AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene018729

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene018729.t1 MTR_1g042700 89.262 149 16 0 125 273 187 335 1.48e-91 280
MS.gene018729.t1 MTR_1g442790 84.828 145 22 0 125 269 182 326 2.86e-84 261
MS.gene018729.t1 MTR_1g442790 84.828 145 22 0 125 269 182 326 5.26e-84 261
MS.gene018729.t1 MTR_1g075880 76.552 145 33 1 125 269 189 332 4.81e-77 243
MS.gene018729.t1 MTR_1g069735 73.103 145 37 2 125 269 192 334 1.17e-71 228
MS.gene018729.t1 MTR_1g069735 73.103 145 37 2 125 269 192 334 1.94e-71 227
MS.gene018729.t1 MTR_1g069735 73.103 145 37 2 125 269 192 334 1.07e-70 228
MS.gene018729.t1 MTR_7g097150 73.793 145 36 2 125 269 192 334 2.65e-70 226
MS.gene018729.t1 MTR_2g040150 61.006 159 49 4 125 273 185 340 3.11e-55 186
MS.gene018729.t1 MTR_3g104700 57.516 153 56 3 125 269 166 317 7.58e-53 179
MS.gene018729.t1 MTR_3g104700 57.516 153 56 3 125 269 166 317 9.28e-53 179
MS.gene018729.t1 MTR_1g019340 58.108 148 56 3 125 269 180 324 1.12e-49 170
MS.gene018729.t1 MTR_1g019340 58.108 148 56 3 125 269 180 324 3.39e-49 170
MS.gene018729.t1 MTR_6g470940 42.759 145 68 4 129 271 953 1084 5.43e-26 107
MS.gene018729.t1 MTR_4g035835 44.138 145 61 5 129 269 835 963 1.39e-25 106
MS.gene018729.t1 MTR_5g069000 43.448 145 62 5 129 269 839 967 2.50e-25 105
MS.gene018729.t1 MTR_1g090917 35.294 136 56 2 130 265 3 106 1.12e-18 85.1
MS.gene018729.t1 MTR_1g090917 35.294 136 56 2 130 265 3 106 1.35e-18 84.7
MS.gene018729.t1 MTR_1g090917 35.294 136 56 2 130 265 128 231 2.42e-18 84.7
MS.gene018729.t1 MTR_1g090917 35.294 136 56 2 130 265 128 231 2.47e-18 84.7
MS.gene018729.t1 MTR_2g049790 32.653 147 57 3 123 269 95 199 1.57e-17 82.4
MS.gene018729.t1 MTR_8g070530 34.532 139 74 2 129 265 675 798 2.14e-16 79.3
MS.gene018729.t1 MTR_2g062850 30.601 183 93 6 125 273 243 425 2.36e-16 79.0
MS.gene018729.t1 MTR_4g107280 29.655 145 59 2 129 273 133 234 2.69e-16 78.2
MS.gene018729.t1 MTR_2g095980 42.222 90 45 2 118 200 693 782 4.59e-16 78.6
MS.gene018729.t1 MTR_4g107280 29.655 145 59 2 129 273 172 273 4.66e-16 77.8
MS.gene018729.t1 MTR_2g095980 42.222 90 45 2 118 200 693 782 5.27e-16 78.2
MS.gene018729.t1 MTR_2g095980 42.222 90 45 2 118 200 438 527 6.16e-16 77.8
MS.gene018729.t1 MTR_2g069990 29.560 159 95 4 123 269 162 315 9.02e-16 77.0
MS.gene018729.t1 MTR_4g131060 31.973 147 57 5 123 269 90 193 9.88e-16 77.0
MS.gene018729.t1 MTR_4g029020 32.624 141 54 3 129 269 88 187 2.27e-15 75.9
MS.gene018729.t1 MTR_7g104180 30.682 176 90 7 129 272 570 745 5.88e-15 75.1
MS.gene018729.t1 MTR_4g061610 33.728 169 75 6 118 273 705 849 1.10e-14 74.3
MS.gene018729.t1 MTR_7g033640 29.843 191 90 7 125 273 306 494 1.28e-14 73.9
MS.gene018729.t1 MTR_1g076370 31.250 144 58 3 126 269 95 197 1.29e-14 73.6
MS.gene018729.t1 MTR_3g010260 30.508 177 85 6 129 269 493 667 1.31e-14 73.9
MS.gene018729.t1 MTR_6g004720 31.111 180 87 7 129 273 329 506 1.41e-14 73.9
MS.gene018729.t1 MTR_4g114670 31.013 158 62 5 119 273 79 192 1.77e-14 73.2
MS.gene018729.t1 MTR_4g114670 31.013 158 62 5 119 273 79 192 2.01e-14 73.2
MS.gene018729.t1 MTR_1g060790 28.814 177 92 6 129 272 548 723 2.62e-14 73.2
MS.gene018729.t1 MTR_5g075100 30.556 144 60 3 126 269 96 199 2.63e-14 72.8
MS.gene018729.t1 MTR_2g016340 31.944 144 57 4 126 269 85 187 3.73e-14 72.4
MS.gene018729.t1 MTR_3g081610 37.615 109 54 2 30 133 107 206 5.86e-14 69.7
MS.gene018729.t1 MTR_8g006870 42.857 84 44 2 125 206 444 525 6.61e-14 72.0
MS.gene018729.t1 MTR_7g072575 31.973 147 57 4 123 269 84 187 7.60e-14 71.2
MS.gene018729.t1 MTR_8g024600 29.801 151 62 3 119 269 2 108 8.02e-14 70.9
MS.gene018729.t1 MTR_5g018050 29.439 214 94 7 73 273 27 196 9.28e-14 69.7
MS.gene018729.t1 MTR_5g088350 28.477 151 66 3 119 269 81 189 9.59e-14 71.2
MS.gene018729.t1 MTR_7g081665 44.000 75 40 1 125 197 438 512 1.02e-13 71.2
MS.gene018729.t1 MTR_7g073520 28.846 156 64 4 120 273 217 327 1.10e-13 70.9
MS.gene018729.t1 MTR_4g065080 28.161 174 91 5 125 265 94 266 1.23e-13 70.9
MS.gene018729.t1 MTR_8g024600 29.801 151 62 3 119 269 85 191 1.34e-13 70.5
MS.gene018729.t1 MTR_2g027240 31.034 145 71 4 125 265 278 397 1.34e-13 70.9
MS.gene018729.t1 MTR_8g024590 29.801 151 62 3 119 269 85 191 1.51e-13 70.5
MS.gene018729.t1 MTR_5g088350 29.801 151 64 4 119 269 81 189 1.55e-13 70.1
MS.gene018729.t1 MTR_1g013700 31.944 144 57 4 126 269 86 188 1.57e-13 70.5
MS.gene018729.t1 MTR_5g088350 29.801 151 64 4 119 269 81 189 2.30e-13 70.1
MS.gene018729.t1 MTR_5g018050 29.439 214 94 7 73 273 27 196 2.48e-13 69.3
MS.gene018729.t1 MTR_1g103760 27.778 144 63 2 126 269 85 187 3.48e-13 69.3
MS.gene018729.t1 MTR_3g466480 29.167 144 61 3 126 269 94 196 4.79e-13 68.9
MS.gene018729.t1 MTR_4g113790 29.032 186 87 5 129 273 174 355 7.37e-13 68.6
MS.gene018729.t1 MTR_5g067150 29.252 147 62 2 123 269 79 183 8.92e-13 67.8
MS.gene018729.t1 MTR_5g067150 29.252 147 62 2 123 269 79 183 1.04e-12 67.8
MS.gene018729.t1 MTR_5g067150 29.252 147 62 2 123 269 79 183 1.07e-12 67.8
MS.gene018729.t1 MTR_8g086380 31.944 144 57 5 126 269 99 201 1.26e-12 67.8
MS.gene018729.t1 MTR_0042s0170 40.196 102 52 1 25 117 194 295 1.27e-12 67.8
MS.gene018729.t1 MTR_3g466400 29.861 144 60 3 126 269 87 189 1.30e-12 67.8
MS.gene018729.t1 MTR_4g006970 30.612 147 59 5 123 269 92 195 1.54e-12 67.4
MS.gene018729.t1 MTR_5g075060 29.861 144 60 3 126 269 85 187 1.93e-12 67.4
MS.gene018729.t1 MTR_6g012990 40.278 72 43 0 126 197 92 163 2.33e-12 67.0
MS.gene018729.t1 MTR_6g012990 40.278 72 43 0 126 197 92 163 2.46e-12 66.6
MS.gene018729.t1 MTR_8g088740 30.464 151 58 4 126 273 73 179 4.22e-12 63.9
