AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene018551


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene018551.t1 MTR_7g446520 78.632 234 32 1 1 234 92 307 4.51e-123 374
MS.gene018551.t1 MTR_7g446480 85.227 176 26 0 74 249 140 315 2.19e-102 320
MS.gene018551.t1 MTR_7g446510 84.659 176 27 0 74 249 155 330 1.17e-100 316
MS.gene018551.t1 MTR_7g446510 88.462 52 6 0 309 360 1 52 2.13e-25 108
MS.gene018551.t1 MTR_7g028855 85.714 140 20 0 1 140 124 263 3.51e-77 258
MS.gene018551.t1 MTR_1g070355 38.559 236 143 1 1 236 78 311 2.29e-46 175
MS.gene018551.t1 MTR_5g076070 33.040 227 148 2 3 228 59 282 6.57e-40 149
MS.gene018551.t1 MTR_6g051425 33.206 262 171 3 5 263 25 285 2.53e-39 149
MS.gene018551.t1 MTR_0645s0010 51.546 97 44 1 346 442 1 94 3.51e-25 101
MS.gene018551.t1 MTR_4g035820 30.924 249 160 6 3 244 81 324 1.35e-21 100
MS.gene018551.t1 MTR_0402s0040 34.270 178 105 4 1 173 30 200 1.29e-18 90.5
MS.gene018551.t1 MTR_6g022080 27.815 151 109 0 9 159 97 247 1.70e-18 86.3
MS.gene018551.t1 MTR_6g022070 32.624 141 95 0 301 441 34 174 1.77e-18 88.2
MS.gene018551.t1 MTR_3g450850 25.856 263 183 5 3 255 53 313 1.62e-17 85.5
MS.gene018551.t1 MTR_0558s0020 25.769 260 168 7 1 239 40 295 6.73e-17 82.8
MS.gene018551.t1 MTR_8g467420 53.226 62 28 1 1 61 82 143 2.85e-15 74.7
MS.gene018551.t1 MTR_8g468460 52.564 78 36 1 390 467 9 85 2.96e-15 72.8
MS.gene018551.t1 MTR_1g008290 32.031 128 82 2 65 192 18 140 5.15e-14 70.5
MS.gene018551.t1 MTR_0060s0090 38.462 78 48 0 2 79 61 138 4.91e-13 68.2
MS.gene018551.t1 MTR_2g098880 41.414 99 56 2 1 98 65 162 1.92e-12 68.6
MS.gene018551.t1 MTR_2g098880 41.414 99 56 2 1 98 77 174 2.32e-12 68.6
MS.gene018551.t1 MTR_3g448650 44.286 70 39 0 3 72 88 157 5.33e-12 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene018551.t1 AT4G38180 29.865 519 325 9 1 486 77 589 9.37e-72 252
MS.gene018551.t1 AT4G15090 29.713 488 304 8 1 454 55 537 2.71e-67 240
MS.gene018551.t1 AT4G15090 29.713 488 304 8 1 454 55 537 2.71e-67 240
MS.gene018551.t1 AT4G15090 29.713 488 304 8 1 454 55 537 2.71e-67 240
MS.gene018551.t1 AT4G15090 29.713 488 304 8 1 454 55 537 2.71e-67 240
MS.gene018551.t1 AT4G15090 29.713 488 304 8 1 454 55 537 2.71e-67 240
MS.gene018551.t1 AT3G22170 26.962 497 293 8 1 453 74 544 8.34e-55 204
MS.gene018551.t1 AT3G22170 26.962 497 293 8 1 453 74 544 8.34e-55 204
MS.gene018551.t1 AT1G76320 26.962 497 314 8 1 463 1 482 1.75e-50 190
MS.gene018551.t1 AT1G76320 26.962 497 314 8 1 463 1 482 2.06e-50 190
MS.gene018551.t1 AT1G76320 26.962 497 314 8 1 463 1 482 2.06e-50 190
MS.gene018551.t1 AT1G76320 26.962 497 314 8 1 463 1 482 2.26e-50 189
MS.gene018551.t1 AT1G10240 26.033 484 305 9 3 443 54 527 1.20e-47 181
MS.gene018551.t1 AT1G10240 26.033 484 305 9 3 443 54 527 1.20e-47 181
MS.gene018551.t1 AT3G06250 27.557 479 260 14 1 444 194 620 3.22e-44 172
MS.gene018551.t1 AT3G06250 27.557 479 260 14 1 444 194 620 3.22e-44 172
MS.gene018551.t1 AT3G06250 27.557 479 260 14 1 444 194 620 3.22e-44 172
MS.gene018551.t1 AT1G52520 27.477 535 315 15 1 491 89 594 9.48e-44 169
MS.gene018551.t1 AT1G80010 27.310 487 294 13 1 442 99 570 4.26e-43 168
MS.gene018551.t1 AT4G19990 24.797 492 284 8 2 447 26 477 8.83e-43 167
MS.gene018551.t1 AT4G19990 24.797 492 284 8 2 447 26 477 8.94e-43 167
MS.gene018551.t1 AT4G19990 24.797 492 284 8 2 447 26 477 8.94e-43 167
MS.gene018551.t1 AT4G19990 24.797 492 284 8 2 447 26 477 9.06e-43 167
MS.gene018551.t1 AT4G19990 24.797 492 284 8 2 447 26 477 9.06e-43 167
MS.gene018551.t1 AT4G19990 24.797 492 284 8 2 447 40 491 1.49e-42 167
MS.gene018551.t1 AT5G18960 25.314 478 275 13 1 444 215 644 4.76e-40 159
MS.gene018551.t1 AT5G18960 25.314 478 275 13 1 444 215 644 4.76e-40 159
MS.gene018551.t1 AT2G27110 25.400 500 306 13 1 467 53 518 4.80e-40 159
MS.gene018551.t1 AT2G27110 25.400 500 306 13 1 467 53 518 4.80e-40 159
MS.gene018551.t1 AT5G28530 25.050 499 315 11 3 452 61 549 1.05e-37 151
MS.gene018551.t1 AT4G38170 26.531 343 208 8 174 482 18 350 2.67e-37 148
MS.gene018551.t1 AT4G19990 24.882 422 243 6 60 447 39 420 3.65e-37 149
MS.gene018551.t1 AT5G28530 25.050 499 311 11 3 452 61 545 3.93e-37 149
MS.gene018551.t1 AT5G28530 25.050 499 311 11 3 452 61 545 3.93e-37 149
MS.gene018551.t1 AT2G27110 26.994 326 204 6 173 467 51 373 1.84e-36 147
MS.gene018551.t1 AT2G32250 19.760 501 323 7 1 469 42 495 4.81e-25 112
MS.gene018551.t1 AT2G32250 19.760 501 323 7 1 469 42 495 4.81e-25 112
MS.gene018551.t1 AT2G32250 19.760 501 323 7 1 469 42 495 5.04e-25 112
MS.gene018551.t1 AT2G32250 19.760 501 323 7 1 469 42 495 5.04e-25 112
MS.gene018551.t1 AT2G32250 19.760 501 323 7 1 469 42 495 5.04e-25 112
MS.gene018551.t1 AT2G32250 19.760 501 323 7 1 469 1 454 5.57e-25 112
MS.gene018551.t1 AT2G32250 19.760 501 323 7 1 469 1 454 7.32e-25 111
MS.gene018551.t1 AT2G32250 19.760 501 323 7 1 469 42 495 1.03e-24 110
MS.gene018551.t1 AT5G28530 22.314 484 284 13 3 452 61 486 7.10e-22 101
MS.gene018551.t1 AT5G28530 22.314 484 280 13 3 452 61 482 1.71e-21 100
MS.gene018551.t1 AT3G07500 41.748 103 56 3 1 102 37 136 3.41e-12 67.4

Find 169 sgRNAs with CRISPR-Local

Find 259 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCCTTCTCCCACGTCTTTC+TGG 0.095830 7.4:+10256058 None:intergenic
ATCCTGCTCCCACGTCTTTC+TGG 0.117062 7.4:+10255956 None:intergenic
