AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene018264

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene018264.t1 MTR_6g015975 99.602 251 0 1 1 251 1 250 0.0 514
MS.gene018264.t1 MTR_7g016600 87.352 253 26 5 1 251 1 249 3.33e-159 441
MS.gene018264.t1 MTR_3g084980 66.275 255 69 5 1 250 1 243 5.14e-112 322
MS.gene018264.t1 MTR_8g097090 66.142 254 69 6 1 250 1 241 4.97e-108 311
MS.gene018264.t1 MTR_4g109810 54.762 252 103 4 1 251 1 242 2.46e-85 254
MS.gene018264.t1 MTR_7g075850 51.923 260 106 7 1 251 1 250 2.55e-74 226
MS.gene018264.t1 MTR_8g033270 50.391 256 117 6 1 251 1 251 2.80e-73 224
MS.gene018264.t1 MTR_4g109830 59.172 169 69 0 1 169 1 169 2.33e-63 198
MS.gene018264.t1 MTR_8g066260 45.374 227 115 2 1 227 1 218 8.05e-57 181
MS.gene018264.t1 MTR_6g464720 52.023 173 82 1 1 172 1 173 8.88e-54 174
MS.gene018264.t1 MTR_7g016630 40.234 256 143 4 1 251 1 251 2.55e-51 168
MS.gene018264.t1 MTR_1g101970 49.419 172 85 2 1 171 1 171 1.88e-50 164
MS.gene018264.t1 MTR_5g046790 48.276 174 90 0 1 174 1 174 1.96e-50 164
MS.gene018264.t1 MTR_5g046870 85.185 81 12 0 1 81 1 81 5.56e-47 152
MS.gene018264.t1 MTR_4g102530 50.000 168 83 1 1 168 1 167 2.93e-46 153
MS.gene018264.t1 MTR_7g075870 49.704 169 85 0 1 169 1 169 6.77e-46 152
MS.gene018264.t1 MTR_3g452380 41.071 224 119 4 1 221 16 229 1.03e-44 150
MS.gene018264.t1 MTR_3g005530 45.714 175 94 1 1 175 1 174 3.38e-44 149
MS.gene018264.t1 MTR_7g075870 49.112 169 85 1 1 169 1 168 1.00e-43 147
MS.gene018264.t1 MTR_8g087860 44.253 174 96 1 1 174 17 189 1.14e-43 148
MS.gene018264.t1 MTR_2g017865 44.253 174 96 1 1 174 16 188 1.54e-43 148
MS.gene018264.t1 MTR_8g033220 42.308 208 108 4 1 203 1 201 1.75e-43 147
MS.gene018264.t1 MTR_8g033220 42.308 208 108 4 1 203 1 201 2.53e-43 147
MS.gene018264.t1 MTR_5g046830 47.799 159 76 2 92 250 20 171 3.34e-43 144
MS.gene018264.t1 MTR_2g009890 41.361 191 106 3 1 189 1 187 2.42e-40 140
MS.gene018264.t1 MTR_4g036050 43.195 169 95 1 1 168 1 169 3.47e-37 130
MS.gene018264.t1 MTR_5g031000 35.242 227 131 4 1 214 1 224 3.87e-37 131
MS.gene018264.t1 MTR_5g031000 37.900 219 122 6 1 214 1 210 1.54e-36 129
MS.gene018264.t1 MTR_1g053070 39.744 234 126 7 1 224 1 229 6.96e-36 128
MS.gene018264.t1 MTR_0003s0590 45.763 177 93 2 1 175 1 176 3.03e-35 126
MS.gene018264.t1 MTR_4g036050 43.038 158 89 1 1 157 1 158 5.92e-35 124
MS.gene018264.t1 MTR_1g038300 39.306 173 101 2 1 169 1 173 1.63e-34 124
MS.gene018264.t1 MTR_5g066180 36.199 221 125 6 1 217 1 209 1.73e-33 121
MS.gene018264.t1 MTR_5g032150 41.667 180 103 2 1 180 1 178 1.87e-33 121
MS.gene018264.t1 MTR_4g036050 44.828 145 79 1 1 144 1 145 2.14e-33 119
MS.gene018264.t1 MTR_3g088615 44.898 147 75 3 1 146 1 142 3.25e-33 119
MS.gene018264.t1 MTR_4g036050 45.139 144 78 1 1 143 1 144 3.58e-33 119
MS.gene018264.t1 MTR_5g032520 41.667 168 97 1 1 168 1 167 1.91e-32 118
MS.gene018264.t1 MTR_2g461710 81.967 61 11 0 1 61 1 61 2.81e-31 110
MS.gene018264.t1 MTR_5g021270 36.493 211 115 6 1 203 1 200 8.07e-29 109
MS.gene018264.t1 MTR_5g021270 39.011 182 95 5 1 174 1 174 2.87e-28 107
MS.gene018264.t1 MTR_1g029670 37.989 179 93 4 1 174 1 166 3.01e-28 106
MS.gene018264.t1 MTR_4g093970 38.710 186 106 4 1 182 27 208 4.29e-28 107
MS.gene018264.t1 MTR_3g113030 40.881 159 87 4 1 158 1 153 7.38e-28 106
MS.gene018264.t1 MTR_5g066960 63.333 60 22 0 1 60 1 60 1.76e-21 85.1
MS.gene018264.t1 MTR_4g084740 57.143 70 30 0 1 70 1 70 5.69e-21 90.5
MS.gene018264.t1 MTR_3g102570 44.545 110 47 2 1 105 1 101 9.12e-21 89.7
MS.gene018264.t1 MTR_4g093030 63.333 60 22 0 1 60 1 60 1.02e-20 86.3
MS.gene018264.t1 MTR_2g461760 31.771 192 109 5 63 251 1 173 4.80e-19 82.0
MS.gene018264.t1 MTR_2g461760 40.870 115 62 2 63 174 1 112 4.94e-19 82.0
MS.gene018264.t1 MTR_2g030740 52.174 69 32 1 2 70 9 76 2.42e-17 79.0
MS.gene018264.t1 MTR_1g041615 75.556 45 11 0 16 60 20 64 2.58e-17 76.3
MS.gene018264.t1 MTR_8g086290 41.667 96 52 2 2 97 12 103 3.82e-17 77.0
MS.gene018264.t1 MTR_1g108580 49.275 69 34 1 2 70 9 76 7.97e-17 77.4
MS.gene018264.t1 MTR_1g108510 49.275 69 34 1 2 70 9 76 8.30e-17 77.4
MS.gene018264.t1 MTR_3g030770 49.275 69 34 1 2 70 9 76 9.47e-17 77.0
MS.gene018264.t1 MTR_3g052920 52.174 69 32 1 2 70 9 76 1.43e-16 76.6
MS.gene018264.t1 MTR_2g093190 47.826 69 35 1 2 70 9 76 1.95e-16 76.3
MS.gene018264.t1 MTR_3g052870 49.275 69 34 1 2 70 9 76 7.33e-16 74.3
MS.gene018264.t1 MTR_8g043650 49.275 69 34 1 2 70 9 76 8.71e-16 74.7
MS.gene018264.t1 MTR_5g045560 51.429 70 33 1 1 70 8 76 9.07e-16 74.7
MS.gene018264.t1 MTR_1g075600 49.275 69 34 1 2 70 9 76 1.02e-15 74.3
MS.gene018264.t1 MTR_1g105910 49.275 69 34 1 2 70 9 76 1.13e-15 74.3
MS.gene018264.t1 MTR_1g105920 49.275 69 34 1 2 70 9 76 1.18e-15 74.3
MS.gene018264.t1 MTR_1g077360 49.275 69 34 1 2 70 9 76 2.58e-15 73.2
MS.gene018264.t1 MTR_1g012570 50.725 69 33 1 2 70 9 76 2.89e-15 73.2
MS.gene018264.t1 MTR_2g085280 50.725 69 33 1 2 70 9 76 4.10e-15 72.8
MS.gene018264.t1 MTR_2g085250 50.725 69 33 1 2 70 9 76 4.49e-15 72.8
MS.gene018264.t1 MTR_2g105290 48.611 72 36 1 1 72 11 81 1.20e-14 70.1
MS.gene018264.t1 MTR_1g106070 46.377 69 36 1 2 70 9 76 1.52e-14 70.1
MS.gene018264.t1 MTR_8g051580 49.206 63 31 1 1 63 1 62 1.92e-14 69.7
MS.gene018264.t1 MTR_8g079502 52.632 57 27 0 1 57 1 57 2.51e-14 69.3