MS.gene018729.t1 MTR_7g113490 31.206 141 57 2 129 269 149 249 5.38e-12 66.2
MS.gene018729.t1 MTR_8g062030 35.955 89 57 0 24 112 362 450 7.11e-12 65.9
MS.gene018729.t1 MTR_3g099920 29.286 140 56 2 126 265 92 188 7.99e-12 65.5
MS.gene018729.t1 MTR_6g048250 38.889 72 44 0 126 197 92 163 1.24e-11 65.1
MS.gene018729.t1 MTR_8g446990 27.624 181 93 4 129 273 210 388 1.25e-11 65.1
MS.gene018729.t1 MTR_6g048250 38.889 72 44 0 126 197 92 163 1.25e-11 64.7
MS.gene018729.t1 MTR_4g134870 58.333 60 21 1 24 83 231 286 1.29e-11 64.7
MS.gene018729.t1 MTR_6g048250 38.889 72 44 0 126 197 92 163 1.34e-11 64.3
MS.gene018729.t1 MTR_8g011780 27.647 170 91 6 126 269 103 266 1.76e-11 64.3
MS.gene018729.t1 MTR_2g105010 29.932 147 60 5 123 269 86 189 2.51e-11 63.9
MS.gene018729.t1 MTR_2g085065 34.568 81 48 2 119 197 163 240 2.86e-11 63.5
MS.gene018729.t1 MTR_5g078250 46.970 66 35 0 25 90 362 427 3.31e-11 63.5
MS.gene018729.t1 MTR_4g128820 37.975 79 47 1 119 197 78 154 3.48e-11 63.5
MS.gene018729.t1 MTR_2g020380 28.676 136 60 1 129 264 74 172 3.86e-11 63.9
MS.gene018729.t1 MTR_1g040875 30.556 144 59 3 126 269 98 200 5.01e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene018729.t1 AT4G14350 75.172 145 35 1 125 269 191 334 3.72e-73 234
MS.gene018729.t1 AT4G14350 75.172 145 35 1 125 269 191 334 3.86e-73 234
MS.gene018729.t1 AT4G14350 75.172 145 35 1 125 269 191 334 3.86e-73 234
MS.gene018729.t1 AT4G14350 75.172 145 35 1 125 269 191 334 3.86e-73 234
MS.gene018729.t1 AT3G23310 74.150 147 35 2 125 269 192 337 5.44e-71 228
MS.gene018729.t1 AT2G20470 71.631 141 37 2 129 269 200 337 1.88e-67 218
MS.gene018729.t1 AT2G20470 71.631 141 37 2 129 269 200 337 5.24e-67 218
MS.gene018729.t1 AT2G20470 71.631 141 37 2 129 269 200 337 5.24e-67 218
MS.gene018729.t1 AT1G03920 70.345 145 41 2 125 269 96 238 1.36e-64 209
MS.gene018729.t1 AT1G03920 70.345 145 41 2 125 269 209 351 9.12e-64 209
MS.gene018729.t1 AT1G03920 70.345 145 41 2 125 269 209 351 9.12e-64 209
MS.gene018729.t1 AT4G33080 60.784 153 51 3 125 269 166 317 1.02e-55 187
MS.gene018729.t1 AT4G33080 60.784 153 51 3 125 269 166 317 1.20e-55 187
MS.gene018729.t1 AT1G30640 61.379 145 51 3 129 269 103 246 1.59e-53 180
MS.gene018729.t1 AT2G19400 58.599 157 56 3 125 273 177 332 1.99e-53 181
MS.gene018729.t1 AT1G30640 61.379 145 51 3 129 269 196 339 3.26e-53 181
MS.gene018729.t1 AT1G30640 61.379 145 51 3 129 269 196 339 3.26e-53 181
MS.gene018729.t1 AT5G09890 61.905 147 46 5 129 269 178 320 4.76e-50 172
MS.gene018729.t1 AT5G09890 61.905 147 46 5 129 269 178 320 4.88e-50 172
MS.gene018729.t1 AT1G45160 43.243 148 65 6 129 273 746 877 4.66e-26 107
MS.gene018729.t1 AT1G45160 42.568 148 66 5 129 273 746 877 5.09e-26 107
MS.gene018729.t1 AT3G17850 43.836 146 67 5 129 272 958 1090 5.69e-26 107
MS.gene018729.t1 AT5G62310 41.844 141 71 2 129 269 830 959 1.10e-25 106
MS.gene018729.t1 AT1G48490 41.667 144 67 3 129 272 904 1030 7.75e-25 104
MS.gene018729.t1 AT1G48490 41.667 144 67 3 129 272 904 1030 7.75e-25 104
MS.gene018729.t1 AT1G48490 41.667 144 67 3 129 272 904 1030 7.75e-25 104
MS.gene018729.t1 AT1G48490 41.667 144 67 3 129 272 905 1031 7.83e-25 104
MS.gene018729.t1 AT5G04510 35.294 136 56 2 130 265 121 224 2.70e-19 85.9
MS.gene018729.t1 AT5G04510 35.294 136 56 2 130 265 121 224 9.17e-19 85.5
MS.gene018729.t1 AT5G04510 35.294 136 56 2 130 265 121 224 1.28e-18 85.5
MS.gene018729.t1 AT3G10540 35.294 136 56 2 130 265 122 225 5.28e-18 84.0
MS.gene018729.t1 AT5G55910 32.632 190 85 7 125 273 181 368 9.59e-17 80.1
MS.gene018729.t1 AT5G55910 32.632 190 85 7 125 273 181 368 9.59e-17 80.1
MS.gene018729.t1 AT5G58140 33.117 154 86 3 118 269 642 780 1.15e-16 80.1
MS.gene018729.t1 AT5G58140 33.117 154 86 3 118 269 642 780 1.22e-16 80.1
MS.gene018729.t1 AT5G58140 33.117 154 86 3 118 269 642 780 1.22e-16 80.1
MS.gene018729.t1 AT5G58140 33.117 154 86 3 118 269 642 780 1.22e-16 80.1
MS.gene018729.t1 AT5G58140 33.117 154 86 3 118 269 642 780 1.22e-16 80.1
MS.gene018729.t1 AT5G58140 33.117 154 86 3 118 269 642 780 1.22e-16 80.1
MS.gene018729.t1 AT1G30270 32.639 144 57 3 126 269 7 110 2.84e-16 78.2
MS.gene018729.t1 AT1G30270 32.639 144 57 3 126 269 104 207 4.24e-16 78.2
MS.gene018729.t1 AT3G52890 30.481 187 85 7 129 272 614 798 5.75e-16 78.2
MS.gene018729.t1 AT3G52890 30.481 187 85 7 129 272 614 798 5.75e-16 78.2
MS.gene018729.t1 AT3G52890 30.481 187 85 7 129 272 614 798 5.75e-16 78.2
MS.gene018729.t1 AT3G52890 30.481 187 85 7 129 272 614 798 5.75e-16 78.2
MS.gene018729.t1 AT1G30270 32.639 144 57 3 126 269 104 207 6.04e-16 77.8
MS.gene018729.t1 AT5G25110 32.639 144 56 3 126 269 116 218 8.58e-16 77.4
MS.gene018729.t1 AT4G14580 33.333 141 54 2 129 269 98 198 1.69e-15 76.3
MS.gene018729.t1 AT2G26980 31.788 151 61 4 119 269 82 190 1.78e-15 74.7
MS.gene018729.t1 AT2G26980 30.464 151 63 3 119 269 82 190 1.83e-15 76.3
MS.gene018729.t1 AT2G26980 30.464 151 63 3 119 269 82 190 1.87e-15 75.9
MS.gene018729.t1 AT2G26980 30.464 151 63 3 119 269 92 200 1.91e-15 76.3
MS.gene018729.t1 AT2G26980 30.464 151 63 3 119 269 82 190 2.06e-15 75.9
MS.gene018729.t1 AT3G27580 30.601 183 87 6 129 273 258 438 2.95e-15 75.9
MS.gene018729.t1 AT3G27580 30.601 183 87 6 129 273 258 438 2.95e-15 75.9
MS.gene018729.t1 AT5G10930 31.944 144 57 3 126 269 86 188 3.48e-15 75.5
MS.gene018729.t1 AT4G26610 31.522 184 91 5 125 273 195 378 4.05e-15 75.5
MS.gene018729.t1 AT2G25090 31.250 144 66 2 126 269 89 199 5.73e-15 74.7
MS.gene018729.t1 AT3G45780 42.222 90 45 2 118 200 728 817 5.79e-15 75.1
MS.gene018729.t1 AT3G45780 42.222 90 45 2 118 200 728 817 5.79e-15 75.1
MS.gene018729.t1 AT1G16440 31.034 174 93 6 125 273 187 358 1.17e-14 73.9