GCAAGCACTGAGCATCTTTC+TGG 0.124164 7.4:-10256102 MS.gene018551:CDS
AGGATGAAATTGAAGAGTTT+TGG 0.190152 7.4:-10257176 MS.gene018551:CDS
AACGTTTGAAATGTCTATTT+TGG 0.234421 7.4:-10257596 MS.gene018551:CDS
CACTCACAAACAGTTATATT+TGG 0.234553 7.4:-10257456 MS.gene018551:CDS
GGGGACTTGGTGAGGGAAAA+TGG 0.236738 7.4:-10257153 MS.gene018551:CDS
AATAAGAACTTGTCATATAA+TGG 0.247315 7.4:-10257808 MS.gene018551:CDS
TGCATTTACACCCTGTTTAT+CGG 0.264525 7.4:-10257881 MS.gene018551:CDS
TGTTCACTACAGACCCAAAA+AGG 0.266221 7.4:-10257967 MS.gene018551:CDS
TTCTTTGTTCTCATATGTTT+TGG 0.278033 7.4:+10257107 None:intergenic
TTTCCTACTTTAGCTTGTTC+AGG 0.279784 7.4:+10255456 None:intergenic
CCATCTGTTACAACTGCTTT+TGG 0.282718 7.4:+10257351 None:intergenic
CCTGAAGTTCCAATTGTTAC+TGG 0.294336 7.4:-10256366 MS.gene018551:CDS
ATCCTTCTCCCACGTCTCTT+TGG 0.296957 7.4:+10256160 None:intergenic
ACTTAACATTCAGATAGTTT+AGG 0.298701 7.4:+10257667 None:intergenic
TTTGTTGCGTTGGACGAAAA+AGG 0.308114 7.4:-10256571 MS.gene018551:CDS
AGACGTGGCAGGAGGATTAA+AGG 0.308394 7.4:-10255665 MS.gene018551:CDS
CTTAACATTCAGATAGTTTA+GGG 0.312093 7.4:+10257668 None:intergenic
TTGCAGGGAAGTGTCCAAAA+AGG 0.313369 7.4:-10256448 MS.gene018551:intron
CCAGTAACAATTGGAACTTC+AGG 0.318979 7.4:+10256366 None:intergenic
TTCTATGAGGGAGGCGATAA+AGG 0.334895 7.4:-10257322 MS.gene018551:CDS
CTGTTAGGAAGAGTGATATT+AGG 0.340554 7.4:-10258130 MS.gene018551:CDS
CGCAACAAAATCAAACATTC+TGG 0.341835 7.4:+10256585 None:intergenic
TCCCATACAATCTAGAAAAC+TGG 0.344570 7.4:+10257383 None:intergenic
CGCGTGGTGAGGCACCTGTT+AGG 0.362850 7.4:-10255416 MS.gene018551:CDS
AAGAGTTATGTTAGGAAGAA+AGG 0.363884 7.4:-10257000 MS.gene018551:CDS
CATTGGTTGGAGTAGGTTCA+TGG 0.364482 7.4:+10257907 None:intergenic
TGCTCCAAAGAAGAATAAAA+AGG 0.367722 7.4:-10256292 MS.gene018551:CDS
TGGCTAGCATGCTGAGACAT+TGG 0.368552 7.4:+10256078 None:intergenic
CCCACGTCTCTTTGGCTATC+GGG 0.373225 7.4:+10256168 None:intergenic
AGATCAGATTATTTCTGCTT+TGG 0.376852 7.4:-10257558 MS.gene018551:CDS
AGTCTCCTTGATGCCCTAAC+AGG 0.395341 7.4:+10255402 None:intergenic
GTTGAGTTTCCAGTAACAAT+TGG 0.399158 7.4:+10256357 None:intergenic
TCCCACGTCTCTTTGGCTAT+CGG 0.401616 7.4:+10256167 None:intergenic
ATAAGAACTTGTCATATAAT+GGG 0.403187 7.4:-10257807 MS.gene018551:CDS
AGCATTTATCAAGGTTAGAT+AGG 0.409294 7.4:-10258040 MS.gene018551:CDS
CAAGCACTGAGCATCTTTCT+GGG 0.411830 7.4:-10256101 MS.gene018551:CDS
AAGCTAAAGTAGGAAAGAAA+TGG 0.427126 7.4:-10255449 MS.gene018551:CDS
AGAATATTCACAAAAGGAAT+GGG 0.428048 7.4:+10257632 None:intergenic
TATAAGTACGGTAAGTGTAA+TGG 0.430620 7.4:-10258158 MS.gene018551:CDS
GGATGACATACAAAAGCTTC+GGG 0.433073 7.4:-10256403 MS.gene018551:CDS
GGAGCACCTTTGCACTTCAC+TGG 0.435097 7.4:+10256309 None:intergenic
CAGTAACAATTGGAACTTCA+GGG 0.439435 7.4:+10256367 None:intergenic
ATTGTCCATTGTCGCGACTT+TGG 0.441128 7.4:+10255280 None:intergenic
TGGCTAGCATGCTGAGACAT+GGG 0.445822 7.4:+10255874 None:intergenic
CGAGGCTGCTGAAATCTATA+CGG 0.448201 7.4:-10256848 MS.gene018551:CDS
GATATTAGGCGCAATGTTAA+CGG 0.449906 7.4:-10258116 MS.gene018551:CDS
AAATCATAAAGAGTTATGTT+AGG 0.452282 7.4:-10257008 MS.gene018551:CDS
TACGTGCGTGACGATTTCTT+TGG 0.453713 7.4:-10257069 MS.gene018551:CDS
AGTTATATTTGGCGCTGCAT+TGG 0.459778 7.4:-10257445 MS.gene018551:CDS
ACAAAATCACCAACGGATAG+TGG 0.461754 7.4:+10257493 None:intergenic
TGGATGACATACAAAAGCTT+CGG 0.464217 7.4:-10256404 MS.gene018551:CDS
GGGATACATGGTGGCTCAGA+AGG 0.464555 7.4:-10257787 MS.gene018551:CDS
TGGCTAGCATGCTGAGACAT+GGG 0.464703 7.4:+10255976 None:intergenic
TAGTGAACACGGAGCCTAGC+TGG 0.466097 7.4:+10257981 None:intergenic
GAGATAAGAAGCATTTATCA+AGG 0.475640 7.4:-10258049 MS.gene018551:CDS
TTGGCTATCGGGCTGAGACA+TGG 0.475904 7.4:+10256179 None:intergenic
CAGAATATTCACAAAAGGAA+TGG 0.476913 7.4:+10257631 None:intergenic
AGACGTGGGAGCAGGATCAA+AGG 0.477291 7.4:-10255950 MS.gene018551:CDS
GTAGATAAAGCACAGATTGA+TGG 0.478198 7.4:-10257846 MS.gene018551:CDS
GACGTGGCAGGAGGATTAAA+GGG 0.486674 7.4:-10255664 MS.gene018551:CDS
CAGCACAGGGGATGAAAACC+TGG 0.488423 7.4:+10256897 None:intergenic
CTGGCTAGCATGCTGAGACA+TGG 0.489602 7.4:+10255975 None:intergenic
CGCAGATGAGTTGTCAGCAC+AGG 0.491267 7.4:+10256883 None:intergenic
GCGTGGTGAGGCACCTGTTA+GGG 0.491694 7.4:-10255415 MS.gene018551:CDS
TTGGCTAGCATGCTGAGACA+TGG 0.494151 7.4:+10255873 None:intergenic
AAGGGTGGATATCCCGGTGT+TGG 0.494812 7.4:-10257768 MS.gene018551:CDS
GAAGATATTCAAGCTGGGTC+GGG 0.494884 7.4:-10255113 MS.gene018551:CDS
AGACGTGGGAGAAGGATCAA+AGG 0.494945 7.4:-10256052 MS.gene018551:CDS
AGACGTGGGAGAAGGATCAA+AGG 0.494945 7.4:-10256154 MS.gene018551:CDS
CAAACATTCTGGAATGTGTT+CGG 0.497818 7.4:+10256596 None:intergenic
AGGGTGGATATCCCGGTGTT+GGG 0.498763 7.4:-10257767 MS.gene018551:CDS
TAGCTTGTATGCTGATGTGC+TGG 0.499229 7.4:-10256424 MS.gene018551:CDS
ATCACATTCACAGTAGGTTC+AGG 0.499460 7.4:+10255083 None:intergenic
GTGCGTGACGATTTCTTTGG+TGG 0.499699 7.4:-10257066 MS.gene018551:CDS
GCAGTATGTATGCAACAAGC+AGG 0.502107 7.4:-10258078 MS.gene018551:CDS
ATTTGGCGCTGCATTGGTGA+TGG 0.502496 7.4:-10257439 MS.gene018551:CDS
GTGTAGGAAGATATTCAAGC+TGG 0.502504 7.4:-10255119 MS.gene018551:intron
GGTACTTACGTTCATATTCA+CGG 0.502731 7.4:+10255603 None:intergenic
TGGCTATCGGGCTGAGACAT+GGG 0.505485 7.4:+10256180 None:intergenic
CCTTTGCACTTCACTGGCAA+TGG 0.506348 7.4:+10256315 None:intergenic