MS.gene018264.t1 MTR_5g055100 49.275 69 34 1 2 70 9 76 3.53e-14 70.1
MS.gene018264.t1 MTR_5g053390 49.275 69 34 1 2 70 9 76 4.96e-14 69.7
MS.gene018264.t1 MTR_1g047550 52.632 57 27 0 1 57 1 57 8.00e-14 68.2
MS.gene018264.t1 MTR_4g094632 49.153 59 30 0 1 59 1 59 1.35e-13 67.0
MS.gene018264.t1 MTR_1g054265 50.877 57 28 0 1 57 1 57 1.56e-13 67.0
MS.gene018264.t1 MTR_5g041650 31.319 182 96 5 1 155 38 217 1.76e-13 69.7
MS.gene018264.t1 MTR_0121s0080 46.479 71 35 2 2 70 7 76 2.85e-13 67.8
MS.gene018264.t1 MTR_0121s0100 51.724 58 26 1 2 57 7 64 2.98e-13 65.5
MS.gene018264.t1 MTR_1g063160 49.123 57 29 0 1 57 1 57 3.47e-13 66.2
MS.gene018264.t1 MTR_3g080940 42.857 70 39 1 1 70 8 76 4.01e-13 66.6
MS.gene018264.t1 MTR_4g131030 49.123 57 29 0 1 57 1 57 4.14e-13 67.0
MS.gene018264.t1 MTR_3g030780 43.478 69 38 1 2 70 9 76 5.28e-13 64.7
MS.gene018264.t1 MTR_7g028448 34.307 137 82 4 16 148 26 158 1.13e-12 64.7
MS.gene018264.t1 MTR_4g036915 34.307 137 82 4 16 148 26 158 1.13e-12 64.7
MS.gene018264.t1 MTR_4g094638 36.735 98 51 3 1 98 1 87 1.16e-12 64.7
MS.gene018264.t1 MTR_4g108720 50.943 53 26 0 1 53 1 53 1.95e-12 66.2
MS.gene018264.t1 MTR_8g046350 45.614 57 31 0 1 57 1 57 2.22e-11 60.8
MS.gene018264.t1 MTR_1g105905 48.333 60 30 1 11 70 1 59 3.94e-11 61.2
MS.gene018264.t1 MTR_6g018920 28.276 145 94 3 1 136 1 144 5.62e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene018264.t1 AT3G02310 72.941 255 60 5 1 251 1 250 1.24e-131 372
MS.gene018264.t1 AT5G15800 72.727 264 57 6 1 251 1 262 1.23e-123 352
MS.gene018264.t1 AT5G15800 74.319 257 54 6 1 251 1 251 1.29e-123 352
MS.gene018264.t1 AT1G24260 62.403 258 75 4 1 250 1 244 2.42e-102 298
MS.gene018264.t1 AT1G24260 62.646 257 75 4 1 250 1 243 4.36e-102 297
MS.gene018264.t1 AT3G02310 82.022 178 30 2 1 177 1 177 2.35e-100 291
MS.gene018264.t1 AT1G24260 61.660 253 71 3 1 250 1 230 5.35e-96 281
MS.gene018264.t1 AT2G03710 54.580 262 104 4 1 251 1 258 1.58e-92 273
MS.gene018264.t1 AT2G03710 54.580 262 103 5 1 251 1 257 1.09e-90 268
MS.gene018264.t1 AT2G03710 68.208 173 53 2 1 172 1 172 9.59e-80 238
MS.gene018264.t1 AT2G45650 49.612 258 117 8 1 251 1 252 1.25e-71 220
MS.gene018264.t1 AT1G69120 52.299 174 83 0 1 174 1 174 2.52e-58 185
MS.gene018264.t1 AT1G69120 52.299 174 83 0 1 174 1 174 1.75e-57 184
MS.gene018264.t1 AT1G26310 53.977 176 79 2 1 174 1 176 1.11e-56 182
MS.gene018264.t1 AT5G60910 41.897 253 127 6 1 251 1 235 7.89e-56 179
MS.gene018264.t1 AT3G61120 44.889 225 94 3 1 225 1 195 6.16e-53 172
MS.gene018264.t1 AT3G30260 50.658 152 75 0 1 152 1 152 8.91e-47 156
MS.gene018264.t1 AT4G09960 44.886 176 94 3 1 175 1 174 3.03e-46 154
MS.gene018264.t1 AT4G09960 44.886 176 94 3 1 175 2 175 3.70e-46 154
MS.gene018264.t1 AT4G09960 44.886 176 94 3 1 175 11 184 4.62e-46 154
MS.gene018264.t1 AT2G45660 48.538 171 87 1 1 171 1 170 1.06e-45 152
MS.gene018264.t1 AT4G09960 44.886 176 94 3 1 175 27 200 1.43e-45 153
MS.gene018264.t1 AT3G58780 46.591 176 89 3 1 174 22 194 5.60e-45 152
MS.gene018264.t1 AT3G58780 46.591 176 89 3 1 174 16 188 5.71e-45 151
MS.gene018264.t1 AT2G42830 47.159 176 88 3 1 174 16 188 2.38e-44 150
MS.gene018264.t1 AT4G22950 47.399 173 89 2 1 173 1 171 7.46e-44 146
MS.gene018264.t1 AT4G18960 46.111 180 93 2 2 181 18 193 8.77e-44 149
MS.gene018264.t1 AT4G11880 51.592 157 75 1 1 157 1 156 1.33e-43 145
MS.gene018264.t1 AT4G11880 51.592 157 75 1 1 157 1 156 1.33e-43 145
MS.gene018264.t1 AT2G45660 49.045 157 79 1 1 157 1 156 1.89e-43 144
MS.gene018264.t1 AT4G09960 42.781 187 92 5 1 186 96 268 1.93e-43 150
MS.gene018264.t1 AT4G22950 47.953 171 87 2 1 171 1 169 4.72e-43 145
MS.gene018264.t1 AT4G22950 47.953 171 87 2 1 171 1 169 4.72e-43 145
MS.gene018264.t1 AT4G09960 49.306 144 70 3 1 143 1 142 8.18e-43 145
MS.gene018264.t1 AT2G42830 48.428 159 77 3 1 157 16 171 8.73e-43 146
MS.gene018264.t1 AT3G58780 45.455 176 84 3 1 174 16 181 1.10e-42 145
MS.gene018264.t1 AT4G11880 50.289 173 85 1 1 173 1 172 2.30e-42 144
MS.gene018264.t1 AT4G11880 50.289 173 85 1 1 173 1 172 2.30e-42 144
MS.gene018264.t1 AT3G58780 50.667 150 69 3 1 148 16 162 2.36e-41 143
MS.gene018264.t1 AT3G58780 41.500 200 89 3 1 174 16 213 2.72e-41 142
MS.gene018264.t1 AT4G37940 36.441 236 137 6 1 231 1 228 4.19e-41 141
MS.gene018264.t1 AT5G62165 46.199 171 91 1 1 171 1 170 5.41e-41 140
MS.gene018264.t1 AT5G62165 46.199 171 91 1 1 171 1 170 5.41e-41 140
MS.gene018264.t1 AT5G62165 46.199 171 91 1 1 171 1 170 5.41e-41 140
MS.gene018264.t1 AT3G57230 43.605 172 95 2 1 172 1 170 1.53e-39 137
MS.gene018264.t1 AT3G57230 43.605 172 95 2 1 172 1 170 1.53e-39 137
MS.gene018264.t1 AT5G62165 46.497 157 83 1 1 157 1 156 1.02e-38 132
MS.gene018264.t1 AT5G62165 46.497 157 83 1 1 157 1 156 1.02e-38 132
MS.gene018264.t1 AT5G62165 46.497 157 83 1 1 157 1 156 1.02e-38 132
MS.gene018264.t1 AT3G57230 48.611 144 72 2 1 144 1 142 1.73e-37 129
MS.gene018264.t1 AT2G22630 38.308 201 113 3 1 201 1 190 1.83e-37 131
MS.gene018264.t1 AT2G22630 38.308 201 113 3 1 201 1 190 1.83e-37 131
MS.gene018264.t1 AT5G51870 42.077 183 93 4 1 178 1 175 5.82e-37 129
MS.gene018264.t1 AT5G62165 46.259 147 78 1 1 147 1 146 8.62e-37 127
MS.gene018264.t1 AT5G62165 46.259 147 78 1 1 147 1 146 8.62e-37 127