MS.gene018729.t1 AT5G47750 44.000 75 40 1 125 197 263 337 1.25e-14 73.9
MS.gene018729.t1 AT5G45820 33.333 144 55 3 126 269 85 187 1.58e-14 73.6
MS.gene018729.t1 AT1G51170 32.317 164 94 5 125 273 100 261 1.77e-14 73.2
MS.gene018729.t1 AT5G35410 33.113 151 56 4 126 273 84 192 1.95e-14 72.8
MS.gene018729.t1 AT4G30960 31.944 144 57 4 126 269 97 199 2.05e-14 73.2
MS.gene018729.t1 AT2G36350 28.877 187 86 7 129 272 635 817 2.42e-14 73.2
MS.gene018729.t1 AT5G35410 33.113 151 56 4 126 273 84 192 3.01e-14 72.8
MS.gene018729.t1 AT4G24400 31.973 147 58 3 123 269 79 183 3.32e-14 72.4
MS.gene018729.t1 AT4G24400 31.973 147 58 3 123 269 79 183 3.33e-14 72.4
MS.gene018729.t1 AT1G01140 29.114 158 67 4 119 273 87 202 5.79e-14 71.6
MS.gene018729.t1 AT1G01140 29.114 158 67 4 119 273 87 202 5.97e-14 71.6
MS.gene018729.t1 AT1G01140 29.114 158 67 4 119 273 87 202 6.11e-14 71.6
MS.gene018729.t1 AT4G13000 31.646 158 88 5 126 269 94 245 6.29e-14 71.2
MS.gene018729.t1 AT5G01810 31.944 144 57 3 126 269 85 187 8.43e-14 71.2
MS.gene018729.t1 AT5G01810 31.944 144 57 3 126 269 85 187 8.43e-14 71.2
MS.gene018729.t1 AT3G23000 32.624 141 54 3 129 269 102 201 1.09e-13 70.9
MS.gene018729.t1 AT5G01810 31.944 144 57 3 126 269 85 187 1.11e-13 70.9
MS.gene018729.t1 AT2G44830 44.000 75 40 1 125 197 435 509 1.26e-13 71.2
MS.gene018729.t1 AT2G44830 44.000 75 40 1 125 197 435 509 1.26e-13 71.2
MS.gene018729.t1 AT2G44830 44.000 75 40 1 125 197 435 509 1.26e-13 71.2
MS.gene018729.t1 AT3G20830 31.928 166 94 5 125 273 99 262 1.60e-13 70.5
MS.gene018729.t1 AT1G79250 30.481 187 90 6 125 273 218 402 1.96e-13 70.5
MS.gene018729.t1 AT1G79250 30.481 187 90 6 125 273 218 402 1.96e-13 70.5
MS.gene018729.t1 AT1G79250 30.481 187 90 6 125 273 218 402 1.96e-13 70.5
MS.gene018729.t1 AT1G79250 30.481 187 90 6 125 273 218 402 1.96e-13 70.5
MS.gene018729.t1 AT2G30360 27.778 144 64 2 126 269 95 198 2.30e-13 70.1
MS.gene018729.t1 AT5G58380 31.250 144 58 2 126 269 85 187 2.36e-13 70.1
MS.gene018729.t1 AT2G26700 42.254 71 39 1 129 197 165 235 2.54e-13 70.1
MS.gene018729.t1 AT4G18700 31.293 147 60 4 126 272 99 204 2.63e-13 70.1
MS.gene018729.t1 AT5G45810 31.250 144 58 4 126 269 101 203 3.11e-13 69.7
MS.gene018729.t1 AT3G08730 27.564 156 66 4 120 273 203 313 4.01e-13 69.3
MS.gene018729.t1 AT3G08730 27.564 156 66 4 120 273 203 313 4.01e-13 69.3
MS.gene018729.t1 AT3G08720 27.564 156 66 4 120 273 209 319 4.82e-13 68.9
MS.gene018729.t1 AT3G08720 27.564 156 66 4 120 273 209 319 4.82e-13 68.9
MS.gene018729.t1 AT3G08720 27.564 156 66 4 120 273 209 319 4.82e-13 68.9
MS.gene018729.t1 AT3G08720 27.564 156 66 4 120 273 209 319 4.82e-13 68.9
MS.gene018729.t1 AT3G12690 29.379 177 95 6 125 273 257 431 4.96e-13 69.3
MS.gene018729.t1 AT3G12690 29.379 177 95 6 125 273 257 431 4.96e-13 69.3
MS.gene018729.t1 AT3G12690 29.379 177 95 6 125 273 257 431 4.96e-13 69.3
MS.gene018729.t1 AT5G18700 43.243 74 42 0 129 202 74 147 9.94e-13 68.6
MS.gene018729.t1 AT1G29230 30.612 147 61 4 126 272 147 252 1.54e-12 67.8
MS.gene018729.t1 AT1G54960 29.787 141 59 2 129 269 149 249 1.58e-12 67.8
MS.gene018729.t1 AT1G54960 29.787 141 59 2 129 269 149 249 1.58e-12 67.8
MS.gene018729.t1 AT3G29160 39.130 69 42 0 129 197 96 164 2.47e-12 66.6
MS.gene018729.t1 AT3G44610 26.486 185 100 5 125 273 151 335 2.54e-12 67.0
MS.gene018729.t1 AT3G29160 39.130 69 42 0 129 197 96 164 2.90e-12 67.0
MS.gene018729.t1 AT3G29160 39.130 69 42 0 129 197 96 164 2.90e-12 67.0
MS.gene018729.t1 AT3G01090 40.278 72 43 0 126 197 92 163 3.33e-12 66.6
MS.gene018729.t1 AT3G01090 40.278 72 43 0 126 197 92 163 3.33e-12 66.6
MS.gene018729.t1 AT3G01090 40.278 72 43 0 126 197 115 186 3.60e-12 66.6
MS.gene018729.t1 AT1G09000 30.496 141 58 2 129 269 150 250 4.63e-12 66.2
MS.gene018729.t1 AT1G09000 30.496 141 58 2 129 269 150 250 5.22e-12 66.2
MS.gene018729.t1 AT2G34650 30.872 149 88 4 129 264 156 302 8.36e-12 65.5
MS.gene018729.t1 AT2G45490 44.595 74 39 1 123 196 94 165 8.75e-12 64.3
MS.gene018729.t1 AT5G03640 27.660 188 85 6 129 272 617 797 9.29e-12 65.5
MS.gene018729.t1 AT5G03640 27.660 188 85 6 129 272 617 797 9.29e-12 65.5
MS.gene018729.t1 AT2G45490 44.595 74 39 1 123 196 94 165 1.11e-11 64.3
MS.gene018729.t1 AT5G21326 27.815 151 67 3 119 269 81 189 1.28e-11 64.7
MS.gene018729.t1 AT3G14370 27.778 144 97 2 129 265 164 307 2.72e-11 63.9
MS.gene018729.t1 AT5G39440 37.681 69 43 0 129 197 95 163 3.99e-11 63.5
MS.gene018729.t1 AT3G25250 29.487 156 90 4 126 265 97 248 4.66e-11 63.2
MS.gene018729.t1 AT1G53700 25.490 153 101 3 129 272 170 318 6.99e-11 62.8

Find 49 sgRNAs with CRISPR-Local

Find 246 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACGTGAAATTATCAGATTT+TGG 0.253070 7.1:+11144108 MS.gene018729:CDS
AGGTTCTTCTGCATTGAATA+AGG 0.301814 7.1:+11141486 MS.gene018729:CDS
CCAGTTGCTGCTGTTGTGAT+TGG 0.310492 7.1:-11144236 None:intergenic
ATGTTTATGAATAGACTCTA+TGG 0.331837 7.1:-11143798 None:intergenic
CAAGCCCGACAACTTGCTTC+TGG 0.332235 7.1:+11144074 MS.gene018729:CDS
AGTATTTATATCTCATATAA+TGG 0.365878 7.1:+11143679 MS.gene018729:CDS
AACTTCTGGAGCAATATAAT+CGG 0.385695 7.1:-11144711 None:intergenic
GCTAGACTGCAGTAACCTTC+AGG 0.390289 7.1:+11144143 MS.gene018729:CDS
ATTCATCCAATGCAGTTTCC+AGG 0.407369 7.1:+11141279 MS.gene018729:CDS
ATAAACATAATTATATTCAT+AGG 0.410728 7.1:+11143813 MS.gene018729:CDS
CCTCTCTTCAGAATAACTTC+TGG 0.412241 7.1:-11144725 None:intergenic
AAGCAAGTTCATCACTTTGA+AGG 0.415965 7.1:-11144203 None:intergenic
TAAAATTATTGAAGTGTTTG+AGG 0.418722 7.1:+11141343 MS.gene018729:CDS
ATTATTGAAGTGTTTGAGGA+TGG 0.427449 7.1:+11141347 MS.gene018729:CDS