GACGTGGGAGCAGGATCAAA+GGG 0.507704 7.4:-10255949 MS.gene018551:CDS
AGCCAGAAAGACGTGGGAGC+AGG 0.508124 7.4:-10255958 MS.gene018551:CDS
ATATGAGAACAAAGAATTGT+GGG 0.511340 7.4:-10257100 MS.gene018551:CDS
ATTCAAGCTGGGTCGGGAAG+CGG 0.513307 7.4:-10255107 MS.gene018551:CDS
AGTGGCAGAATATTCACAAA+AGG 0.514210 7.4:+10257626 None:intergenic
GCTCAGAAGGGTGGATATCC+CGG 0.515458 7.4:-10257774 MS.gene018551:CDS
GAAGAAGATGATAATGTGTC+AGG 0.520481 7.4:-10255254 MS.gene018551:CDS
GACGTGGGAGGAGGATCAAA+GGG 0.523575 7.4:-10255847 MS.gene018551:CDS
GACGTGGGAGAAGGATCAAA+GGG 0.526228 7.4:-10256153 MS.gene018551:CDS
TAGGGCATCAAGGAGACTAA+TGG 0.526483 7.4:-10255397 MS.gene018551:CDS
ATGGAATTGAGAACAATCCA+TGG 0.534401 7.4:-10257134 MS.gene018551:CDS
CAGATGGTGACGGTTCTATG+AGG 0.536155 7.4:-10257335 MS.gene018551:CDS
GGAAGATATTCAAGCTGGGT+CGG 0.536191 7.4:-10255114 MS.gene018551:CDS
ATTCCTGAACAAGCTAAAGT+AGG 0.547544 7.4:-10255459 MS.gene018551:CDS
GTGAAAGAAGAAATTATGAA+AGG 0.548916 7.4:-10256808 MS.gene018551:CDS
AGACGTGGGAGGAGGATCAA+AGG 0.549459 7.4:-10255848 MS.gene018551:CDS
AAGTCACATTCAACGACGTA+AGG 0.551272 7.4:+10255019 None:intergenic
CATATGAGAACAAAGAATTG+TGG 0.552735 7.4:-10257101 MS.gene018551:CDS
TTGTCATATAATGGGATACA+TGG 0.555297 7.4:-10257799 MS.gene018551:CDS
AAACAATAGACACTTATATG+TGG 0.556264 7.4:-10257413 MS.gene018551:CDS
AGCCAAAGAGACGTGGGAGA+AGG 0.560631 7.4:-10256162 MS.gene018551:CDS
TTCTTAGTGAACCCAACACC+GGG 0.562418 7.4:+10257756 None:intergenic
GACGTGGGAGAAGGATCAAA+GGG 0.564696 7.4:-10256051 MS.gene018551:CDS
TGTAAATGCACAGCATTGGT+TGG 0.565762 7.4:+10257894 None:intergenic
AGCCAGAAAGACGTGGGAGA+AGG 0.570261 7.4:-10256060 MS.gene018551:CDS
ACTTTCATCACATTCACAGT+AGG 0.571795 7.4:+10255077 None:intergenic
TACATGGTGGCTCAGAAGGG+TGG 0.573659 7.4:-10257783 MS.gene018551:CDS
GCAGATGAGTTGTCAGCACA+GGG 0.575960 7.4:+10256884 None:intergenic
TAGTCAAAGCGAGGTTGTCA+AGG 0.577221 7.4:-10255638 MS.gene018551:CDS
AGGCACCTGTTAGGGCATCA+AGG 0.577424 7.4:-10255407 MS.gene018551:CDS
AGAAAGATGCTCAGTGCTTG+CGG 0.581054 7.4:+10256104 None:intergenic
ACTCTGTCATCTTCGTTAGA+CGG 0.581881 7.4:+10255224 None:intergenic
TTTCAAACGTTCGTCATCAG+TGG 0.583531 7.4:+10257608 None:intergenic
AGGGTGTAAATGCACAGCAT+TGG 0.584309 7.4:+10257890 None:intergenic
CAGTATGTATGCAACAAGCA+GGG 0.584535 7.4:-10258077 MS.gene018551:CDS
GGAGGCCAAAGTCGCGACAA+TGG 0.586115 7.4:-10255285 MS.gene018551:intron
GCCCGATAGCCAAAGAGACG+TGG 0.586320 7.4:-10256169 MS.gene018551:CDS
TTATTTCTGCTTTGGCGATG+TGG 0.587488 7.4:-10257550 MS.gene018551:CDS
AAAGGAATGGGGATCAGTTG+AGG 0.588574 7.4:+10257644 None:intergenic
CCAAAAGCAGTTGTAACAGA+TGG 0.588696 7.4:-10257351 MS.gene018551:CDS
GCATGCTAGCCAGAAAGACG+TGG 0.591586 7.4:-10255965 MS.gene018551:CDS
GCATGCTAGCCAGAAAGACG+TGG 0.591586 7.4:-10256067 MS.gene018551:CDS
ATGCGTGCTGTTATTAAGGA+TGG 0.593265 7.4:-10257705 MS.gene018551:CDS
TTTCTTAGTGAACCCAACAC+CGG 0.593472 7.4:+10257755 None:intergenic
GTTGACAAAATATCTTGAGG+AGG 0.598346 7.4:-10256731 MS.gene018551:CDS
AACAATAGACACTTATATGT+GGG 0.603700 7.4:-10257412 MS.gene018551:CDS
GGATACATGGTGGCTCAGAA+GGG 0.612576 7.4:-10257786 MS.gene018551:CDS
AATCTGTGCTTTATCTACCT+CGG 0.613894 7.4:+10257851 None:intergenic
CTGGCAATGGATCACGTATG+TGG 0.614693 7.4:+10256328 None:intergenic
TGTAGGAAGATATTCAAGCT+GGG 0.617274 7.4:-10255118 MS.gene018551:intron
TCTGCGTTGTCTTGAACGCG+AGG 0.617404 7.4:-10256866 MS.gene018551:CDS
GTAAGAAAATGTTCAAACTG+TGG 0.620533 7.4:-10256258 MS.gene018551:CDS
GAAAAGAAGAACGCGTGGTG+AGG 0.623117 7.4:-10255427 MS.gene018551:CDS
AGATGGTGACGGTTCTATGA+GGG 0.626993 7.4:-10257334 MS.gene018551:CDS
TGGAATTGAGAACAATCCAT+GGG 0.627348 7.4:-10257133 MS.gene018551:CDS
AGTATGTATGCAACAAGCAG+GGG 0.634341 7.4:-10258076 MS.gene018551:CDS
TTGACAAAATATCTTGAGGA+GGG 0.634347 7.4:-10256730 MS.gene018551:intron
TGCACAGCATTGGTTGGAGT+AGG 0.638605 7.4:+10257900 None:intergenic
TGTTACTGGAAACTCAACAA+TGG 0.640006 7.4:-10256352 MS.gene018551:CDS
CCCGATAGCCAAAGAGACGT+GGG 0.644492 7.4:-10256168 MS.gene018551:CDS
GAACAAATACCACTATCCGT+TGG 0.644673 7.4:-10257502 MS.gene018551:CDS
CTCGTACAAAGTGTCCAGCT+AGG 0.644688 7.4:-10257995 MS.gene018551:CDS
GAAGTTGACAAAATATCTTG+AGG 0.651334 7.4:-10256734 MS.gene018551:CDS
CAAATATAACTGTTTGTGAG+TGG 0.653208 7.4:+10257457 None:intergenic
GAATATTCACAAAAGGAATG+GGG 0.656506 7.4:+10257633 None:intergenic
TGGTGACGGTTCTATGAGGG+AGG 0.661344 7.4:-10257331 MS.gene018551:CDS
TATGAGGGAGGCGATAAAGG+CGG 0.662119 7.4:-10257319 MS.gene018551:CDS
AAATGGAAAAGAAGAACGCG+TGG 0.665885 7.4:-10255432 MS.gene018551:CDS
TCATATAATGGGATACATGG+TGG 0.669224 7.4:-10257796 MS.gene018551:CDS
CAAAGGGAGGCAAATCAAAG+AGG 0.670795 7.4:-10256137 MS.gene018551:CDS
CAGCCAGACAAAATCACCAA+CGG 0.675882 7.4:+10257486 None:intergenic
TTAACGGTGAGATTGTAATG+AGG 0.680367 7.4:-10258100 MS.gene018551:CDS
AGGTGTTGCACTGAGTGTGA+AGG 0.686205 7.4:-10256788 MS.gene018551:CDS
GCAGTTGTAACAGATGGTGA+CGG 0.686599 7.4:-10257345 MS.gene018551:CDS
CATGCTAGCCAGAAAGACGT+GGG 0.690224 7.4:-10255964 MS.gene018551:CDS
AAAGGGAGGTAGTCAAAGCG+AGG 0.690394 7.4:-10255647 MS.gene018551:CDS
GGATAAGAACATTGACAGTG+AGG 0.691214 7.4:-10255493 MS.gene018551:CDS
CCATTGCCAGTGAAGTGCAA+AGG 0.692298 7.4:-10256315 MS.gene018551:CDS
CATGCTAGCCAGAAAGACGT+GGG 0.697336 7.4:-10256066 MS.gene018551:CDS
GTGGCAGGAGGATTAAAGGG+AGG 0.699976 7.4:-10255661 MS.gene018551:CDS