MS.gene018264.t1 AT5G62165 46.259 147 78 1 1 147 1 146 8.62e-37 127
MS.gene018264.t1 AT5G62165 46.259 147 78 1 1 147 1 146 8.62e-37 127
MS.gene018264.t1 AT5G62165 46.259 147 78 1 1 147 1 146 8.62e-37 127
MS.gene018264.t1 AT4G37940 40.415 193 112 3 1 193 1 190 1.19e-36 129
MS.gene018264.t1 AT5G62165 45.223 157 85 1 1 157 1 156 1.26e-36 128
MS.gene018264.t1 AT5G62165 45.223 157 85 1 1 157 1 156 1.26e-36 128
MS.gene018264.t1 AT2G14210 39.698 199 114 2 1 194 1 198 3.27e-36 128
MS.gene018264.t1 AT2G14210 39.698 199 114 2 1 194 1 198 3.33e-36 128
MS.gene018264.t1 AT2G22540 40.476 168 99 1 1 168 1 167 1.20e-35 127
MS.gene018264.t1 AT2G22540 40.476 168 99 1 1 168 1 167 1.20e-35 127
MS.gene018264.t1 AT5G51860 41.477 176 99 3 1 174 1 174 2.19e-35 125
MS.gene018264.t1 AT5G51870 42.541 181 91 4 1 176 1 173 4.49e-35 125
MS.gene018264.t1 AT5G51870 42.541 181 91 4 1 176 11 183 5.34e-35 125
MS.gene018264.t1 AT5G51860 41.618 173 97 3 1 171 1 171 8.46e-35 124
MS.gene018264.t1 AT4G37940 46.154 143 75 2 1 143 1 141 1.15e-34 122
MS.gene018264.t1 AT5G13790 40.625 224 118 6 1 219 1 214 1.24e-34 125
MS.gene018264.t1 AT3G57390 42.778 180 95 2 1 173 1 179 1.93e-34 124
MS.gene018264.t1 AT5G13790 40.889 225 119 6 1 219 1 217 2.61e-34 124
MS.gene018264.t1 AT3G57390 42.778 180 95 2 1 173 1 179 3.95e-34 124
MS.gene018264.t1 AT1G71692 42.077 183 99 2 1 176 1 183 6.25e-34 122
MS.gene018264.t1 AT5G10140 40.230 174 90 3 1 169 1 165 1.35e-33 120
MS.gene018264.t1 AT5G20240 40.556 180 87 5 1 174 1 166 1.87e-33 120
MS.gene018264.t1 AT5G23260 37.559 213 119 5 1 212 1 200 4.49e-33 120
MS.gene018264.t1 AT5G23260 37.559 213 119 5 1 212 17 216 7.09e-33 120
MS.gene018264.t1 AT5G51870 44.000 150 74 3 1 145 1 145 1.57e-32 117
MS.gene018264.t1 AT5G65050 40.237 169 93 2 1 169 1 161 1.61e-32 117
MS.gene018264.t1 AT5G10140 42.953 149 75 2 1 148 1 140 1.89e-32 117
MS.gene018264.t1 AT5G10140 42.953 149 75 2 1 148 1 140 2.16e-32 117
MS.gene018264.t1 AT5G10140 43.919 148 75 2 1 148 1 140 3.39e-32 117
MS.gene018264.t1 AT5G65050 40.237 169 93 2 1 169 1 161 5.19e-32 116
MS.gene018264.t1 AT5G51870 44.000 150 74 3 1 145 24 168 5.22e-32 116
MS.gene018264.t1 AT5G20240 45.890 146 63 4 1 140 1 136 1.55e-31 114
MS.gene018264.t1 AT5G65060 37.870 169 97 2 1 169 1 161 3.61e-31 114
MS.gene018264.t1 AT5G65050 39.053 169 84 2 1 169 1 150 5.13e-31 114
MS.gene018264.t1 AT5G65060 37.870 169 97 2 1 169 1 161 5.20e-31 114
MS.gene018264.t1 AT5G65050 39.306 173 93 4 1 169 1 165 2.40e-30 112
MS.gene018264.t1 AT4G24540 41.899 179 95 4 1 175 1 174 2.60e-30 112
MS.gene018264.t1 AT5G65070 40.782 179 84 2 1 172 1 164 3.72e-30 112
MS.gene018264.t1 AT2G22540 36.905 168 100 1 1 168 1 162 5.12e-30 112
MS.gene018264.t1 AT5G62165 70.833 72 20 1 1 72 1 71 5.36e-30 108
MS.gene018264.t1 AT5G23260 37.089 213 115 6 1 212 17 211 7.34e-30 112
MS.gene018264.t1 AT5G65060 36.686 169 88 2 1 169 1 150 1.73e-29 109
MS.gene018264.t1 AT5G65080 40.127 157 86 2 1 157 8 156 3.04e-28 106
MS.gene018264.t1 AT5G23260 41.892 148 82 3 1 147 1 145 4.63e-28 107
MS.gene018264.t1 AT3G54340 38.857 175 99 4 1 173 1 169 1.59e-27 105
MS.gene018264.t1 AT5G65070 37.186 199 94 5 1 172 1 195 6.80e-27 104
MS.gene018264.t1 AT1G31140 43.226 155 72 4 1 147 1 147 1.57e-25 100
MS.gene018264.t1 AT1G31140 41.935 155 76 4 1 147 1 149 3.61e-25 99.4
MS.gene018264.t1 AT5G65070 63.380 71 26 0 1 71 1 71 1.07e-24 96.3
MS.gene018264.t1 AT5G65080 34.562 217 122 5 1 217 8 204 2.30e-24 97.1
MS.gene018264.t1 AT5G65070 35.323 201 96 4 1 172 1 196 2.58e-24 97.4
MS.gene018264.t1 AT5G65070 63.380 71 26 0 1 71 1 71 4.31e-24 96.3
MS.gene018264.t1 AT1G77080 38.506 174 99 3 1 174 1 166 5.88e-24 95.1
MS.gene018264.t1 AT1G77080 37.430 179 104 3 1 179 1 171 9.26e-24 94.7
MS.gene018264.t1 AT1G77080 37.791 172 99 3 1 172 1 164 2.78e-23 94.0
MS.gene018264.t1 AT1G22130 47.826 92 39 1 1 92 1 83 1.55e-20 89.4
MS.gene018264.t1 AT1G77080 33.163 196 102 4 1 172 1 191 1.87e-20 87.0
MS.gene018264.t1 AT1G77980 54.054 74 34 0 1 74 1 74 5.36e-20 87.8
MS.gene018264.t1 AT1G69120 40.179 112 67 0 63 174 1 112 9.09e-20 84.3
MS.gene018264.t1 AT1G77080 35.465 172 99 3 1 172 1 160 1.57e-19 84.0
MS.gene018264.t1 AT1G77950 52.857 70 33 0 1 70 1 70 2.95e-17 79.0
MS.gene018264.t1 AT1G77950 52.857 70 33 0 1 70 1 70 2.95e-17 79.0
MS.gene018264.t1 AT1G77950 52.857 70 33 0 1 70 1 70 2.95e-17 79.0
MS.gene018264.t1 AT1G77950 52.857 70 33 0 1 70 1 70 2.95e-17 79.0
MS.gene018264.t1 AT5G60910 30.890 191 112 5 63 251 1 173 4.45e-17 77.0
MS.gene018264.t1 AT1G77080 35.669 157 89 3 1 157 1 145 5.89e-17 75.9
MS.gene018264.t1 AT4G37435 59.649 57 23 0 1 57 1 57 2.63e-16 75.1
MS.gene018264.t1 AT1G01530 52.174 69 32 1 1 69 6 73 2.72e-16 76.3
MS.gene018264.t1 AT1G65360 36.283 113 68 2 1 110 6 117 6.74e-16 74.7
MS.gene018264.t1 AT5G60440 34.043 141 71 4 2 140 7 127 8.75e-15 72.8
MS.gene018264.t1 AT4G36590 41.379 87 50 1 2 88 7 92 1.22e-14 71.6
MS.gene018264.t1 AT2G03060 47.761 67 35 0 1 67 1 67 1.71e-14 72.8
MS.gene018264.t1 AT2G03060 47.761 67 35 0 1 67 1 67 1.71e-14 72.8
MS.gene018264.t1 AT2G03060 47.761 67 35 0 1 67 1 67 1.71e-14 72.8
MS.gene018264.t1 AT2G03060 47.761 67 35 0 1 67 1 67 2.01e-14 72.4
MS.gene018264.t1 AT1G18750 52.632 57 27 0 1 57 1 57 3.26e-14 71.6
MS.gene018264.t1 AT1G18750 52.632 57 27 0 1 57 1 57 3.43e-14 71.6