CCAATCACAACAGCAGCAAC+TGG 0.428613 7.1:+11144236 MS.gene018729:CDS
AGCAGCAACTGGAGCATTTG+CGG 0.457627 7.1:+11144247 MS.gene018729:CDS
GTGGTTCTGATTTCAGTGCT+TGG 0.463729 7.1:+11140654 MS.gene018729:CDS
CTGATGGATCTTATCGTGTT+GGG 0.468679 7.1:+11141303 MS.gene018729:CDS
CTATCCAGAAGCAAGTTGTC+GGG 0.469273 7.1:-11144078 None:intergenic
AAGGATGATAATGCTGCTGC+TGG 0.474407 7.1:+11141505 MS.gene018729:CDS
GGGTGTTCCAACCGTAGAAT+AGG 0.479245 7.1:-11144690 None:intergenic
TCTAATGGAGTTAACATAAG+TGG 0.486303 7.1:+11144177 MS.gene018729:CDS
GATATTGCAGGCCTATTCTA+CGG 0.491719 7.1:+11144679 MS.gene018729:intron
TGCTGCTGTTGTGATTGGTT+AGG 0.492962 7.1:-11144231 None:intergenic
TATTGAAGTGTTTGAGGATG+GGG 0.498582 7.1:+11141349 MS.gene018729:CDS
TCGTGTTGGGAGGGTCTGTA+TGG 0.505411 7.1:+11141316 MS.gene018729:CDS
TCTATCCAGAAGCAAGTTGT+CGG 0.513902 7.1:-11144079 None:intergenic
TTATTGAAGTGTTTGAGGAT+GGG 0.515166 7.1:+11141348 MS.gene018729:CDS
AATGCAGTTTCCAGGTCTGA+TGG 0.517090 7.1:+11141287 MS.gene018729:CDS
TCTGATGGATCTTATCGTGT+TGG 0.517954 7.1:+11141302 MS.gene018729:CDS
ATCAGACCTGGAAACTGCAT+TGG 0.519949 7.1:-11141285 None:intergenic
TTGCAGGCCTATTCTACGGT+TGG 0.530006 7.1:+11144683 MS.gene018729:intron
CAACGTCATCATATCTCCAC+CGG 0.544529 7.1:-11143711 None:intergenic
ACTTCTGGAGCAATATAATC+GGG 0.545377 7.1:-11144710 None:intergenic
AACTTGCTTCTGGATAGAAA+TGG 0.545939 7.1:+11144084 MS.gene018729:CDS
CATATAATGGAGTATCTACC+CGG 0.572784 7.1:+11143692 MS.gene018729:CDS
ATGGATCTTATCGTGTTGGG+AGG 0.582289 7.1:+11141306 MS.gene018729:CDS
CCAGAAGTTATTCTGAAGAG+AGG 0.595321 7.1:+11144725 MS.gene018729:CDS
CAGAAGTTATTCTGAAGAGA+GGG 0.602815 7.1:+11144726 MS.gene018729:CDS
AATGTGCAGGGTGAAAATGC+TGG 0.609505 7.1:+11141197 MS.gene018729:intron
ACGATAAGATCCATCAGACC+TGG 0.615025 7.1:-11141297 None:intergenic
TGGATCTTATCGTGTTGGGA+GGG 0.627901 7.1:+11141307 MS.gene018729:CDS
TGAAGGTTACTGCAGTCTAG+CGG 0.630065 7.1:-11144141 None:intergenic
ATATGATGACGTTGTTGATG+CGG 0.636502 7.1:+11143720 MS.gene018729:CDS
GAAACTTGTGGCTGATGCGA+AGG 0.640410 7.1:+11141077 MS.gene018729:CDS
TGAAGCTAAGTTCTATATCG+AGG 0.653871 7.1:+11143763 MS.gene018729:CDS
AACGTCATCATATCTCCACC+GGG 0.670602 7.1:-11143710 None:intergenic
GAAGTCTTGTGCGAAACTTG+TGG 0.675151 7.1:+11141065 MS.gene018729:CDS
ATAATGGAGTATCTACCCGG+TGG 0.735358 7.1:+11143695 MS.gene018729:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATATTAGTAAAATTCAT+TGG + chr7.1:11142836-11142855 MS.gene018729:intron 10.0%
!! ATAAACATAATTATATTCAT+AGG + chr7.1:11143813-11143832 MS.gene018729:CDS 10.0%
!! TTTAAATTTAAAAGAAAAAC+AGG - chr7.1:11142265-11142284 None:intergenic 10.0%
!!! TAGTTTTATTAAAAAATAGA+AGG + chr7.1:11140928-11140947 MS.gene018729:intron 10.0%
!!! TCTATTTTTTAATAAAACTA+CGG - chr7.1:11140928-11140947 None:intergenic 10.0%
!!! TTTTTATTATAACTGAAAAA+AGG - chr7.1:11144447-11144466 None:intergenic 10.0%
!! AAACATCACTAAAAATATAA+AGG - chr7.1:11140833-11140852 None:intergenic 15.0%
!! AGTATTTATATCTCATATAA+TGG + chr7.1:11143679-11143698 MS.gene018729:CDS 15.0%
!! ATTTACATCATATATCAATT+TGG + chr7.1:11144550-11144569 MS.gene018729:intron 15.0%
!! GTAATTTGATGAAATATTTA+TGG + chr7.1:11142645-11142664 MS.gene018729:intron 15.0%
!! TAGCAAACTTTATTATAAAA+CGG + chr7.1:11144347-11144366 MS.gene018729:intron 15.0%
!! TTTACATCATATATCAATTT+GGG + chr7.1:11144551-11144570 MS.gene018729:intron 15.0%
!!! AAAGATGTTTTAAAGAAAAT+TGG + chr7.1:11140632-11140651 MS.gene018729:CDS 15.0%
!!! AATAAAATTAAAGTACCATA+GGG - chr7.1:11142514-11142533 None:intergenic 15.0%
!!! ATTATTTTCTTTTACTTATC+AGG + chr7.1:11143547-11143566 MS.gene018729:intron 15.0%
!!! TAATAAAATTAAAGTACCAT+AGG - chr7.1:11142515-11142534 None:intergenic 15.0%
!!! TATTTTATTATTAGTAGTTG+TGG + chr7.1:11140859-11140878 MS.gene018729:intron 15.0%
!!! TCTTTTGTTATATTTTTGTT+TGG + chr7.1:11144504-11144523 MS.gene018729:intron 15.0%
!! AAATTTAAAAGAAAAACAGG+CGG - chr7.1:11142262-11142281 None:intergenic 20.0%
!!! AGTTATTGAACTTATTTTCT+TGG + chr7.1:11143303-11143322 MS.gene018729:intron 20.0%
!!! GAATTGAATAATTTTTGTCA+GGG + chr7.1:11141975-11141994 MS.gene018729:intron 20.0%
!!! GTTAATTTATTTTGACCATT+TGG + chr7.1:11142981-11143000 MS.gene018729:intron 20.0%
!!! TAAAATTATTGAAGTGTTTG+AGG + chr7.1:11141343-11141362 MS.gene018729:CDS 20.0%
!!! TATATATTTGAGTTTGATCA+AGG - chr7.1:11142887-11142906 None:intergenic 20.0%
!!! TGAATTGAATAATTTTTGTC+AGG + chr7.1:11141974-11141993 MS.gene018729:intron 20.0%
! AAAGAGAGAATAGTCTTTAA+AGG - chr7.1:11144596-11144615 None:intergenic 25.0%
! AATAGTGATTACAGATTAAG+CGG - chr7.1:11143840-11143859 None:intergenic 25.0%
! AATATAAAGGTCGATACAAA+AGG - chr7.1:11140820-11140839 None:intergenic 25.0%
! AATGAGTTAGAAAAAGGTTA+TGG - chr7.1:11143132-11143151 None:intergenic 25.0%
! AGTAATTGTAAAGTTCAACA+TGG - chr7.1:11142591-11142610 None:intergenic 25.0%
! AGTGATTTCGTTGAAAATAA+CGG - chr7.1:11143917-11143936 None:intergenic 25.0%
! ATATTCATAAGCTATACTTG+AGG - chr7.1:11143165-11143184 None:intergenic 25.0%
! ATGTTTATGAATAGACTCTA+TGG - chr7.1:11143801-11143820 None:intergenic 25.0%
! ATTGCGAAAGAGTTAAATAA+TGG + chr7.1:11143420-11143439 MS.gene018729:intron 25.0%
! CATTATTCTTTCGTTATGTT+TGG + chr7.1:11144473-11144492 MS.gene018729:intron 25.0%
! GAACTTTACAATTACTATCT+AGG + chr7.1:11142595-11142614 MS.gene018729:intron 25.0%
! GCTACAATCTTATACTAAAT+AGG - chr7.1:11143875-11143894 None:intergenic 25.0%
! GTCATATACAATTTCTGATT+AGG + chr7.1:11142777-11142796 MS.gene018729:intron 25.0%
! GTGATTGGTATAATAGTATA+TGG + chr7.1:11144762-11144781 MS.gene018729:intron 25.0%
! TAGGAAAATGAGTTAGAAAA+AGG - chr7.1:11143138-11143157 None:intergenic 25.0%
! TAGGTAGACATTAGAAAAAA+TGG + chr7.1:11142796-11142815 MS.gene018729:intron 25.0%