TGATGCCAGAAAATGTTCCG+CGG 0.704411 7.4:-10256223 MS.gene018551:CDS
TGTTTATCGGAAAATATCCG+AGG 0.704996 7.4:-10257868 MS.gene018551:CDS
GTGGGAGAAGGATCAAAGGG+AGG 0.706029 7.4:-10256150 MS.gene018551:CDS
ATTGATGGTCTTCAGTCACA+CGG 0.708259 7.4:-10257831 MS.gene018551:CDS
GTGGGAGGAGGATCAAAGGG+AGG 0.710691 7.4:-10255844 MS.gene018551:CDS
GTGGGAGCAGGATCAAAGGG+AGG 0.712846 7.4:-10255946 MS.gene018551:CDS
CAGATGAGTTGTCAGCACAG+GGG 0.773409 7.4:+10256885 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAAAAACAACATATATG+AGG + chr7.4:10257895-10257914 None:intergenic 15.0%
!!! TACGATTTTTATTATAAGTA+CGG - chr7.4:10255055-10255074 MS.gene018551:CDS 15.0%
!! AAATCATAAAGAGTTATGTT+AGG - chr7.4:10256217-10256236 MS.gene018551:CDS 20.0%
!! AAATTGAGAAGTTAATCAAA+AGG + chr7.4:10257706-10257725 None:intergenic 20.0%
!! AATAAGAACTTGTCATATAA+TGG - chr7.4:10255417-10255436 MS.gene018551:CDS 20.0%
!! ATAAGAACTTGTCATATAAT+GGG - chr7.4:10255418-10255437 MS.gene018551:CDS 20.0%
!! CTTCAACACAAAAAAAATAT+GGG + chr7.4:10256599-10256618 None:intergenic 20.0%
!!! ACATGGATAATTTTTGATTT+CGG - chr7.4:10257919-10257938 MS.gene018551:CDS 20.0%
!!! GTTGTTTTTTAATGTTAACA+TGG - chr7.4:10257902-10257921 MS.gene018551:CDS 20.0%
!!! TTGATTAACTTCTCAATTTT+TGG - chr7.4:10257707-10257726 MS.gene018551:CDS 20.0%
! AAACAATAGACACTTATATG+TGG - chr7.4:10255812-10255831 MS.gene018551:CDS 25.0%
! AACAATAGACACTTATATGT+GGG - chr7.4:10255813-10255832 MS.gene018551:CDS 25.0%
! ACTTAACATTCAGATAGTTT+AGG + chr7.4:10255561-10255580 None:intergenic 25.0%
! AGAATATTCACAAAAGGAAT+GGG + chr7.4:10255596-10255615 None:intergenic 25.0%
! ATATATGAGGTCAAGAATAT+GGG + chr7.4:10257882-10257901 None:intergenic 25.0%
! ATATGAGAACAAAGAATTGT+GGG - chr7.4:10256125-10256144 MS.gene018551:CDS 25.0%
! CCAACAATGTGTTTAAATAT+AGG - chr7.4:10257643-10257662 MS.gene018551:CDS 25.0%
! CCTATATTTAAACACATTGT+TGG + chr7.4:10257646-10257665 None:intergenic 25.0%
! CCTTCAACACAAAAAAAATA+TGG + chr7.4:10256600-10256619 None:intergenic 25.0%
! CTTAACATTCAGATAGTTTA+GGG + chr7.4:10255560-10255579 None:intergenic 25.0%
! GTGAAAGAAGAAATTATGAA+AGG - chr7.4:10256417-10256436 MS.gene018551:CDS 25.0%
!! AGCAATGTACTCTAATTTTA+CGG - chr7.4:10256026-10256045 MS.gene018551:CDS 25.0%
!! ATGTGTTTACAAATTTTTGC+AGG - chr7.4:10256761-10256780 MS.gene018551:CDS 25.0%
!! GAACATTTTCTTACAAACTT+TGG + chr7.4:10256961-10256980 None:intergenic 25.0%
!! TGTGTTTACAAATTTTTGCA+GGG - chr7.4:10256762-10256781 MS.gene018551:CDS 25.0%
!! TTCTTTGTTCTCATATGTTT+TGG + chr7.4:10256121-10256140 None:intergenic 25.0%
!!! AACGTTTGAAATGTCTATTT+TGG - chr7.4:10255629-10255648 MS.gene018551:CDS 25.0%
!!! ACGTTTGAAATGTCTATTTT+GGG - chr7.4:10255630-10255649 MS.gene018551:CDS 25.0%
!!! CCATATTTTTTTTGTGTTGA+AGG - chr7.4:10256597-10256616 MS.gene018551:CDS 25.0%
AAGAGTTATGTTAGGAAGAA+AGG - chr7.4:10256225-10256244 MS.gene018551:CDS 30.0%
AAGCTAAAGTAGGAAAGAAA+TGG - chr7.4:10257776-10257795 MS.gene018551:CDS 30.0%
ACAAAAAAAATATGGGAGCA+TGG + chr7.4:10256592-10256611 None:intergenic 30.0%
AGCATTTATCAAGGTTAGAT+AGG - chr7.4:10255185-10255204 MS.gene018551:intron 30.0%
ATATTACTTGTGCAGTAAGT+AGG + chr7.4:10257680-10257699 None:intergenic 30.0%
ATTACGTTTAGACTCAACAT+TGG + chr7.4:10258047-10258066 None:intergenic 30.0%
CAAATATAACTGTTTGTGAG+TGG + chr7.4:10255771-10255790 None:intergenic 30.0%
CACTCACAAACAGTTATATT+TGG - chr7.4:10255769-10255788 MS.gene018551:intron 30.0%
CAGAATATTCACAAAAGGAA+TGG + chr7.4:10255597-10255616 None:intergenic 30.0%
CATATATGAGGTCAAGAATA+TGG + chr7.4:10257883-10257902 None:intergenic 30.0%
CATATGAGAACAAAGAATTG+TGG - chr7.4:10256124-10256143 MS.gene018551:CDS 30.0%
GAAGTTGACAAAATATCTTG+AGG - chr7.4:10256491-10256510 MS.gene018551:intron 30.0%
GAATATTCACAAAAGGAATG+GGG + chr7.4:10255595-10255614 None:intergenic 30.0%
GTAAGAAAATGTTCAAACTG+TGG - chr7.4:10256967-10256986 MS.gene018551:CDS 30.0%
TATAAGTACGGTAAGTGTAA+TGG - chr7.4:10255067-10255086 MS.gene018551:CDS 30.0%
TGCTCCAAAGAAGAATAAAA+AGG - chr7.4:10256933-10256952 MS.gene018551:CDS 30.0%
TTCCAAAAAAGCTGAATTCT+TGG + chr7.4:10255995-10256014 None:intergenic 30.0%
TTGACAAAATATCTTGAGGA+GGG - chr7.4:10256495-10256514 MS.gene018551:intron 30.0%
! AAAAATGCGTGCTGTTATTA+AGG - chr7.4:10255516-10255535 MS.gene018551:intron 30.0%
! AATGTACTCTAATTTTACGG+AGG - chr7.4:10256029-10256048 MS.gene018551:CDS 30.0%
! ACAACATATCTACCCTTTTT+GGG + chr7.4:10255274-10255293 None:intergenic 30.0%
! ACCAGTTTTCTAGATTGTAT+GGG - chr7.4:10255841-10255860 MS.gene018551:CDS 30.0%
! AGGATGAAATTGAAGAGTTT+TGG - chr7.4:10256049-10256068 MS.gene018551:CDS 30.0%
! CAGAACATGTCTTTTTCTTT+GGG + chr7.4:10257512-10257531 None:intergenic 30.0%
! GATGAAATTGAAGAGTTTTG+GGG - chr7.4:10256051-10256070 MS.gene018551:CDS 30.0%
! GGATGAAATTGAAGAGTTTT+GGG - chr7.4:10256050-10256069 MS.gene018551:CDS 30.0%
! TTGTCATATAATGGGATACA+TGG - chr7.4:10255426-10255445 MS.gene018551:CDS 30.0%
!! AAGTCAAAAGCATTTCTCAT+TGG + chr7.4:10258080-10258099 None:intergenic 30.0%
!! AATGTTTGATTTTGTTGCGT+TGG - chr7.4:10256644-10256663 MS.gene018551:intron 30.0%
!! AGATCAGATTATTTCTGCTT+TGG - chr7.4:10255667-10255686 MS.gene018551:CDS 30.0%
!! ATGAAATTGAAGAGTTTTGG+GGG - chr7.4:10256052-10256071 MS.gene018551:CDS 30.0%
!! GAGATAAGAAGCATTTATCA+AGG - chr7.4:10255176-10255195 MS.gene018551:intron 30.0%
