intergenic |
TGACCAACACAACCATAGAT+AGG | 0.484451 | 7.1:-28068022 | None:intergenic |
GTATTGACGTGGATCAATAC+TGG | 0.487488 | 7.1:-28070775 | None:intergenic |
ATCCCAGCGGTGGTTGATGT+TGG | 0.489865 | 7.1:-28070816 | None:intergenic |
CAGCAAAGGAGAAGACTGTC+GGG | 0.491998 | 7.1:-28070650 | None:intergenic |
CGAAGCAGATGATGAGGCAT+TGG | 0.499845 | 7.1:-28070898 | None:intergenic |
ATTAATGTGGCTTTGTAGGT+AGG | 0.501625 | 7.1:-28070574 | None:intergenic |
AGCCAATTTGTCTATGAGTA+AGG | 0.502031 | 7.1:-28070857 | None:intergenic |
AATAAGTTACCTGTTGCTGA+AGG | 0.502270 | 7.1:-28068054 | None:intergenic |
GCCCCAACATCAACCACCGC+TGG | 0.504868 | 7.1:+28070813 | MS.gene018155:CDS |
AGCAGATGATGAGGCATTGG+AGG | 0.508438 | 7.1:-28070895 | None:intergenic |
GCCTGTGGTGGTGGAAGAGG+TGG | 0.510393 | 7.1:-28070618 | None:intergenic |
TTTGCTATGAAGCTCAATCA+AGG | 0.514259 | 7.1:+28067990 | MS.gene018155:CDS |
GCATCAAGCCTCCTACTAGC+TGG | 0.514810 | 7.1:-28067956 | None:intergenic |
TTGAGGAGGAAGTGTGTGCA+AGG | 0.518714 | 7.1:+28067827 | MS.gene018155:CDS |
GCCACCTCTTCCACCACCAC+AGG | 0.519568 | 7.1:+28070617 | MS.gene018155:CDS |
GAAAAGAGTAGACATATCAT+AGG | 0.520665 | 7.1:-28070709 | None:intergenic |
GTCGGGGTTGCGGTCGCCTG+TGG | 0.527823 | 7.1:-28070633 | None:intergenic |
CCCAGCGGTGGTTGATGTTG+GGG | 0.527927 | 7.1:-28070814 | None:intergenic |
GGGGTTGCGGTCGCCTGTGG+TGG | 0.530759 | 7.1:-28070630 | None:intergenic |
GGAAGCAGTGGAAGCCCTTG+TGG | 0.533857 | 7.1:+28067791 | MS.gene018155:CDS |
TTGTGGCGGTGGTTGGTGGT+AGG | 0.536782 | 7.1:-28070674 | None:intergenic |
TTGGCATTCCAGCTAGTAGG+AGG | 0.542403 | 7.1:+28067948 | MS.gene018155:CDS |
TTCTTGGCATTCCAGCTAGT+AGG | 0.545620 | 7.1:+28067945 | MS.gene018155:CDS |
TACTAGCTGGAATGCCAAGA+AGG | 0.545685 | 7.1:-28067943 | None:intergenic |
CCATACTTTGATTCAGAGCA+TGG | 0.551259 | 7.1:+28067863 | MS.gene018155:CDS |
TGTTGTTGCATGGACAATGA+AGG | 0.552755 | 7.1:-28070747 | None:intergenic |
CCCCAACATCAACCACCGCT+GGG | 0.555064 | 7.1:+28070814 | MS.gene018155:CDS |
GATCCTATCTATGGTTGTGT+TGG | 0.563587 | 7.1:+28068019 | MS.gene018155:CDS |
TCTAGTGGCAGCGGAAGCGG+TGG | 0.570616 | 7.1:+28067761 | MS.gene018155:CDS |
AACCACCGCCACAACCATGC+CGG | 0.571081 | 7.1:+28070683 | MS.gene018155:CDS |
GATGATGAGGCATTGGAGGA+TGG | 0.581068 | 7.1:-28070891 | None:intergenic |
AGTCTAAACTCTAGTGGCAG+CGG | 0.581990 | 7.1:+28067752 | MS.gene018155:CDS |
ATAAGTTACCTGTTGCTGAA+GGG | 0.587056 | 7.1:-28068053 | None:intergenic |
TCAGCAAAGGAGAAGACTGT+CGG | 0.589136 | 7.1:-28070651 | None:intergenic |
GGTGGTGGCGGCGGAAGCAG+TGG | 0.590585 | 7.1:+28067779 | MS.gene018155:CDS |
AAAGCCACATTAATTCATCT+GGG | 0.592763 | 7.1:+28070583 | MS.gene018155:CDS |
ACTGGTCCTCTGTTGTTGCA+TGG | 0.593499 | 7.1:-28070757 | None:intergenic |
AAGCAGTGGAAGCCCTTGTG+GGG | 0.605091 | 7.1:+28067793 | MS.gene018155:CDS |
GGTGACCGGCATGGTTGTGG+CGG | 0.607116 | 7.1:-28070688 | None:intergenic |
CACCGCTGGGATTCAATCAG+TGG | 0.607722 | 7.1:+28070827 | MS.gene018155:CDS |
GAGATGAGTCTAAACTCTAG+TGG | 0.611359 | 7.1:+28067746 | None:intergenic |
TGAGGAGGAAGTGTGTGCAA+GGG | 0.614125 | 7.1:+28067828 | MS.gene018155:CDS |