! TATGATTACTTTGTTCAAAG+CGG + chr7.1:11144415-11144434 MS.gene018729:intron 25.0%
! TTGAATATGTCAAATCTGAA+AGG + chr7.1:11143592-11143611 MS.gene018729:intron 25.0%
! TTGATGAAATATTTATGGCA+TGG + chr7.1:11142650-11142669 MS.gene018729:intron 25.0%
!! AATTTTCAGTGTTAGATTGT+AGG + chr7.1:11143947-11143966 MS.gene018729:intron 25.0%
!! ATTTTCAGTGTTAGATTGTA+GGG + chr7.1:11143948-11143967 MS.gene018729:intron 25.0%
!! CAGCATGTTATATATGTTTT+TGG - chr7.1:11142678-11142697 None:intergenic 25.0%
!! GGTTTAAAACTGTCATATAT+AGG + chr7.1:11141677-11141696 MS.gene018729:intron 25.0%
!! TTATAACTGAAAAAAGGTGT+AGG - chr7.1:11144441-11144460 None:intergenic 25.0%
!!! AATTTTTCAAATGTCAAGGT+TGG + chr7.1:11141377-11141396 MS.gene018729:intron 25.0%
!!! ATTTCTCATTTTTGTTTTCC+AGG + chr7.1:11141453-11141472 MS.gene018729:intron 25.0%
!!! CATGACATAATTGTGTTTTT+TGG + chr7.1:11141656-11141675 MS.gene018729:intron 25.0%
!!! GATGTTTTAAAGAAAATTGG+TGG + chr7.1:11140635-11140654 MS.gene018729:CDS 25.0%
!!! GTGCTTTTATGTTTTTGATT+AGG + chr7.1:11143569-11143588 MS.gene018729:intron 25.0%
!!! TATTGAACTTATTTTCTTGG+TGG + chr7.1:11143306-11143325 MS.gene018729:intron 25.0%
!!! TGCAAATTTTTCAAATGTCA+AGG + chr7.1:11141373-11141392 MS.gene018729:CDS 25.0%
!!! TTTATTTTGACCATTTGGTA+AGG + chr7.1:11142986-11143005 MS.gene018729:intron 25.0%
!!! TTTCTCATTTTTGTTTTCCA+GGG + chr7.1:11141454-11141473 MS.gene018729:intron 25.0%
AAAAGGAAATTGACTAAGGT+TGG + chr7.1:11141631-11141650 MS.gene018729:intron 30.0%
AAATTACCCTATAAGAGTCA+AGG - chr7.1:11142632-11142651 None:intergenic 30.0%
AAGAAGCAAAACTAATTGAG+TGG - chr7.1:11142547-11142566 None:intergenic 30.0%
AATTATAGAGACAGAACGAA+AGG - chr7.1:11142099-11142118 None:intergenic 30.0%
AGAAGCAAAACTAATTGAGT+GGG - chr7.1:11142546-11142565 None:intergenic 30.0%
AGATATGTTGGAAACAGTTT+GGG + chr7.1:11142918-11142937 MS.gene018729:intron 30.0%
ATTATAGAGACAGAACGAAA+GGG - chr7.1:11142098-11142117 None:intergenic 30.0%
ATTCAATGTGATTGCAGAAA+GGG + chr7.1:11141894-11141913 MS.gene018729:intron 30.0%
CAGGAAAAAGACTTATCTAA+TGG + chr7.1:11144162-11144181 MS.gene018729:CDS 30.0%
CCTATATTTGATACTGTTGA+AGG + chr7.1:11142163-11142182 MS.gene018729:intron 30.0%
CCTTCAACAGTATCAAATAT+AGG - chr7.1:11142166-11142185 None:intergenic 30.0%
CTTGATTACACTACTTTACT+TGG - chr7.1:11141128-11141147 None:intergenic 30.0%
CTTTATTGTTCCTTTCAAGA+TGG + chr7.1:11143654-11143673 MS.gene018729:intron 30.0%
TATTTAAGTAAGCCAAGTAG+TGG + chr7.1:11140888-11140907 MS.gene018729:intron 30.0%
TCATACAATGTGCATTGAAT+AGG - chr7.1:11143334-11143353 None:intergenic 30.0%
TCTAATGGAGTTAACATAAG+TGG + chr7.1:11144177-11144196 MS.gene018729:CDS 30.0%
TTAACGATTTCAAATGTGCA+GGG + chr7.1:11141185-11141204 MS.gene018729:intron 30.0%
TTAGCAATATGCAGATGATT+CGG + chr7.1:11142389-11142408 MS.gene018729:intron 30.0%
TTCTATCTTTGTGATATTGC+AGG + chr7.1:11144667-11144686 MS.gene018729:intron 30.0%
TTTAACGATTTCAAATGTGC+AGG + chr7.1:11141184-11141203 MS.gene018729:intron 30.0%
TTTCAATCTCCCATTATCTT+GGG - chr7.1:11140719-11140738 None:intergenic 30.0%
! AAACAGACTATTCTTTTGCA+TGG - chr7.1:11143282-11143301 None:intergenic 30.0%
! ATTATTGAAGTGTTTGAGGA+TGG + chr7.1:11141347-11141366 MS.gene018729:CDS 30.0%
! CAACGAAATCACTATTGTTT+TGG + chr7.1:11143924-11143943 MS.gene018729:intron 30.0%
! CACGTGAAATTATCAGATTT+TGG + chr7.1:11144108-11144127 MS.gene018729:CDS 30.0%
! GCTCAATTTTTCTGTTCAAA+GGG + chr7.1:11141851-11141870 MS.gene018729:intron 30.0%
! TAGATAAGTCTTTTTCCTGA+AGG - chr7.1:11144161-11144180 None:intergenic 30.0%
! TGCTCAATTTTTCTGTTCAA+AGG + chr7.1:11141850-11141869 MS.gene018729:intron 30.0%
! TTATTGAAGTGTTTGAGGAT+GGG + chr7.1:11141348-11141367 MS.gene018729:CDS 30.0%
!! AACTTCTGGAGCAATATAAT+CGG - chr7.1:11144714-11144733 None:intergenic 30.0%
!!! TGGAGAAATTTTTTTCCCTA+TGG + chr7.1:11142496-11142515 MS.gene018729:intron 30.0%
AAAAGATGAAGTCCACTACT+TGG - chr7.1:11140903-11140922 None:intergenic 35.0%
AAATCAGAGATGCTTTGTAG+AGG + chr7.1:11143487-11143506 MS.gene018729:intron 35.0%
AACCCTTGACAAAATCATGA+GGG - chr7.1:11141570-11141589 None:intergenic 35.0%
AAGCAAGTTCATCACTTTGA+AGG - chr7.1:11144206-11144225 None:intergenic 35.0%
AATGAATACCTCCGAATGAT+CGG - chr7.1:11144004-11144023 None:intergenic 35.0%
AATGGGAGATTGAAAGTTTC+AGG + chr7.1:11140724-11140743 MS.gene018729:intron 35.0%
ACAATTTCAGAGAGATAGTG+TGG - chr7.1:11142072-11142091 None:intergenic 35.0%
ACATGAACCTTGACTCTTAT+AGG + chr7.1:11142622-11142641 MS.gene018729:intron 35.0%
ACTGTTTCCAACATATCTGT+CGG - chr7.1:11142916-11142935 None:intergenic 35.0%
AGAAAATCCGACAGATATGT+TGG + chr7.1:11142906-11142925 MS.gene018729:intron 35.0%
AGGTGTGAGAAAAAGACTTT+GGG + chr7.1:11141697-11141716 MS.gene018729:intron 35.0%
AGGTTCTTCTGCATTGAATA+AGG + chr7.1:11141486-11141505 MS.gene018729:CDS 35.0%
ATCAGAGACACAACAAGAAA+AGG + chr7.1:11141737-11141756 MS.gene018729:intron 35.0%
ATCCAAATAAGAGGAGGAAA+AGG - chr7.1:11142353-11142372 None:intergenic 35.0%
ATGGGAGATTGAAAGTTTCA+GGG + chr7.1:11140725-11140744 MS.gene018729:intron 35.0%
CAGATATGTTGGAAACAGTT+TGG + chr7.1:11142917-11142936 MS.gene018729:intron 35.0%
CATCTGCATATTGCTAAAAC+AGG - chr7.1:11142386-11142405 None:intergenic 35.0%
CATGAACCTTGACTCTTATA+GGG + chr7.1:11142623-11142642 MS.gene018729:intron 35.0%
CTGGATCAAATCTAACAATC+TGG + chr7.1:11142217-11142236 MS.gene018729:intron 35.0%
CTTTCAATCTCCCATTATCT+TGG - chr7.1:11140720-11140739 None:intergenic 35.0%
CTTTCGTTATGTTTGGACTT+CGG + chr7.1:11144480-11144499 MS.gene018729:intron 35.0%
GAAGAAGTGAATAACTTCTC+AGG + chr7.1:11144816-11144835 MS.gene018729:intron 35.0%
