AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene018653

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene018653.t1 MTR_7g098250 98.569 489 7 0 1 489 1 489 0.0 992
MS.gene018653.t1 MTR_1g080330 44.656 421 177 11 72 489 21 388 2.74e-96 296
MS.gene018653.t1 MTR_7g115530 47.170 371 162 9 72 437 49 390 1.22e-90 283
MS.gene018653.t1 MTR_1g080330 48.161 299 117 6 72 369 21 282 1.32e-79 249
MS.gene018653.t1 MTR_7g115530 47.351 302 130 6 72 369 49 325 1.13e-75 241
MS.gene018653.t1 MTR_7g115530 44.604 278 125 6 72 345 49 301 1.66e-61 203
MS.gene018653.t1 MTR_7g093030 53.125 160 74 1 257 416 207 365 1.17e-55 191
MS.gene018653.t1 MTR_7g115530 42.391 276 130 6 72 343 49 299 4.72e-55 188
MS.gene018653.t1 MTR_1g053835 59.441 143 56 2 252 394 248 388 1.67e-54 189
MS.gene018653.t1 MTR_2g027860 64.493 138 46 2 262 396 49 186 1.16e-51 178
MS.gene018653.t1 MTR_7g088070 56.129 155 63 2 241 395 33 182 4.30e-51 175
MS.gene018653.t1 MTR_7g088070 54.717 159 63 3 241 395 33 186 1.62e-49 171
MS.gene018653.t1 MTR_7g115530 41.036 251 119 6 72 318 49 274 4.09e-45 159
MS.gene018653.t1 MTR_6g032990 52.667 150 53 3 258 390 38 186 2.76e-44 160
MS.gene018653.t1 MTR_7g115530 40.551 254 121 7 72 321 49 276 1.11e-43 156
MS.gene018653.t1 MTR_2g086450 48.765 162 63 3 249 390 32 193 6.27e-40 148
MS.gene018653.t1 MTR_5g027440 50.355 141 58 2 262 390 25 165 4.58e-37 138
MS.gene018653.t1 MTR_5g041350 43.537 147 67 2 258 390 11 155 1.16e-36 139
MS.gene018653.t1 MTR_4g081710 46.575 146 63 3 258 390 13 156 6.63e-36 136
MS.gene018653.t1 MTR_2g027800 45.890 146 76 2 258 403 35 177 1.75e-34 131
MS.gene018653.t1 MTR_1g053800 44.966 149 76 2 248 391 158 305 3.43e-34 131
MS.gene018653.t1 MTR_6g444980 47.407 135 62 2 262 390 35 166 6.76e-34 131
MS.gene018653.t1 MTR_7g068600 50.355 141 55 4 253 384 4 138 2.17e-33 127
MS.gene018653.t1 MTR_2g027800 41.615 161 75 3 258 403 35 191 3.77e-33 128
MS.gene018653.t1 MTR_6g444980 47.692 130 59 2 262 385 35 161 8.91e-33 128
MS.gene018653.t1 MTR_1g090670 33.466 251 139 8 246 479 28 267 3.26e-31 122
MS.gene018653.t1 MTR_7g093030 57.303 89 37 1 257 345 207 294 1.15e-30 120
MS.gene018653.t1 MTR_1g053830 52.500 80 38 0 252 331 8 87 5.78e-26 102
MS.gene018653.t1 MTR_7g093010 38.509 161 91 3 229 387 185 339 9.27e-25 105
MS.gene018653.t1 MTR_1g087470 73.333 60 16 0 364 423 78 137 4.36e-21 89.7
MS.gene018653.t1 MTR_2g023580 58.824 68 28 0 251 318 44 111 5.54e-20 89.4
MS.gene018653.t1 MTR_0223s0040 67.857 56 18 0 263 318 19 74 1.72e-19 89.0
MS.gene018653.t1 MTR_1g112370 66.071 56 19 0 263 318 23 78 3.34e-19 89.0
MS.gene018653.t1 MTR_2g084230 67.857 56 18 0 263 318 98 153 7.98e-19 87.4
MS.gene018653.t1 MTR_7g069660 64.286 56 20 0 263 318 72 127 1.04e-18 87.8
MS.gene018653.t1 MTR_2g084230 67.857 56 18 0 263 318 98 153 1.11e-18 88.2
MS.gene018653.t1 MTR_8g086410 66.071 56 19 0 263 318 112 167 1.34e-18 88.2
MS.gene018653.t1 MTR_8g086410 66.071 56 19 0 263 318 110 165 1.44e-18 88.2
MS.gene018653.t1 MTR_1g021520 62.121 66 25 0 263 328 127 192 1.47e-18 86.7
MS.gene018653.t1 MTR_8g066310 54.430 79 34 1 250 326 161 239 1.55e-18 87.4
MS.gene018653.t1 MTR_2g016220 67.857 56 18 0 263 318 90 145 2.07e-18 87.4
MS.gene018653.t1 MTR_2g016220 67.857 56 18 0 263 318 90 145 2.19e-18 87.0
MS.gene018653.t1 MTR_3g450310 56.140 57 25 0 262 318 19 75 2.91e-18 84.0
MS.gene018653.t1 MTR_5g019390 88.372 43 5 0 369 411 16 58 2.95e-18 79.3
MS.gene018653.t1 MTR_8g086410 56.757 74 29 2 263 334 112 184 7.41e-18 86.3
MS.gene018653.t1 MTR_6g071625 67.857 56 18 0 263 318 203 258 8.03e-18 85.5
MS.gene018653.t1 MTR_3g064840 59.420 69 26 1 263 329 275 343 1.49e-17 85.5
MS.gene018653.t1 MTR_5g029470 61.905 63 24 0 256 318 213 275 2.37e-17 84.3
MS.gene018653.t1 MTR_2g016220 58.209 67 27 1 263 329 90 155 4.98e-17 83.2
MS.gene018653.t1 MTR_4g113140 52.778 72 34 0 253 324 226 297 1.24e-14 76.3
MS.gene018653.t1 MTR_1g090670 31.034 203 112 8 294 479 1 192 1.67e-14 73.2
MS.gene018653.t1 MTR_2g450070 58.621 58 23 1 258 315 209 265 4.75e-14 75.1
MS.gene018653.t1 MTR_2g450070 58.621 58 23 1 258 315 209 265 5.13e-14 75.1
MS.gene018653.t1 MTR_4g021790 50.000 70 34 1 262 331 168 236 7.37e-14 72.4
MS.gene018653.t1 MTR_4g086835 53.846 65 30 0 262 326 274 338 2.00e-13 72.4
MS.gene018653.t1 MTR_5g054300 48.718 78 40 0 238 315 174 251 3.16e-13 71.2
MS.gene018653.t1 MTR_4g021855 40.594 101 51 3 253 345 159 258 5.46e-13 70.1
MS.gene018653.t1 MTR_1g093080 52.381 63 30 0 262 324 211 273 7.28e-13 70.5
MS.gene018653.t1 MTR_4g121020 44.444 99 40 4 258 345 107 201 8.35e-13 70.9
MS.gene018653.t1 MTR_4g121020 44.444 99 40 4 258 345 211 305 1.05e-12 70.9
MS.gene018653.t1 MTR_4g121020 44.444 99 40 4 258 345 211 305 1.08e-12 70.9
MS.gene018653.t1 MTR_1g032570 53.968 63 28 1 258 320 127 188 1.15e-12 70.5
MS.gene018653.t1 MTR_1g032570 53.968 63 28 1 258 320 196 257 1.39e-12 70.5
MS.gene018653.t1 MTR_4g021760 44.565 92 48 3 253 342 160 250 1.61e-12 68.9
MS.gene018653.t1 MTR_3g106220 53.968 63 28 1 258 320 194 255 3.24e-12 69.3
MS.gene018653.t1 MTR_1g013170 51.471 68 32 1 258 325 187 253 3.35e-12 68.9
MS.gene018653.t1 MTR_4g086835 53.846 65 29 1 262 326 274 337 3.57e-12 68.6
MS.gene018653.t1 MTR_5g017980 52.239 67 31 1 259 324 190 256 3.78e-12 67.8
MS.gene018653.t1 MTR_4g064730 39.080 87 52 1 229 315 98 183 4.28e-12 67.4
MS.gene018653.t1 MTR_4g131580 46.835 79 40 2 258 336 196 272 8.36e-12 67.8
MS.gene018653.t1 MTR_4g131600 45.570 79 41 2 258 336 197 273 8.40e-12 67.8
MS.gene018653.t1 MTR_4g131570 51.562 64 30 1 258 321 199 261 8.62e-12 67.8
MS.gene018653.t1 MTR_7g089010 55.556 54 23 1 262 315 91 143 1.18e-11 65.9
MS.gene018653.t1 MTR_4g098870 59.259 54 21 1 262 315 330 382 1.19e-11 67.4
MS.gene018653.t1 MTR_4g098870 59.259 54 21 1 262 315 310 362 1.23e-11 67.4
MS.gene018653.t1 MTR_4g098870 59.259 54 21 1 262 315 330 382 1.36e-11 67.4
MS.gene018653.t1 MTR_4g098870 59.259 54 21 1 262 315 310 362 1.39e-11 67.0
MS.gene018653.t1 MTR_4g098870 59.259 54 21 1 262 315 349 401 1.39e-11 67.4
MS.gene018653.t1 MTR_5g014040 36.522 115 58 3 214 315 251 363 1.91e-11 66.6
MS.gene018653.t1 MTR_5g017980 52.239 67 30 2 259 324 190 255 6.40e-11 63.9
MS.gene018653.t1 MTR_5g017980 52.239 67 30 2 259 324 189 254 6.65e-11 63.9
MS.gene018653.t1 MTR_5g014040 34.167 120 64 3 214 320 251 368 8.38e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene018653.t1 AT4G28610 47.661 449 166 18 1 440 1 389 1.73e-109 331
MS.gene018653.t1 AT5G29000 47.103 397 173 10 18 404 5 374 7.26e-96 296
MS.gene018653.t1 AT5G29000 50.000 348 138 9 67 404 10 331 5.17e-94 290
MS.gene018653.t1 AT5G29000 50.000 348 138 9 67 404 10 331 5.17e-94 290
MS.gene018653.t1 AT3G04450 49.851 335 144 11 67 393 14 332 7.54e-84 265
MS.gene018653.t1 AT3G04450 49.851 335 144 11 67 393 14 332 7.54e-84 265
MS.gene018653.t1 AT3G04450 49.851 335 144 11 67 393 54 372 2.43e-83 265
MS.gene018653.t1 AT2G20400 48.289 263 114 6 139 391 110 360 8.41e-61 204
MS.gene018653.t1 AT2G20400 48.106 264 114 7 139 391 110 361 5.93e-59 199
MS.gene018653.t1 AT5G29000 40.625 320 158 8 18 330 5 299 7.36e-56 189
MS.gene018653.t1 AT5G06800 56.173 162 70 1 232 393 162 322 3.48e-54 186