AGCTGTGCACAAAGTGTTTG+GGG | 0.615090 | 7.1:+28067901 | MS.gene018155:CDS |
GTAGACATATCATAGGTGAC+CGG | 0.617117 | 7.1:-28070702 | None:intergenic |
GGAAAACGAAGCAGATGATG+AGG | 0.632780 | 7.1:-28070904 | None:intergenic |
GGTTGGTGGTAGGTCAGCAA+AGG | 0.635825 | 7.1:-28070664 | None:intergenic |
GTTGCATGGACAATGAAGGT+TGG | 0.636824 | 7.1:-28070743 | None:intergenic |
AAAACTTGCAAGCCCCACAA+GGG | 0.669022 | 7.1:-28067805 | None:intergenic |
TTAGCCCAGATGAATTAATG+TGG | 0.674018 | 7.1:-28070587 | None:intergenic |
CACTGATTGAATCCCAGCGG+TGG | 0.680808 | 7.1:-28070826 | None:intergenic |
CATATCATAGGTGACCGGCA+TGG | 0.691704 | 7.1:-28070697 | None:intergenic |
CATTGTCCATGCAACAACAG+AGG | 0.694061 | 7.1:+28070751 | MS.gene018155:CDS |
TGAGCAGCTAAGTATTGACG+TGG | 0.699058 | 7.1:-28070786 | None:intergenic |
TGCCACTGATTGAATCCCAG+CGG | 0.713863 | 7.1:-28070829 | None:intergenic |
AGCAAAGGAGAAGACTGTCG+GGG | 0.715793 | 7.1:-28070649 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAACAAAACAAAATAAATT+TGG | - | chr7.1:28068441-28068460 | None:intergenic | 10.0% |
!! | AAACAAAACAAAATAAATTT+GGG | - | chr7.1:28068440-28068459 | None:intergenic | 10.0% |
!! | AATTTATATAATTTCACAAA+AGG | - | chr7.1:28069126-28069145 | None:intergenic | 10.0% |
!! | TTAATCAATTAAAAGATTTA+TGG | - | chr7.1:28068947-28068966 | None:intergenic | 10.0% |
!! | GAAGAGTTTATAAAATAATT+TGG | - | chr7.1:28069667-28069686 | None:intergenic | 15.0% |
!! | GATAAATTATTTCAATGATA+GGG | + | chr7.1:28069493-28069512 | MS.gene018155:intron | 15.0% |
!!! | AATAACTGAAGTTTTTTTTT+TGG | + | chr7.1:28070508-28070527 | MS.gene018155:intron | 15.0% |
!!! | ATAACTGAAGTTTTTTTTTT+GGG | + | chr7.1:28070509-28070528 | MS.gene018155:intron | 15.0% |
!!! | TTTTTTTATAAGTAACTCAA+TGG | + | chr7.1:28069690-28069709 | MS.gene018155:intron | 15.0% |
!! | ACAGGTAACTTATTAATTAA+TGG | + | chr7.1:28068063-28068082 | MS.gene018155:intron | 20.0% |
!! | ATATAATTTCACAAAAGGAT+AGG | - | chr7.1:28069121-28069140 | None:intergenic | 20.0% |
!! | ATTGATTAACAAATGATATG+TGG | + | chr7.1:28068958-28068977 | MS.gene018155:intron | 20.0% |
!! | CAACTTTGTCTAAATTAAAT+AGG | - | chr7.1:28068377-28068396 | None:intergenic | 20.0% |
!! | CGATAAATTATTTCAATGAT+AGG | + | chr7.1:28069492-28069511 | MS.gene018155:intron | 20.0% |
!! | CTTATAAATGAAGCTATATA+AGG | + | chr7.1:28068628-28068647 | MS.gene018155:intron | 20.0% |
!! | GGAATCTATGATTTAAATTA+TGG | + | chr7.1:28069726-28069745 | MS.gene018155:intron | 20.0% |
!! | TAAGACTTAATGATAGATAA+TGG | - | chr7.1:28069426-28069445 | None:intergenic | 20.0% |
!! | TATAATTTCACAAAAGGATA+GGG | - | chr7.1:28069120-28069139 | None:intergenic | 20.0% |
!!! | GCATTTTCTTTTGAATAATA+TGG | + | chr7.1:28069293-28069312 | MS.gene018155:intron | 20.0% |
!!! | TAAATTCCATTTTCACTTAT+TGG | - | chr7.1:28068468-28068487 | None:intergenic | 20.0% |
!!! | TAACTGAAGTTTTTTTTTTG+GGG | + | chr7.1:28070510-28070529 | MS.gene018155:intron | 20.0% |
! | AAGAAAATGCCAAAAAATTG+AGG | - | chr7.1:28069283-28069302 | None:intergenic | 25.0% |