GATATGTTGGAAACAGTTTG+GGG + chr7.1:11142919-11142938 MS.gene018729:intron 35.0%
GATCTTGAATACCGATCATT+CGG + chr7.1:11143990-11144009 MS.gene018729:intron 35.0%
GATTCAATGTGATTGCAGAA+AGG + chr7.1:11141893-11141912 MS.gene018729:intron 35.0%
GGAGATGAAAAACTTTGATG+TGG + chr7.1:11142755-11142774 MS.gene018729:intron 35.0%
GGTTATATGTTGGGCTTATT+TGG + chr7.1:11143024-11143043 MS.gene018729:intron 35.0%
TAAATACTCGCCATCTTGAA+AGG - chr7.1:11143667-11143686 None:intergenic 35.0%
TAGGTGTGAGAAAAAGACTT+TGG + chr7.1:11141696-11141715 MS.gene018729:intron 35.0%
TATGTTGGGCTTATTTGGAT+TGG + chr7.1:11143029-11143048 MS.gene018729:intron 35.0%
TCCTGATTGCAAAGAGATAT+GGG + chr7.1:11142734-11142753 MS.gene018729:intron 35.0%
TCTGAGCTGAAAAATCTCAT+TGG + chr7.1:11141230-11141249 MS.gene018729:CDS 35.0%
TGAAGCTAAGTTCTATATCG+AGG + chr7.1:11143763-11143782 MS.gene018729:CDS 35.0%
TGGCAAAAGGAAATTGACTA+AGG + chr7.1:11141627-11141646 MS.gene018729:intron 35.0%
TTCAATCTCCCATTATCTTG+GGG - chr7.1:11140718-11140737 None:intergenic 35.0%
! AACTTGCTTCTGGATAGAAA+TGG + chr7.1:11144084-11144103 MS.gene018729:CDS 35.0%
! ATATGATGACGTTGTTGATG+CGG + chr7.1:11143720-11143739 MS.gene018729:CDS 35.0%
! ATCTAGCTGCATTTTCAATG+AGG + chr7.1:11141816-11141835 MS.gene018729:intron 35.0%
! CAGAAGTTATTCTGAAGAGA+GGG + chr7.1:11144726-11144745 MS.gene018729:CDS 35.0%
! CATATAATGGAGTATCTACC+CGG + chr7.1:11143692-11143711 MS.gene018729:CDS 35.0%
! TATTGAAGTGTTTGAGGATG+GGG + chr7.1:11141349-11141368 MS.gene018729:CDS 35.0%
! TGAATTTTGAATGCAAGTGC+AGG - chr7.1:11141926-11141945 None:intergenic 35.0%
! TTCCTTTTCCTCCTCTTATT+TGG + chr7.1:11142348-11142367 MS.gene018729:intron 35.0%
! TTTTCTGTTCAAAGGGTCAA+AGG + chr7.1:11141858-11141877 MS.gene018729:intron 35.0%
! TTTTGACCATTTGGTAAGGA+TGG + chr7.1:11142990-11143009 MS.gene018729:intron 35.0%
!! ACTTCTGGAGCAATATAATC+GGG - chr7.1:11144713-11144732 None:intergenic 35.0%
!! ATGAGATTTTTCAGCTCAGA+TGG - chr7.1:11141230-11141249 None:intergenic 35.0%
!! CAAGAAAAGGAAGAAGTGTT+TGG + chr7.1:11141750-11141769 MS.gene018729:intron 35.0%
!! GAAAGAAATGTGTTTTTGCC+TGG + chr7.1:11142858-11142877 MS.gene018729:intron 35.0%
!! TCTTTTGACTCACTCTCAAA+TGG + chr7.1:11140781-11140800 MS.gene018729:intron 35.0%
!! TTCTGTTTTGTTGCCTAAGA+TGG + chr7.1:11141588-11141607 MS.gene018729:intron 35.0%
!!! TTTTGTTTTCCAGGGAAATG+TGG + chr7.1:11141462-11141481 MS.gene018729:intron 35.0%
AAGCTATACTTGAGGAGCTT+AGG - chr7.1:11143157-11143176 None:intergenic 40.0%
AATTTCTCCACAACCAACAC+TGG - chr7.1:11142486-11142505 None:intergenic 40.0%
AGAAGTCTTCAGAGAATAGG+TGG + chr7.1:11140753-11140772 MS.gene018729:intron 40.0%
AGAGATTGACCCCAAGATAA+TGG + chr7.1:11140706-11140725 MS.gene018729:intron 40.0%
AGGAGAATGGGGTTATATGT+TGG + chr7.1:11143014-11143033 MS.gene018729:intron 40.0%
AGTAAGGTGAAATGTTGTCC+GGG + chr7.1:11141533-11141552 MS.gene018729:intron 40.0%
ATACGGGGAGATGCATAAAT+CGG + chr7.1:11142438-11142457 MS.gene018729:intron 40.0%
ATGTAATTCGTCGCGATGAT+TGG + chr7.1:11142028-11142047 MS.gene018729:intron 40.0%
ATTCATCCAATGCAGTTTCC+AGG + chr7.1:11141279-11141298 MS.gene018729:CDS 40.0%
ATTTATGCATCTCCCCGTAT+CGG - chr7.1:11142438-11142457 None:intergenic 40.0%
CAGTAAGGTGAAATGTTGTC+CGG + chr7.1:11141532-11141551 MS.gene018729:intron 40.0%
CCTCTCTTCAGAATAACTTC+TGG - chr7.1:11144728-11144747 None:intergenic 40.0%
CTGCATATTGCTAAAACAGG+CGG - chr7.1:11142383-11142402 None:intergenic 40.0%
GAAACCACTATGAGCAGTTA+AGG - chr7.1:11142314-11142333 None:intergenic 40.0%
GAACCCTTGACAAAATCATG+AGG - chr7.1:11141571-11141590 None:intergenic 40.0%
GAAGTCTTCAGAGAATAGGT+GGG + chr7.1:11140754-11140773 MS.gene018729:intron 40.0%
GAGATTGACCCCAAGATAAT+GGG + chr7.1:11140707-11140726 MS.gene018729:intron 40.0%
GATATTGCAGGCCTATTCTA+CGG + chr7.1:11144679-11144698 MS.gene018729:intron 40.0%
GGAAGAAGTCTTCAGAGAAT+AGG + chr7.1:11140750-11140769 MS.gene018729:intron 40.0%
GGAGAATGGGGTTATATGTT+GGG + chr7.1:11143015-11143034 MS.gene018729:intron 40.0%
GGGTACTTAACTTTACGACA+TGG + chr7.1:11143968-11143987 MS.gene018729:intron 40.0%
GGTGTGAGAAAAAGACTTTG+GGG + chr7.1:11141698-11141717 MS.gene018729:intron 40.0%
GGTTCAGCAATCCAAATAAG+AGG - chr7.1:11142362-11142381 None:intergenic 40.0%
GTCCTGATTGCAAAGAGATA+TGG + chr7.1:11142733-11142752 MS.gene018729:intron 40.0%
GTGAGTATGTACCTGCATAT+CGG + chr7.1:11140681-11140700 MS.gene018729:intron 40.0%
TAGTCATAAGCCTTCCGATA+CGG + chr7.1:11142421-11142440 MS.gene018729:intron 40.0%
TCAATCTCTAACCGATATGC+AGG - chr7.1:11140695-11140714 None:intergenic 40.0%
TCAGCAATCCAAATAAGAGG+AGG - chr7.1:11142359-11142378 None:intergenic 40.0%
TCCCATATCTCTTTGCAATC+AGG - chr7.1:11142738-11142757 None:intergenic 40.0%
TCTATCCAGAAGCAAGTTGT+CGG - chr7.1:11144082-11144101 None:intergenic 40.0%
TCTTTCGCAATGTGAAACTC+CGG - chr7.1:11143411-11143430 None:intergenic 40.0%
TGCTATCAACTTCTGCAAGA+AGG - chr7.1:11143620-11143639 None:intergenic 40.0%
! AGATGACTTTCTTTTCCCTC+CGG + chr7.1:11143389-11143408 MS.gene018729:intron 40.0%
! AGTATATGGCGTTGAAAGCT+TGG + chr7.1:11144776-11144795 MS.gene018729:intron 40.0%
! CCAGAAGTTATTCTGAAGAG+AGG + chr7.1:11144725-11144744 MS.gene018729:CDS 40.0%
! CTGATGGATCTTATCGTGTT+GGG + chr7.1:11141303-11141322 MS.gene018729:CDS 40.0%
! GACCCTCATGATTTTGTCAA+GGG + chr7.1:11141565-11141584 MS.gene018729:intron 40.0%
! GGTTATATACGCCAGTTTTG+TGG + chr7.1:11142184-11142203 MS.gene018729:intron 40.0%
! GTTATTCTGAAGAGAGGGTA+TGG + chr7.1:11144731-11144750 MS.gene018729:intron 40.0%
! TCTGATGGATCTTATCGTGT+TGG + chr7.1:11141302-11141321 MS.gene018729:CDS 40.0%
! TGACCCTCATGATTTTGTCA+AGG + chr7.1:11141564-11141583 MS.gene018729:intron 40.0%