MS.gene018653.t1 AT2G01060 64.085 142 49 2 257 396 10 151 7.74e-53 180
MS.gene018653.t1 AT5G06800 54.491 167 70 2 232 393 162 327 7.16e-52 180
MS.gene018653.t1 AT3G13040 54.348 184 72 4 251 429 233 409 1.65e-49 176
MS.gene018653.t1 AT3G13040 54.348 184 72 4 251 429 233 409 1.65e-49 176
MS.gene018653.t1 AT3G13040 54.348 184 72 4 251 429 233 409 1.65e-49 176
MS.gene018653.t1 AT3G04450 42.182 275 134 11 67 332 54 312 2.73e-46 164
MS.gene018653.t1 AT3G24120 54.483 145 54 3 262 394 41 185 9.80e-45 159
MS.gene018653.t1 AT4G13640 53.793 145 55 2 262 394 37 181 5.99e-44 157
MS.gene018653.t1 AT3G24120 53.378 148 54 4 262 394 41 188 1.18e-42 153
MS.gene018653.t1 AT4G13640 52.703 148 55 3 262 394 37 184 8.36e-42 151
MS.gene018653.t1 AT3G04030 50.676 148 58 2 258 390 41 188 6.53e-41 151
MS.gene018653.t1 AT5G18240 44.000 200 83 5 240 415 26 220 3.05e-40 150
MS.gene018653.t1 AT5G18240 44.000 200 83 5 240 415 26 220 3.05e-40 150
MS.gene018653.t1 AT1G69580 46.497 157 67 1 251 390 23 179 4.91e-39 145
MS.gene018653.t1 AT1G69580 46.875 160 63 3 251 390 23 180 1.24e-38 144
MS.gene018653.t1 AT3G04030 50.000 148 58 3 258 390 41 187 2.46e-38 144
MS.gene018653.t1 AT1G79430 46.763 139 65 2 262 394 34 169 1.23e-37 141
MS.gene018653.t1 AT5G18240 43.500 200 82 6 240 415 26 218 3.03e-37 141
MS.gene018653.t1 AT3G04030 47.973 148 56 3 258 390 41 182 2.41e-35 136
MS.gene018653.t1 AT5G18240 42.000 200 81 6 240 415 26 214 1.63e-34 134
MS.gene018653.t1 AT5G18240 42.000 200 81 6 240 415 26 214 1.63e-34 134
MS.gene018653.t1 AT2G01060 63.725 102 35 2 297 396 1 102 8.38e-33 125
MS.gene018653.t1 AT5G45580 43.709 151 67 4 262 394 7 157 2.77e-32 124
MS.gene018653.t1 AT5G45580 43.709 151 67 4 262 394 23 173 4.27e-32 124
MS.gene018653.t1 AT3G12730 42.553 141 73 2 262 394 23 163 1.27e-30 119
MS.gene018653.t1 AT5G06800 53.125 96 45 0 232 327 162 257 1.66e-26 108
MS.gene018653.t1 AT3G04030 45.536 112 46 2 294 390 1 112 1.33e-20 92.8
MS.gene018653.t1 AT2G42660 59.091 66 27 0 263 328 51 116 1.54e-20 91.7
MS.gene018653.t1 AT1G79430 41.121 107 54 3 294 394 1 104 2.25e-20 91.7
MS.gene018653.t1 AT1G14600 69.643 56 17 0 263 318 24 79 8.25e-20 89.4
MS.gene018653.t1 AT5G42630 45.455 110 47 2 227 329 69 172 3.04e-19 87.0
MS.gene018653.t1 AT2G02060 71.698 53 15 0 263 315 30 82 4.00e-19 87.4
MS.gene018653.t1 AT2G02060 71.698 53 15 0 263 315 30 82 4.00e-19 87.4
MS.gene018653.t1 AT5G42630 45.455 110 47 2 227 329 69 172 6.68e-19 87.0
MS.gene018653.t1 AT4G04605 56.522 69 30 0 263 331 15 83 1.01e-18 85.5
MS.gene018653.t1 AT4G17695 55.844 77 32 1 252 326 154 230 1.13e-18 87.4
MS.gene018653.t1 AT2G40260 66.071 56 19 0 263 318 83 138 2.13e-18 87.8
MS.gene018653.t1 AT1G32240 43.925 107 54 1 223 329 180 280 2.22e-18 87.0
MS.gene018653.t1 AT1G32240 43.925 107 54 1 223 329 180 280 3.06e-18 87.0
MS.gene018653.t1 AT5G16560 60.274 73 26 2 263 332 220 292 3.17e-18 87.0
MS.gene018653.t1 AT2G38300 54.286 70 32 0 263 332 55 124 3.91e-18 85.9
MS.gene018653.t1 AT2G06020 54.386 57 26 0 262 318 86 142 1.45e-15 77.8
MS.gene018653.t1 AT3G04030 41.964 112 44 3 294 390 1 106 2.11e-15 77.4
MS.gene018653.t1 AT2G03500 52.778 72 34 0 253 324 224 295 5.74e-15 77.4
MS.gene018653.t1 AT4G04580 52.308 65 30 1 263 327 15 78 1.64e-14 71.6
MS.gene018653.t1 AT5G18240 36.986 146 60 5 294 415 1 138 1.82e-14 74.7
MS.gene018653.t1 AT1G25550 60.000 60 24 0 262 321 209 268 3.38e-14 74.3
MS.gene018653.t1 AT4G37180 55.385 65 28 1 252 315 199 263 3.08e-13 71.6
MS.gene018653.t1 AT4G37180 55.385 65 28 1 252 315 206 270 3.60e-13 71.2
MS.gene018653.t1 AT3G12730 34.862 109 63 2 294 394 1 109 4.14e-13 68.2
MS.gene018653.t1 AT1G68670 55.556 63 28 0 262 324 215 277 4.37e-13 70.9
MS.gene018653.t1 AT3G62670 56.452 62 23 1 258 315 207 268 4.41e-13 71.6
MS.gene018653.t1 AT5G59570 47.692 65 33 1 251 315 130 193 5.81e-13 70.1
MS.gene018653.t1 AT5G59570 47.692 65 33 1 251 315 130 193 5.81e-13 70.1
MS.gene018653.t1 AT3G16857 59.322 59 23 1 262 320 167 224 6.75e-13 71.6
MS.gene018653.t1 AT3G16857 59.322 59 23 1 262 320 237 294 8.57e-13 71.2
MS.gene018653.t1 AT3G16857 59.322 59 23 1 262 320 237 294 8.59e-13 71.2
MS.gene018653.t1 AT5G44190 50.769 65 31 1 254 318 139 202 1.20e-12 69.7
MS.gene018653.t1 AT5G44190 50.769 65 31 1 254 318 139 202 1.43e-12 69.3
MS.gene018653.t1 AT2G40970 45.455 77 37 2 244 320 91 162 1.77e-12 67.8
MS.gene018653.t1 AT1G49560 49.315 73 37 0 252 324 182 254 2.02e-12 68.9
MS.gene018653.t1 AT5G05090 55.556 54 23 1 262 315 81 133 3.21e-12 67.4
MS.gene018653.t1 AT4G04555 51.786 56 27 0 263 318 15 70 3.48e-12 63.5
MS.gene018653.t1 AT3G10760 55.556 54 23 1 262 315 105 157 3.70e-12 67.8
MS.gene018653.t1 AT3G46640 55.556 54 23 1 262 315 144 196 4.73e-12 67.4
MS.gene018653.t1 AT3G46640 55.556 54 23 1 262 315 144 196 4.73e-12 67.4
MS.gene018653.t1 AT3G46640 55.556 54 23 1 262 315 144 196 4.99e-12 67.4
MS.gene018653.t1 AT5G58080 59.259 54 21 1 262 315 194 246 6.83e-12 68.2
MS.gene018653.t1 AT3G25790 56.364 55 24 0 267 321 201 255 7.29e-12 67.4
MS.gene018653.t1 AT2G20570 53.125 64 29 1 255 318 146 208 1.79e-11 66.6
MS.gene018653.t1 AT1G25550 60.784 51 20 0 262 312 209 259 2.61e-11 64.7
MS.gene018653.t1 AT4G37180 53.226 62 28 1 252 312 199 260 4.89e-11 63.9
MS.gene018653.t1 AT1G13300 49.206 63 32 0 262 324 181 243 6.15e-11 64.3
MS.gene018653.t1 AT1G49190 52.632 57 24 1 262 315 215 271 6.83e-11 64.7

Find 120 sgRNAs with CRISPR-Local

Find 367 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTGTTCATGCAGCCGTTTC+TGG 0.141434 7.1:-10348644 None:intergenic
ACGATACTTTGACTTCTAAT+TGG 0.176459 7.1:+10345774 MS.gene018653:CDS
ATCTGGTGTTGAGCCATTTA+AGG 0.223957 7.1:+10350402 MS.gene018653:CDS
CTTAGAAGCTTGTTGAGATT+TGG 0.249037 7.1:-10350605 None:intergenic
TGACTTGCAATGGTCCATTT+TGG 0.253593 7.1:-10350509 None:intergenic
TTACTGTATTCTTCAAATAA+TGG 0.301037 7.1:+10345542 MS.gene018653:CDS
TCTGGGGTATGTCTCCTCTA+AGG 0.303816 7.1:-10345300 None:intergenic
CAAATCTCAACAAGCTTCTA+AGG 0.304177 7.1:+10350606 MS.gene018653:CDS
CGGCTGCGAATCAGAAAATC+TGG 0.314389 7.1:-10345318 None:intergenic
GCTGATGATGATGCCTTAAA+TGG 0.316466 7.1:-10350415 None:intergenic
CATCTGTCCTTTGACGCTTA+GGG 0.327736 7.1:-10350666 None:intergenic
TCATCTGTCCTTTGACGCTT+AGG 0.327888 7.1:-10350667 None:intergenic
CAACAACTTCCAGCTCTATC+TGG 0.330349 7.1:+10345999 MS.gene018653:CDS
TCATGTTAAAAGCCACTTAC+AGG 0.337959 7.1:+10346292 MS.gene018653:CDS
TCCCTATGTTATTCAGTTGC+TGG 0.340671 7.1:-10345235 None:intergenic
TGAATTGGAAGCATCCAAAA+TGG 0.350129 7.1:+10350495 MS.gene018653:CDS
GAGCGGTGCCTGCAATATTA+TGG 0.356005 7.1:+10345688 MS.gene018653:CDS
CTCGGTGGCCATAATATTGC+AGG 0.370683 7.1:-10345696 None:intergenic
TGTCCATCCAACACCCTTAG+AGG 0.370709 7.1:+10345286 MS.gene018653:CDS
TTGTGAAGATGACTTTGAAA+TGG 0.383554 7.1:-10345946 None:intergenic
ATGAGCTTCAGCACACCCTT+AGG 0.390446 7.1:-10346245 None:intergenic
TGAGCTTCACGAGGCATTTG+TGG 0.391511 7.1:+10346097 MS.gene018653:CDS
CTGAATAACATAGGGATGTC+TGG 0.398764 7.1:+10345242 MS.gene018653:CDS
TGGAAGTTGTTGGTGACCTT+GGG 0.401493 7.1:-10345988 None:intergenic
AAAATGGACCATTGCAAGTC+AGG 0.405684 7.1:+10350511 MS.gene018653:CDS