! | AATGAAGCTATATAAGGATA+TGG | + | chr7.1:28068634-28068653 | MS.gene018155:intron | 25.0% |
! | AATGTGAACATAAGAAAATG+AGG | - | chr7.1:28068493-28068512 | None:intergenic | 25.0% |
! | ACTTAAAGCAAGAAGATAAA+TGG | + | chr7.1:28069609-28069628 | MS.gene018155:intron | 25.0% |
! | AGAAAATGCCAAAAAATTGA+GGG | - | chr7.1:28069282-28069301 | None:intergenic | 25.0% |
! | ATAAACATGATTAAGCTTGA+AGG | - | chr7.1:28070173-28070192 | None:intergenic | 25.0% |
! | ATGTGAACATAAGAAAATGA+GGG | - | chr7.1:28068492-28068511 | None:intergenic | 25.0% |
! | ATTAACAAATGATATGTGGT+CGG | + | chr7.1:28068962-28068981 | MS.gene018155:intron | 25.0% |
! | CAAAACAAAATAAATTTGGG+AGG | - | chr7.1:28068437-28068456 | None:intergenic | 25.0% |
! | CAATATAGATACTAGTATAC+AGG | - | chr7.1:28070042-28070061 | None:intergenic | 25.0% |
! | GAGTGAAATTATTTGTATCA+AGG | - | chr7.1:28069150-28069169 | None:intergenic | 25.0% |
! | TAAACATGATTAAGCTTGAA+GGG | - | chr7.1:28070172-28070191 | None:intergenic | 25.0% |
! | TAACAACCTCCATAAAATAT+GGG | + | chr7.1:28069248-28069267 | MS.gene018155:intron | 25.0% |
! | TAGATTTCACTTGAGAAAAA+TGG | - | chr7.1:28069547-28069566 | None:intergenic | 25.0% |
! | TAGTCGTTAGATTAATCTAA+CGG | + | chr7.1:28069444-28069463 | MS.gene018155:intron | 25.0% |
! | TATAAGTCCAAATATCTAAG+TGG | - | chr7.1:28069640-28069659 | None:intergenic | 25.0% |
! | TTAACAACCTCCATAAAATA+TGG | + | chr7.1:28069247-28069266 | MS.gene018155:intron | 25.0% |
!! | GACTTTTAACCCATATTTTA+TGG | - | chr7.1:28069260-28069279 | None:intergenic | 25.0% |
!! | TTTTAACCCATATTTTATGG+AGG | - | chr7.1:28069257-28069276 | None:intergenic | 25.0% |
!! | TTTTAGCCAATAAGTGAAAA+TGG | + | chr7.1:28068459-28068478 | MS.gene018155:intron | 25.0% |
!!! | AAAAGTGAGTTTTGTTTTTG+AGG | - | chr7.1:28069879-28069898 | None:intergenic | 25.0% |
!!! | AACTGAAGTTTTTTTTTTGG+GGG | + | chr7.1:28070511-28070530 | MS.gene018155:intron | 25.0% |
!!! | ACTTAATGATAGATAATGGA+GGG | - | chr7.1:28069422-28069441 | None:intergenic | 25.0% |
!!! | CTTATAAGGAATTTTGAAAG+TGG | + | chr7.1:28068310-28068329 | MS.gene018155:intron | 25.0% |
!!! | TTAAAAGTCCCTCAATTTTT+TGG | + | chr7.1:28069271-28069290 | MS.gene018155:intron | 25.0% |
AAAATTGCTTAACCGAACTA+TGG | - | chr7.1:28069063-28069082 | None:intergenic | 30.0% | |
AAAGCCACATTAATTCATCT+GGG | + | chr7.1:28070583-28070602 | MS.gene018155:CDS | 30.0% | |
AAGAGGAAAACAAAAAAGGT+AGG | + | chr7.1:28068848-28068867 | MS.gene018155:intron | 30.0% | |
AATACAACAAAGTAGCATCA+TGG | + | chr7.1:28070451-28070470 | MS.gene018155:intron | 30.0% | |
ACCTAATGACTAGAAACAAA+TGG | - | chr7.1:28069938-28069957 | None:intergenic | 30.0% | |
AGAGGAAAACAAAAAAGGTA+GGG | + | chr7.1:28068849-28068868 | MS.gene018155:intron | 30.0% | |
AGATTAATCTAACGGCTATA+AGG | + | chr7.1:28069452-28069471 | MS.gene018155:intron | 30.0% | |
ATAATCCCCATGCTTAAAAT+AGG | + | chr7.1:28070088-28070107 | MS.gene018155:intron | 30.0% | |
ATGGAAGTAACTAAAGAAGA+GGG | + | chr7.1:28068890-28068909 | MS.gene018155:intron | 30.0% | |
CACTACTACAATGTATGTAA+AGG | - | chr7.1:28068785-28068804 | None:intergenic | 30.0% | |