!! TTGTAGCTGATTTTAAATCC+AGG - chr7.4:10256310-10256329 MS.gene018551:CDS 30.0%
!!! AAGAATTCAGCTTTTTTGGA+AGG - chr7.4:10255994-10256013 MS.gene018551:CDS 30.0%
!!! GTTGTGTCTATTTTTGAAGA+GGG - chr7.4:10255289-10255308 MS.gene018551:intron 30.0%
!!! TGGATAATTTTTGATTTCGG+AGG - chr7.4:10257922-10257941 MS.gene018551:CDS 30.0%
!!! TGTTGTGTCTATTTTTGAAG+AGG - chr7.4:10255288-10255307 MS.gene018551:intron 30.0%
!!! TTAACTTCTCAATTTTTGGC+AGG - chr7.4:10257711-10257730 MS.gene018551:CDS 30.0%
AATCTGTGCTTTATCTACCT+CGG + chr7.4:10255377-10255396 None:intergenic 35.0%
ACTTTCATCACATTCACAGT+AGG + chr7.4:10258151-10258170 None:intergenic 35.0%
AGTGGCAGAATATTCACAAA+AGG + chr7.4:10255602-10255621 None:intergenic 35.0%
ATGGAATTGAGAACAATCCA+TGG - chr7.4:10256091-10256110 MS.gene018551:CDS 35.0%
ATTCCTGAACAAGCTAAAGT+AGG - chr7.4:10257766-10257785 MS.gene018551:CDS 35.0%
CAGTAACAATTGGAACTTCA+GGG + chr7.4:10256861-10256880 None:intergenic 35.0%
CGCAACAAAATCAAACATTC+TGG + chr7.4:10256643-10256662 None:intergenic 35.0%
CTGTTAGGAAGAGTGATATT+AGG - chr7.4:10255095-10255114 MS.gene018551:CDS 35.0%
GATATTAGGCGCAATGTTAA+CGG - chr7.4:10255109-10255128 MS.gene018551:CDS 35.0%
GGTACTTACGTTCATATTCA+CGG + chr7.4:10257625-10257644 None:intergenic 35.0%
GTAGATAAAGCACAGATTGA+TGG - chr7.4:10255379-10255398 MS.gene018551:intron 35.0%
GTGAAGGAAAAAGAAGTGAA+TGG - chr7.4:10256453-10256472 MS.gene018551:intron 35.0%
GTTGACAAAATATCTTGAGG+AGG - chr7.4:10256494-10256513 MS.gene018551:intron 35.0%
GTTGAGTTTCCAGTAACAAT+TGG + chr7.4:10256871-10256890 None:intergenic 35.0%
TCCCATACAATCTAGAAAAC+TGG + chr7.4:10255845-10255864 None:intergenic 35.0%
TGCATTTACACCCTGTTTAT+CGG - chr7.4:10255344-10255363 MS.gene018551:intron 35.0%
TGGAATTGAGAACAATCCAT+GGG - chr7.4:10256092-10256111 MS.gene018551:CDS 35.0%
TGGATGACATACAAAAGCTT+CGG - chr7.4:10256821-10256840 MS.gene018551:CDS 35.0%
TGTAGGAAGATATTCAAGCT+GGG - chr7.4:10258107-10258126 MS.gene018551:CDS 35.0%
TGTTACTGGAAACTCAACAA+TGG - chr7.4:10256873-10256892 MS.gene018551:CDS 35.0%
TGTTTATCGGAAAATATCCG+AGG - chr7.4:10255357-10255376 MS.gene018551:intron 35.0%
TTAACGGTGAGATTGTAATG+AGG - chr7.4:10255125-10255144 MS.gene018551:intron 35.0%
! AAAGCATTTCTCATTGGACT+GGG + chr7.4:10258074-10258093 None:intergenic 35.0%
! CACAACATATCTACCCTTTT+TGG + chr7.4:10255275-10255294 None:intergenic 35.0%
! CAGCACATGTCTTTTTCTTT+GGG + chr7.4:10257308-10257327 None:intergenic 35.0%
! CGGATATTTTCCGATAAACA+GGG + chr7.4:10255357-10255376 None:intergenic 35.0%
! GAAGAAGATGATAATGTGTC+AGG - chr7.4:10257971-10257990 MS.gene018551:CDS 35.0%
! GACCAGTTTTCTAGATTGTA+TGG - chr7.4:10255840-10255859 MS.gene018551:CDS 35.0%
! GCAGAACATGTCTTTTTCTT+TGG + chr7.4:10257513-10257532 None:intergenic 35.0%
! GGAAGTAGATTCTAAGTTGA+TGG - chr7.4:10256711-10256730 MS.gene018551:intron 35.0%
! GGTGCCTTTTTATTCTTCTT+TGG + chr7.4:10256940-10256959 None:intergenic 35.0%
! TCATATAATGGGATACATGG+TGG - chr7.4:10255429-10255448 MS.gene018551:CDS 35.0%
! TCGGATATTTTCCGATAAAC+AGG + chr7.4:10255358-10255377 None:intergenic 35.0%
! TCTTGAATGTGGACTATTGT+GGG - chr7.4:10256689-10256708 MS.gene018551:intron 35.0%
! TTCTTGAATGTGGACTATTG+TGG - chr7.4:10256688-10256707 MS.gene018551:intron 35.0%
!! AAAAGCATTTCTCATTGGAC+TGG + chr7.4:10258075-10258094 None:intergenic 35.0%
!! AAATGTCTATTTTGGGCAGA+TGG - chr7.4:10255637-10255656 MS.gene018551:CDS 35.0%
!! ATTTCTGCACAATTTTGACG+AGG - chr7.4:10256260-10256279 MS.gene018551:CDS 35.0%
!! CAAACATTCTGGAATGTGTT+CGG + chr7.4:10256632-10256651 None:intergenic 35.0%
!! GAAGATTGGTTTCTTGAATG+TGG - chr7.4:10256678-10256697 MS.gene018551:intron 35.0%
!! TTTCCTACTTTAGCTTGTTC+AGG + chr7.4:10257772-10257791 None:intergenic 35.0%
!!! AGTGTAATGGTTTTGCTGTT+AGG - chr7.4:10255080-10255099 MS.gene018551:CDS 35.0%
!!! CTTTTGACTTGTGTTTGTGT+AGG - chr7.4:10258090-10258109 MS.gene018551:CDS 35.0%
!!! TCATATGTTTTGGTAACCCA+TGG + chr7.4:10256111-10256130 None:intergenic 35.0%
!!! TGAAATTGAAGAGTTTTGGG+GGG - chr7.4:10256053-10256072 MS.gene018551:CDS 35.0%
!!! TGCCAAGAATTCAGCTTTTT+TGG - chr7.4:10255990-10256009 MS.gene018551:CDS 35.0%
AAAAAGACATTCAGTGTCCG+CGG + chr7.4:10257022-10257041 None:intergenic 40.0%
AAATGGAAAAGAAGAACGCG+TGG - chr7.4:10257793-10257812 MS.gene018551:CDS 40.0%
ACAAAATCACCAACGGATAG+TGG + chr7.4:10255735-10255754 None:intergenic 40.0%
ACTCTGTCATCTTCGTTAGA+CGG + chr7.4:10258004-10258023 None:intergenic 40.0%
AGTATGTATGCAACAAGCAG+GGG - chr7.4:10255149-10255168 MS.gene018551:intron 40.0%
AGTTATATTTGGCGCTGCAT+TGG - chr7.4:10255780-10255799 MS.gene018551:intron 40.0%
ATCACATTCACAGTAGGTTC+AGG + chr7.4:10258145-10258164 None:intergenic 40.0%
CAGGAAATTTGAATCTCGAG+GGG - chr7.4:10256564-10256583 MS.gene018551:CDS 40.0%
CAGTATGTATGCAACAAGCA+GGG - chr7.4:10255148-10255167 MS.gene018551:intron 40.0%
CATGCTAGCTAAAAAGACGT+GGG - chr7.4:10257465-10257484 MS.gene018551:CDS 40.0%
CCAAAAGCAGTTGTAACAGA+TGG - chr7.4:10255874-10255893 MS.gene018551:CDS 40.0%
CCAGTAACAATTGGAACTTC+AGG + chr7.4:10256862-10256881 None:intergenic 40.0%
CCTGAAGTTCCAATTGTTAC+TGG - chr7.4:10256859-10256878 MS.gene018551:CDS 40.0%
GAACAAATACCACTATCCGT+TGG - chr7.4:10255723-10255742 MS.gene018551:intron 40.0%
GCAGGAAATTTGAATCTCGA+GGG - chr7.4:10256563-10256582 MS.gene018551:CDS 40.0%