TAGAGACGAAATATCTTCAA+TGG 0.411601 7.1:-10347197 None:intergenic
TGCAGGCACCGCTCTCTACT+TGG 0.420513 7.1:-10345679 None:intergenic
ATTGCTTCTCAAACATCATC+TGG 0.427142 7.1:-10350375 None:intergenic
TTTGAGAAGCAATGCAAATC+TGG 0.429240 7.1:+10350385 MS.gene018653:CDS
CCAATGGAAACAGTGCTTCA+TGG 0.436394 7.1:+10345597 MS.gene018653:CDS
CAGATAGAGCTGGAAGTTGT+TGG 0.437915 7.1:-10345998 None:intergenic
TTTGGTAGGAGAGTCTTTCA+TGG 0.441273 7.1:-10350470 None:intergenic
GTCATTGAGTAACATGGCTT+CGG 0.445080 7.1:+10345514 MS.gene018653:CDS
TGAGCTTCAGCACACCCTTA+GGG 0.446411 7.1:-10346244 None:intergenic
AGTCCATCGCATTCGTGGCT+TGG 0.450820 7.1:-10346072 None:intergenic
AGAAGCTTGTTGAGATTTGG+AGG 0.454821 7.1:-10350602 None:intergenic
AGAGACGAAATATCTTCAAT+GGG 0.455908 7.1:-10347196 None:intergenic
TTTGACGCTTAGGGGCTTGA+GGG 0.457431 7.1:-10350657 None:intergenic
GTTGTTGGTGACCTTGGGAT+TGG 0.458647 7.1:-10345983 None:intergenic
TGCGAATAGAAGAGCAAGGC+AGG 0.459388 7.1:+10350347 MS.gene018653:CDS
CTGGAAGTTGTTGGTGACCT+TGG 0.461134 7.1:-10345989 None:intergenic
CCATGAAGCACTGTTTCCAT+TGG 0.464624 7.1:-10345597 None:intergenic
ACAAATGCCTCGTGAAGCTC+AGG 0.468546 7.1:-10346095 None:intergenic
TATCGTCATCACTGATTAGC+TGG 0.473545 7.1:-10345757 None:intergenic
CCCTATGTTATTCAGTTGCT+GGG 0.475601 7.1:-10345234 None:intergenic
TACTTGGTTATTATCAATTG+AGG 0.476017 7.1:-10345663 None:intergenic
GCAGAATTTGCTGAGGAAGA+TGG 0.480337 7.1:-10346044 None:intergenic
CTTTGACGCTTAGGGGCTTG+AGG 0.481559 7.1:-10350658 None:intergenic
TATGTCTCCTCTAAGGGTGT+TGG 0.482313 7.1:-10345293 None:intergenic
TGAAGATCGTTAGAATATCC+AGG 0.483197 7.1:-10345434 None:intergenic
GTACTACCATTAGCTTGATC+AGG 0.485584 7.1:-10350535 None:intergenic
TGATTCGCAGCCGACTTATG+TGG 0.488057 7.1:+10345328 MS.gene018653:CDS
TTCTAAGCGAAATGATTGGC+AGG 0.490400 7.1:+10345724 MS.gene018653:CDS
TCAGCCATTGAAAATCCATC+TGG 0.492315 7.1:+10350433 MS.gene018653:CDS
TAATGTGTTGATGTTGTAGA+AGG 0.498623 7.1:-10345572 None:intergenic
TCAGGAGTCCATCGCATTCG+TGG 0.504175 7.1:-10346077 None:intergenic
TCAGGACCTGATCAAGCTAA+TGG 0.505420 7.1:+10350529 MS.gene018653:CDS
TCAACGAAATGCAGAAATAC+AGG 0.509552 7.1:+10346380 MS.gene018653:intron
AGAAATCAAGAAAACTAGGC+AGG 0.510355 7.1:-10345631 None:intergenic
GATCTTTCAATTGAGAAAGC+AGG 0.512244 7.1:-10345206 None:intergenic
GCTGGAAGCAGTTGAGAAGC+TGG 0.513069 7.1:+10350576 MS.gene018653:CDS
CTGAAGCTCATGAAAGTTGA+AGG 0.515183 7.1:+10346257 MS.gene018653:CDS
CACGGTTGAGGAAAGCTCGC+TGG 0.521650 7.1:+10350558 MS.gene018653:CDS
ATAAGTTCTAGTGGAGCAGT+TGG 0.527402 7.1:+10345392 MS.gene018653:CDS
TTCTACAGGAGCTACCCCTA+AGG 0.528407 7.1:+10346229 MS.gene018653:intron
TAATGGTAGTACCACGGTTG+AGG 0.529038 7.1:+10350546 MS.gene018653:CDS
AGCGAAATGATTGGCAGGAG+TGG 0.533310 7.1:+10345729 MS.gene018653:CDS
CTCAAGCCCCTAAGCGTCAA+AGG 0.535629 7.1:+10350659 MS.gene018653:CDS
GGCTGCGAATCAGAAAATCT+GGG 0.541784 7.1:-10345317 None:intergenic
TGCAGATGGAGGTCCAGAAA+CGG 0.542705 7.1:+10348631 MS.gene018653:CDS
ATCTGTCCTTTGACGCTTAG+GGG 0.544083 7.1:-10350665 None:intergenic
GCAGAGAAATCAAGAAAACT+AGG 0.544687 7.1:-10345635 None:intergenic
GATCAGGTCCTGACTTGCAA+TGG 0.546117 7.1:-10350519 None:intergenic
TATTCAAGATCTTGAGCCAA+AGG 0.548434 7.1:+10345817 MS.gene018653:CDS
GAAATCAAGAAAACTAGGCA+GGG 0.552022 7.1:-10345630 None:intergenic
TCAAGTCATATAAGTTCTAG+TGG 0.552138 7.1:+10345383 MS.gene018653:CDS
GCGAAATGATTGGCAGGAGT+GGG 0.552812 7.1:+10345730 MS.gene018653:CDS
CTGGGGTATGTCTCCTCTAA+GGG 0.553089 7.1:-10345299 None:intergenic
CCCAGCAACTGAATAACATA+GGG 0.563465 7.1:+10345234 MS.gene018653:CDS
ACATCAACACATTATTCCAA+TGG 0.565212 7.1:+10345581 MS.gene018653:CDS
TAAGTTCTAGTGGAGCAGTT+GGG 0.568512 7.1:+10345393 MS.gene018653:CDS
GGATGGACAGACAACGATGA+AGG 0.572042 7.1:-10345272 None:intergenic
TTATTTGAAGAATACAGTAA+TGG 0.577502 7.1:-10345539 None:intergenic
GTATTCTTCAAATAATGGAC+CGG 0.578645 7.1:+10345547 MS.gene018653:CDS
GCCCAGCAACTGAATAACAT+AGG 0.578966 7.1:+10345233 MS.gene018653:CDS
AAATGGTACATACCTGTAAG+TGG 0.579249 7.1:-10346304 None:intergenic
TTCGCAGTCATTGAGTAACA+TGG 0.580455 7.1:+10345508 MS.gene018653:CDS
TATGTACCTTCAGATGACTC+TGG 0.581225 7.1:-10346418 None:intergenic
GGAAGCTCTACGACTGCAGA+TGG 0.586016 7.1:+10348617 MS.gene018653:CDS
ACGGCTGCATGAACAGCTTG+AGG 0.587387 7.1:+10348650 MS.gene018653:CDS
TCTCCTCTAAGGGTGTTGGA+TGG 0.587533 7.1:-10345289 None:intergenic
GGCTGTTGCAGAATTTGCTG+AGG 0.587897 7.1:-10346051 None:intergenic
GAAGATCGTTAGAATATCCA+GGG 0.589349 7.1:-10345433 None:intergenic
TGACAGTGGTATTGAGATCA+CGG 0.590168 7.1:+10348596 MS.gene018653:intron
TCTACAGGAGCTACCCCTAA+GGG 0.595403 7.1:+10346230 MS.gene018653:intron
AAATCAAGAAAACTAGGCAG+GGG 0.598415 7.1:-10345629 None:intergenic
GAGGCTGTCAATCAACTTGG+TGG 0.598508 7.1:+10346119 MS.gene018653:CDS
CAGCCAAGCCACGAATGCGA+TGG 0.603901 7.1:+10346069 MS.gene018653:CDS
AGGCTGTCAATCAACTTGGT+GGG 0.604087 7.1:+10346120 MS.gene018653:CDS
GCTTCACGAGGCATTTGTGG+AGG 0.611503 7.1:+10346100 MS.gene018653:CDS
GTGGAGGCTGTCAATCAACT+TGG 0.611778 7.1:+10346116 MS.gene018653:CDS
GAGCTTCAGCACACCCTTAG+GGG 0.611866 7.1:-10346243 None:intergenic
ATTTCGCTTAGAAAACTCCT+CGG 0.613155 7.1:-10345714 None:intergenic
GTTGATGTTGTAGAAGGTAC+CGG 0.613506 7.1:-10345566 None:intergenic
CTATCTGGAGAAAATCATGT+TGG 0.628306 7.1:+10346014 MS.gene018653:CDS
TCGGCAGGACACCAATCCCA+AGG 0.630813 7.1:+10345972 MS.gene018653:CDS
TATAGACCAGAGTCATCTGA+AGG 0.642332 7.1:+10346412 MS.gene018653:CDS
GTGTCAGAAGACACTCCAGA+TGG 0.648683 7.1:-10350448 None:intergenic
CAGCGAGCTTTCCTCAACCG+TGG 0.657234 7.1:-10350557 None:intergenic
GATAATAACCAAGTAGAGAG+CGG 0.662017 7.1:+10345671 MS.gene018653:CDS
ATGGACTCCTGAGCTTCACG+AGG 0.664112 7.1:+10346088 MS.gene018653:CDS
AGCTCTACGACTGCAGATGG+AGG 0.664727 7.1:+10348620 MS.gene018653:CDS
GCTTCTCAAACATCATCTGG+AGG 0.671425 7.1:-10350372 None:intergenic
TCGCTTAGAAAACTCCTCGG+TGG 0.696184 7.1:-10345711 None:intergenic
CAGTTGCGAATAGAAGAGCA+AGG 0.699827 7.1:+10350343 MS.gene018653:CDS
GCTGCGAATCAGAAAATCTG+GGG 0.701278 7.1:-10345316 None:intergenic
CTGCAATATTATGGCCACCG+AGG 0.705670 7.1:+10345697 MS.gene018653:CDS
GAGACGAAATATCTTCAATG+GGG 0.720068 7.1:-10347195 None:intergenic
TCAAGCTAATGGTAGTACCA+CGG 0.727330 7.1:+10350540 MS.gene018653:CDS
AAGATCGTTAGAATATCCAG+GGG 0.749204 7.1:-10345432 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTCGTTTTTTAATAAAAAAA+CGG + chr7.1:10349106-10349125 MS.gene018653:intron 10.0%
!! AACAGATAAACAAAAAATTA+TGG + chr7.1:10348288-10348307 MS.gene018653:intron 15.0%
!! AATTTATTTAAGAAACATGT+TGG + chr7.1:10345892-10345911 MS.gene018653:intron 15.0%
!! ACAGATAAACAAAAAATTAT+GGG + chr7.1:10348289-10348308 MS.gene018653:intron 15.0%
!! ATTTATCATCTATAACTTAA+TGG + chr7.1:10348798-10348817 MS.gene018653:intron 15.0%
!! ATTTATTTAAGAAACATGTT+GGG + chr7.1:10345893-10345912 MS.gene018653:intron 15.0%
!! TATGTAAAAAAGAATTTGAA+TGG + chr7.1:10346672-10346691 MS.gene018653:intron 15.0%
!! TGTAATTAATTACACAAATA+AGG - chr7.1:10347122-10347141 None:intergenic 15.0%
!!! TAAGATTTTCTATTTTCTTT+CGG - chr7.1:10347950-10347969 None:intergenic 15.0%