CCTAATGACTAGAAACAAAT+GGG | - | chr7.1:28069937-28069956 | None:intergenic | 30.0% | |
CTTGAGTCAAGAAAAAAAAG+AGG | - | chr7.1:28068277-28068296 | None:intergenic | 30.0% | |
GAAAAGAGTAGACATATCAT+AGG | - | chr7.1:28070712-28070731 | None:intergenic | 30.0% | |
GAACTTCACTCAGTAAAAAA+AGG | - | chr7.1:28069909-28069928 | None:intergenic | 30.0% | |
GGGAATTGAATTCTCTTTAT+TGG | + | chr7.1:28069513-28069532 | MS.gene018155:intron | 30.0% | |
GTGTTAAATGAGATCATATG+TGG | - | chr7.1:28068415-28068434 | None:intergenic | 30.0% | |
TAGCTTCATTTATAAGCTCT+AGG | - | chr7.1:28068624-28068643 | None:intergenic | 30.0% | |
TCCTTATTCTCAAATTAGCT+CGG | + | chr7.1:28070322-28070341 | MS.gene018155:intron | 30.0% | |
! | GAATCAAGATGAAGTTTGTT+TGG | + | chr7.1:28068134-28068153 | MS.gene018155:intron | 30.0% |
! | GACTTAATGATAGATAATGG+AGG | - | chr7.1:28069423-28069442 | None:intergenic | 30.0% |
! | GGTTTTTCCACTTAGATATT+TGG | + | chr7.1:28069630-28069649 | MS.gene018155:intron | 30.0% |
!! | ACATTGACCTATTTTAAGCA+TGG | - | chr7.1:28070098-28070117 | None:intergenic | 30.0% |
!! | ATGAATTAATGTGGCTTTGT+AGG | - | chr7.1:28070581-28070600 | None:intergenic | 30.0% |
!! | ATTGACCTATTTTAAGCATG+GGG | - | chr7.1:28070096-28070115 | None:intergenic | 30.0% |
!! | CATTGACCTATTTTAAGCAT+GGG | - | chr7.1:28070097-28070116 | None:intergenic | 30.0% |
!! | CTTAATGATAGATAATGGAG+GGG | - | chr7.1:28069421-28069440 | None:intergenic | 30.0% |
!! | TTCGGTTAAGCAATTTTGAT+TGG | + | chr7.1:28069066-28069085 | MS.gene018155:intron | 30.0% |
!!! | ACTGAAGTTTTTTTTTTGGG+GGG | + | chr7.1:28070512-28070531 | MS.gene018155:intron | 30.0% |
!!! | TCGGTTAAGCAATTTTGATT+GGG | + | chr7.1:28069067-28069086 | MS.gene018155:intron | 30.0% |
AATAAGTTACCTGTTGCTGA+AGG | - | chr7.1:28068057-28068076 | None:intergenic | 35.0% | |
AATGTATCCAAACTCCTTCT+TGG | + | chr7.1:28067929-28067948 | MS.gene018155:CDS | 35.0% | |
AGAAACAAAAGGAAGGTTTG+GGG | + | chr7.1:28068824-28068843 | MS.gene018155:intron | 35.0% | |
AGAGAAACAAAAGGAAGGTT+TGG | + | chr7.1:28068822-28068841 | MS.gene018155:intron | 35.0% | |
AGCCAATTTGTCTATGAGTA+AGG | - | chr7.1:28070860-28070879 | None:intergenic | 35.0% | |
ATAAGTTACCTGTTGCTGAA+GGG | - | chr7.1:28068056-28068075 | None:intergenic | 35.0% | |
ATTCTCGAAGTCTAAGAGAA+TGG | - | chr7.1:28069183-28069202 | None:intergenic | 35.0% | |
CAAAGCCACATTAATTCATC+TGG | + | chr7.1:28070582-28070601 | MS.gene018155:CDS | 35.0% | |
CATGGAAGTAACTAAAGAAG+AGG | + | chr7.1:28068889-28068908 | MS.gene018155:intron | 35.0% | |
CCAAAAGAGAAACAAAAGGA+AGG | + | chr7.1:28068817-28068836 | MS.gene018155:intron | 35.0% | |
CCATCCAAAAGAGAAACAAA+AGG | + | chr7.1:28068813-28068832 | MS.gene018155:intron | 35.0% | |
CCTTATTCTCAAATTAGCTC+GGG | + | chr7.1:28070323-28070342 | MS.gene018155:intron | 35.0% | |
CTCTTCTTTAGTTACTTCCA+TGG | - | chr7.1:28068891-28068910 | None:intergenic | 35.0% | |
CTTATTCTCAAATTAGCTCG+GGG | + | chr7.1:28070324-28070343 | MS.gene018155:intron | 35.0% | |
CTTTGTTGAAGGAATGTTGA+GGG | - | chr7.1:28068762-28068781 | None:intergenic | 35.0% | |