MS.gene018264.t1 AT1G18750 52.632 57 27 0 1 57 1 57 4.37e-14 71.6
MS.gene018264.t1 AT3G04100 45.205 73 39 1 2 74 14 85 4.42e-14 69.3
MS.gene018264.t1 AT2G24840 47.143 70 36 1 1 70 62 130 4.70e-14 70.5
MS.gene018264.t1 AT1G72350 47.826 69 33 1 2 70 43 108 4.04e-13 67.0
MS.gene018264.t1 AT1G69540 26.638 229 130 7 1 224 1 196 6.89e-13 67.8
MS.gene018264.t1 AT1G69540 26.638 229 130 7 1 224 1 196 7.57e-13 67.8
MS.gene018264.t1 AT2G34440 30.909 165 103 4 1 164 1 155 8.34e-13 65.1
MS.gene018264.t1 AT3G66656 40.845 71 41 1 1 71 1 70 1.87e-12 64.3
MS.gene018264.t1 AT1G47760 36.283 113 61 4 1 112 1 103 5.12e-12 63.2
MS.gene018264.t1 AT1G29962 46.377 69 36 1 2 70 8 75 7.24e-12 62.8
MS.gene018264.t1 AT1G28460 44.928 69 37 1 2 70 8 75 4.15e-11 60.8

Find 49 sgRNAs with CRISPR-Local

Find 195 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTTTGCCTATACTGGTTTC+TGG 0.169304 6.3:-10957731 None:intergenic
CTTCCCATGTTTGCCTATAC+TGG 0.207949 6.3:-10957738 None:intergenic
CTTAATTGCAGAAACCTTCT+TGG 0.232016 6.3:+10956580 MS.gene018264:intron
CTCATAAAGCTTGCCTCTAT+TGG 0.248430 6.3:-10953859 None:intergenic
ACTCAAGCTCAACAAGTTAA+TGG 0.276163 6.3:+10958425 MS.gene018264:CDS
CTGCACCATAGCTGCACTTT+TGG 0.300781 6.3:-10955641 None:intergenic
ACAAAGCTTCTTTCAGCCTT+TGG 0.302611 6.3:+10957804 MS.gene018264:CDS
CTTGATACAGGACTGATTAC+AGG 0.316120 6.3:+10958363 MS.gene018264:intron
ATTAGCTGATCTTCAAAATA+AGG 0.323444 6.3:+10957287 MS.gene018264:CDS
CAAGTTAATGGATTTATTCC+TGG 0.326103 6.3:+10958437 MS.gene018264:CDS
TTCAAGCTGCTCAAGATCTT+TGG 0.326567 6.3:-10956626 None:intergenic
TTTATATACCTCAAGCTCTT+TGG 0.339567 6.3:-10955682 None:intergenic
GGTGAAGACTTAGGTCCATT+AGG 0.390262 6.3:+10956601 MS.gene018264:CDS
CTTATTATCTTCTCCAATAG+AGG 0.396704 6.3:+10953846 MS.gene018264:CDS
ATTCATCTCTCAAGCAAGTC+AGG 0.421259 6.3:+10956659 MS.gene018264:CDS
ACATTTGCAAAGAGAAGAAA+TGG 0.424187 6.3:+10953771 MS.gene018264:CDS
GGAAGCTGGTGATCAAAGTA+TGG 0.434521 6.3:+10957756 MS.gene018264:CDS
TCAAGATCTTTGGTACCTAA+TGG 0.441434 6.3:-10956616 None:intergenic
TATTACCCTATCTGCAATGT+TGG 0.448140 6.3:-10957835 None:intergenic
GCATGCTCAAAACACTTGAT+AGG 0.454651 6.3:+10955616 MS.gene018264:intron
AAACAGATCTTTGTCTATGA+AGG 0.464986 6.3:+10957408 MS.gene018264:CDS
TGCAATCCAACATTGCAGAT+AGG 0.474506 6.3:+10957829 MS.gene018264:CDS
GTTAGCTGATCTGATGCTAC+TGG 0.476275 6.3:-10958395 None:intergenic
GAGGAAGAGTGGAATTGAAA+AGG 0.478417 6.3:+10953721 MS.gene018264:CDS
TATACCTCAAGCTCTTTGGC+AGG 0.482984 6.3:-10955678 None:intergenic
GCAATCCAACATTGCAGATA+GGG 0.488188 6.3:+10957830 MS.gene018264:CDS
AACCTTCTTGGTGAAGACTT+AGG 0.497236 6.3:+10956592 MS.gene018264:CDS
ACTAAATTTGAATACCTTGG+TGG 0.499386 6.3:-10956683 None:intergenic
TATAGGCAAACATGGGAAGC+TGG 0.508553 6.3:+10957742 MS.gene018264:CDS
TCAATTCCAGAAACCAGTAT+AGG 0.510896 6.3:+10957725 MS.gene018264:CDS
CAAGATTTGAATCTCTTCAA+AGG 0.513932 6.3:+10956459 MS.gene018264:CDS
AGGTACCAAAAGTGCAGCTA+TGG 0.519687 6.3:+10955636 MS.gene018264:CDS
GGTGATCAAAGTATGGCATA+TGG 0.522384 6.3:+10957763 MS.gene018264:CDS
GAAAATGGGAAGAGGAAGAG+TGG 0.539131 6.3:+10953710 None:intergenic
TTAATGGATTTATTCCTGGA+TGG 0.541666 6.3:+10958441 MS.gene018264:CDS
AATCTCTTCAAAGGACTCAA+AGG 0.546223 6.3:+10956468 MS.gene018264:CDS
GACCTAAGTCTTCACCAAGA+AGG 0.551505 6.3:-10956594 None:intergenic
TTTGCAGACTCAATTCATGC+TGG 0.554411 6.3:+10957260 MS.gene018264:intron
TTGAAGTTGAAAATGGGAAG+AGG 0.556816 6.3:+10953702 None:intergenic
CTTTCAGCTTCAAGTACTCA+CGG 0.561889 6.3:-10956436 None:intergenic
GAAACCAGTATAGGCAAACA+TGG 0.575578 6.3:+10957734 MS.gene018264:CDS
TTAGCTCAAAGCATCCATCC+AGG 0.582969 6.3:-10958455 None:intergenic
GCTTGAGAGATGAATCAAGT+TGG 0.598020 6.3:-10956651 None:intergenic
CAAACCTGCCAAAGAGCTTG+AGG 0.604710 6.3:+10955674 MS.gene018264:CDS
AATGTTGGATTGCACTCCAA+AGG 0.620049 6.3:-10957820 None:intergenic
AGCTGATCTGATGCTACTGG+AGG 0.648548 6.3:-10958392 None:intergenic
GTGTACATAGGAGCATATGT+TGG 0.664737 6.3:+10957378 MS.gene018264:intron
AAACCAGTATAGGCAAACAT+GGG 0.689634 6.3:+10957735 MS.gene018264:CDS
CAAGCAAGTCAGGTCCACCA+AGG 0.698134 6.3:+10956669 MS.gene018264:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTGAGAAATTTATTTAT+TGG - chr6.3:10954534-10954553 None:intergenic 10.0%
!! TAAATAAAATTAAGATAATG+AGG - chr6.3:10955428-10955447 None:intergenic 10.0%
!!! AATTTCTCAATTTTTTTTTA+AGG + chr6.3:10954541-10954560 MS.gene018264:intron 10.0%
!!! ATAGATTCAATATATTTTAT+AGG - chr6.3:10958316-10958335 None:intergenic 10.0%
!!! ATTTCTCAATTTTTTTTTAA+GGG + chr6.3:10954542-10954561 MS.gene018264:intron 10.0%
!!! TTTTATCAAATATTTTATTC+AGG - chr6.3:10956806-10956825 None:intergenic 10.0%
!! AAATTTCATTGAAAACAAAA+GGG - chr6.3:10954803-10954822 None:intergenic 15.0%
!! ACAAATCAATAACAAATTTA+GGG - chr6.3:10957991-10958010 None:intergenic 15.0%
!! ACATATATTCAAATAAATCA+AGG + chr6.3:10954480-10954499 MS.gene018264:intron 15.0%
!! ATATATGTGAAAAAATTTAG+AGG + chr6.3:10956020-10956039 MS.gene018264:intron 15.0%
!! ATTAAAAAAAAAATTGTTGC+CGG + chr6.3:10957963-10957982 MS.gene018264:intron 15.0%
!! GAAAAAAGAAAAAAAAGAAA+TGG + chr6.3:10955215-10955234 MS.gene018264:intron 15.0%
!! GATATAGAAATACAAATATT+AGG - chr6.3:10954690-10954709 None:intergenic 15.0%