!!! TCGTTTTTTAATAAAAAAAC+GGG + chr7.1:10349107-10349126 MS.gene018653:intron 15.0%
!!! TGAATAATCGTTTTTTTTAA+TGG + chr7.1:10348829-10348848 MS.gene018653:intron 15.0%
!! AAAGAATTAAGATCTTACTT+TGG - chr7.1:10346175-10346194 None:intergenic 20.0%
!! AAAGGAAGTAGAATAATATT+CGG + chr7.1:10349075-10349094 MS.gene018653:intron 20.0%
!! AACAATACATAACAAAATAG+AGG - chr7.1:10347267-10347286 None:intergenic 20.0%
!! AACCAAAATATTGTATACAA+AGG - chr7.1:10346741-10346760 None:intergenic 20.0%
!! AAGCACATAAAAAATAATTG+AGG - chr7.1:10346207-10346226 None:intergenic 20.0%
!! AATCTAATCAATCAATCTAA+AGG + chr7.1:10347669-10347688 MS.gene018653:intron 20.0%
!! ACCAAAATATTGTATACAAA+GGG - chr7.1:10346740-10346759 None:intergenic 20.0%
!! ATGATATATGCATAATTACT+AGG - chr7.1:10348250-10348269 None:intergenic 20.0%
!! CTAATAAAAGATTAGACTAA+AGG - chr7.1:10346978-10346997 None:intergenic 20.0%
!! CTACATTTCAAACAATATTA+CGG - chr7.1:10350168-10350187 None:intergenic 20.0%
!! CTATAAAAGCAATAAATAAG+TGG + chr7.1:10349214-10349233 MS.gene018653:intron 20.0%
!! GGGAAAAAAGAAAATATTTA+AGG - chr7.1:10350071-10350090 None:intergenic 20.0%
!! TATTTGAATATAAGCATTCA+AGG - chr7.1:10346353-10346372 None:intergenic 20.0%
!! TCTATGTCTCTATTTATAAA+AGG + chr7.1:10348122-10348141 MS.gene018653:intron 20.0%
!! TGTTAGTATGTTAATTGTTA+TGG + chr7.1:10348856-10348875 MS.gene018653:intron 20.0%
!! TTACTGTATTCTTCAAATAA+TGG + chr7.1:10345542-10345561 MS.gene018653:CDS 20.0%
!! TTATGTATTGTTGTATTTCT+AGG + chr7.1:10347275-10347294 MS.gene018653:intron 20.0%
!! TTATTTGAAGAATACAGTAA+TGG - chr7.1:10345542-10345561 None:intergenic 20.0%
!! TTGACAAAATGTTATCTTTA+TGG - chr7.1:10349937-10349956 None:intergenic 20.0%
!!! AAATAAAATGTCACTTAATC+TGG + chr7.1:10349698-10349717 MS.gene018653:intron 20.0%
!!! AAATACTTTTAGGATTTACT+CGG + chr7.1:10348981-10349000 MS.gene018653:intron 20.0%
!!! AATAAAATGTCACTTAATCT+GGG + chr7.1:10349699-10349718 MS.gene018653:intron 20.0%
!!! AGTGTGAATAAAATACTTTT+AGG + chr7.1:10348971-10348990 MS.gene018653:intron 20.0%
!!! CAAATTTTTGCATATTAGTT+AGG + chr7.1:10346476-10346495 MS.gene018653:intron 20.0%
!!! CTATATTTGACTTCTTTAAA+GGG + chr7.1:10347380-10347399 MS.gene018653:intron 20.0%
!!! TATATTTGACTTCTTTAAAG+GGG + chr7.1:10347381-10347400 MS.gene018653:intron 20.0%
!!! TCTATATTTGACTTCTTTAA+AGG + chr7.1:10347379-10347398 MS.gene018653:intron 20.0%
!!! TGATAAATTTCTAAAAGTCA+TGG - chr7.1:10348786-10348805 None:intergenic 20.0%
!!! TTTTAGAAGTAGTAAGATTT+TGG - chr7.1:10349538-10349557 None:intergenic 20.0%
! AAAAGCAATAAATAAGTGGA+TGG + chr7.1:10349218-10349237 MS.gene018653:intron 25.0%
! AAGTCTTAAATTGTTGTCTA+TGG + chr7.1:10346707-10346726 MS.gene018653:intron 25.0%
! AATTGCCTTTATTAAGTAGA+TGG + chr7.1:10346555-10346574 MS.gene018653:intron 25.0%
! ACAGTTCATTGGAAAAAAAA+TGG - chr7.1:10347519-10347538 None:intergenic 25.0%
! ATATGCATGTGCATTTAAAA+CGG + chr7.1:10347473-10347492 MS.gene018653:intron 25.0%
! ATATTACTAGCTAGGATAAT+TGG - chr7.1:10347797-10347816 None:intergenic 25.0%
! CAAAAAAAAATGTCTTGAAG+AGG - chr7.1:10350035-10350054 None:intergenic 25.0%
! CAATAAAAAAGTTCACTGTT+AGG - chr7.1:10347027-10347046 None:intergenic 25.0%
! GAAACTATATAGATAAAGTG+AGG - chr7.1:10349389-10349408 None:intergenic 25.0%
! GAACAGCATATAAAACATTT+AGG - chr7.1:10347629-10347648 None:intergenic 25.0%
! GGTAAAAATTTAATAGCCAA+TGG - chr7.1:10346518-10346537 None:intergenic 25.0%
! GGTTATGAGAATATGATATT+TGG - chr7.1:10349426-10349445 None:intergenic 25.0%
! GTCAATTTACATAATAGAAC+TGG + chr7.1:10349292-10349311 MS.gene018653:intron 25.0%
! GTGAATAAATTCAAGGAAAA+TGG + chr7.1:10349036-10349055 MS.gene018653:intron 25.0%
! TACTTGGTTATTATCAATTG+AGG - chr7.1:10345666-10345685 None:intergenic 25.0%
! TATCATCTGTTAATCTGATA+AGG + chr7.1:10348264-10348283 MS.gene018653:intron 25.0%
! TATTATTCTACTTCCTTTAC+AGG - chr7.1:10349073-10349092 None:intergenic 25.0%
! TCTTTGAATCTAACACAAAA+GGG - chr7.1:10350317-10350336 None:intergenic 25.0%
! TGATTGATTAGATTAGATGT+TGG - chr7.1:10347663-10347682 None:intergenic 25.0%
! TGTAAATTGACTATGCATTT+AGG - chr7.1:10349283-10349302 None:intergenic 25.0%
! TGTATAATTGTAGATACTTG+TGG + chr7.1:10349805-10349824 MS.gene018653:intron 25.0%
! TTCTTTGAATCTAACACAAA+AGG - chr7.1:10350318-10350337 None:intergenic 25.0%
!! AAAGTCATCTTCACAATTTT+CGG + chr7.1:10345953-10345972 MS.gene018653:CDS 25.0%
!! AGTATTTTATTCACACTAGT+TGG - chr7.1:10348968-10348987 None:intergenic 25.0%
!! ATATTTGACTTCTTTAAAGG+GGG + chr7.1:10347382-10347401 MS.gene018653:intron 25.0%
!! CAATTTCTTAGACAACATTT+TGG + chr7.1:10347311-10347330 MS.gene018653:intron 25.0%
!! CTTTTATTAGATTTGCGTAT+TGG + chr7.1:10346988-10347007 MS.gene018653:intron 25.0%
!! GAATATGATATTTGGTGAAA+AGG - chr7.1:10349418-10349437 None:intergenic 25.0%
!! GGAAATCATTTTCTCAAAAA+TGG - chr7.1:10346827-10346846 None:intergenic 25.0%
!! GTATTTTATTCACACTAGTT+GGG - chr7.1:10348967-10348986 None:intergenic 25.0%
!! TATTTTATTCACACTAGTTG+GGG - chr7.1:10348966-10348985 None:intergenic 25.0%
!! TCATTCTCTTTTACAAATCA+AGG - chr7.1:10350007-10350026 None:intergenic 25.0%
!! TCTTTTACAAATCAAGGAAT+GGG - chr7.1:10350001-10350020 None:intergenic 25.0%
!! TTGTCAGATTTTCTGTTAAT+TGG + chr7.1:10346581-10346600 MS.gene018653:intron 25.0%
!!! ATATTTGGTTTTGTTGTAGT+GGG + chr7.1:10347563-10347582 MS.gene018653:intron 25.0%
!!! ATTATGAAAGATACTGATTC+AGG + chr7.1:10347912-10347931 MS.gene018653:intron 25.0%
!!! CATTTTTGGATAAACTGATT+AGG + chr7.1:10350106-10350125 MS.gene018653:intron 25.0%
!!! TACAATTTGTTGAATACTGT+TGG + chr7.1:10347147-10347166 MS.gene018653:intron 25.0%
!!! TAGACATTTTTAATTAGAGC+AGG - chr7.1:10348203-10348222 None:intergenic 25.0%
AAATTCCAAGTTTCTCGATA+TGG - chr7.1:10346621-10346640 None:intergenic 30.0%
AAGAGCCATCTACTTAATAA+AGG - chr7.1:10346563-10346582 None:intergenic 30.0%
AATGCACATTTCGTTCATTT+GGG + chr7.1:10349637-10349656 MS.gene018653:intron 30.0%
AATTCTACAGCAAACTTTAC+AGG - chr7.1:10346539-10346558 None:intergenic 30.0%
ACATCAACACATTATTCCAA+TGG + chr7.1:10345581-10345600 MS.gene018653:CDS 30.0%
ACGCAGTAGTTAAAATTCAA+TGG - chr7.1:10346848-10346867 None:intergenic 30.0%
AGAGACGAAATATCTTCAAT+GGG - chr7.1:10347199-10347218 None:intergenic 30.0%
ATGTCTAACTAATTCCTAGT+TGG + chr7.1:10348216-10348235 MS.gene018653:intron 30.0%
CAAAAATTTGTCCATGCAAA+AGG - chr7.1:10346466-10346485 None:intergenic 30.0%
CTAGAATGATATTACTAGCT+AGG - chr7.1:10347805-10347824 None:intergenic 30.0%
CTTTATGCATATGGCATTTA+GGG + chr7.1:10350188-10350207 MS.gene018653:intron 30.0%
CTTTGAATCTAACACAAAAG+GGG - chr7.1:10350316-10350335 None:intergenic 30.0%
GAGCATTACTCTATATTTCA+AGG - chr7.1:10347100-10347119 None:intergenic 30.0%
GAGCTTAGTGAATAAATTCA+AGG + chr7.1:10349029-10349048 MS.gene018653:intron 30.0%
GAGTAAAATGCTAGAAAAGT+AGG + chr7.1:10348334-10348353 MS.gene018653:intron 30.0%
GCAAAGTTATAACAGTTCAT+TGG - chr7.1:10347530-10347549 None:intergenic 30.0%
GTAATGAAAACCTTAACCTT+TGG - chr7.1:10345836-10345855 None:intergenic 30.0%
TAACTACTGCGTAATTAGTT+GGG + chr7.1:10346856-10346875 MS.gene018653:intron 30.0%
TAATGCACATTTCGTTCATT+TGG + chr7.1:10349636-10349655 MS.gene018653:intron 30.0%
TAGAGACGAAATATCTTCAA+TGG - chr7.1:10347200-10347219 None:intergenic 30.0%
