Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018893.t1 | XP_024632961.1 | 91.9 | 407 | 25 | 1 | 10 | 408 | 44 | 450 | 6.10E-218 | 766.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018893.t1 | Q9SZL8 | 28.0 | 400 | 260 | 7 | 4 | 392 | 51 | 433 | 1.1e-42 | 175.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018893.t1 | D3YBB9 | 79.3 | 406 | 84 | 0 | 3 | 408 | 69 | 474 | 6.6e-190 | 672.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene018893.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018893.t1 | MTR_0558s0020 | 91.336 | 277 | 24 | 0 | 1 | 277 | 20 | 296 | 0.0 | 536 |
| MS.gene018893.t1 | MTR_1g083640 | 93.254 | 252 | 17 | 0 | 1 | 252 | 35 | 286 | 2.90e-179 | 500 |
| MS.gene018893.t1 | MTR_8g446020 | 76.895 | 277 | 24 | 2 | 1 | 277 | 20 | 256 | 2.61e-150 | 426 |
| MS.gene018893.t1 | MTR_6g090505 | 76.895 | 277 | 54 | 1 | 47 | 313 | 1 | 277 | 8.90e-150 | 429 |
| MS.gene018893.t1 | MTR_2g014100 | 89.352 | 216 | 23 | 0 | 3 | 218 | 30 | 245 | 2.12e-143 | 408 |
| MS.gene018893.t1 | MTR_3g008240 | 89.130 | 184 | 20 | 0 | 1 | 184 | 20 | 203 | 3.63e-119 | 345 |
| MS.gene018893.t1 | MTR_4g040430 | 88.043 | 184 | 17 | 2 | 1 | 184 | 20 | 198 | 5.72e-115 | 334 |
| MS.gene018893.t1 | MTR_0337s0040 | 68.699 | 246 | 38 | 1 | 1 | 246 | 20 | 226 | 1.10e-114 | 334 |
| MS.gene018893.t1 | MTR_5g071590 | 86.667 | 150 | 17 | 1 | 1 | 150 | 35 | 181 | 1.66e-94 | 281 |
| MS.gene018893.t1 | MTR_0019s0290 | 86.842 | 152 | 20 | 0 | 64 | 215 | 9 | 160 | 7.52e-93 | 276 |
| MS.gene018893.t1 | MTR_1g055240 | 89.510 | 143 | 15 | 0 | 72 | 214 | 2 | 144 | 1.96e-90 | 270 |
| MS.gene018893.t1 | MTR_1281s0010 | 93.578 | 109 | 7 | 0 | 1 | 109 | 1 | 109 | 1.59e-69 | 215 |
| MS.gene018893.t1 | MTR_6g051425 | 28.443 | 334 | 203 | 7 | 22 | 334 | 22 | 340 | 7.69e-34 | 129 |
| MS.gene018893.t1 | MTR_4g008820 | 85.246 | 61 | 9 | 0 | 1 | 61 | 144 | 204 | 8.38e-28 | 116 |
| MS.gene018893.t1 | MTR_8g046060 | 91.228 | 57 | 5 | 0 | 5 | 61 | 122 | 178 | 8.81e-28 | 109 |
| MS.gene018893.t1 | MTR_1g070355 | 27.126 | 247 | 161 | 4 | 23 | 269 | 80 | 307 | 4.29e-17 | 83.6 |
| MS.gene018893.t1 | MTR_0337s0050 | 77.778 | 36 | 8 | 0 | 241 | 276 | 14 | 49 | 9.50e-13 | 63.9 |
| MS.gene018893.t1 | MTR_0402s0040 | 25.405 | 185 | 119 | 4 | 31 | 215 | 40 | 205 | 1.64e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018893.t1 | AT4G38180 | 28.684 | 380 | 242 | 7 | 16 | 388 | 72 | 429 | 1.42e-46 | 171 |
| MS.gene018893.t1 | AT3G06250 | 25.128 | 390 | 229 | 7 | 5 | 392 | 178 | 506 | 5.79e-35 | 137 |
| MS.gene018893.t1 | AT3G06250 | 25.128 | 390 | 229 | 7 | 5 | 392 | 178 | 506 | 5.79e-35 | 137 |
| MS.gene018893.t1 | AT3G06250 | 25.128 | 390 | 229 | 7 | 5 | 392 | 178 | 506 | 5.79e-35 | 137 |