!! AAAGGAAGAAGTGTTTGGCT+TGG + chr7.1:11141755-11141774 MS.gene018729:intron 40.0%
AAATCGGAAGGCAGTACATG+TGG + chr7.1:11142454-11142473 MS.gene018729:intron 45.0%
AAATCTGCAGGCACCATCTT+AGG - chr7.1:11141604-11141623 None:intergenic 45.0%
AACAGTTTGGGGATAACTGC+AGG + chr7.1:11142930-11142949 MS.gene018729:intron 45.0%
AACGTCATCATATCTCCACC+GGG - chr7.1:11143713-11143732 None:intergenic 45.0%
AAGAACCTTCCACATTTCCC+TGG - chr7.1:11141474-11141493 None:intergenic 45.0%
AATGCAGTTTCCAGGTCTGA+TGG + chr7.1:11141287-11141306 MS.gene018729:CDS 45.0%
AATGTGCAGGGTGAAAATGC+TGG + chr7.1:11141197-11141216 MS.gene018729:intron 45.0%
ACAGTTTGGGGATAACTGCA+GGG + chr7.1:11142931-11142950 MS.gene018729:intron 45.0%
ACGATAAGATCCATCAGACC+TGG - chr7.1:11141300-11141319 None:intergenic 45.0%
AGAGATGCTTTGTAGAGGAC+AGG + chr7.1:11143492-11143511 MS.gene018729:intron 45.0%
AGTCATAAGCCTTCCGATAC+GGG + chr7.1:11142422-11142441 MS.gene018729:intron 45.0%
ATCAGACCTGGAAACTGCAT+TGG - chr7.1:11141288-11141307 None:intergenic 45.0%
ATGGATCTTATCGTGTTGGG+AGG + chr7.1:11141306-11141325 MS.gene018729:CDS 45.0%
CAACGTCATCATATCTCCAC+CGG - chr7.1:11143714-11143733 None:intergenic 45.0%
CAGTCCTTAACTGCTCATAG+TGG + chr7.1:11142307-11142326 MS.gene018729:intron 45.0%
CTATCCAGAAGCAAGTTGTC+GGG - chr7.1:11144081-11144100 None:intergenic 45.0%
CTCCTTCCATCCTTACCAAA+TGG - chr7.1:11142999-11143018 None:intergenic 45.0%
CTTGAATACCGATCATTCGG+AGG + chr7.1:11143993-11144012 MS.gene018729:intron 45.0%
GAAAAATCGCAGCAGAATGC+TGG + chr7.1:11144269-11144288 MS.gene018729:CDS 45.0%
GACCATTTGGTAAGGATGGA+AGG + chr7.1:11142994-11143013 MS.gene018729:intron 45.0%
GAGATTGAAAGTTTCAGGGC+TGG + chr7.1:11140729-11140748 MS.gene018729:intron 45.0%
GCAGTAGCAAACCACAAAAC+TGG - chr7.1:11142198-11142217 None:intergenic 45.0%
GCTTTGTAGAGGACAGGTAT+TGG + chr7.1:11143498-11143517 MS.gene018729:intron 45.0%
GGTAAGGATGGAAGGAGAAT+GGG + chr7.1:11143002-11143021 MS.gene018729:intron 45.0%
GTAAGGATGGAAGGAGAATG+GGG + chr7.1:11143003-11143022 MS.gene018729:intron 45.0%
GTAAGGTGAAATGTTGTCCG+GGG + chr7.1:11141534-11141553 MS.gene018729:intron 45.0%
TGAAGGTTACTGCAGTCTAG+CGG - chr7.1:11144144-11144163 None:intergenic 45.0%
TGGAACATTTGACAGTGCTG+AGG + chr7.1:11141775-11141794 MS.gene018729:intron 45.0%
TGGATCTTATCGTGTTGGGA+GGG + chr7.1:11141307-11141326 MS.gene018729:CDS 45.0%
TGGTAAGGATGGAAGGAGAA+TGG + chr7.1:11143001-11143020 MS.gene018729:intron 45.0%
! AAGGATGATAATGCTGCTGC+TGG + chr7.1:11141505-11141524 MS.gene018729:CDS 45.0%
! ATAATGGAGTATCTACCCGG+TGG + chr7.1:11143695-11143714 MS.gene018729:CDS 45.0%
! CTGCAGATTTGCTTGGCAAA+AGG + chr7.1:11141614-11141633 MS.gene018729:intron 45.0%
! CTTTTGCCAAGCAAATCTGC+AGG - chr7.1:11141616-11141635 None:intergenic 45.0%
! GAAGTCTTGTGCGAAACTTG+TGG + chr7.1:11141065-11141084 MS.gene018729:CDS 45.0%
! GTTTTCCAGGGAAATGTGGA+AGG + chr7.1:11141466-11141485 MS.gene018729:intron 45.0%
! TGAGTTTGATCAAGGCATCC+AGG - chr7.1:11142879-11142898 None:intergenic 45.0%
! TGCTGCTGTTGTGATTGGTT+AGG - chr7.1:11144234-11144253 None:intergenic 45.0%
!! GTGGTTCTGATTTCAGTGCT+TGG + chr7.1:11140654-11140673 MS.gene018729:CDS 45.0%
!!! GTTTTGTGGTTTGCTACTGC+TGG + chr7.1:11142198-11142217 MS.gene018729:intron 45.0%
CCAATCACAACAGCAGCAAC+TGG + chr7.1:11144236-11144255 MS.gene018729:CDS 50.0%
CCAGTTGCTGCTGTTGTGAT+TGG - chr7.1:11144239-11144258 None:intergenic 50.0%
GAAACTTGTGGCTGATGCGA+AGG + chr7.1:11141077-11141096 MS.gene018729:CDS 50.0%
GCTAGACTGCAGTAACCTTC+AGG + chr7.1:11144143-11144162 MS.gene018729:CDS 50.0%
GGGGAGATGCATAAATCGGA+AGG + chr7.1:11142442-11142461 MS.gene018729:intron 50.0%
GGGTGTTCCAACCGTAGAAT+AGG - chr7.1:11144693-11144712 None:intergenic 50.0%
GGTATGGCGTGGAATGTGAT+TGG + chr7.1:11144747-11144766 MS.gene018729:intron 50.0%
GTCATAAGCCTTCCGATACG+GGG + chr7.1:11142423-11142442 MS.gene018729:intron 50.0%
TCAGGGTTCTCTACGTGACA+AGG + chr7.1:11141992-11142011 MS.gene018729:intron 50.0%
TCGCAATGTGAAACTCCGGA+GGG - chr7.1:11143407-11143426 None:intergenic 50.0%
TTCGCAATGTGAAACTCCGG+AGG - chr7.1:11143408-11143427 None:intergenic 50.0%
TTCTCCACAACCAACACTGG+TGG - chr7.1:11142483-11142502 None:intergenic 50.0%
TTGCAGGCCTATTCTACGGT+TGG + chr7.1:11144683-11144702 MS.gene018729:intron 50.0%
! AGCAGCAACTGGAGCATTTG+CGG + chr7.1:11144247-11144266 MS.gene018729:CDS 50.0%
! ATGGTGCCTGCAGATTTGCT+TGG + chr7.1:11141607-11141626 MS.gene018729:intron 50.0%
ATGAGGGTCAGCAGTTACCC+CGG - chr7.1:11141554-11141573 None:intergenic 55.0%
ATGCATCTCCCCGTATCGGA+AGG - chr7.1:11142434-11142453 None:intergenic 55.0%
CATGTGGTCACCACCAGTGT+TGG + chr7.1:11142470-11142489 MS.gene018729:intron 55.0%
TCGTGTTGGGAGGGTCTGTA+TGG + chr7.1:11141316-11141335 MS.gene018729:CDS 55.0%
! CAAGCCCGACAACTTGCTTC+TGG + chr7.1:11144074-11144093 MS.gene018729:CDS 55.0%
! TCTGAAGAGAGGGTATGGCG+TGG + chr7.1:11144736-11144755 MS.gene018729:intron 55.0%
!! GTCACCACCAGTGTTGGTTG+TGG + chr7.1:11142476-11142495 MS.gene018729:intron 55.0%
GCTGCTGCTGGAGCGCAGTA+AGG + chr7.1:11141517-11141536 MS.gene018729:intron 65.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 11140620 11144859 11140620 ID=MS.gene018729
chr7.1 mRNA 11140620 11144859 11140620 ID=MS.gene018729.t1;Parent=MS.gene018729
chr7.1 exon 11140620 11140680 11140620 ID=MS.gene018729.t1.exon1;Parent=MS.gene018729.t1
chr7.1 CDS 11140620 11140680 11140620 ID=cds.MS.gene018729.t1;Parent=MS.gene018729.t1
chr7.1 exon 11141046 11141098 11141046 ID=MS.gene018729.t1.exon2;Parent=MS.gene018729.t1
chr7.1 CDS 11141046 11141098 11141046 ID=cds.MS.gene018729.t1;Parent=MS.gene018729.t1
chr7.1 exon 11141206 11141394 11141206 ID=MS.gene018729.t1.exon3;Parent=MS.gene018729.t1