TATGCATAATTACTAGGAAC+AGG - chr7.1:10348244-10348263 None:intergenic 30.0%
TGTCTAACTAATTCCTAGTT+GGG + chr7.1:10348217-10348236 MS.gene018653:intron 30.0%
TGTTATAACTTTGCAACAGT+AGG + chr7.1:10347536-10347555 MS.gene018653:intron 30.0%
TTAACTACTGCGTAATTAGT+TGG + chr7.1:10346855-10346874 MS.gene018653:intron 30.0%
TTGCATATTAGTTAGGACAT+AGG + chr7.1:10346483-10346502 MS.gene018653:intron 30.0%
TTTCCATTCATCATTGATGT+CGG + chr7.1:10347736-10347755 MS.gene018653:intron 30.0%
TTTGAATCTAACACAAAAGG+GGG - chr7.1:10350315-10350334 None:intergenic 30.0%
! ACGATACTTTGACTTCTAAT+TGG + chr7.1:10345774-10345793 MS.gene018653:CDS 30.0%
! AGATCTTTTTCCACATAAGT+CGG - chr7.1:10345341-10345360 None:intergenic 30.0%
! AGGATTTGTTTGTTTCTTCT+TGG + chr7.1:10350126-10350145 MS.gene018653:intron 30.0%
! AGTTTTCTAAGCGAAATGAT+TGG + chr7.1:10345720-10345739 MS.gene018653:CDS 30.0%
! ATTAGATGTTGGTAAAAGCT+CGG - chr7.1:10347652-10347671 None:intergenic 30.0%
! CTCTTTTACAAATCAAGGAA+TGG - chr7.1:10350002-10350021 None:intergenic 30.0%
! GCCCTTTGTATACAATATTT+TGG + chr7.1:10346736-10346755 MS.gene018653:intron 30.0%
! GGATTTGTTTGTTTCTTCTT+GGG + chr7.1:10350127-10350146 MS.gene018653:intron 30.0%
! GTATTATAATGCCTTTTGCA+TGG + chr7.1:10346452-10346471 MS.gene018653:intron 30.0%
! TAATGTGTTGATGTTGTAGA+AGG - chr7.1:10345575-10345594 None:intergenic 30.0%
! TATGTCTCTATGTAAGCTTT+TGG + chr7.1:10348461-10348480 MS.gene018653:intron 30.0%
! TATTTTCTTTTTTCCCCTTC+TGG + chr7.1:10350075-10350094 MS.gene018653:intron 30.0%
! TCAAGTCATATAAGTTCTAG+TGG + chr7.1:10345383-10345402 MS.gene018653:CDS 30.0%
! TTGTGAAGATGACTTTGAAA+TGG - chr7.1:10345949-10345968 None:intergenic 30.0%
! TTTAACCTCCTTTTCAAACT+AGG + chr7.1:10349510-10349529 MS.gene018653:intron 30.0%
! TTTTATGTGCTTCTTTCTAC+AGG + chr7.1:10346215-10346234 MS.gene018653:intron 30.0%
! TTTTGGATCCTAGTTTGAAA+AGG - chr7.1:10349521-10349540 None:intergenic 30.0%
!! ACTCATTTTGTTTCTTTAGG+CGG + chr7.1:10345917-10345936 MS.gene018653:intron 30.0%
!! ATTATGGGTGTTTTCAAGAT+TGG + chr7.1:10348304-10348323 MS.gene018653:intron 30.0%
!! GAAATGTAGCTTTATGCATA+TGG + chr7.1:10350179-10350198 MS.gene018653:intron 30.0%
!! GGAACTCATTTTGTTTCTTT+AGG + chr7.1:10345914-10345933 MS.gene018653:intron 30.0%
!! GTATTCTTCAAATAATGGAC+CGG + chr7.1:10345547-10345566 MS.gene018653:CDS 30.0%
!!! AGTGAACTTTTTTATTGACC+GGG + chr7.1:10347030-10347049 MS.gene018653:intron 30.0%
!!! CAGTGAACTTTTTTATTGAC+CGG + chr7.1:10347029-10347048 MS.gene018653:intron 30.0%
!!! CATATTTGGTTTTGTTGTAG+TGG + chr7.1:10347562-10347581 MS.gene018653:intron 30.0%
!!! GGTCATTTGTTTTGTTTGAA+GGG + chr7.1:10347757-10347776 MS.gene018653:intron 30.0%
AAAAATGTCCTGATTCCAGA+AGG - chr7.1:10350093-10350112 None:intergenic 35.0%
AAAATGTCCTGATTCCAGAA+GGG - chr7.1:10350092-10350111 None:intergenic 35.0%
AAATCAAGAAAACTAGGCAG+GGG - chr7.1:10345632-10345651 None:intergenic 35.0%
AAATGGTACATACCTGTAAG+TGG - chr7.1:10346307-10346326 None:intergenic 35.0%
AAATGGTTTACCCTTACATG+AGG - chr7.1:10346810-10346829 None:intergenic 35.0%
AACATCAAATGCACAAAACC+CGG - chr7.1:10347051-10347070 None:intergenic 35.0%
AAGATCGTTAGAATATCCAG+GGG - chr7.1:10345435-10345454 None:intergenic 35.0%
ACACAGACATGAATAGTGAT+TGG + chr7.1:10348548-10348567 MS.gene018653:intron 35.0%
ACCATTTGCTTTATCTTCCA+AGG + chr7.1:10346320-10346339 MS.gene018653:intron 35.0%
AGAAATCAAGAAAACTAGGC+AGG - chr7.1:10345634-10345653 None:intergenic 35.0%
AGAAGAAAAACGTCTTACAG+TGG + chr7.1:10348016-10348035 MS.gene018653:intron 35.0%
ATGCACATTTCGTTCATTTG+GGG + chr7.1:10349638-10349657 MS.gene018653:intron 35.0%
ATTAGTTAGGACATAGGATG+AGG + chr7.1:10346489-10346508 MS.gene018653:intron 35.0%
ATTGCTTCTCAAACATCATC+TGG - chr7.1:10350378-10350397 None:intergenic 35.0%
ATTTCGCTTAGAAAACTCCT+CGG - chr7.1:10345717-10345736 None:intergenic 35.0%
CAAAACTCTTTGACTCTCTT+CGG - chr7.1:10346918-10346937 None:intergenic 35.0%
CAAATCTCAACAAGCTTCTA+AGG + chr7.1:10350606-10350625 MS.gene018653:CDS 35.0%
CAGCAGATGAGATAACTTTA+CGG - chr7.1:10347890-10347909 None:intergenic 35.0%
CATCAATAAAGTCTACAGCA+AGG + chr7.1:10348371-10348390 MS.gene018653:intron 35.0%
CTAAGTTATATGGATCAGGA+AGG + chr7.1:10348396-10348415 MS.gene018653:intron 35.0%
CTATCTGGAGAAAATCATGT+TGG + chr7.1:10346014-10346033 MS.gene018653:CDS 35.0%
CTCACATTAAGTGGTGTTTA+AGG + chr7.1:10349176-10349195 MS.gene018653:intron 35.0%
CTCTCCTACCAAAAATGAAT+TGG + chr7.1:10350480-10350499 MS.gene018653:CDS 35.0%
CTGTATCAGATCATCTGAAA+AGG - chr7.1:10350287-10350306 None:intergenic 35.0%
GAAATCAAGAAAACTAGGCA+GGG - chr7.1:10345633-10345652 None:intergenic 35.0%
GAAGATCGTTAGAATATCCA+GGG - chr7.1:10345436-10345455 None:intergenic 35.0%
GAGACATAGAATGTAAGAGA+AGG - chr7.1:10348112-10348131 None:intergenic 35.0%
GAGACGAAATATCTTCAATG+GGG - chr7.1:10347198-10347217 None:intergenic 35.0%
GATAATAACCAAGTAGAGAG+CGG + chr7.1:10345671-10345690 MS.gene018653:CDS 35.0%
GATCTTTCAATTGAGAAAGC+AGG - chr7.1:10345209-10345228 None:intergenic 35.0%
GCAACAGTAGGTAACATATT+TGG + chr7.1:10347548-10347567 MS.gene018653:intron 35.0%
GCAGAGAAATCAAGAAAACT+AGG - chr7.1:10345638-10345657 None:intergenic 35.0%
GCTTTATGCATATGGCATTT+AGG + chr7.1:10350187-10350206 MS.gene018653:intron 35.0%
GTCTAACTAATTCCTAGTTG+GGG + chr7.1:10348218-10348237 MS.gene018653:intron 35.0%
TATTCAAGATCTTGAGCCAA+AGG + chr7.1:10345817-10345836 MS.gene018653:CDS 35.0%
TCAACGAAATGCAGAAATAC+AGG + chr7.1:10346380-10346399 MS.gene018653:intron 35.0%
TCATGTTAAAAGCCACTTAC+AGG + chr7.1:10346292-10346311 MS.gene018653:CDS 35.0%
TCCTTGGAAGATAAAGCAAA+TGG - chr7.1:10346324-10346343 None:intergenic 35.0%
TGAAGATCGTTAGAATATCC+AGG - chr7.1:10345437-10345456 None:intergenic 35.0%
TTGAATCTAACACAAAAGGG+GGG - chr7.1:10350314-10350333 None:intergenic 35.0%
TTTGAGAAGCAATGCAAATC+TGG + chr7.1:10350385-10350404 MS.gene018653:CDS 35.0%
! AAAGGCATGACAACTATAAG+AGG - chr7.1:10350269-10350288 None:intergenic 35.0%
! AGTGTTTTTCATGAGGTGAA+AGG - chr7.1:10345469-10345488 None:intergenic 35.0%
! ATTTGTTGAATACTGTTGGC+AGG + chr7.1:10347151-10347170 MS.gene018653:intron 35.0%
! CTTACAGTGGTATCTTTTCT+AGG + chr7.1:10348029-10348048 MS.gene018653:intron 35.0%
! CTTGCTGTAGACTTTATTGA+TGG - chr7.1:10348373-10348392 None:intergenic 35.0%
! GGATGCTTCCAATTCATTTT+TGG - chr7.1:10350491-10350510 None:intergenic 35.0%
! GTGTTTTTCATGAGGTGAAA+GGG - chr7.1:10345468-10345487 None:intergenic 35.0%
! GTTGTTGTGTGTAAGCTTTT+TGG + chr7.1:10348506-10348525 MS.gene018653:intron 35.0%
! TCATTGCTTGTTGAAGCAAA+TGG - chr7.1:10349447-10349466 None:intergenic 35.0%
! TTAGATGTTGGTAAAAGCTC+GGG - chr7.1:10347651-10347670 None:intergenic 35.0%
! TTTTGTTCTTGACACAGTTC+AGG - chr7.1:10348065-10348084 None:intergenic 35.0%
!! CAGCAAGGTTCTAAGTTATA+TGG + chr7.1:10348386-10348405 MS.gene018653:intron 35.0%
!! CTTAGAAGCTTGTTGAGATT+TGG - chr7.1:10350608-10350627 None:intergenic 35.0%
!! GGTTCTAAGTTATATGGATC+AGG + chr7.1:10348392-10348411 MS.gene018653:intron 35.0%
!! TGAATTGGAAGCATCCAAAA+TGG + chr7.1:10350495-10350514 MS.gene018653:CDS 35.0%
!!! CGGTCATTTGTTTTGTTTGA+AGG + chr7.1:10347756-10347775 MS.gene018653:intron 35.0%