| MS.gene018893.t1 | AT2G27110 | 31.100 | 209 | 142 | 1 | 193 | 399 | 179 | 387 | 1.18e-32 | 130 |
| MS.gene018893.t1 | AT2G27110 | 31.100 | 209 | 142 | 1 | 193 | 399 | 179 | 387 | 1.18e-32 | 130 |
| MS.gene018893.t1 | AT2G27110 | 31.100 | 209 | 142 | 1 | 193 | 399 | 34 | 242 | 1.51e-32 | 130 |
| MS.gene018893.t1 | AT5G28530 | 27.475 | 404 | 252 | 11 | 22 | 407 | 60 | 440 | 3.53e-31 | 126 |
| MS.gene018893.t1 | AT5G28530 | 27.475 | 404 | 252 | 11 | 22 | 407 | 60 | 440 | 3.53e-31 | 126 |
| MS.gene018893.t1 | AT5G28530 | 27.475 | 404 | 252 | 11 | 22 | 407 | 60 | 440 | 3.71e-31 | 126 |
| MS.gene018893.t1 | AT1G76320 | 26.431 | 367 | 232 | 10 | 32 | 392 | 12 | 346 | 5.89e-30 | 122 |
| MS.gene018893.t1 | AT1G76320 | 25.886 | 367 | 234 | 9 | 32 | 392 | 12 | 346 | 1.03e-29 | 122 |
| MS.gene018893.t1 | AT1G76320 | 25.886 | 367 | 234 | 9 | 32 | 392 | 12 | 346 | 1.03e-29 | 122 |
| MS.gene018893.t1 | AT1G76320 | 25.886 | 367 | 234 | 9 | 32 | 392 | 12 | 346 | 1.07e-29 | 122 |
| MS.gene018893.t1 | AT5G18960 | 25.275 | 364 | 203 | 10 | 3 | 359 | 197 | 498 | 1.33e-29 | 121 |
| MS.gene018893.t1 | AT5G18960 | 25.275 | 364 | 203 | 10 | 3 | 359 | 197 | 498 | 1.33e-29 | 121 |
| MS.gene018893.t1 | AT1G80010 | 26.425 | 386 | 236 | 12 | 23 | 392 | 101 | 454 | 1.68e-29 | 121 |
| MS.gene018893.t1 | AT4G15090 | 25.205 | 365 | 248 | 9 | 32 | 392 | 66 | 409 | 1.38e-28 | 119 |
| MS.gene018893.t1 | AT4G15090 | 25.205 | 365 | 248 | 9 | 32 | 392 | 66 | 409 | 1.38e-28 | 119 |
| MS.gene018893.t1 | AT4G15090 | 25.205 | 365 | 248 | 9 | 32 | 392 | 66 | 409 | 1.38e-28 | 119 |
| MS.gene018893.t1 | AT4G15090 | 25.205 | 365 | 248 | 9 | 32 | 392 | 66 | 409 | 1.38e-28 | 119 |
| MS.gene018893.t1 | AT4G15090 | 25.205 | 365 | 248 | 9 | 32 | 392 | 66 | 409 | 1.38e-28 | 119 |
| MS.gene018893.t1 | AT1G10240 | 26.371 | 383 | 246 | 12 | 22 | 392 | 53 | 411 | 2.61e-28 | 117 |
| MS.gene018893.t1 | AT1G10240 | 26.371 | 383 | 246 | 12 | 22 | 392 | 53 | 411 | 2.61e-28 | 117 |
| MS.gene018893.t1 | AT2G32250 | 26.598 | 391 | 215 | 13 | 7 | 392 | 30 | 353 | 5.48e-28 | 117 |
| MS.gene018893.t1 | AT2G32250 | 26.598 | 391 | 215 | 13 | 7 | 392 | 30 | 353 | 6.43e-28 | 116 |
| MS.gene018893.t1 | AT2G32250 | 26.598 | 391 | 215 | 13 | 7 | 392 | 30 | 353 | 6.43e-28 | 116 |
| MS.gene018893.t1 | AT2G32250 | 26.598 | 391 | 215 | 13 | 7 | 392 | 30 | 353 | 6.69e-28 | 116 |
| MS.gene018893.t1 | AT2G32250 | 26.598 | 391 | 215 | 13 | 7 | 392 | 30 | 353 | 6.69e-28 | 116 |
| MS.gene018893.t1 | AT2G32250 | 26.598 | 391 | 215 | 13 | 7 | 392 | 30 | 353 | 6.69e-28 | 116 |
| MS.gene018893.t1 | AT2G32250 | 26.648 | 364 | 201 | 11 | 32 | 392 | 12 | 312 | 8.98e-28 | 116 |
| MS.gene018893.t1 | AT2G32250 | 26.648 | 364 | 201 | 11 | 32 | 392 | 12 | 312 | 9.51e-28 | 116 |