!! TACAAATCAATAACAAATTT+AGG - chr6.3:10957992-10958011 None:intergenic 15.0%
!! TTAAAATATTAATAGAGTCA+GGG + chr6.3:10957148-10957167 MS.gene018264:intron 15.0%
!!! ATTGACAAAAATTTTTTCTA+GGG - chr6.3:10955261-10955280 None:intergenic 15.0%
!!! CTTTTTTTTTTTTTTCTTGA+AGG + chr6.3:10954333-10954352 MS.gene018264:intron 15.0%
!!! GGTTTAAGAAATTATTATTT+TGG + chr6.3:10954096-10954115 MS.gene018264:intron 15.0%
!!! TAGAAAAAATTTTTGTCAAT+GGG + chr6.3:10955261-10955280 MS.gene018264:intron 15.0%
!!! TTGAAAGTATATCAATAAAT+TGG + chr6.3:10956964-10956983 MS.gene018264:intron 15.0%
!!! TTTAAAATATTAATAGAGTC+AGG + chr6.3:10957147-10957166 MS.gene018264:intron 15.0%
!!! TTTATTTTAATTTTCTGTGT+TGG + chr6.3:10954135-10954154 MS.gene018264:intron 15.0%
!!! TTTGTTATTGATTTGTAATT+AGG + chr6.3:10957995-10958014 MS.gene018264:intron 15.0%
!!! TTTTGATATCTAACATTATA+TGG + chr6.3:10957229-10957248 MS.gene018264:intron 15.0%
!! AAATATCTTTGCATTTAGAT+AGG + chr6.3:10954602-10954621 MS.gene018264:intron 20.0%
!! AATTTGCAATCAAGAAATTA+AGG + chr6.3:10955372-10955391 MS.gene018264:intron 20.0%
!! ATTAAACAAATACATCATGT+TGG - chr6.3:10955355-10955374 None:intergenic 20.0%
!! ATTAATGTGAATGAATGAAT+AGG - chr6.3:10957644-10957663 None:intergenic 20.0%
!! CAAATCAATAACAAATTTAG+GGG - chr6.3:10957990-10958009 None:intergenic 20.0%
!! CAACTTAATTAAGCATTTAT+AGG + chr6.3:10955764-10955783 MS.gene018264:intron 20.0%
!! GAAATTTCATTGAAAACAAA+AGG - chr6.3:10954804-10954823 None:intergenic 20.0%
!! GTAATAATAAGCTATTCATA+AGG - chr6.3:10956942-10956961 None:intergenic 20.0%
!! TGAAGAGAAAAAAATAACTT+TGG - chr6.3:10954740-10954759 None:intergenic 20.0%
!! TTGTTAAAAGTTTCTCATTT+AGG + chr6.3:10957056-10957075 MS.gene018264:intron 20.0%
!!! AAAAATGGATTATATGTGTT+AGG - chr6.3:10957358-10957377 None:intergenic 20.0%
!!! ATCAATTGGTAGTATTTATA+AGG - chr6.3:10955908-10955927 None:intergenic 20.0%
!!! ATTACTATTTTGTTTAAAGC+TGG + chr6.3:10957690-10957709 MS.gene018264:intron 20.0%
!!! ATTGTGAATTCTTTTTGAAA+AGG + chr6.3:10957533-10957552 MS.gene018264:intron 20.0%
!!! ATTGTTATTCATGAATTGAT+TGG + chr6.3:10955568-10955587 MS.gene018264:intron 20.0%
!!! ATTTTACTAATTGAACAGTA+TGG - chr6.3:10956776-10956795 None:intergenic 20.0%
!!! CATTGACAAAAATTTTTTCT+AGG - chr6.3:10955262-10955281 None:intergenic 20.0%
!!! CTAGAAAAAATTTTTGTCAA+TGG + chr6.3:10955260-10955279 MS.gene018264:intron 20.0%
!!! TTGGTATTATTTGAGTTTAA+TGG + chr6.3:10954154-10954173 MS.gene018264:intron 20.0%
!!! TTGTCAAAATTTTCTCAATT+AGG - chr6.3:10957114-10957133 None:intergenic 20.0%
! AATTAAGGAACAAAATGACA+TGG - chr6.3:10956567-10956586 None:intergenic 25.0%
! AGCAACAACAGAAAATAAAA+TGG - chr6.3:10957870-10957889 None:intergenic 25.0%
! AGGAAAAAGAACAAAAAGTA+AGG - chr6.3:10955018-10955037 None:intergenic 25.0%
! ATGAAAACTTAAAGTTGACA+AGG + chr6.3:10955936-10955955 MS.gene018264:intron 25.0%
! ATGACTGAAAACTATCATAT+AGG - chr6.3:10954990-10955009 None:intergenic 25.0%
! ATTAGCTGATCTTCAAAATA+AGG + chr6.3:10957287-10957306 MS.gene018264:CDS 25.0%
! ATTAGGTTTAATTACTCTCT+AGG + chr6.3:10957903-10957922 MS.gene018264:intron 25.0%
! ATTGCATATGGCTTATATTT+AGG - chr6.3:10955848-10955867 None:intergenic 25.0%
! CAATATATATCCCTACATTT+AGG - chr6.3:10955330-10955349 None:intergenic 25.0%
! CTAAATGTAGGGATATATAT+TGG + chr6.3:10955328-10955347 MS.gene018264:intron 25.0%
! CTATATCTCTAATTTCTGTT+TGG + chr6.3:10954703-10954722 MS.gene018264:intron 25.0%
! CTGAATTGGGATATATTTAA+TGG + chr6.3:10955119-10955138 MS.gene018264:intron 25.0%
! GTTAGAGCTAAAATGAAAAA+GGG + chr6.3:10955193-10955212 MS.gene018264:intron 25.0%
! TAACCTACTCTTACAATATA+AGG + chr6.3:10957599-10957618 MS.gene018264:intron 25.0%
! TATTTATTGGTACTAAACTC+AGG - chr6.3:10954521-10954540 None:intergenic 25.0%
! TGAAAACTTAAAGTTGACAA+GGG + chr6.3:10955937-10955956 MS.gene018264:intron 25.0%
! TGCACATATTAAATTGCATA+TGG - chr6.3:10955860-10955879 None:intergenic 25.0%
! TGTTAGAGCTAAAATGAAAA+AGG + chr6.3:10955192-10955211 MS.gene018264:intron 25.0%
! TTGCATATGGCTTATATTTA+GGG - chr6.3:10955847-10955866 None:intergenic 25.0%
!! GTATTTATAAGGAGTATGTT+TGG - chr6.3:10955897-10955916 None:intergenic 25.0%
!! TCACATTTTACTGTAACTTA+GGG - chr6.3:10956829-10956848 None:intergenic 25.0%
!! TTCACATTTTACTGTAACTT+AGG - chr6.3:10956830-10956849 None:intergenic 25.0%
!! TTTAGCATTTTCTTGTGATT+TGG + chr6.3:10955516-10955535 MS.gene018264:intron 25.0%
!! TTTCATTTTCGAAGATCAAT+TGG - chr6.3:10955922-10955941 None:intergenic 25.0%
!!! TAATCCATTTTTGTGTACAT+AGG + chr6.3:10957366-10957385 MS.gene018264:intron 25.0%
!!! TATTTTGAAGATCAGCTAAT+TGG - chr6.3:10957287-10957306 None:intergenic 25.0%
!!! TTTACAAGTGTGTCTTTTTT+TGG + chr6.3:10956193-10956212 MS.gene018264:intron 25.0%
!!! TTTTTTGGTAGTGTATTTAC+AGG + chr6.3:10956208-10956227 MS.gene018264:intron 25.0%
AAACAGATCTTTGTCTATGA+AGG + chr6.3:10957408-10957427 MS.gene018264:CDS 30.0%
ACACATATATGTGCTGAATT+GGG + chr6.3:10955106-10955125 MS.gene018264:intron 30.0%
ACATTTGCAAAGAGAAGAAA+TGG + chr6.3:10953771-10953790 MS.gene018264:CDS 30.0%
ACCACTAAATTTGAATACCT+TGG - chr6.3:10956689-10956708 None:intergenic 30.0%
ACTAAATTTGAATACCTTGG+TGG - chr6.3:10956686-10956705 None:intergenic 30.0%
AGATGTTGAAAAAAAATGCG+TGG - chr6.3:10956291-10956310 None:intergenic 30.0%
AGTCCTTATATTGTAAGAGT+AGG - chr6.3:10957605-10957624 None:intergenic 30.0%