!!! CTTCTAGAGTGTTTTTCATG+AGG - chr7.1:10345476-10345495 None:intergenic 35.0%
!!! GAGAATGTAGCTTTTGAAAC+TGG + chr7.1:10347697-10347716 MS.gene018653:intron 35.0%
!!! GCTTCCAATTCATTTTTGGT+AGG - chr7.1:10350487-10350506 None:intergenic 35.0%
!!! TTCTGGAATCAGGACATTTT+TGG + chr7.1:10350092-10350111 MS.gene018653:intron 35.0%
AAAATGGACCATTGCAAGTC+AGG + chr7.1:10350511-10350530 MS.gene018653:CDS 40.0%
AAATGTCCTGATTCCAGAAG+GGG - chr7.1:10350091-10350110 None:intergenic 40.0%
AACACCACTTAATGTGAGAC+AGG - chr7.1:10349174-10349193 None:intergenic 40.0%
AACCATTGCATCATTGACAG+TGG + chr7.1:10348582-10348601 MS.gene018653:intron 40.0%
ACACCACTTAATGTGAGACA+GGG - chr7.1:10349173-10349192 None:intergenic 40.0%
AGATCTTGAGCCAAAGGTTA+AGG + chr7.1:10345823-10345842 MS.gene018653:intron 40.0%
ATCTTCCAACTCTGAATCAG+TGG + chr7.1:10347976-10347995 MS.gene018653:intron 40.0%
ATTCAGAGTTGGAAGATGGT+GGG - chr7.1:10347973-10347992 None:intergenic 40.0%
CCCAGCAACTGAATAACATA+GGG + chr7.1:10345234-10345253 MS.gene018653:CDS 40.0%
CCCTATGTTATTCAGTTGCT+GGG - chr7.1:10345237-10345256 None:intergenic 40.0%
CGTAAAGTTATCTCATCTGC+TGG + chr7.1:10347888-10347907 MS.gene018653:intron 40.0%
CTAAAATAGCGTGCTTTGCT+GGG + chr7.1:10349552-10349571 MS.gene018653:intron 40.0%
CTCGGATTATCTACTTCAAC+TGG + chr7.1:10348999-10349018 MS.gene018653:intron 40.0%
CTGAAGCTCATGAAAGTTGA+AGG + chr7.1:10346257-10346276 MS.gene018653:CDS 40.0%
CTGAATAACATAGGGATGTC+TGG + chr7.1:10345242-10345261 MS.gene018653:CDS 40.0%
GCATTCAAGGAAACAATCCT+TGG - chr7.1:10346340-10346359 None:intergenic 40.0%
GTCATTGAGTAACATGGCTT+CGG + chr7.1:10345514-10345533 MS.gene018653:CDS 40.0%
GTCTAAACACAGTGTCTTAG+TGG + chr7.1:10349135-10349154 MS.gene018653:intron 40.0%
TAAAATAGCGTGCTTTGCTG+GGG + chr7.1:10349553-10349572 MS.gene018653:intron 40.0%
TAAATTGCACCCCTCTTTAG+AGG + chr7.1:10347595-10347614 MS.gene018653:intron 40.0%
TACCACTGTCAATGATGCAA+TGG - chr7.1:10348587-10348606 None:intergenic 40.0%
TATAGACCAGAGTCATCTGA+AGG + chr7.1:10346412-10346431 MS.gene018653:CDS 40.0%
TATGTACCTTCAGATGACTC+TGG - chr7.1:10346421-10346440 None:intergenic 40.0%
TCAAGCTAATGGTAGTACCA+CGG + chr7.1:10350540-10350559 MS.gene018653:CDS 40.0%
TCAGCCATTGAAAATCCATC+TGG + chr7.1:10350433-10350452 MS.gene018653:CDS 40.0%
TCCCTATGTTATTCAGTTGC+TGG - chr7.1:10345238-10345257 None:intergenic 40.0%
TCTTCCAACTCTGAATCAGT+GGG + chr7.1:10347977-10347996 MS.gene018653:intron 40.0%
TGAATCTAACACAAAAGGGG+GGG - chr7.1:10350313-10350332 None:intergenic 40.0%
TGACCGACATCAATGATGAA+TGG - chr7.1:10347742-10347761 None:intergenic 40.0%
TGAGTTAAGGGTTAAGGAGT+TGG - chr7.1:10348922-10348941 None:intergenic 40.0%
TGCACATTTCGTTCATTTGG+GGG + chr7.1:10349639-10349658 MS.gene018653:intron 40.0%
TGGATCCTAGTTTGAAAAGG+AGG - chr7.1:10349518-10349537 None:intergenic 40.0%
TGTTGTGTGTGTTAGTGACT+TGG - chr7.1:10347837-10347856 None:intergenic 40.0%
TTCGCAGTCATTGAGTAACA+TGG + chr7.1:10345508-10345527 MS.gene018653:CDS 40.0%
TTCTAAGCGAAATGATTGGC+AGG + chr7.1:10345724-10345743 MS.gene018653:CDS 40.0%
TTGCTCCATATCGAGAAACT+TGG + chr7.1:10346613-10346632 MS.gene018653:intron 40.0%
TTTGGTAGGAGAGTCTTTCA+TGG - chr7.1:10350473-10350492 None:intergenic 40.0%
! ACGGTTTGAGTTAAGGGTTA+AGG - chr7.1:10348928-10348947 None:intergenic 40.0%
! ACTGATTCAGAGTTGGAAGA+TGG - chr7.1:10347977-10347996 None:intergenic 40.0%
! AGCTCAAACGGTTTGAGTTA+AGG - chr7.1:10348935-10348954 None:intergenic 40.0%
! AGGAAATGACTCCTCTAAAG+AGG - chr7.1:10347609-10347628 None:intergenic 40.0%
! ATAAGTTCTAGTGGAGCAGT+TGG + chr7.1:10345392-10345411 MS.gene018653:CDS 40.0%
! ATCTGGTGTTGAGCCATTTA+AGG + chr7.1:10350402-10350421 MS.gene018653:CDS 40.0%
! CATATGTTTTCATCTTCCCC+TGG + chr7.1:10345416-10345435 MS.gene018653:CDS 40.0%
! CGAAGAGAGTCAAAGAGTTT+TGG + chr7.1:10346916-10346935 MS.gene018653:intron 40.0%
! GAAATGACTCCTCTAAAGAG+GGG - chr7.1:10347607-10347626 None:intergenic 40.0%
! GACGTTTTTCTTCTTGACCA+TGG - chr7.1:10348010-10348029 None:intergenic 40.0%
! GCTCAAACGGTTTGAGTTAA+GGG - chr7.1:10348934-10348953 None:intergenic 40.0%
! GCTGATGATGATGCCTTAAA+TGG - chr7.1:10350418-10350437 None:intergenic 40.0%
! GGAAATGACTCCTCTAAAGA+GGG - chr7.1:10347608-10347627 None:intergenic 40.0%
! GGAATGAAACTAGCCTGTAA+AGG + chr7.1:10349057-10349076 MS.gene018653:intron 40.0%
! GTACTACCATTAGCTTGATC+AGG - chr7.1:10350538-10350557 None:intergenic 40.0%
! GTTGATGTTGTAGAAGGTAC+CGG - chr7.1:10345569-10345588 None:intergenic 40.0%
! GTTTGTTTCTTCTTGGGTCA+TGG + chr7.1:10350133-10350152 MS.gene018653:intron 40.0%
! TAAGTTCTAGTGGAGCAGTT+GGG + chr7.1:10345393-10345412 MS.gene018653:CDS 40.0%
! TATCGTCATCACTGATTAGC+TGG - chr7.1:10345760-10345779 None:intergenic 40.0%
! TCATCTTCACAATTTTCGGC+AGG + chr7.1:10345957-10345976 MS.gene018653:CDS 40.0%
! TCTAAAATAGCGTGCTTTGC+TGG + chr7.1:10349551-10349570 MS.gene018653:intron 40.0%
! TGACAGTGGTATTGAGATCA+CGG + chr7.1:10348596-10348615 MS.gene018653:intron 40.0%
! TGATTTTCTCCAGATAGAGC+TGG - chr7.1:10346011-10346030 None:intergenic 40.0%
!! AGAAGCTTGTTGAGATTTGG+AGG - chr7.1:10350605-10350624 None:intergenic 40.0%
!! CACTCCAGATGGATTTTCAA+TGG - chr7.1:10350440-10350459 None:intergenic 40.0%
!! CATTTTGTTTCTTTAGGCGG+TGG + chr7.1:10345920-10345939 MS.gene018653:intron 40.0%
!! TGACTTGCAATGGTCCATTT+TGG - chr7.1:10350512-10350531 None:intergenic 40.0%
!!! AGCTTTTGAAACTGGACATG+TGG + chr7.1:10347705-10347724 MS.gene018653:intron 40.0%
!!! TAGTTTTTTTCCTCCTTGCC+AGG + chr7.1:10348879-10348898 MS.gene018653:intron 40.0%
!!! TTTTTTCCCCTTCTGGAATC+AGG + chr7.1:10350082-10350101 MS.gene018653:intron 40.0%
AAAGTGAGGAGACTACGACT+TGG - chr7.1:10349375-10349394 None:intergenic 45.0%
AACACAGTGTCTTAGTGGCA+AGG + chr7.1:10349140-10349159 MS.gene018653:intron 45.0%
AACCACAACAACCAAGCCTT+GGG - chr7.1:10348489-10348508 None:intergenic 45.0%
AAGTGAGGAGACTACGACTT+GGG - chr7.1:10349374-10349393 None:intergenic 45.0%
AATCAGTGGGTAGGTATCCA+TGG + chr7.1:10347990-10348009 MS.gene018653:intron 45.0%
ACATAGGATGAGGAGACCAT+TGG + chr7.1:10346499-10346518 MS.gene018653:intron 45.0%
AGGCTGTCAATCAACTTGGT+GGG + chr7.1:10346120-10346139 MS.gene018653:CDS 45.0%
ATCTGTCCTTTGACGCTTAG+GGG - chr7.1:10350668-10350687 None:intergenic 45.0%
ATTCACACTAGTTGGGGAGT+TGG - chr7.1:10348960-10348979 None:intergenic 45.0%
CAACAACTTCCAGCTCTATC+TGG + chr7.1:10345999-10346018 MS.gene018653:CDS 45.0%
CAGATAGAGCTGGAAGTTGT+TGG - chr7.1:10346001-10346020 None:intergenic 45.0%
CAGTTGCGAATAGAAGAGCA+AGG + chr7.1:10350343-10350362 MS.gene018653:CDS 45.0%
CATCTGTCCTTTGACGCTTA+GGG - chr7.1:10350669-10350688 None:intergenic 45.0%
CCAATGGAAACAGTGCTTCA+TGG + chr7.1:10345597-10345616 MS.gene018653:CDS 45.0%
CCTTACATGAGGACAGTGAA+GGG - chr7.1:10346799-10346818 None:intergenic 45.0%
CCTTCACTGTCCTCATGTAA+GGG + chr7.1:10346797-10346816 MS.gene018653:intron 45.0%
GAATCTAACACAAAAGGGGG+GGG - chr7.1:10350312-10350331 None:intergenic 45.0%
GACAGTGAAGGGACAAAGAA+AGG - chr7.1:10346788-10346807 None:intergenic 45.0%
GAGGAACAAGTGAAATGCCT+TGG - chr7.1:10350250-10350269 None:intergenic 45.0%
GATTCAGAGTTGGAAGATGG+TGG - chr7.1:10347974-10347993 None:intergenic 45.0%