GAATCAAGCTGCATCTTATA+AGG | + | chr7.1:28068296-28068315 | MS.gene018155:intron | 35.0% | |
GACCTTACTCATAGACAAAT+TGG | + | chr7.1:28070855-28070874 | MS.gene018155:CDS | 35.0% | |
GAGAAACAAAAGGAAGGTTT+GGG | + | chr7.1:28068823-28068842 | MS.gene018155:intron | 35.0% | |
GGGAAAGAGGAAAACAAAAA+AGG | + | chr7.1:28068844-28068863 | MS.gene018155:intron | 35.0% | |
TACAAACAAAGTCTCTAGCT+TGG | - | chr7.1:28070209-28070228 | None:intergenic | 35.0% | |
TATATGTGAGACTTACCTCA+CGG | - | chr7.1:28069212-28069231 | None:intergenic | 35.0% | |
TGTCAATATTCTTGCATCCT+AGG | + | chr7.1:28070289-28070308 | MS.gene018155:intron | 35.0% | |
TTAGCCCAGATGAATTAATG+TGG | - | chr7.1:28070590-28070609 | None:intergenic | 35.0% | |
TTTGTGAAGATTGCTGATCT+TGG | + | chr7.1:28070137-28070156 | MS.gene018155:intron | 35.0% | |
! | ACAAACAAAGTCTCTAGCTT+GGG | - | chr7.1:28070208-28070227 | None:intergenic | 35.0% |
! | ATCAATCGAGTTGCACTTAT+AGG | + | chr7.1:28069753-28069772 | MS.gene018155:intron | 35.0% |
! | ATTGTGAAGTGACTCTCTTT+TGG | + | chr7.1:28069369-28069388 | MS.gene018155:intron | 35.0% |
! | TCAATCGAGTTGCACTTATA+GGG | + | chr7.1:28069754-28069773 | MS.gene018155:intron | 35.0% |
! | TCTACTCTTTTCGACTCAAT+GGG | + | chr7.1:28070720-28070739 | MS.gene018155:CDS | 35.0% |
! | TTGTGAAGTGACTCTCTTTT+GGG | + | chr7.1:28069370-28069389 | MS.gene018155:intron | 35.0% |
! | TTTGCTATGAAGCTCAATCA+AGG | + | chr7.1:28067990-28068009 | MS.gene018155:CDS | 35.0% |
!! | ATTAATGTGGCTTTGTAGGT+AGG | - | chr7.1:28070577-28070596 | None:intergenic | 35.0% |
!! | CCCATTTGTTTCTAGTCATT+AGG | + | chr7.1:28069934-28069953 | MS.gene018155:intron | 35.0% |
!! | CCTTCCTTTTGTTTCTCTTT+TGG | - | chr7.1:28068820-28068839 | None:intergenic | 35.0% |
!! | CCTTTTGTTTCTCTTTTGGA+TGG | - | chr7.1:28068816-28068835 | None:intergenic | 35.0% |
!! | GTATGTAAAGGCTTTGTTGA+AGG | - | chr7.1:28068773-28068792 | None:intergenic | 35.0% |
!! | TCTTTTGGGTAGGAAACATT+TGG | + | chr7.1:28069384-28069403 | MS.gene018155:intron | 35.0% |
!!! | CTTGGTTCATGCTGTTTTTA+GGG | + | chr7.1:28069021-28069040 | MS.gene018155:intron | 35.0% |
AACTCAATGGCTATGAGAAG+TGG | + | chr7.1:28069703-28069722 | MS.gene018155:intron | 40.0% | |
ACTCAATGGCTATGAGAAGT+GGG | + | chr7.1:28069704-28069723 | MS.gene018155:intron | 40.0% | |
AGGTTGAGAGATCCTATCTA+TGG | + | chr7.1:28068010-28068029 | MS.gene018155:CDS | 40.0% | |
ATGAACCAAGGACTTTGTGT+AGG | - | chr7.1:28069011-28069030 | None:intergenic | 40.0% | |
CAACCAGGTGAATCATAAGT+TGG | + | chr7.1:28068234-28068253 | MS.gene018155:intron | 40.0% | |
CAACTTATGATTCACCTGGT+TGG | - | chr7.1:28068236-28068255 | None:intergenic | 40.0% | |
CAATATTCTTGCATCCTAGG+TGG | + | chr7.1:28070292-28070311 | MS.gene018155:intron | 40.0% | |
CCATACTTTGATTCAGAGCA+TGG | + | chr7.1:28067863-28067882 | MS.gene018155:CDS | 40.0% | |
CCCGAGCTAATTTGAGAATA+AGG | - | chr7.1:28070326-28070345 | None:intergenic | 40.0% | |
CCTAAAAACAGCATGAACCA+AGG | - | chr7.1:28069023-28069042 | None:intergenic | 40.0% | |
CGGTTGTTACGTACTCAAAT+GGG | + | chr7.1:28068982-28069001 | MS.gene018155:intron | 40.0% | |