ATATGTAAATCTAGTACTGC+TGG - chr6.3:10954466-10954485 None:intergenic 30.0%
CAAGATTTGAATCTCTTCAA+AGG + chr6.3:10956459-10956478 MS.gene018264:CDS 30.0%
CTTATTATCTTCTCCAATAG+AGG + chr6.3:10953846-10953865 MS.gene018264:CDS 30.0%
GAAAACTTAAAGTTGACAAG+GGG + chr6.3:10955938-10955957 MS.gene018264:intron 30.0%
GATCTTCAAAATAAGGTACA+TGG + chr6.3:10957294-10957313 MS.gene018264:intron 30.0%
GTAAGAACAAACCACTAAAT+TGG - chr6.3:10957206-10957225 None:intergenic 30.0%
GTACATGATCTGGTAAATAT+TGG + chr6.3:10954199-10954218 MS.gene018264:intron 30.0%
TAAGAATCAGAAACATACCT+AGG - chr6.3:10953897-10953916 None:intergenic 30.0%
TACTCATTCTGTCATATTGA+AGG + chr6.3:10955045-10955064 MS.gene018264:intron 30.0%
TGAAGTTATAGTACATGATC+TGG + chr6.3:10954189-10954208 MS.gene018264:intron 30.0%
TGGTCTTTGTCTTTGTAATT+CGG + chr6.3:10956984-10957003 MS.gene018264:intron 30.0%
TGTGTTAGAAACTCCAAAAT+TGG + chr6.3:10954662-10954681 MS.gene018264:intron 30.0%
TTAATGAAATCATCAGCACA+AGG - chr6.3:10957671-10957690 None:intergenic 30.0%
TTGATTCTACTTGGATTTGT+TGG + chr6.3:10954075-10954094 MS.gene018264:intron 30.0%
TTGCATTTAGATAGGACTTA+AGG + chr6.3:10954610-10954629 MS.gene018264:intron 30.0%
TTTAGAGGTCCTTAGAAAAA+TGG + chr6.3:10956035-10956054 MS.gene018264:intron 30.0%
TTTATATACCTCAAGCTCTT+TGG - chr6.3:10955685-10955704 None:intergenic 30.0%
TTTCATTGAAAACAAAAGGG+AGG - chr6.3:10954800-10954819 None:intergenic 30.0%
! ACCAAGGTATTCAAATTTAG+TGG + chr6.3:10956685-10956704 MS.gene018264:intron 30.0%
! ATTTGAAGCTTGATTCTACT+TGG + chr6.3:10954066-10954085 MS.gene018264:intron 30.0%
! CAAATATTAGGCTCCAATTT+TGG - chr6.3:10954678-10954697 None:intergenic 30.0%
! GGACAAAATTTTCTTCAAAG+AGG - chr6.3:10955826-10955845 None:intergenic 30.0%
!! AGTAGGTTACTTTAGTCTTA+AGG - chr6.3:10957588-10957607 None:intergenic 30.0%
!! ATGTTTTTATCACATGACGA+GGG - chr6.3:10957083-10957102 None:intergenic 30.0%
!! CAAGTTAATGGATTTATTCC+TGG + chr6.3:10958437-10958456 MS.gene018264:CDS 30.0%
!! CACAGTTTTGATCTTGAAAA+TGG + chr6.3:10956870-10956889 MS.gene018264:intron 30.0%
!! TATGTTTTTATCACATGACG+AGG - chr6.3:10957084-10957103 None:intergenic 30.0%
!! TGCTAAAGCTGATTTGAATT+AGG + chr6.3:10957886-10957905 MS.gene018264:intron 30.0%
!! TTAATGGATTTATTCCTGGA+TGG + chr6.3:10958441-10958460 MS.gene018264:CDS 30.0%
AAACCAGTATAGGCAAACAT+GGG + chr6.3:10957735-10957754 MS.gene018264:CDS 35.0%
AAAGACAGAGACCAATTTAG+TGG + chr6.3:10957192-10957211 MS.gene018264:intron 35.0%
AATCTCTTCAAAGGACTCAA+AGG + chr6.3:10956468-10956487 MS.gene018264:CDS 35.0%
ACCATGCATAAGAACAATAG+TGG - chr6.3:10957456-10957475 None:intergenic 35.0%
ACCTACTTATAGTGCATGTT+TGG + chr6.3:10958142-10958161 MS.gene018264:intron 35.0%
ACTCAAGCTCAACAAGTTAA+TGG + chr6.3:10958425-10958444 MS.gene018264:CDS 35.0%
ATAACCATGCTCCTAAATGT+AGG + chr6.3:10955316-10955335 MS.gene018264:intron 35.0%
CAAGAAGGTTTCTGCAATTA+AGG - chr6.3:10956582-10956601 None:intergenic 35.0%
CAATAACAAATTTAGGGGTC+CGG - chr6.3:10957985-10958004 None:intergenic 35.0%
CACACATATATGTGCTGAAT+TGG + chr6.3:10955105-10955124 MS.gene018264:intron 35.0%
CGATAAGTTAGCCAAAATCA+CGG - chr6.3:10958250-10958269 None:intergenic 35.0%
CTTAATTGCAGAAACCTTCT+TGG + chr6.3:10956580-10956599 MS.gene018264:intron 35.0%
GACAGAATGAGTATCATAAC+AGG - chr6.3:10955038-10955057 None:intergenic 35.0%
TAACCATGCTCCTAAATGTA+GGG + chr6.3:10955317-10955336 MS.gene018264:intron 35.0%
TATTACCCTATCTGCAATGT+TGG - chr6.3:10957838-10957857 None:intergenic 35.0%
TCAAGATCTTTGGTACCTAA+TGG - chr6.3:10956619-10956638 None:intergenic 35.0%
TCAATTCCAGAAACCAGTAT+AGG + chr6.3:10957725-10957744 MS.gene018264:CDS 35.0%
TCATAAGGAAACTTCAGACT+AGG - chr6.3:10956927-10956946 None:intergenic 35.0%
TCATGTGTCTATTTAGTGTG+TGG - chr6.3:10955978-10955997 None:intergenic 35.0%
TCCAAACATGCACTATAAGT+AGG - chr6.3:10958146-10958165 None:intergenic 35.0%
TGCTCCTATGTACACAAAAA+TGG - chr6.3:10957373-10957392 None:intergenic 35.0%
TTCAAAGAGGCTTATAACCA+GGG - chr6.3:10955813-10955832 None:intergenic 35.0%
! AAATTGGTCTCTGTCTTTGT+AGG - chr6.3:10957190-10957209 None:intergenic 35.0%
! GTGTACTTGTCTAAAGTACT+TGG + chr6.3:10957495-10957514 MS.gene018264:intron 35.0%
!! TGCTGATTCAAGGAAAACAA+AGG - chr6.3:10955599-10955618 None:intergenic 35.0%
!! TTCATCCGTCCATTTTTCTA+AGG - chr6.3:10956047-10956066 None:intergenic 35.0%
!!! CGTGATTTTGGCTAACTTAT+CGG + chr6.3:10958248-10958267 MS.gene018264:intron 35.0%
AAAGAAATGGCCTCACAACA+TGG + chr6.3:10955228-10955247 MS.gene018264:intron 40.0%
AACAATAGTGGCATGGATGA+TGG - chr6.3:10957444-10957463 None:intergenic 40.0%
AACCTTCTTGGTGAAGACTT+AGG + chr6.3:10956592-10956611 MS.gene018264:CDS 40.0%
AAGCCATTGTTCCTTGATAC+AGG + chr6.3:10958351-10958370 MS.gene018264:intron 40.0%
AATGTTGGATTGCACTCCAA+AGG - chr6.3:10957823-10957842 None:intergenic 40.0%
ACAAAGCTTCTTTCAGCCTT+TGG + chr6.3:10957804-10957823 MS.gene018264:CDS 40.0%
AGTCCTGTATCAAGGAACAA+TGG - chr6.3:10958357-10958376 None:intergenic 40.0%
ATTCATCTCTCAAGCAAGTC+AGG + chr6.3:10956659-10956678 MS.gene018264:CDS 40.0%
ATTGAAAACAAAAGGGAGGC+CGG - chr6.3:10954796-10954815 None:intergenic 40.0%
CTCATAAAGCTTGCCTCTAT+TGG - chr6.3:10953862-10953881 None:intergenic 40.0%
CTGTAATCAGTCCTGTATCA+AGG - chr6.3:10958365-10958384 None:intergenic 40.0%