GCATCTGAACAAGAATGCTA+TGG - chr7.4:10255963-10255982 MS.gene018551:CDS 40.0%
GGATAAGAACATTGACAGTG+AGG - chr7.4:10257732-10257751 MS.gene018551:CDS 40.0%
GGATGACATACAAAAGCTTC+GGG - chr7.4:10256822-10256841 MS.gene018551:CDS 40.0%
GTGTAGGAAGATATTCAAGC+TGG - chr7.4:10258106-10258125 MS.gene018551:CDS 40.0%
GTTCACTACAGACCCAAAAA+GGG - chr7.4:10255259-10255278 MS.gene018551:CDS 40.0%
TGCAGGAAATTTGAATCTCG+AGG - chr7.4:10256562-10256581 MS.gene018551:CDS 40.0%
TGTTCACTACAGACCCAAAA+AGG - chr7.4:10255258-10255277 MS.gene018551:CDS 40.0%
TTGATGGAGATTGCTCGATA+TGG - chr7.4:10256727-10256746 MS.gene018551:intron 40.0%
TTTCAAACGTTCGTCATCAG+TGG + chr7.4:10255620-10255639 None:intergenic 40.0%
TTTCTTAGTGAACCCAACAC+CGG + chr7.4:10255473-10255492 None:intergenic 40.0%
TTTGTTGCGTTGGACGAAAA+AGG - chr7.4:10256654-10256673 MS.gene018551:intron 40.0%
! AGCATACAAGCTACCCTTTT+TGG + chr7.4:10256794-10256813 None:intergenic 40.0%
! ATGCGTGCTGTTATTAAGGA+TGG - chr7.4:10255520-10255539 MS.gene018551:intron 40.0%
! ATTGATGGTCTTCAGTCACA+CGG - chr7.4:10255394-10255413 MS.gene018551:CDS 40.0%
! CCATCTGTTACAACTGCTTT+TGG + chr7.4:10255877-10255896 None:intergenic 40.0%
! CTTGAATGTGGACTATTGTG+GGG - chr7.4:10256690-10256709 MS.gene018551:intron 40.0%
! GCAGCACATGTCTTTTTCTT+TGG + chr7.4:10257309-10257328 None:intergenic 40.0%
!! AATTTTGACGAGGCAATGAG+AGG - chr7.4:10256270-10256289 MS.gene018551:CDS 40.0%
!! TGTAAATGCACAGCATTGGT+TGG + chr7.4:10255334-10255353 None:intergenic 40.0%
!! TTATTTCTGCTTTGGCGATG+TGG - chr7.4:10255675-10255694 MS.gene018551:intron 40.0%
!! TTTTGGGTCTGTAGTGAACA+CGG + chr7.4:10255258-10255277 None:intergenic 40.0%
!!! TATCCGTTGGTGATTTTGTC+TGG - chr7.4:10255736-10255755 MS.gene018551:intron 40.0%
AAAGGAATGGGGATCAGTTG+AGG + chr7.4:10255584-10255603 None:intergenic 45.0%
AGAAAGATGCTCAGTGCTTG+CGG + chr7.4:10257124-10257143 None:intergenic 45.0%
AGGGTGTAAATGCACAGCAT+TGG + chr7.4:10255338-10255357 None:intergenic 45.0%
ATTGTCCATTGTCGCGACTT+TGG + chr7.4:10257948-10257967 None:intergenic 45.0%
CAAAGGGAGGCAAATCAAAG+AGG - chr7.4:10257088-10257107 MS.gene018551:CDS 45.0%
CAGCCAGACAAAATCACCAA+CGG + chr7.4:10255742-10255761 None:intergenic 45.0%
CATGCTAGCCAAAAAGACGT+GGG - chr7.4:10257363-10257382 MS.gene018551:CDS 45.0%
CGAGGCTGCTGAAATCTATA+CGG - chr7.4:10256377-10256396 MS.gene018551:CDS 45.0%
GAAGATATTCAAGCTGGGTC+GGG - chr7.4:10258112-10258131 MS.gene018551:CDS 45.0%
GCAGTATGTATGCAACAAGC+AGG - chr7.4:10255147-10255166 MS.gene018551:intron 45.0%
GCAGTTGTAACAGATGGTGA+CGG - chr7.4:10255880-10255899 MS.gene018551:CDS 45.0%
GCATGCTAGCTAAAAAGACG+TGG - chr7.4:10257464-10257483 MS.gene018551:CDS 45.0%
GGAAGATATTCAAGCTGGGT+CGG - chr7.4:10258111-10258130 MS.gene018551:CDS 45.0%
TACGTGCGTGACGATTTCTT+TGG - chr7.4:10256156-10256175 MS.gene018551:CDS 45.0%
TAGCTAGCATGCTGAGACAT+GGG + chr7.4:10257456-10257475 None:intergenic 45.0%
TAGTCAAAGCGAGGTTGTCA+AGG - chr7.4:10257587-10257606 MS.gene018551:CDS 45.0%
TGATGCCAGAAAATGTTCCG+CGG - chr7.4:10257002-10257021 MS.gene018551:CDS 45.0%
TGGACGAAAAAGGCGAAGAT+TGG - chr7.4:10256664-10256683 MS.gene018551:intron 45.0%
TTAGCTAGCATGCTGAGACA+TGG + chr7.4:10257457-10257476 None:intergenic 45.0%
TTCTATGAGGGAGGCGATAA+AGG - chr7.4:10255903-10255922 MS.gene018551:CDS 45.0%
TTCTTAGTGAACCCAACACC+GGG + chr7.4:10255472-10255491 None:intergenic 45.0%
! CATTGGTTGGAGTAGGTTCA+TGG + chr7.4:10255321-10255340 None:intergenic 45.0%
! TAGCTTGTATGCTGATGTGC+TGG - chr7.4:10256801-10256820 MS.gene018551:CDS 45.0%
! TAGGGCATCAAGGAGACTAA+TGG - chr7.4:10257828-10257847 MS.gene018551:CDS 45.0%
!! AGATGGTGACGGTTCTATGA+GGG - chr7.4:10255891-10255910 MS.gene018551:CDS 45.0%
!! CAAGCACTGAGCATCTTTCT+GGG - chr7.4:10257124-10257143 MS.gene018551:CDS 45.0%
!! GATCTCAGCAGTGTTTTTGC+AGG - chr7.4:10256545-10256564 MS.gene018551:intron 45.0%
!! TGCAGGGAAGTGTCCAAAAA+GGG - chr7.4:10256778-10256797 MS.gene018551:CDS 45.0%
!! TTGCAGGGAAGTGTCCAAAA+AGG - chr7.4:10256777-10256796 MS.gene018551:CDS 45.0%
AAAGGGAGGTAGTCAAAGCG+AGG - chr7.4:10257578-10257597 MS.gene018551:CDS 50.0%
AGACGTGGCAGGAGGATTAA+AGG - chr7.4:10257560-10257579 MS.gene018551:CDS 50.0%
AGACGTGGGAGAAGGATCAA+AGG - chr7.4:10257071-10257090 MS.gene018551:CDS 50.0%
AGCTAAAAAGACGTGGGAGG+AGG - chr7.4:10257471-10257490 MS.gene018551:CDS 50.0%
AGTCTCCTTGATGCCCTAAC+AGG + chr7.4:10257826-10257845 None:intergenic 50.0%
ATCCTTCTCCCACGTCTCTT+TGG + chr7.4:10257068-10257087 None:intergenic 50.0%
ATCCTTCTCCCACGTCTTTC+TGG + chr7.4:10257170-10257189 None:intergenic 50.0%
CAGATGAGTTGTCAGCACAG+GGG + chr7.4:10256343-10256362 None:intergenic 50.0%
CATAGACGATGACGCGTACT+TGG + chr7.4:10255937-10255956 None:intergenic 50.0%
CATGCTAGCCAGAAAGACGT+GGG - chr7.4:10257159-10257178 MS.gene018551:CDS 50.0%
CCATTGCCAGTGAAGTGCAA+AGG - chr7.4:10256910-10256929 MS.gene018551:CDS 50.0%
CCTTTGCACTTCACTGGCAA+TGG + chr7.4:10256913-10256932 None:intergenic 50.0%
CTGGCAATGGATCACGTATG+TGG + chr7.4:10256900-10256919 None:intergenic 50.0%
GAAAAGAAGAACGCGTGGTG+AGG - chr7.4:10257798-10257817 MS.gene018551:CDS 50.0%
GACGTGGCAGGAGGATTAAA+GGG - chr7.4:10257561-10257580 MS.gene018551:CDS 50.0%
GACGTGGGAGAAGGATCAAA+GGG - chr7.4:10257072-10257091 MS.gene018551:CDS 50.0%
GAGTGCTAGCCAAAAAGACG+TGG - chr7.4:10257545-10257564 MS.gene018551:CDS 50.0%
GCAGATGAGTTGTCAGCACA+GGG + chr7.4:10256344-10256363 None:intergenic 50.0%