chr7.1 CDS 11141206 11141394 11141206 ID=cds.MS.gene018729.t1;Parent=MS.gene018729.t1
chr7.1 exon 11141475 11141533 11141475 ID=MS.gene018729.t1.exon4;Parent=MS.gene018729.t1
chr7.1 CDS 11141475 11141533 11141475 ID=cds.MS.gene018729.t1;Parent=MS.gene018729.t1
chr7.1 exon 11143673 11143834 11143673 ID=MS.gene018729.t1.exon5;Parent=MS.gene018729.t1
chr7.1 CDS 11143673 11143834 11143673 ID=cds.MS.gene018729.t1;Parent=MS.gene018729.t1
chr7.1 exon 11144068 11144290 11144068 ID=MS.gene018729.t1.exon6;Parent=MS.gene018729.t1
chr7.1 CDS 11144068 11144290 11144068 ID=cds.MS.gene018729.t1;Parent=MS.gene018729.t1
chr7.1 exon 11144689 11144747 11144689 ID=MS.gene018729.t1.exon7;Parent=MS.gene018729.t1
chr7.1 CDS 11144689 11144747 11144689 ID=cds.MS.gene018729.t1;Parent=MS.gene018729.t1
chr7.1 exon 11144838 11144859 11144838 ID=MS.gene018729.t1.exon8;Parent=MS.gene018729.t1
chr7.1 CDS 11144838 11144859 11144838 ID=cds.MS.gene018729.t1;Parent=MS.gene018729.t1
Gene Sequence

>MS.gene018729

ATGTTTAAAACAAAAGATGTTTTAAAGAAAATTGGTGGTTCTGATTTCAGTGCTTGGACAAGTGAGTATGTACCTGCATATCGGTTAGAGATTGACCCCAAGATAATGGGAGATTGAAAGTTTCAGGGCTGGAAGAAGTCTTCAGAGAATAGGTGGGAAGTTCTTTTGACTCACTCTCAAATGGTACTTTATCTCTTCCTTTTGTATCGACCTTTATATTTTTAGTGATGTTTTTTTGTTATTTTATTATTAGTAGTTGTGGCTCAACTATTTAAGTAAGCCAAGTAGTGGACTTCATCTTTTGTCCGTAGTTTTATTAAAAAATAGAAGGAAAAGAATATAATTAGAAGAGATAAATAATGCTTATTACAAAACTCATTCAAAATCTGTGTTGAATAATTTCAGTACTTAGTATTTGACATTCAGACAATCTTTTCATTGTTAAGAAGTCTTGTGCGAAACTTGTGGCTGATGCGAAGGTTAGTTTCAAGATCAAATGTGTGTGCCAAGTAAAGTAGTGTAATCAAGTAAATTTATGTGTATGTTTAACACTTATATGTCATGTTTAACGATTTCAAATGTGCAGGGTGAAAATGCTGGTTTTTATCCATCTGAGCTGAAAAATCTCATTGGTCACAAGATGCTTTTTGTTGTTGATCATTCATCCAATGCAGTTTCCAGGTCTGATGGATCTTATCGTGTTGGGAGGGTCTGTATGGATGCTAAAATTATTGAAGTGTTTGAGGATGGGGATGCAAATTTTTCAAATGTCAAGGTTGGACAGTGATTGCTGTGTGAAGATATTATTTTAGATTTATATAGAAAAATAATGTATTTCTCATTTTTGTTTTCCAGGGAAATGTGGAAGGTTCTTCTGCATTGAATAAGGATGATAATGCTGCTGCTGGAGCGCAGTAAGGTGAAATGTTGTCCGGGGTAACTGCTGACCCTCATGATTTTGTCAAGGGTTCTGTTTTGTTGCCTAAGATGGTGCCTGCAGATTTGCTTGGCAAAAGGAAATTGACTAAGGTTGGTTCATGACATAATTGTGTTTTTTGGTTTAAAACTGTCATATATAGGTGTGAGAAAAAGACTTTGGGGAAAATATGCAGCAGAGATCAGAGACACAACAAGAAAAGGAAGAAGTGTTTGGCTTGGAACATTTGACAGTGCTGAGGATGCTGCTTTAGCTTACGATCTAGCTGCATTTTCAATGAGGTAATAATCTTGTGCTCAATTTTTCTGTTCAAAGGGTCAAAGGATATTTGCAAGAGATTCAATGTGATTGCAGAAAGGGTTTTCACCTGCACTTGCATTCAAAATTCAAATTAAAGTCTTGAAATGTATTGTTGTCTGAATTGAATAATTTTTGTCAGGGTTCTCTACGTGACAAGGCAAGCAGATGAATATGTAATTCGTCGCGATGATTGGTTTTAAATCGTTTCTTCTCCACACTATCTCTCTGAAATTGTACTCCCTTTCGTTCTGTCTCTATAATTTATACTTTTCTATTGCTTATACTGCAATGATTCATCTAACTAAGCCTATATTTGATACTGTTGAAGGTTATATACGCCAGTTTTGTGGTTTGCTACTGCTGGATCAAATCTAACAATCTGGCTACTTATATTTCTGTTCTCCGCCTGTTTTTCTTTTAAATTTAAAATATATCTTGATTGTGTTATAACAGTCCTTAACTGCTCATAGTGGTTTCAGTTCATGTCTTCATTCCTTTTCCTCCTCTTATTTGGATTGCTGAACCGCCTGTTTTAGCAATATGCAGATGATTCGGACATTTAATTAGTCATAAGCCTTCCGATACGGGGAGATGCATAAATCGGAAGGCAGTACATGTGGTCACCACCAGTGTTGGTTGTGGAGAAATTTTTTTCCCTATGGTACTTTAATTTTATTAAGCTTTTTCCCACTCAATTAGTTTTGCTTCTTATGTGTGTTTAGCTTCTATGTCCATGTTGAACTTTACAATTACTATCTAGGTACAACATGAACCTTGACTCTTATAGGGTAATTTGATGAAATATTTATGGCATGGAGCCAAAAACATATATAACATGCTGTTTGTTAAATTTGAATGTTTAGACTAGACATAGTAGTCCTGATTGCAAAGAGATATGGGAGATGAAAAACTTTGATGTGGTCATATACAATTTCTGATTAGGTAGACATTAGAAAAAATGGAAAAGTGATGAAATTGTAAAATATTAGTAAAATTCATTGGAAAGAAATGTGTTTTTGCCTGGATGCCTTGATCAAACTCAAATATATAGAAAATCCGACAGATATGTTGGAAACAGTTTGGGGATAACTGCAGGGTATGAATAGTTTAATCTCTCTATCTGAGTTAATTTATTTTGACCATTTGGTAAGGATGGAAGGAGAATGGGGTTATATGTTGGGCTTATTTGGATTGGTTTATTTGAGTTTATCTACTTGTGTATGCACTTGTGATACTGTTTGTAAGAGCTTATGAAAACAATTTATGACATGTCCATAACCTTTTTCTAACTCATTTTCCTAAGCTCCTCAAGTATAGCTTATGAATATAACTCATAGCTTATTTCAATAAGCTCTCTAAGACATTGTTTAAGTTCAGAATCAGCACAATACATTGAATGCTTTTCGTATGAATTGTCTGTTACCATGCAAAAGAATAGTCTGTTTAAGTTATTGAACTTATTTTCTTGGTGGATCCTATTCAATGCACATTGTATGACAGATTTGATCAGAGATCATGCACATGAAAAAAAAAGATGACTTTCTTTTCCCTCCGGAGTTTCACATTGCGAAAGAGTTAAATAATGGAATTGAGATAATAGTAATGACGAAACTTGCGAAAATCGTGAGTTAAATCAGAGATGCTTTGTAGAGGACAGGTATTGGAATTATCAGTGTTAGATTGAGCAAATATTATTTTCTTTTACTTATCAGGTGCTTTTATGTTTTTGATTAGGTTGAATATGTCAAATCTGAAAGGAACCTTCTTGCAGAAGTTGATAGCAATTGCATTGTAAAACTTTATTGTTCCTTTCAAGATGGCGAGTATTTATATCTCATATAATGGAGTATCTACCCGGTGGAGATATGATGACGTTGTTGATGCGGAAAGAAGTACTGACTGAAGATGAAGCTAAGTTCTATATCGAGGAGACTGTGCTAGCCATAGAGTCTATTCATAAACATAATTATATTCATAGGTCCGCTTAATCTGTAATCACTATTGTTTTGCGAAATCCTATTTAGTATAAGATTGTAGCTTAACTGAGTTTTGACAAACCGTTATTTTCAACGAAATCACTATTGTTTTGGAATTTTCAGTGTTAGATTGTAGGGTACTTAACTTTACGACATGGATCTTGAATACCGATCATTCGGAGGTATTCATTTTAATCAAGAAATATTTAATATTCTGATTAATTGCATTTTACAGAGATATCAAGCCCGACAACTTGCTTCTGGATAGAAATGGTCACGTGAAATTATCAGATTTTGGATTATGTAAGCCGCTAGACTGCAGTAACCTTCAGGAAAAAGACTTATCTAATGGAGTTAACATAAGTGGAGTCCTTCAAAGTGATGAACTTGCTTTATCTCCTAACCAATCACAACAGCAGCAACTGGAGCATTTGCGGAAAAATCGCAGCAGAATGCTGGTAAGTCTCTCAAATAAACACATTCATAAATAAGCATGATTTTTTTTTTTTTAACATAGCAAACTTTATTATAAAACGGCGAGACTCACAACACGAGTACTCACAAAACGTATTCATAAATAAGTATGATTACTTTGTTCAAAGCGGCCTACACCTTTTTTCAGTTATAATAAAAATTCAGTCATTATTCTTTCGTTATGTTTGGACTTCGGTTCTTTTGTTATATTTTTGTTTGGTTAGTAACTTAGAGTCTAGCATCATTTACATCATATATCAATTTGGGTTATTGCTTTATATTCTATCCTTTAAAGACTATTCTCTCTTTTGATTGTATGGCTGCTCTACTTAGATTCATCATTAATGACGTTTTAAGCTTTTCTATCTTTGTGATATTGCAGGCCTATTCTACGGTTGGAACACCCGATTATATTGCTCCAGAAGTTATTCTGAAGAGAGGGTATGGCGTGGAATGTGATTGGTATAATAGTATATGGCGTTGAAAGCTTGGCAAGTTTGCATTACTGAGAAGAAGTGAATAACTTCTCAGGTCTGCTGCTGATAATCTCTAA
Protein sequence

>MS.gene018729.t1

MFKTKDVLKKIGGSDFSAWTNNLFIVKKSCAKLVADAKGENAGFYPSELKNLIGHKMLFVVDHSSNAVSRSDGSYRVGRVCMDAKIIEVFEDGDANFSNVKGNVEGSSALNKDDNAAAGAQWRVFISHIMEYLPGGDMMTLLMRKEVLTEDEAKFYIEETVLAIESIHKHNYIHRDIKPDNLLLDRNGHVKLSDFGLCKPLDCSNLQEKDLSNGVNISGVLQSDELALSPNQSQQQQLEHLRKNRSRMLAYSTVGTPDYIAPEVILKRGSAADNL