CTTCAAAGAGGCTTATAACC+AGG - chr6.3:10955814-10955833 None:intergenic 40.0%
CTTGATACAGGACTGATTAC+AGG + chr6.3:10958363-10958382 MS.gene018264:intron 40.0%
CTTTCAGCTTCAAGTACTCA+CGG - chr6.3:10956439-10956458 None:intergenic 40.0%
GAAACCAGTATAGGCAAACA+TGG + chr6.3:10957734-10957753 MS.gene018264:CDS 40.0%
GAGGAAGAGTGGAATTGAAA+AGG + chr6.3:10953721-10953740 MS.gene018264:CDS 40.0%
GAGGTCCTTAGAAAAATGGA+CGG + chr6.3:10956039-10956058 MS.gene018264:intron 40.0%
GCAATCCAACATTGCAGATA+GGG + chr6.3:10957830-10957849 MS.gene018264:CDS 40.0%
GCATAAGAACAATAGTGGCA+TGG - chr6.3:10957451-10957470 None:intergenic 40.0%
GCATGCTCAAAACACTTGAT+AGG + chr6.3:10955616-10955635 MS.gene018264:intron 40.0%
GCCACTATTGTTCTTATGCA+TGG + chr6.3:10957452-10957471 MS.gene018264:intron 40.0%
GCTTGAGAGATGAATCAAGT+TGG - chr6.3:10956654-10956673 None:intergenic 40.0%
GGGTAAAGAGGTAGCATATT+AGG - chr6.3:10954771-10954790 None:intergenic 40.0%
GGGTTAAATTCCATGTTGTG+AGG - chr6.3:10955241-10955260 None:intergenic 40.0%
GGTGATCAAAGTATGGCATA+TGG + chr6.3:10957763-10957782 MS.gene018264:CDS 40.0%
TATCCCTACATTTAGGAGCA+TGG - chr6.3:10955323-10955342 None:intergenic 40.0%
TGCAATCCAACATTGCAGAT+AGG + chr6.3:10957829-10957848 MS.gene018264:CDS 40.0%
TTCAAGCTGCTCAAGATCTT+TGG - chr6.3:10956629-10956648 None:intergenic 40.0%
TTTGCAGACTCAATTCATGC+TGG + chr6.3:10957260-10957279 MS.gene018264:intron 40.0%
! GTGTACATAGGAGCATATGT+TGG + chr6.3:10957378-10957397 MS.gene018264:intron 40.0%
!! ATGAGTTTTGTAGCAGTCCT+AGG + chr6.3:10953877-10953896 MS.gene018264:CDS 40.0%
!! TGTTTGCCTATACTGGTTTC+TGG - chr6.3:10957734-10957753 None:intergenic 40.0%
!!! GTTTTGAGCATGCTGATTCA+AGG - chr6.3:10955609-10955628 None:intergenic 40.0%
CTTCCCATGTTTGCCTATAC+TGG - chr6.3:10957741-10957760 None:intergenic 45.0%
GACCTAAGTCTTCACCAAGA+AGG - chr6.3:10956597-10956616 None:intergenic 45.0%
GGAAGCTGGTGATCAAAGTA+TGG + chr6.3:10957756-10957775 MS.gene018264:CDS 45.0%
GGTGAAGACTTAGGTCCATT+AGG + chr6.3:10956601-10956620 MS.gene018264:CDS 45.0%
GTTAGCTGATCTGATGCTAC+TGG - chr6.3:10958398-10958417 None:intergenic 45.0%
TATACCTCAAGCTCTTTGGC+AGG - chr6.3:10955681-10955700 None:intergenic 45.0%
TATAGGCAAACATGGGAAGC+TGG + chr6.3:10957742-10957761 MS.gene018264:CDS 45.0%
TCATATACTACCTTCGTCCC+TGG + chr6.3:10955793-10955812 MS.gene018264:intron 45.0%
TTGAAAACAAAAGGGAGGCC+GGG - chr6.3:10954795-10954814 None:intergenic 45.0%
! ACAGTGACTCACCGTGATTT+TGG + chr6.3:10958236-10958255 MS.gene018264:intron 45.0%
! AGGTACCAAAAGTGCAGCTA+TGG + chr6.3:10955636-10955655 MS.gene018264:CDS 45.0%
!!! CTATTTTAAATTTTTTAAAT+AGG + chr6.3:10957933-10957952 MS.gene018264:intron 5.0%
!!! TAAAAAATTTAAAATAGTTT+AGG - chr6.3:10957930-10957949 None:intergenic 5.0%
!!! TCAAATTATTTAAAATTTTA+AGG + chr6.3:10958119-10958138 MS.gene018264:intron 5.0%
!!! TTTGATTTTTTATTTTTTTT+TGG + chr6.3:10954014-10954033 MS.gene018264:intron 5.0%
!!! TTTTAATATATATTTTTTTG+TGG + chr6.3:10953948-10953967 MS.gene018264:intron 5.0%
AGCTGATCTGATGCTACTGG+AGG - chr6.3:10958395-10958414 None:intergenic 50.0%
AGGCTTATAACCAGGGACGA+AGG - chr6.3:10955806-10955825 None:intergenic 50.0%
CAAACCTGCCAAAGAGCTTG+AGG + chr6.3:10955674-10955693 MS.gene018264:CDS 50.0%
TGAAAACAAAAGGGAGGCCG+GGG - chr6.3:10954794-10954813 None:intergenic 50.0%
! CTGCACCATAGCTGCACTTT+TGG - chr6.3:10955644-10955663 None:intergenic 50.0%
AAAACAAAAGGGAGGCCGGG+GGG - chr6.3:10954792-10954811 None:intergenic 55.0%
ATGCTACCTCTTTACCCCCC+CGG + chr6.3:10954774-10954793 MS.gene018264:intron 55.0%
CAAGCAAGTCAGGTCCACCA+AGG + chr6.3:10956669-10956688 MS.gene018264:CDS 55.0%
GAAAACAAAAGGGAGGCCGG+GGG - chr6.3:10954793-10954812 None:intergenic 55.0%
AAACAAAAGGGAGGCCGGGG+GGG - chr6.3:10954791-10954810 None:intergenic 60.0%
GGGAGGCCGGGGGGGTAAAG+AGG - chr6.3:10954783-10954802 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr6.3 gene 10953714 10958472 10953714 ID=MS.gene018264
chr6.3 mRNA 10953714 10958472 10953714 ID=MS.gene018264.t1;Parent=MS.gene018264
chr6.3 exon 10953714 10953898 10953714 ID=MS.gene018264.t1.exon1;Parent=MS.gene018264.t1
chr6.3 CDS 10953714 10953898 10953714 ID=cds.MS.gene018264.t1;Parent=MS.gene018264.t1
chr6.3 exon 10955617 10955695 10955617 ID=MS.gene018264.t1.exon2;Parent=MS.gene018264.t1
chr6.3 CDS 10955617 10955695 10955617 ID=cds.MS.gene018264.t1;Parent=MS.gene018264.t1
chr6.3 exon 10956425 10956489 10956425 ID=MS.gene018264.t1.exon3;Parent=MS.gene018264.t1
chr6.3 CDS 10956425 10956489 10956425 ID=cds.MS.gene018264.t1;Parent=MS.gene018264.t1
chr6.3 exon 10956591 10956690 10956591 ID=MS.gene018264.t1.exon4;Parent=MS.gene018264.t1
chr6.3 CDS 10956591 10956690 10956591 ID=cds.MS.gene018264.t1;Parent=MS.gene018264.t1
chr6.3 exon 10957267 10957308 10957267 ID=MS.gene018264.t1.exon5;Parent=MS.gene018264.t1
chr6.3 CDS 10957267 10957308 10957267 ID=cds.MS.gene018264.t1;Parent=MS.gene018264.t1
chr6.3 exon 10957388 10957429 10957388 ID=MS.gene018264.t1.exon6;Parent=MS.gene018264.t1
chr6.3 CDS 10957388 10957429 10957388 ID=cds.MS.gene018264.t1;Parent=MS.gene018264.t1
chr6.3 exon 10957709 10957851 10957709 ID=MS.gene018264.t1.exon7;Parent=MS.gene018264.t1
chr6.3 CDS 10957709 10957851 10957709 ID=cds.MS.gene018264.t1;Parent=MS.gene018264.t1
chr6.3 exon 10958373 10958472 10958373 ID=MS.gene018264.t1.exon8;Parent=MS.gene018264.t1