GCATGCTAGCCAAAAAGACG+TGG - chr7.4:10257362-10257381 MS.gene018551:CDS 50.0%
GCTAGCTAAAAAGACGTGGG+AGG - chr7.4:10257468-10257487 MS.gene018551:CDS 50.0%
GGATACATGGTGGCTCAGAA+GGG - chr7.4:10255439-10255458 MS.gene018551:CDS 50.0%
GTGCGTGACGATTTCTTTGG+TGG - chr7.4:10256159-10256178 MS.gene018551:CDS 50.0%
TATGAGGGAGGCGATAAAGG+CGG - chr7.4:10255906-10255925 MS.gene018551:CDS 50.0%
TCCCACGTCTCTTTGGCTAT+CGG + chr7.4:10257061-10257080 None:intergenic 50.0%
TGGCTAGCATGCTGAGACAT+GGG + chr7.4:10257150-10257169 None:intergenic 50.0%
TGGCTAGCATGCTGAGACAT+TGG + chr7.4:10257150-10257169 None:intergenic 50.0%
TTGGCTAGCATGCTGAGACA+TGG + chr7.4:10257355-10257374 None:intergenic 50.0%
! AGGTGTTGCACTGAGTGTGA+AGG - chr7.4:10256437-10256456 MS.gene018551:CDS 50.0%
! AGTGTCCGCGGAACATTTTC+TGG + chr7.4:10257010-10257029 None:intergenic 50.0%
! ATCCTCCTCCCACGTCTTTT+TGG + chr7.4:10257374-10257393 None:intergenic 50.0%
! ATCCTCCTGCCACGTCTTTT+TGG + chr7.4:10257557-10257576 None:intergenic 50.0%
! ATTTGGCGCTGCATTGGTGA+TGG - chr7.4:10255786-10255805 MS.gene018551:intron 50.0%
! CTCGTACAAAGTGTCCAGCT+AGG - chr7.4:10255230-10255249 MS.gene018551:CDS 50.0%
!! CAGATGGTGACGGTTCTATG+AGG - chr7.4:10255890-10255909 MS.gene018551:CDS 50.0%
!! GCAAGCACTGAGCATCTTTC+TGG - chr7.4:10257123-10257142 MS.gene018551:CDS 50.0%
!! TGCACAGCATTGGTTGGAGT+AGG + chr7.4:10255328-10255347 None:intergenic 50.0%
!! TGGCTAGCACTCTGAGACAT+AGG + chr7.4:10257537-10257556 None:intergenic 50.0%
!!! TGAAGAGTTTTGGGGGGACT+TGG - chr7.4:10256059-10256078 MS.gene018551:CDS 50.0%
AAGGGTGGATATCCCGGTGT+TGG - chr7.4:10255457-10255476 MS.gene018551:CDS 55.0%
AGACGTGGGAGCAGGATCAA+AGG - chr7.4:10257275-10257294 MS.gene018551:intron 55.0%
AGACGTGGGAGGAGGATCAA+AGG - chr7.4:10257377-10257396 MS.gene018551:CDS 55.0%
AGCCAAAAAGACGTGGCAGG+AGG - chr7.4:10257552-10257571 MS.gene018551:CDS 55.0%
AGCCAAAAAGACGTGGGAGG+AGG - chr7.4:10257369-10257388 MS.gene018551:CDS 55.0%
AGCCAAAGAGACGTGGGAGA+AGG - chr7.4:10257063-10257082 MS.gene018551:CDS 55.0%
AGCCAGAAAGACGTGGGAGA+AGG - chr7.4:10257165-10257184 MS.gene018551:CDS 55.0%
AGGGTGGATATCCCGGTGTT+GGG - chr7.4:10255458-10255477 MS.gene018551:CDS 55.0%
ATCCTGCTCCCACGTCTTTC+TGG + chr7.4:10257272-10257291 None:intergenic 55.0%
ATTCAAGCTGGGTCGGGAAG+CGG - chr7.4:10258118-10258137 MS.gene018551:CDS 55.0%
CAGCACAGGGGATGAAAACC+TGG + chr7.4:10256331-10256350 None:intergenic 55.0%
CCCACGTCTCTTTGGCTATC+GGG + chr7.4:10257060-10257079 None:intergenic 55.0%
CCCGATAGCCAAAGAGACGT+GGG - chr7.4:10257057-10257076 MS.gene018551:CDS 55.0%
CGCAGATGAGTTGTCAGCAC+AGG + chr7.4:10256345-10256364 None:intergenic 55.0%
CTGGCTAGCATGCTGAGACA+TGG + chr7.4:10257151-10257170 None:intergenic 55.0%
GACGTGGGAGCAGGATCAAA+GGG - chr7.4:10257276-10257295 MS.gene018551:intron 55.0%
GACGTGGGAGGAGGATCAAA+GGG - chr7.4:10257378-10257397 MS.gene018551:CDS 55.0%
GCATGCTAGCCAGAAAGACG+TGG - chr7.4:10257158-10257177 MS.gene018551:CDS 55.0%
GCTAGCCAAAAAGACGTGGC+AGG - chr7.4:10257549-10257568 MS.gene018551:CDS 55.0%
GCTAGCCAAAAAGACGTGGG+AGG - chr7.4:10257366-10257385 MS.gene018551:CDS 55.0%
GCTCAGAAGGGTGGATATCC+CGG - chr7.4:10255451-10255470 MS.gene018551:CDS 55.0%
GGGATACATGGTGGCTCAGA+AGG - chr7.4:10255438-10255457 MS.gene018551:CDS 55.0%
GTGGCAGGAGGATTAAAGGG+AGG - chr7.4:10257564-10257583 MS.gene018551:CDS 55.0%
GTGGGAGAAGGATCAAAGGG+AGG - chr7.4:10257075-10257094 MS.gene018551:CDS 55.0%
TACATGGTGGCTCAGAAGGG+TGG - chr7.4:10255442-10255461 MS.gene018551:CDS 55.0%
TAGTGAACACGGAGCCTAGC+TGG + chr7.4:10255247-10255266 None:intergenic 55.0%
TCTGCGTTGTCTTGAACGCG+AGG - chr7.4:10256359-10256378 MS.gene018551:CDS 55.0%
TGGCTATCGGGCTGAGACAT+GGG + chr7.4:10257048-10257067 None:intergenic 55.0%
TTGGCTATCGGGCTGAGACA+TGG + chr7.4:10257049-10257068 None:intergenic 55.0%
! AGGCACCTGTTAGGGCATCA+AGG - chr7.4:10257818-10257837 MS.gene018551:CDS 55.0%
! GGAGCACCTTTGCACTTCAC+TGG + chr7.4:10256919-10256938 None:intergenic 55.0%
!! GGGGACTTGGTGAGGGAAAA+TGG - chr7.4:10256072-10256091 MS.gene018551:CDS 55.0%
!! TGGTGACGGTTCTATGAGGG+AGG - chr7.4:10255894-10255913 MS.gene018551:CDS 55.0%
!!! AGTTTTGGGGGGACTTGGTG+AGG - chr7.4:10256064-10256083 MS.gene018551:CDS 55.0%
!!! GTTTTGGGGGGACTTGGTGA+GGG - chr7.4:10256065-10256084 MS.gene018551:CDS 55.0%
AGCCAGAAAGACGTGGGAGC+AGG - chr7.4:10257267-10257286 MS.gene018551:intron 60.0%
GCCCGATAGCCAAAGAGACG+TGG - chr7.4:10257056-10257075 MS.gene018551:CDS 60.0%
GGAGGCCAAAGTCGCGACAA+TGG - chr7.4:10257940-10257959 MS.gene018551:CDS 60.0%
GTGGGAGCAGGATCAAAGGG+AGG - chr7.4:10257279-10257298 MS.gene018551:intron 60.0%
GTGGGAGGAGGATCAAAGGG+AGG - chr7.4:10257381-10257400 MS.gene018551:CDS 60.0%
! GCGTGGTGAGGCACCTGTTA+GGG - chr7.4:10257810-10257829 MS.gene018551:CDS 60.0%
! CGCGTGGTGAGGCACCTGTT+AGG - chr7.4:10257809-10257828 MS.gene018551:CDS 65.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 10255028 10258219 10255028 ID=MS.gene018551
chr7.4 mRNA 10255028 10258219 10255028 ID=MS.gene018551.t1;Parent=MS.gene018551
chr7.4 exon 10257310 10258219 10257310 ID=MS.gene018551.t1.exon1;Parent=MS.gene018551.t1
chr7.4 CDS 10257310 10258219 10257310 ID=cds.MS.gene018551.t1;Parent=MS.gene018551.t1
chr7.4 exon 10256731 10257231 10256731 ID=MS.gene018551.t1.exon2;Parent=MS.gene018551.t1