GCCCAGCAACTGAATAACAT+AGG + chr7.1:10345233-10345252 MS.gene018653:CDS 45.0%
GCTGCGAATCAGAAAATCTG+GGG - chr7.1:10345319-10345338 None:intergenic 45.0%
GCTTCTCAAACATCATCTGG+AGG - chr7.1:10350375-10350394 None:intergenic 45.0%
GGCTGCGAATCAGAAAATCT+GGG - chr7.1:10345320-10345339 None:intergenic 45.0%
GTTAAGGGTTAAGGAGTTGG+AGG - chr7.1:10348919-10348938 None:intergenic 45.0%
TAATGGTAGTACCACGGTTG+AGG + chr7.1:10350546-10350565 MS.gene018653:CDS 45.0%
TCACATGCATGAACTGTCCA+AGG + chr7.1:10350230-10350249 MS.gene018653:intron 45.0%
TCAGGACCTGATCAAGCTAA+TGG + chr7.1:10350529-10350548 MS.gene018653:CDS 45.0%
TCATCTGTCCTTTGACGCTT+AGG - chr7.1:10350670-10350689 None:intergenic 45.0%
TGAATACTGTTGGCAGGAGT+TGG + chr7.1:10347157-10347176 MS.gene018653:intron 45.0%
TTCACACTAGTTGGGGAGTT+GGG - chr7.1:10348959-10348978 None:intergenic 45.0%
! AAGGGGGAGATGCATTTTAG+AGG + chr7.1:10347398-10347417 MS.gene018653:intron 45.0%
! AGGGGGAGATGCATTTTAGA+GGG + chr7.1:10347399-10347418 MS.gene018653:intron 45.0%
! ATGTAAGCTTTTGGTCCCCA+AGG + chr7.1:10348470-10348489 MS.gene018653:intron 45.0%
! TATGTCTCCTCTAAGGGTGT+TGG - chr7.1:10345296-10345315 None:intergenic 45.0%
!! CCATGAAGCACTGTTTCCAT+TGG - chr7.1:10345600-10345619 None:intergenic 45.0%
!! GCAGAATTTGCTGAGGAAGA+TGG - chr7.1:10346047-10346066 None:intergenic 45.0%
!! TGGAAGTTGTTGGTGACCTT+GGG - chr7.1:10345991-10346010 None:intergenic 45.0%
ACAAATGCCTCGTGAAGCTC+AGG - chr7.1:10346098-10346117 None:intergenic 50.0%
ACCACAACAACCAAGCCTTG+GGG - chr7.1:10348488-10348507 None:intergenic 50.0%
AGCGAAATGATTGGCAGGAG+TGG + chr7.1:10345729-10345748 MS.gene018653:CDS 50.0%
AGTGAGGAGACTACGACTTG+GGG - chr7.1:10349373-10349392 None:intergenic 50.0%
ATGAGCTTCAGCACACCCTT+AGG - chr7.1:10346248-10346267 None:intergenic 50.0%
CAACCACAACAACCAAGCCT+TGG - chr7.1:10348490-10348509 None:intergenic 50.0%
CATCAGCTACCTTTGCTCTG+AGG - chr7.1:10349833-10349852 None:intergenic 50.0%
CCAACTCTGAATCAGTGGGT+AGG + chr7.1:10347981-10348000 MS.gene018653:intron 50.0%
CCCTTACATGAGGACAGTGA+AGG - chr7.1:10346800-10346819 None:intergenic 50.0%
CCCTTCACTGTCCTCATGTA+AGG + chr7.1:10346796-10346815 MS.gene018653:intron 50.0%
CGGCTGCGAATCAGAAAATC+TGG - chr7.1:10345321-10345340 None:intergenic 50.0%
CTCGGTGGCCATAATATTGC+AGG - chr7.1:10345699-10345718 None:intergenic 50.0%
CTGCAATATTATGGCCACCG+AGG + chr7.1:10345697-10345716 MS.gene018653:CDS 50.0%
CTGGGGTATGTCTCCTCTAA+GGG - chr7.1:10345302-10345321 None:intergenic 50.0%
CTTGTGGTACCTCAGAGCAA+AGG + chr7.1:10349821-10349840 MS.gene018653:intron 50.0%
GAGCGGTGCCTGCAATATTA+TGG + chr7.1:10345688-10345707 MS.gene018653:CDS 50.0%
GAGGCTGTCAATCAACTTGG+TGG + chr7.1:10346119-10346138 MS.gene018653:CDS 50.0%
GCGAAATGATTGGCAGGAGT+GGG + chr7.1:10345730-10345749 MS.gene018653:CDS 50.0%
GCTCCCTGTCTCACATTAAG+TGG + chr7.1:10349167-10349186 MS.gene018653:intron 50.0%
GGATGGACAGACAACGATGA+AGG - chr7.1:10345275-10345294 None:intergenic 50.0%
GTGGAGGCTGTCAATCAACT+TGG + chr7.1:10346116-10346135 MS.gene018653:CDS 50.0%
GTGTCAGAAGACACTCCAGA+TGG - chr7.1:10350451-10350470 None:intergenic 50.0%
GTTAAGGAGTTGGAGGTCCA+GGG - chr7.1:10348912-10348931 None:intergenic 50.0%
TCGCTTAGAAAACTCCTCGG+TGG - chr7.1:10345714-10345733 None:intergenic 50.0%
TCTACAGGAGCTACCCCTAA+GGG + chr7.1:10346230-10346249 MS.gene018653:intron 50.0%
TGAGCTTCAGCACACCCTTA+GGG - chr7.1:10346247-10346266 None:intergenic 50.0%
TGCAGATGGAGGTCCAGAAA+CGG + chr7.1:10348631-10348650 MS.gene018653:CDS 50.0%
TGCGAATAGAAGAGCAAGGC+AGG + chr7.1:10350347-10350366 MS.gene018653:CDS 50.0%
TGTCCATCCAACACCCTTAG+AGG + chr7.1:10345286-10345305 MS.gene018653:CDS 50.0%
TTCTACAGGAGCTACCCCTA+AGG + chr7.1:10346229-10346248 MS.gene018653:intron 50.0%
TTTGACGCTTAGGGGCTTGA+GGG - chr7.1:10350660-10350679 None:intergenic 50.0%
! GATCAGGTCCTGACTTGCAA+TGG - chr7.1:10350522-10350541 None:intergenic 50.0%
! TCTGGGGTATGTCTCCTCTA+AGG - chr7.1:10345303-10345322 None:intergenic 50.0%
! TGAGCTTCACGAGGCATTTG+TGG + chr7.1:10346097-10346116 MS.gene018653:CDS 50.0%
! TGATTCGCAGCCGACTTATG+TGG + chr7.1:10345328-10345347 MS.gene018653:CDS 50.0%
!! CCTACCCACTGATTCAGAGT+TGG - chr7.1:10347984-10348003 None:intergenic 50.0%
!! CTGGAAGTTGTTGGTGACCT+TGG - chr7.1:10345992-10346011 None:intergenic 50.0%
!! GGCTGTTGCAGAATTTGCTG+AGG - chr7.1:10346054-10346073 None:intergenic 50.0%
!! GTTGTTGGTGACCTTGGGAT+TGG - chr7.1:10345986-10346005 None:intergenic 50.0%
!! TCTCCTCTAAGGGTGTTGGA+TGG - chr7.1:10345292-10345311 None:intergenic 50.0%
ACGGCTGCATGAACAGCTTG+AGG + chr7.1:10348650-10348669 MS.gene018653:CDS 55.0%
ACTAGGAACAGGCCCCAACT+AGG - chr7.1:10348233-10348252 None:intergenic 55.0%
AGCTCTACGACTGCAGATGG+AGG + chr7.1:10348620-10348639 MS.gene018653:CDS 55.0%
AGTCCATCGCATTCGTGGCT+TGG - chr7.1:10346075-10346094 None:intergenic 55.0%
ATGGACTCCTGAGCTTCACG+AGG + chr7.1:10346088-10346107 MS.gene018653:CDS 55.0%
CTCAAGCCCCTAAGCGTCAA+AGG + chr7.1:10350659-10350678 MS.gene018653:CDS 55.0%
CTTTGACGCTTAGGGGCTTG+AGG - chr7.1:10350661-10350680 None:intergenic 55.0%
GAGCTTCAGCACACCCTTAG+GGG - chr7.1:10346246-10346265 None:intergenic 55.0%
GCTGGAAGCAGTTGAGAAGC+TGG + chr7.1:10350576-10350595 MS.gene018653:CDS 55.0%
GCTGTTCATGCAGCCGTTTC+TGG - chr7.1:10348647-10348666 None:intergenic 55.0%
GGAAGCTCTACGACTGCAGA+TGG + chr7.1:10348617-10348636 MS.gene018653:CDS 55.0%
GGGGAGTTGGGTAGCTCAAA+CGG - chr7.1:10348947-10348966 None:intergenic 55.0%
GGTTAAGGAGTTGGAGGTCC+AGG - chr7.1:10348913-10348932 None:intergenic 55.0%
TCAGGAGTCCATCGCATTCG+TGG - chr7.1:10346080-10346099 None:intergenic 55.0%
TCGCTCGTCTCTCTTTGCTG+TGG + chr7.1:10349885-10349904 MS.gene018653:intron 55.0%
! AGCTTTTGGTCCCCAAGGCT+TGG + chr7.1:10348475-10348494 MS.gene018653:intron 55.0%
! GCTTCACGAGGCATTTGTGG+AGG + chr7.1:10346100-10346119 MS.gene018653:CDS 55.0%
! TCCCCAAGGCTTGGTTGTTG+TGG + chr7.1:10348484-10348503 MS.gene018653:intron 55.0%
ACTTGGGGCTGGAGATGCTG+AGG - chr7.1:10349358-10349377 None:intergenic 60.0%
CACGGTTGAGGAAAGCTCGC+TGG + chr7.1:10350558-10350577 MS.gene018653:CDS 60.0%
CAGCCAAGCCACGAATGCGA+TGG + chr7.1:10346069-10346088 MS.gene018653:CDS 60.0%
CAGCGAGCTTTCCTCAACCG+TGG - chr7.1:10350560-10350579 None:intergenic 60.0%
CCAGGGTTCAAGTCCTGGCA+AGG - chr7.1:10348895-10348914 None:intergenic 60.0%
CCTTGCCAGGACTTGAACCC+TGG + chr7.1:10348892-10348911 MS.gene018653:intron 60.0%
GAGGTCCAGGGTTCAAGTCC+TGG - chr7.1:10348900-10348919 None:intergenic 60.0%
GGGTTCAAGTCCTGGCAAGG+AGG - chr7.1:10348892-10348911 None:intergenic 60.0%
TCGGCAGGACACCAATCCCA+AGG + chr7.1:10345972-10345991 MS.gene018653:CDS 60.0%
! AGGAGACTACGACTTGGGGC+TGG - chr7.1:10349369-10349388 None:intergenic 60.0%
! TGCAGGCACCGCTCTCTACT+TGG - chr7.1:10345682-10345701 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 10345194 10350693 10345194 ID=MS.gene018653
chr7.1 mRNA 10345194 10350693 10345194 ID=MS.gene018653.t1;Parent=MS.gene018653
chr7.1 exon 10345194 10345838 10345194 ID=MS.gene018653.t1.exon1;Parent=MS.gene018653.t1
chr7.1 CDS 10345194 10345838 10345194 ID=cds.MS.gene018653.t1;Parent=MS.gene018653.t1
chr7.1 exon 10345936 10346149 10345936 ID=MS.gene018653.t1.exon2;Parent=MS.gene018653.t1