CTGGTTGGCAAAGTAGTTTA+GGG | - | chr7.1:28068221-28068240 | None:intergenic | 40.0% | |
GATCCTATCTATGGTTGTGT+TGG | + | chr7.1:28068019-28068038 | MS.gene018155:CDS | 40.0% | |
GTAGACATATCATAGGTGAC+CGG | - | chr7.1:28070705-28070724 | None:intergenic | 40.0% | |
TCGGTTGTTACGTACTCAAA+TGG | + | chr7.1:28068981-28069000 | MS.gene018155:intron | 40.0% | |
TGACCAACACAACCATAGAT+AGG | - | chr7.1:28068025-28068044 | None:intergenic | 40.0% | |
TGACCAACTTATGATTCACC+TGG | - | chr7.1:28068240-28068259 | None:intergenic | 40.0% | |
TGGCAAAGTAGTTTAGGGAA+AGG | - | chr7.1:28068216-28068235 | None:intergenic | 40.0% | |
TGTTGTTGCATGGACAATGA+AGG | - | chr7.1:28070750-28070769 | None:intergenic | 40.0% | |
! | CCATGCTCTGAATCAAAGTA+TGG | - | chr7.1:28067866-28067885 | None:intergenic | 40.0% |
! | GCTTTGTTGAAGGAATGTTG+AGG | - | chr7.1:28068763-28068782 | None:intergenic | 40.0% |
! | GTATTGACGTGGATCAATAC+TGG | - | chr7.1:28070778-28070797 | None:intergenic | 40.0% |
! | GTCTACTCTTTTCGACTCAA+TGG | + | chr7.1:28070719-28070738 | MS.gene018155:CDS | 40.0% |
!!! | CCTTGGTTCATGCTGTTTTT+AGG | + | chr7.1:28069020-28069039 | MS.gene018155:intron | 40.0% |
!!! | TCATGCTGTTTTTAGGGAGA+TGG | + | chr7.1:28069027-28069046 | MS.gene018155:intron | 40.0% |
AAAAACTTGCAAGCCCCACA+AGG | - | chr7.1:28067809-28067828 | None:intergenic | 45.0% | |
AAAACTTGCAAGCCCCACAA+GGG | - | chr7.1:28067808-28067827 | None:intergenic | 45.0% | |
AAAGGAAGGTTTGGGGAAAG+AGG | + | chr7.1:28068831-28068850 | MS.gene018155:intron | 45.0% | |
ACTTCCATGGCTTCGCAAAT+GGG | - | chr7.1:28068878-28068897 | None:intergenic | 45.0% | |
AGTCTAAACTCTAGTGGCAG+CGG | + | chr7.1:28067752-28067771 | MS.gene018155:CDS | 45.0% | |
CATTGTCCATGCAACAACAG+AGG | + | chr7.1:28070751-28070770 | MS.gene018155:CDS | 45.0% | |
CCTAAACTACTTTGCCAACC+AGG | + | chr7.1:28068219-28068238 | MS.gene018155:intron | 45.0% | |
CCTGGTTGGCAAAGTAGTTT+AGG | - | chr7.1:28068222-28068241 | None:intergenic | 45.0% | |
CTCAATGGCTATGAGAAGTG+GGG | + | chr7.1:28069705-28069724 | MS.gene018155:intron | 45.0% | |
GCTTGTAAACTCATCACCTG+TGG | - | chr7.1:28070546-28070565 | None:intergenic | 45.0% | |
GCTTTGTAGGTAGGAGAGTT+CGG | - | chr7.1:28070568-28070587 | None:intergenic | 45.0% | |
GGAAAACGAAGCAGATGATG+AGG | - | chr7.1:28070907-28070926 | None:intergenic | 45.0% | |
GGTCGGTAGTTTCCATAGTT+CGG | + | chr7.1:28069048-28069067 | MS.gene018155:intron | 45.0% | |
GTTGCATGGACAATGAAGGT+TGG | - | chr7.1:28070746-28070765 | None:intergenic | 45.0% | |
TACTAGCTGGAATGCCAAGA+AGG | - | chr7.1:28067946-28067965 | None:intergenic | 45.0% | |
TACTTCCATGGCTTCGCAAA+TGG | - | chr7.1:28068879-28068898 | None:intergenic | 45.0% | |
TCAGCAAAGGAGAAGACTGT+CGG | - | chr7.1:28070654-28070673 | None:intergenic | 45.0% | |
TGGAATGCCAAGAAGGAGTT+TGG | - | chr7.1:28067939-28067958 | None:intergenic | 45.0% | |
TTCGAGAATGTGTAACCGTG+AGG | + | chr7.1:28069194-28069213 | MS.gene018155:intron | 45.0% | |
TTCTTGGCATTCCAGCTAGT+AGG | + | chr7.1:28067945-28067964 | MS.gene018155:CDS | 45.0% | |