chr7.4 CDS 10256731 10257231 10256731 ID=cds.MS.gene018551.t1;Parent=MS.gene018551.t1
chr7.4 exon 10256562 10256628 10256562 ID=MS.gene018551.t1.exon3;Parent=MS.gene018551.t1
chr7.4 CDS 10256562 10256628 10256562 ID=cds.MS.gene018551.t1;Parent=MS.gene018551.t1
chr7.4 exon 10255790 10256464 10255790 ID=MS.gene018551.t1.exon4;Parent=MS.gene018551.t1
chr7.4 CDS 10255790 10256464 10255790 ID=cds.MS.gene018551.t1;Parent=MS.gene018551.t1
chr7.4 exon 10255612 10255693 10255612 ID=MS.gene018551.t1.exon5;Parent=MS.gene018551.t1
chr7.4 CDS 10255612 10255693 10255612 ID=cds.MS.gene018551.t1;Parent=MS.gene018551.t1
chr7.4 exon 10255389 10255514 10255389 ID=MS.gene018551.t1.exon6;Parent=MS.gene018551.t1
chr7.4 CDS 10255389 10255514 10255389 ID=cds.MS.gene018551.t1;Parent=MS.gene018551.t1
chr7.4 exon 10255226 10255303 10255226 ID=MS.gene018551.t1.exon7;Parent=MS.gene018551.t1
chr7.4 CDS 10255226 10255303 10255226 ID=cds.MS.gene018551.t1;Parent=MS.gene018551.t1
chr7.4 exon 10255028 10255135 10255028 ID=MS.gene018551.t1.exon8;Parent=MS.gene018551.t1
chr7.4 CDS 10255028 10255135 10255028 ID=cds.MS.gene018551.t1;Parent=MS.gene018551.t1
Gene Sequence

>MS.gene018551

ATGGAATTTGCGAGTGTTGATGAAGCTTACGATTTTTATTATAAGTACGGTAAGTGTAATGGTTTTGCTGTTAGGAAGAGTGATATTAGGCGCAATGTTAACGGTGAGATTGTAATGAGGCAGTATGTATGCAACAAGCAGGGGTTCAGAGATAAGAAGCATTTATCAAGGTTAGATAGGCAAAGAGATCATCGACGTATCACTCGTACAAAGTGTCCAGCTAGGCTCCGTGTTCACTACAGACCCAAAAAGGGTAGATATGTTGTGTCTATTTTTGAAGAGGGTCACAACCATGAACCTACTCCAACCAATGCTGTGCATTTACACCCTGTTTATCGGAAAATATCCGAGGTAGATAAAGCACAGATTGATGGTCTTCAGTCACACGGAATAAGAACTTGTCATATAATGGGATACATGGTGGCTCAGAAGGGTGGATATCCCGGTGTTGGGTTCACTAAGAAAGATCTGTACAATTACTTTGACAAAAAAATGCGTGCTGTTATTAAGGATGGTGATGTTTCAGCTGCCCTAAACTATCTGAATGTTAAGTCCTCAACTGATCCCCATTCCTTTTGTGAATATTCTGCCACTGATGACGAACGTTTGAAATGTCTATTTTGGGCAGATGGCACAAGCAGATCAGATTATTTCTGCTTTGGCGATGTGGTTGCATTTGACACAACATACAACAAGAACAAATACCACTATCCGTTGGTGATTTTGTCTGGCTGCAACAACCACTCACAAACAGTTATATTTGGCGCTGCATTGGTGATGGATGAAACAATAGACACTTATATGTGGGTGTTGACCAGTTTTCTAGATTGTATGGGAAAAAAACTTCCAAAAGCAGTTGTAACAGATGGTGACGGTTCTATGAGGGAGGCGATAAAGGCGGTTTTACCAAGTACGCGTCATCGTCTATGTGCTTAGCATCTGAACAAGAATGCTATGGACAATGCCAAGAATTCAGCTTTTTTGGAAGGTTTTAAAAAAGCAATGTACTCTAATTTTACGGAGGATGAAATTGAAGAGTTTTGGGGGGACTTGGTGAGGGAAAATGGAATTGAGAACAATCCATGGGTTACCAAAACATATGAGAACAAAGAATTGTGGGCAACTGCATACGTGCGTGACGATTTCTTTGGTGGTATAAGAACTATGTCTCAATGTAAGTCTGTTAATAAAATCATAAAGAGTTATGTTAGGAAGAAAGGAAGCATCTTTGAATTTCTGCACAATTTTGACGAGGCAATGAGAGGCTACAGAAATAACGAACTTGTAGCTGATTTTAAATCCAGGTTTTCATCCCCTGTGCTGACAACTCATCTGCGTTGTCTTGAACGCGAGGCTGCTGAAATCTATACGGCAGAGATCTTTCAAGAAGTGAAAGAAGAAATTATGAAAGGTGTTGCACTGAGTGTGAAGGAAAAAGAAGTGAATGGTGACTTGAGAAAAATGAAGTTGACAAAATATCTTGAGGAGGGTGTTTATGAAATTCTATACGATGAGTCGATCTCAGCAGTGTTTTTGCAGGAAATTTGAATCTCGAGGGGTTCCATGCTCCCATATTTTTTTTGTGTTGAAGGAAGAACGTGCCGAACACATTCCAGAATGTTTGATTTTGTTGCGTTGGACGAAAAAGGCGAAGATTGGTTTCTTGAATGTGGACTATTGTGGGGAAGTAGATTCTAAGTTGATGGAGATTGCTCGATATGGTGCATTATGTAATGTGTTTACAAATTTTTGCAGGGAAGTGTCCAAAAAGGGTAGCTTGTATGCTGATGTGCTGGATGACATACAAAAGCTTCGGGAAAAGTACGTGAGCCCTGAAGTTCCAATTGTTACTGGAAACTCAACAATGGACCACATACGTGATCCATTGCCAGTGAAGTGCAAAGGTGCTCCAAAGAAGAATAAAAAGGCACCAAAGTTTGTAAGAAAATGTTCAAACTGTGGCAGCAAGCAACATGATGCCAGAAAATGTTCCGCGGACACTGAATGTCTTTTTGTGCCCATGTCTCAGCCCGATAGCCAAAGAGACGTGGGAGAAGGATCAAAGGGAGGCAAATCAAAGAGGAAGACATGTTCCGCAAGCACTGAGCATCTTTCTGGGCCAATGTCTCAGCATGCTAGCCAGAAAGACGTGGGAGAAGGATCAAAGGGAGTGAAATCAAAGAAAAAGAATTGTTCTGCAAGCAATGAACATCTTTCTGCGCCCATGTCTCAGCATGCTAGCCAGAAAGACGTGGGAGCAGGATCAAAGGGAGGACACCCAAAGAAAAAGACATGTGCTGCAAGCAGTCAACATATTTCTGCGCCCATGTCTCAGCATGCTAGCCAAAAAGACGTGGGAGGAGGATCAAAGGGAGGACACCCAAAGAAAAAGACATGTGCTGCAAGCAGTCAACATATTTCTGCGCCCATGTCTCAGCATGCTAGCTAAAAAGACGTGGGAGGAGGATCAAAGGGAGGACACCCAAAGAAAAAGACATGTTCTGCGCCTATGTCTCAGAGTGCTAGCCAAAAAGACGTGGCAGGAGGATTAAAGGGAGGTAGTCAAAGCGAGGTTGTCAAGGATTCACAAAGATCCGTGAATATGAACGTAAGTACCAACAATGTGTTTAAATATAGGAATGTAAATGACCTACTTACTGCACAAGTAATATGCACCTTTTGATTAACTTCTCAATTTTTGGCAGGATAAGAACATTGACAGTGAGGATTGTGTGATGATTCCTGAACAAGCTAAAGTAGGAAAGAAATGGAAAAGAAGAACGCGTGGTGAGGCACCTGTTAGGGCATCAAGGAGACTAATGGCACTGAATGTAAGTTCAATCAAAGTAATCCCATATTCTTGACCTCATATATGTTGTTTTTTAATGTTAACATGGATAATTTTTGATTTCGGAGGCCAAAGTCGCGACAATGGACAATGATGAAGAAGATGATAATGTGTCAGGAAATGATCCGTCTAACGAAGATGACAGAGTATAACTTCAATTTTGAATTACCAATGTTGAGTCTAAACGTAATGTGTCCCAGTCCAATGAGAAATGCTTTTGACTTGTGTTTGTGTAGGAAGATATTCAAGCTGGGTCGGGAAGCGGACCTGAACCTACTGTGAATGTGATGAAAGTTGCTTCTTGTATGACGTTGATGCAACATATGATGTCCTTACGTCGTTGA

Protein sequence

>MS.gene018551.t1

MEFASVDEAYDFYYKYGKCNGFAVRKSDIRRNVNGEIVMRQYVCNKQGFRDKKHLSRLDRQRDHRRITRTKCPARLRVHYRPKKGRYVVSIFEEGHNHEPTPTNAVHLHPVYRKISEVDKAQIDGLQSHGIRTCHIMGYMVAQKGGYPGVGFTKKDLYNYFDKKMRAVIKDGDVSAALNYLNVKSSTDPHSFCEYSATDDERLKCLFWADGTSRSDYFCFGDVVAFDTTYNKNKYHYPLVILSGCNNHSQTVIFGAALVMDETIDTYMWVLTSFLDCMGKKLPKAVVTDGDGSMREAIKAVLPSFKKAMYSNFTEDEIEEFWGDLVRENGIENNPWVTKTYENKELWATAYVRDDFFGGIRTMSQCKSVNKIIKSYVRKKGSIFEFLHNFDEAMRGYRNNELVADFKSRFSSPVLTTHLRCLEREAAEIYTAEIFQEVKEEIMKGVALSVKEKEVNGDLRKMKLTKYLEEGRTCRTHSRMFDFVALDEKGEDWEVSKKGSLYADVLDDIQKLREKYVSPEVPIVTGNSTMDHIRDPLPVKCKGAPKKNKKAPKFVRKCSNCGSKQHDARKCSADTECLFVPMSQPDSQRDVGEGSKGGKSKRKTCSASTEHLSGPMSQHASQKDVGEGSKGVKSKKKNCSASNEHLSAPMSQHASQKDVGAGSKGGHPKKKTCAASSQHISAPMSQHASQKDVGGGSKGGHPKKKTCAASSQHISAPIQKDVAGGLKGGSQSEVVKDSQRSVNMNDKNIDSEDCVMIPEQAKVGKKWKRRTRGEAPVRASRRLMALNAKVATMDNDEEDDNVSGNDPSNEDDREDIQAGSGSGPEPTVNVMKVASCMTLMQHMMSLRR