chr7.1 CDS 10345936 10346149 10345936 ID=cds.MS.gene018653.t1;Parent=MS.gene018653.t1
chr7.1 exon 10346237 10346313 10346237 ID=MS.gene018653.t1.exon3;Parent=MS.gene018653.t1
chr7.1 CDS 10346237 10346313 10346237 ID=cds.MS.gene018653.t1;Parent=MS.gene018653.t1
chr7.1 exon 10346394 10346433 10346394 ID=MS.gene018653.t1.exon4;Parent=MS.gene018653.t1
chr7.1 CDS 10346394 10346433 10346394 ID=cds.MS.gene018653.t1;Parent=MS.gene018653.t1
chr7.1 exon 10347173 10347230 10347173 ID=MS.gene018653.t1.exon5;Parent=MS.gene018653.t1
chr7.1 CDS 10347173 10347230 10347173 ID=cds.MS.gene018653.t1;Parent=MS.gene018653.t1
chr7.1 exon 10348602 10348671 10348602 ID=MS.gene018653.t1.exon6;Parent=MS.gene018653.t1
chr7.1 CDS 10348602 10348671 10348602 ID=cds.MS.gene018653.t1;Parent=MS.gene018653.t1
chr7.1 exon 10350328 10350693 10350328 ID=MS.gene018653.t1.exon7;Parent=MS.gene018653.t1
chr7.1 CDS 10350328 10350693 10350328 ID=cds.MS.gene018653.t1;Parent=MS.gene018653.t1
Gene Sequence

>MS.gene018653

ATGGAAGCTCGTCCTGCTTTCTCAATTGAAAGATCAAGTGCCCAGCAACTGAATAACATAGGGATGTCTGGAGCACTTCCTTCATCGTTGTCTGTCCATCCAACACCCTTAGAGGAGACATACCCCAGATTTTCTGATTCGCAGCCGACTTATGTGGAAAAAGATCTTAAGACAAAAACTTTTAATCATTCAAGTCATATAAGTTCTAGTGGAGCAGTTGGGCATATGTTTTCATCTTCCCCTGGATATTCTAACGATCTTCATCACTCATCCCTTTCACCTCATGAAAAACACTCTAGAAGTGCTCATTTTATTTCGCAGTCATTGAGTAACATGGCTTCGGTGCCATTACTGTATTCTTCAAATAATGGACCGGTACCTTCTACAACATCAACACATTATTCCAATGGAAACAGTGCTTCATGGCATGCAGATCCCCTGCCTAGTTTTCTTGATTTCTCTGCAAATGCCTCAATTGATAATAACCAAGTAGAGAGCGGTGCCTGCAATATTATGGCCACCGAGGAGTTTTCTAAGCGAAATGATTGGCAGGAGTGGGCTGACCAGCTAATCAGTGATGACGATACTTTGACTTCTAATTGGAATGATCTTCTTGCTGATAATATTCAAGATCTTGAGCCAAAGGTTAAGGTTTTCATTACTCAAATCAGTATTAGCTTGCAGAGTAAATGAATAGCAATTTATTTAAGAAACATGTTGGGAACTCATTTTGTTTCTTTAGGCGGTGGAATCCATTTCAAAGTCATCTTCACAATTTTCGGCAGGACACCAATCCCAAGGTCACCAACAACTTCCAGCTCTATCTGGAGAAAATCATGTTGGTGTTGCTCCATCTTCCTCAGCAAATTCTGCAACAGCCAAGCCACGAATGCGATGGACTCCTGAGCTTCACGAGGCATTTGTGGAGGCTGTCAATCAACTTGGTGGGAGTGAAAGTATGTCTATCTCTTTCTCACTCCAAAGTAAGATCTTAATTCTTTAAACTTCTGCCTCAATTATTTTTTATGTGCTTCTTTCTACAGGAGCTACCCCTAAGGGTGTGCTGAAGCTCATGAAAGTTGAAGGATTAACTATATATCATGTTAAAAGCCACTTACAGGTATGTACCATTTGCTTTATCTTCCAAGGATTGTTTCCTTGAATGCTTATATTCAAATATGTTGCTTCAACGAAATGCAGAAATACAGGACAGCTAGATATAGACCAGAGTCATCTGAAGGTACATAAGATATGCATTGTATTATAATGCCTTTTGCATGGACAAATTTTTGCATATTAGTTAGGACATAGGATGAGGAGACCATTGGCTATTAAATTTTTACCTGTAAAGTTTGCTGTAGAATTGCCTTTATTAAGTAGATGGCTCTTGTCAGATTTTCTGTTAATTGGAAACTTACTTTGCTCCATATCGAGAAACTTGGAATTTACGTCAAGTATGCTTTTCGAACATGAGAACATATGTAAAAAAGAATTTGAATGGCGCAAGTGTGTGAAGTCTTAAATTGTTGTCTATGGCTCTTAGCCCTTTGTATACAATATTTTGGTTATCTGTTTTCTTAAGACATTTTTTCCTTTCTTTGTCCCTTCACTGTCCTCATGTAAGGGTAAACCATTTTTGAGAAAATGATTTCCATTGAATTTTAACTACTGCGTAATTAGTTGGGAAATTGCTAAATATAAATCATCTCTTTATATGAAATCCGAAGAGAGTCAAAGAGTTTTGGATTTTCAAATAATTAGTTAAGTATTAACTATAATTTCCTTTAGTCTAATCTTTTATTAGATTTGCGTATTGGAGATATTATGATACCTAACAGTGAACTTTTTTATTGACCGGGTTTTGTGCATTTGATGTTTCTAAGTAGTGTGTCTTTATTATCTTCCTTGAAATATAGAGTAATGCTCCTTATTTGTGTAATTAATTACATGATTTACAATTTGTTGAATACTGTTGGCAGGAGTTGGAGAGAAAAAACTAAGCCCCATTGAAGATATTTCGTCTCTAGATTTGAAAACGTAAGTGAACTATCGACTTTTATTTGATGCTAACCTCTATTTTGTTATGTATTGTTGTATTTCTAGGAATATTGATACATCAATTTCTTAGACAACATTTTGGTTCTCTAATATGACTTTGCTAATACAAATATTCAAATTTTAAATATCTATATTTGACTTCTTTAAAGGGGGAGATGCATTTTAGAGGGTAAAGTGAAGAGCGATAAATGTTGATTAGAAATAAGAGATTATGATAAAATATATGCATGTGCATTTAAAACGGTAAAGTTGTTAAAATCTAGACCATTTTTTTTCCAATGAACTGTTATAACTTTGCAACAGTAGGTAACATATTTGGTTTTGTTGTAGTGGGTTAGATGAGTAAATTGCACCCCTCTTTAGAGGAGTCATTTCCTAAATGTTTTATATGCTGTTCCCGAGCTTTTACCAACATCTAATCTAATCAATCAATCTAAAGGTAAAAGAGAATGTAGCTTTTGAAACTGGACATGTGGACAGACGTTTTCCATTCATCATTGATGTCGGTCATTTGTTTTGTTTGAAGGGAAAAAGTTGCATGTCCAATTATCCTAGCTAGTAATATCATTCTAGAGATTGACACCAAGTCACTAACACACACAACACTGACATGTAAACTTGCATAGAAATTAGCGCCGTAAAGTTATCTCATCTGCTGGCATTATGAAAGATACTGATTCAGGTATCAAGACTAACCGAAAGAAAATAGAAAATCTTACCCACCATCTTCCAACTCTGAATCAGTGGGTAGGTATCCATGGTCAAGAAGAAAAACGTCTTACAGTGGTATCTTTTCTAGGAATTCAAGAGCCTGAACTGTGTCAAGAACAAAAATATATCTAATAATCAACTAACTGCCTTCTCTTACATTCTATGTCTCTATTTATAAAAGGATGACTAGTAACTACTACAACGACTCTCAACTACTACAACGACTCTCTTGACAAGCCTGCTCTAATTAAAAATGTCTAACTAATTCCTAGTTGGGGCCTGTTCCTAGTAATTATGCATATATCATCTGTTAATCTGATAAGGTAACAGATAAACAAAAAATTATGGGTGTTTTCAAGATTGGATACTATGAGTAAAATGCTAGAAAAGTAGGATTTTAAGATAATCCATCAATAAAGTCTACAGCAAGGTTCTAAGTTATATGGATCAGGAAGGTACTTTTTGATAGCAATGCATCAATGCAGATTAAATATTTTTTATGTCTCTATGTAAGCTTTTGGTCCCCAAGGCTTGGTTGTTGTGGTTGTTGTGTGTAAGCTTTTTGGTCATATTTCATACACAGTAACACAGACATGAATAGTGATTGGTATACTGACTTAACCATTGCATCATTGACAGTGGTATTGAGATCACGGAAGCTCTACGACTGCAGATGGAGGTCCAGAAACGGCTGCATGAACAGCTTGAGGTTTGAATTTATTCTTTTTGTGAATTTTCTTCTGATATGCTCATTTGATTGTTAAAAGATTAGAAATGTGACTTGAAGACTTGTAAGCAAGCTCTATTTTTGTTGCAATTGCCATGACTTTTAGAAATTTATCATCTATAACTTAATGGAATTAGTGTGAATAATCGTTTTTTTTAATGGCAAATGTTAGTATGTTAATTGTTATGGTAGTTTTTTTCCTCCTTGCCAGGACTTGAACCCTGGACCTCCAACTCCTTAACCCTTAACTCAAACCGTTTGAGCTACCCAACTCCCCAACTAGTGTGAATAAAATACTTTTAGGATTTACTCGGATTATCTACTTCAACTGGTGTTTCTGAGCTTAGTGAATAAATTCAAGGAAAATGGAATGAAACTAGCCTGTAAAGGAAGTAGAATAATATTCGGTACTTCTGTTCGTTTTTTAATAAAAAAACGGGTAGTTGTCTAAACACAGTGTCTTAGTGGCAAGGTTATGCTCCCTGTCTCACATTAAGTGGTGTTTAAGGTTTTTTCAGAAGAATCTATAAAAGCAATAAATAAGTGGATGGTTGTAACAATTTTACTAAATCATCGTTATTAACTATTGTCCTAAATGCATAGTCAATTTACATAATAGAACTGGCTATTTTGCTTTTGCATTTTAACAAAATAATTTTGAATAGCCTCAGCATCTCCAGCCCCAAGTCGTAGTCTCCTCACTTTATCTATATAGTTTCTACAGTCCTTTTCACCAAATATCATATTCTCATAACCATTTGCTTCAACAAGCAATGATCGAAAATTTCTGCTTACATTTATTCCAGCTTGATCATTGAGTTTTAACCTCCTTTTCAAACTAGGATCCAAAATCTTACTACTTCTAAAATAGCGTGCTTTGCTGGGGCTTATTAGATCATGATTATGCTCAAGAAATATTTTTTTAATAAGTATAATGATTTGAAAGTAATGCACATTTCGTTCATTTGGGGGAGTAACTAAAAAACTTAAAATTAAGTTTTATTGAAAAAATAAAATGTCACTTAATCTGGGAGCATCTTTACAGTTTAATACATGATAAGTTTAACATGCATTACAAAAATATGAACATCTTTGCAGTCATTAGATTAGTGTCATGTATAATTGTAGATACTTGTGGTACCTCAGAGCAAAGGTAGCTGATGTTGATTCTCTTTGTGCACTTATCAATTGAAATTCGCTCGTCTCTCTTTGCTGTGGAGTATGAATTAAAAATGAGATACTAACCATAAAGATAACATTTTGTCAAAAAAAACATCATAAAGATAACATGTTAATTTATAGTTGATGCCCATTCCTTGATTTGTAAAAGAGAATGATCTATCCTCTTCAAGACATTTTTTTTTGCAAAAAATCTAAGCCTTAAATATTTTCTTTTTTCCCCTTCTGGAATCAGGACATTTTTGGATAAACTGATTAGGATTTGTTTGTTTCTTCTTGGGTCATGGAATTAACTTCCGTAATATTGTTTGAAATGTAGCTTTATGCATATGGCATTTAGGGTTATGTTGCTTCTGTCACGTCACATGCATGAACTGTCCAAGGCATTTCACTTGTTCCTCTTATAGTTGTCATGCCTTTTCAGATGATCTGATACAGCTCCCCCCCCTTTTGTGTTAGATTCAAAGAAATCTACAGTTGCGAATAGAAGAGCAAGGCAGGTACCTCCAGATGATGTTTGAGAAGCAATGCAAATCTGGTGTTGAGCCATTTAAGGCATCATCATCAGCCATTGAAAATCCATCTGGAGTGTCTTCTGACACCATGAAAGACTCTCCTACCAAAAATGAATTGGAAGCATCCAAAATGGACCATTGCAAGTCAGGACCTGATCAAGCTAATGGTAGTACCACGGTTGAGGAAAGCTCGCTGGAAGCAGTTGAGAAGCTGGATACCTCCAAATCTCAACAAGCTTCTAAGGATCTTGAGCAAAATGAAAATGAAGATAGCCCTCAAGCCCCTAAGCGTCAAAGGACAGATGAGTAA
Protein sequence

>MS.gene018653.t1

MEARPAFSIERSSAQQLNNIGMSGALPSSLSVHPTPLEETYPRFSDSQPTYVEKDLKTKTFNHSSHISSSGAVGHMFSSSPGYSNDLHHSSLSPHEKHSRSAHFISQSLSNMASVPLLYSSNNGPVPSTTSTHYSNGNSASWHADPLPSFLDFSANASIDNNQVESGACNIMATEEFSKRNDWQEWADQLISDDDTLTSNWNDLLADNIQDLEPKAVESISKSSSQFSAGHQSQGHQQLPALSGENHVGVAPSSSANSATAKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYRPESSEGVGEKKLSPIEDISSLDLKTGIEITEALRLQMEVQKRLHEQLEIQRNLQLRIEEQGRYLQMMFEKQCKSGVEPFKASSSAIENPSGVSSDTMKDSPTKNELEASKMDHCKSGPDQANGSTTVEESSLEAVEKLDTSKSQQASKDLEQNENEDSPQAPKRQRTDE