! | AGCTGTGCACAAAGTGTTTG+GGG | + | chr7.1:28067901-28067920 | MS.gene018155:CDS | 45.0% |
! | CAGCTGTGCACAAAGTGTTT+GGG | + | chr7.1:28067900-28067919 | MS.gene018155:CDS | 45.0% |
!! | GAAGTGACTCTCTTTTGGGT+AGG | + | chr7.1:28069374-28069393 | MS.gene018155:intron | 45.0% |
!! | TGAGCAGCTAAGTATTGACG+TGG | - | chr7.1:28070789-28070808 | None:intergenic | 45.0% |
!!! | GCTGTTTTTAGGGAGATGGT+CGG | + | chr7.1:28069031-28069050 | MS.gene018155:intron | 45.0% |
!!! | AGAAAATTATTTATTTTTTA+AGG | - | chr7.1:28068709-28068728 | None:intergenic | 5.0% |
ACTGGTCCTCTGTTGTTGCA+TGG | - | chr7.1:28070760-28070779 | None:intergenic | 50.0% | |
AGCAAAGGAGAAGACTGTCG+GGG | - | chr7.1:28070652-28070671 | None:intergenic | 50.0% | |
ATAAGGAACCCTAGCCACCT+AGG | - | chr7.1:28070309-28070328 | None:intergenic | 50.0% | |
CAGCAAAGGAGAAGACTGTC+GGG | - | chr7.1:28070653-28070672 | None:intergenic | 50.0% | |
CATATCATAGGTGACCGGCA+TGG | - | chr7.1:28070700-28070719 | None:intergenic | 50.0% | |
CGAAGCAGATGATGAGGCAT+TGG | - | chr7.1:28070901-28070920 | None:intergenic | 50.0% | |
GGTAGCCTACACAAAGTCCT+TGG | + | chr7.1:28069003-28069022 | MS.gene018155:intron | 50.0% | |
GTTTCCCATTTGCGAAGCCA+TGG | + | chr7.1:28068871-28068890 | MS.gene018155:intron | 50.0% | |
TATCGTTGCCCTTCAGCAAC+AGG | + | chr7.1:28068045-28068064 | MS.gene018155:CDS | 50.0% | |
TCTTGCATCCTAGGTGGCTA+GGG | + | chr7.1:28070298-28070317 | MS.gene018155:intron | 50.0% | |
TTCTTGCATCCTAGGTGGCT+AGG | + | chr7.1:28070297-28070316 | MS.gene018155:intron | 50.0% | |
TTGGCATTCCAGCTAGTAGG+AGG | + | chr7.1:28067948-28067967 | MS.gene018155:CDS | 50.0% | |
! | GCAGCTGTGCACAAAGTGTT+TGG | + | chr7.1:28067899-28067918 | MS.gene018155:CDS | 50.0% |
! | GTGGGGCTTGCAAGTTTTTG+AGG | + | chr7.1:28067810-28067829 | MS.gene018155:CDS | 50.0% |
! | TGAGGAGGAAGTGTGTGCAA+GGG | + | chr7.1:28067828-28067847 | MS.gene018155:CDS | 50.0% |
! | TGCCACTGATTGAATCCCAG+CGG | - | chr7.1:28070832-28070851 | None:intergenic | 50.0% |
! | TTGAGGAGGAAGTGTGTGCA+AGG | + | chr7.1:28067827-28067846 | MS.gene018155:CDS | 50.0% |
!! | AGATAATGGAGGGGATAGCG+AGG | - | chr7.1:28069412-28069431 | None:intergenic | 50.0% |
!! | AGCAGATGATGAGGCATTGG+AGG | - | chr7.1:28070898-28070917 | None:intergenic | 50.0% |
!! | GATGATGAGGCATTGGAGGA+TGG | - | chr7.1:28070894-28070913 | None:intergenic | 50.0% |
!! | GGGCTTGCAAGTTTTTGAGG+AGG | + | chr7.1:28067813-28067832 | MS.gene018155:CDS | 50.0% |
AACTCTAGTGGCAGCGGAAG+CGG | + | chr7.1:28067758-28067777 | MS.gene018155:CDS | 55.0% | |
AAGCAGTGGAAGCCCTTGTG+GGG | + | chr7.1:28067793-28067812 | MS.gene018155:CDS | 55.0% | |
ATAGGTGACCGGCATGGTTG+TGG | - | chr7.1:28070694-28070713 | None:intergenic | 55.0% | |
CACCGCTGGGATTCAATCAG+TGG | + | chr7.1:28070827-28070846 | MS.gene018155:CDS | 55.0% | |
GAAGCAGTGGAAGCCCTTGT+GGG | + | chr7.1:28067792-28067811 | MS.gene018155:CDS | 55.0% | |
GCATCAAGCCTCCTACTAGC+TGG | - | chr7.1:28067959-28067978 | None:intergenic | 55.0% | |
TGGTGGAAGAGGTGGCTGTT+GGG | - | chr7.1:28070613-28070632 | None:intergenic | 55.0% | |
TTGGGGGGTCTTTGTTCCAC+AGG | + | chr7.1:28070527-28070546 | MS.gene018155:intron | 55.0% | |