chr6.3 CDS 10958373 10958472 10958373 ID=cds.MS.gene018264.t1;Parent=MS.gene018264.t1
Gene Sequence

>MS.gene018264

ATGGGAAGAGGAAGAGTGGAATTGAAAAGGATAGAGAATAAGATAAACAGACAAGTAACATTTGCAAAGAGAAGAAATGGACTTCTTAAGAAAGCTTACGAATTATCTGTTCTTTGTGATGCTGAAGTTGCTCTTATTATCTTCTCCAATAGAGGCAAGCTTTATGAGTTTTGTAGCAGTCCTAGGTATGTTTCTGATTCTTATTTTTGTGTTTTCTTTTATAATTTTATAATTTTTTAATATATATTTTTTTGTGGAATCATAAACATGTATGTATGTATAACTAATTGACTGAGTTTCTTTGATTTTTTATTTTTTTTTGGTTTGTTGATTGATTTATTAGATATATTTTATTTGAAGCTTGATTCTACTTGGATTTGTTGGTTTAAGAAATTATTATTTTGGATTTCTTTCTCTGTAATTTATTTTAATTTTCTGTGTTGGTATTATTTGAGTTTAATGGATTCATGAGATCTGAAGTTATAGTACATGATCTGGTAAATATTGGATGTGTTATTATTATTTTTTATTTTTATTTTTATAAAAATACTTGTGTTTTTCATATCTTTGTTTTGAGAAAGTTGATCTGATTAAATTCATGTGATACTTTTCTTTCTTTCTTTTTTTTTTTTTTCTTGAAGGATTTGTATTTTTGAGCTGATGATTTTTGTTTGTTTATTTTAGAATTTAATTTAATATTTGATTTACTTTCTAGAGATTTTTTTTTTAAAGTAACTGACAAGTTGTTACCAGCAGTACTAGATTTACATATATTCAAATAAATCAAGGACATGATGTTAGCATCCTGAGTTTAGTACCAATAAATAAATTTCTCAATTTTTTTTTAAGGGAATAAACAAATTTCTCTTTGTTTACTCTAAAATTAACAAATATCTTTGCATTTAGATAGGACTTAAGGATGATTAATTTCATTGATAAAGTGATTTCTGTGTTAGAAACTCCAAAATTGGAGCCTAATATTTGTATTTCTATATCTCTAATTTCTGTTTGGAATTTTTCATGCCAAAGTTATTTTTTTCTCTTCAATTTATCACCTAATATGCTACCTCTTTACCCCCCCGGCCTCCCTTTTGTTTTCAATGAAATTTCTAAATATTTCTGATGAGATCTCTTACAAATTTCAATTGTCACTTATTATTATTATTAATTAATATCAAAGTACTATAGTAAGTTCATTTACTAATGTTCATGTACATGATGTGTTATGTGATGCATTCATTTCATGACAATGAAATCAAACAAGTCTAAGAAACCTATATGATAGTTTTCAGTCATATATTCCTTACTTTTTGTTCTTTTTCCTGTTATGATACTCATTCTGTCATATTGAAGGAAAAGACATTAAAGCATGACTTGATGTTCAAAGTACTCACACATATATGTGCTGAATTGGGATATATTTAATGGATCATATATATAGTATTAGACAATAATATACAACATTTTACTTTTTAATTTGTTAGAGCTAAAATGAAAAAGGGAAAAAAGAAAAAAAAGAAATGGCCTCACAACATGGAATTTAACCCTAGAAAAAATTTTTGTCAATGGGAGAACAAATTCAAAAATGTATTAAAAGATAGTATAACCATGCTCCTAAATGTAGGGATATATATTGGACCAACATGATGTATTTGTTTAATTTGCAATCAAGAAATTAAGGATTTACTCATTGTTATCACTTGTATTTGAGCCTCATTATCTTAATTTTATTTATATATTTGAGTTTGTTAAACACATAAGCTATTCATTGTTTTATTTATAAGTTCTTAAATAATTACATTTTTAGCATTTTCTTGTGATTTGGATCTATGAATATTATTTTAGTTGTATGAAATTGTTATTCATGAATTGATTGGTTGTTCCTTTGTTTTCCTTGAATCAGCATGCTCAAAACACTTGATAGGTACCAAAAGTGCAGCTATGGTGCAGTAGAAGTTAACAAACCTGCCAAAGAGCTTGAGGTATATAAAGCTATTGCTTTAATTTGTTTAACACACATGATTATAGCATTTTTCTCTATTCAAATAAACAACTTAATTAAGCATTTATAGGTGCTTATCATATACTACCTTCGTCCCTGGTTATAAGCCTCTTTGAAGAAAATTTTGTCCCTAAATATAAGCCATATGCAATTTAATATGTGCATATTTTTGTTTTCTCCAAACATACTCCTTATAAATACTACCAATTGATCTTCGAAAATGAAAACTTAAAGTTGACAAGGGGTATTTCAGAAAGATCCACACACTAAATAGACACATGAAATTCACTAATAATTTTGCATAATATATGTGAAAAAATTTAGAGGTCCTTAGAAAAATGGACGGATGAAGTAAGTGATTACGTATAAACTATTTTTATTAAAAAAAAGATAAAATAAAGTTAAAATAGTTTTTCATGTTAAATATAATTTGTTATCATAAGCTAACAACAATTTATAGAAATGTCATAAACTGCTTTTACAAGTGTGTCTTTTTTTGGTAGTGTATTTACAGGTGTGTCTAAACAGTCTCACAAATACTTTCGTCAATAGATAAACTTAAATAAGTCATTCCACGCATTTTTTTTCAACATCTCTTGAAAATTTCACTCAAGAAAAGTGTTATAAACTGCTATAGAACATTGAAAATATGCTTATGCATTGAAAAGTGTTATAAACTATTGTTATAGTTAATTTGTTATTGCTTTAGCAGAGCAGTTACCGTGAGTACTTGAAGCTGAAAGCAAGATTTGAATCTCTTCAAAGGACTCAAAGGTAAATATATTAACATGTGTGAGTGTAAATGTTCAAACTATATAATATATTTTTTTTGAAGTGTTTCATTAAGACCATGTCATTTTGTTCCTTAATTGCAGAAACCTTCTTGGTGAAGACTTAGGTCCATTAGGTACCAAAGATCTTGAGCAGCTTGAACGCCAACTTGATTCATCTCTCAAGCAAGTCAGGTCCACCAAGGTATTCAAATTTAGTGGTGTTTGCAAGTATTTAAGATGCATAAAGAAATTTTGTAAACTTAAACTTTCAACTTTAATTAATGCCATACTGTTCAATTAGTAAAATATAATTTCCTGAATAAAATATTTGATAAAACCCTAAGTTACAGTAAAATGTGAAATGCTTAACTATGTTAGTGACACAGTTTTGATCTTGAAAATGGTTAATATATCTGAAAACAAATGCTAATATTTCCTAGTCTGAAGTTTCCTTATGAATAGCTTATTATTACTTTTGAAAGTATATCAATAAATTGGTCTTTGTCTTTGTAATTCGGTTTCAAATTAGTCTCTGACTCTATTAATATTTCAAACTAGTCTATATCTTTGTTAAAAGTTTCTCATTTAGGTCCCTCGTCATGTGATAAAAACATAAAAAAGACCTAATTGAGAAAATTTTGACAAATACAGAGACTAATTTAAAATATTAATAGAGTCAGGGACTAATATGAGAATGACCTACAAAGACAGAGACCAATTTAGTGGTTTGTTCTTACTTCTTTTGATATCTAACATTATATGGAACATCAATTTGCAGACTCAATTCATGCTGGACCAATTAGCTGATCTTCAAAATAAGGTACATGGTGTTTGCATTACTACATAATAAAGCAACTTTAAATGTTCCTAACACATATAATCCATTTTTGTGTACATAGGAGCATATGTTGGTAGAAGCAAACAGATCTTTGTCTATGAAGGTAACATTCATCCATCATCCATGCCACTATTGTTCTTATGCATGGTTCTATTTCATAATATGATTGTGTACTTGTCTAAAGTACTTGGAACATTTAAAATACTATTGTGAATTCTTTTTGAAAAGGATAAATACTATTATGAATTGATTAATGTACCTTAAGACTAAAGTAACCTACTCTTACAATATAAGGACTATAATACTGATTTATGCCTATTCATTCATTCACATTAATAAGTCCTTGTGCTGATGATTTCATTAATTACTATTTTGTTTAAAGCTGGAAGAAATCAATATCAATTCCAGAAACCAGTATAGGCAAACATGGGAAGCTGGTGATCAAAGTATGGCATATGGTAATCAAAATGCTCATTCACAAAGCTTCTTTCAGCCTTTGGAGTGCAATCCAACATTGCAGATAGGGTAATAATCTATAAACCATTTTATTTTCTGTTGTTGCTAAAGCTGATTTGAATTAGGTTTAATTACTCTCTAGGTCCTAAACTATTTTAAATTTTTTAAATAGGTCACTGAATTAAAAAAAAAATTGTTGCCGGACCCCTAAATTTGTTATTGATTTGTAATTAGGTTCTTAAACTAATTTTTTTTAATTGAGTCTCTAAATTTTTAAATAATTTTTAAATAATTTATAACTATGTCGTTGAACTTACAGAACTTACAGACACAAACTCAAATTATTTAAAATTTTAAGGACCTACTTATAGTGCATGTTTGGAATCACAATAAGAACGACAAAATGACATTGTGATATTGTTGAAACTCTCGAGTGTAATTTTTGTCAAAATCACAGTGACTCACCGTGATTTTGGCTAACTTATCGGAAAATCAAACATGCACTTAAAAAATCTGAAATAGTTCAGATACCTATAAAATATATTGAATCTATAAATTATTAAATTCTAAGCCATTGTTCCTTGATACAGGACTGATTACAGGTACAGTCCTCCAGTAGCATCAGATCAGCTAACTGCAACAACTCAAGCTCAACAAGTTAATGGATTTATTCCTGGATGGATGCTTTGA
Protein sequence

>MS.gene018264.t1

MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSPSMLKTLDRYQKCSYGAVEVNKPAKELEQSSYREYLKLKARFESLQRTQRNLLGEDLGPLGTKDLEQLERQLDSSLKQVRSTKTQFMLDQLADLQNKEHMLVEANRSLSMKLEEININSRNQYRQTWEAGDQSMAYGNQNAHSQSFFQPLECNPTLQIGTDYRYSPPVASDQLTATTQAQQVNGFIPGWML