! | ATCCCAGCGGTGGTTGATGT+TGG | - | chr7.1:28070819-28070838 | None:intergenic | 55.0% |
! | CACTGATTGAATCCCAGCGG+TGG | - | chr7.1:28070829-28070848 | None:intergenic | 55.0% |
! | TCCCAGCGGTGGTTGATGTT+GGG | - | chr7.1:28070818-28070837 | None:intergenic | 55.0% |
!! | GGTTGGTGGTAGGTCAGCAA+AGG | - | chr7.1:28070667-28070686 | None:intergenic | 55.0% |
AACCACCGCCACAACCATGC+CGG | + | chr7.1:28070683-28070702 | MS.gene018155:CDS | 60.0% | |
ATGGTTGTGGCGGTGGTTGG+TGG | - | chr7.1:28070681-28070700 | None:intergenic | 60.0% | |
CCCCAACATCAACCACCGCT+GGG | + | chr7.1:28070814-28070833 | MS.gene018155:CDS | 60.0% | |
GGAAGCAGTGGAAGCCCTTG+TGG | + | chr7.1:28067791-28067810 | MS.gene018155:CDS | 60.0% | |
GGAGAAGACTGTCGGGGTTG+CGG | - | chr7.1:28070646-28070665 | None:intergenic | 60.0% | |
! | CCCAGCGGTGGTTGATGTTG+GGG | - | chr7.1:28070817-28070836 | None:intergenic | 60.0% |
! | GTGGTGGAAGAGGTGGCTGT+TGG | - | chr7.1:28070614-28070633 | None:intergenic | 60.0% |
!! | TTGTGGCGGTGGTTGGTGGT+AGG | - | chr7.1:28070677-28070696 | None:intergenic | 60.0% |
GCCACCTCTTCCACCACCAC+AGG | + | chr7.1:28070617-28070636 | MS.gene018155:CDS | 65.0% | |
GCCCCAACATCAACCACCGC+TGG | + | chr7.1:28070813-28070832 | MS.gene018155:CDS | 65.0% | |
GGCATGGTTGTGGCGGTGGT+TGG | - | chr7.1:28070684-28070703 | None:intergenic | 65.0% | |
GGTGACCGGCATGGTTGTGG+CGG | - | chr7.1:28070691-28070710 | None:intergenic | 65.0% | |
TCTAGTGGCAGCGGAAGCGG+TGG | + | chr7.1:28067761-28067780 | MS.gene018155:CDS | 65.0% | |
!! | GCCTGTGGTGGTGGAAGAGG+TGG | - | chr7.1:28070621-28070640 | None:intergenic | 65.0% |
!! | GTCGCCTGTGGTGGTGGAAG+AGG | - | chr7.1:28070624-28070643 | None:intergenic | 65.0% |
AGTGGCAGCGGAAGCGGTGG+TGG | + | chr7.1:28067764-28067783 | MS.gene018155:CDS | 70.0% | |
GACCGGCATGGTTGTGGCGG+TGG | - | chr7.1:28070688-28070707 | None:intergenic | 70.0% | |
GTTGCGGTCGCCTGTGGTGG+TGG | - | chr7.1:28070630-28070649 | None:intergenic | 70.0% | |
GGGGTTGCGGTCGCCTGTGG+TGG | - | chr7.1:28070633-28070652 | None:intergenic | 75.0% | |
GTCGGGGTTGCGGTCGCCTG+TGG | - | chr7.1:28070636-28070655 | None:intergenic | 75.0% | |
! | GGCAGCGGAAGCGGTGGTGG+CGG | + | chr7.1:28067767-28067786 | MS.gene018155:CDS | 75.0% |
!! | AGCGGAAGCGGTGGTGGCGG+CGG | + | chr7.1:28067770-28067789 | MS.gene018155:CDS | 75.0% |
!! | GGTGGTGGCGGCGGAAGCAG+TGG | + | chr7.1:28067779-28067798 | MS.gene018155:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.1 | gene | 28067749 | 28070941 | 28067749 | ID=MS.gene018155 |
chr7.1 | mRNA | 28067749 | 28070941 | 28067749 | ID=MS.gene018155.t1;Parent=MS.gene018155 |
chr7.1 | exon | 28067749 | 28068066 | 28067749 | ID=MS.gene018155.t1.exon1;Parent=MS.gene018155.t1 |
chr7.1 | CDS | 28067749 | 28068066 | 28067749 | ID=cds.MS.gene018155.t1;Parent=MS.gene018155.t1 |
chr7.1 | exon | 28070549 | 28070941 | 28070549 | ID=MS.gene018155.t1.exon2;Parent=MS.gene018155.t1 |
chr7.1 | CDS | 28070549 | 28070941 | 28070549 | ID=cds.MS.gene018155.t1;Parent=MS.gene018155.t1 |
Gene Sequence |
Protein sequence |