| MS.gene018893.t1 | AT4G38170 | 30.601 | 183 | 120 | 3 | 217 | 396 | 24 | 202 | 6.41e-26 | 110 |
| MS.gene018893.t1 | AT1G52520 | 24.934 | 377 | 242 | 9 | 23 | 394 | 91 | 431 | 1.84e-24 | 106 |
| MS.gene018893.t1 | AT3G22170 | 23.097 | 381 | 254 | 9 | 14 | 388 | 67 | 414 | 1.90e-24 | 106 |
| MS.gene018893.t1 | AT3G22170 | 23.097 | 381 | 254 | 9 | 14 | 388 | 67 | 414 | 1.90e-24 | 106 |
| MS.gene018893.t1 | AT4G19990 | 24.595 | 370 | 232 | 10 | 23 | 388 | 27 | 353 | 2.77e-23 | 102 |
| MS.gene018893.t1 | AT4G19990 | 24.595 | 370 | 232 | 10 | 23 | 388 | 27 | 353 | 2.77e-23 | 102 |
| MS.gene018893.t1 | AT4G19990 | 24.595 | 370 | 232 | 10 | 23 | 388 | 41 | 367 | 3.04e-23 | 102 |
| MS.gene018893.t1 | AT4G19990 | 24.595 | 370 | 232 | 10 | 23 | 388 | 27 | 353 | 3.08e-23 | 102 |
| MS.gene018893.t1 | AT4G19990 | 24.595 | 370 | 232 | 10 | 23 | 388 | 27 | 353 | 3.61e-23 | 102 |
| MS.gene018893.t1 | AT4G19990 | 24.595 | 370 | 232 | 10 | 23 | 388 | 27 | 353 | 3.61e-23 | 102 |
| MS.gene018893.t1 | AT4G19990 | 30.729 | 192 | 128 | 4 | 201 | 388 | 106 | 296 | 1.42e-21 | 97.4 |
Find 0 sgRNAs with CRISPR-Local
Find 100 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGATGAAAAATTGTTTTAA+TGG | + | 23427:66294-66313 | MS.gene018893:CDS | 15.0% |
| !! | ACAAAATAAGAAATCTGATA+AGG | + | 23427:64648-64667 | MS.gene018893:CDS | 20.0% |
| !! | ATCGAACAAAGAATATATAT+CGG | + | 23427:65286-65305 | MS.gene018893:CDS | 20.0% |
| !! | ATGTGTATAAGATATATAGA+TGG | + | 23427:64851-64870 | MS.gene018893:CDS | 20.0% |
| !! | TCTTACTTATTTAAACTACA+GGG | + | 23427:65471-65490 | MS.gene018893:intron | 20.0% |
| !! | TGTGTATAAGATATATAGAT+GGG | + | 23427:64852-64871 | MS.gene018893:CDS | 20.0% |
| !! | TTCTTACTTATTTAAACTAC+AGG | + | 23427:65470-65489 | MS.gene018893:intron | 20.0% |
| !!! | AAAGAGATTGAAGATTTTTA+TGG | + | 23427:64565-64584 | MS.gene018893:CDS | 20.0% |
| !!! | AATCAGATTTTGACTATAAT+TGG | + | 23427:66265-66284 | MS.gene018893:CDS | 20.0% |
| !!! | ATCAGATTTTGACTATAATT+GGG | + | 23427:66266-66285 | MS.gene018893:CDS | 20.0% |
| !!! | ATTTATATTTTGAACTACCT+AGG | + | 23427:65619-65638 | MS.gene018893:intron | 20.0% |
| !!! | GTTGTATTTTGTTCTAATAT+AGG | + | 23427:65915-65934 | MS.gene018893:intron | 20.0% |
| !!! | TGAAAAATTGTTTTAATGGA+AGG | + | 23427:66298-66317 | MS.gene018893:CDS | 20.0% |
| !!! | TTTTGATGAGTTAACTAATT+TGG | + | 23427:66224-66243 | MS.gene018893:CDS | 20.0% |
| ! | AGTAAAAAACACTAACCTAA+TGG | - | 23427:65312-65331 | MS.gene018893:intergenic | 25.0% |
| ! | ATGATTGTCAAAACCAATAA+AGG | - | 23427:65959-65978 | MS.gene018893:intergenic | 25.0% |
| ! | CAAACTTAAATGATGTTGAT+TGG | + | 23427:65595-65614 | MS.gene018893:intron | 25.0% |
| ! | CAACTAGATTATTCTCTATT+CGG | + | 23427:65237-65256 | MS.gene018893:CDS | 25.0% |
| ! | CTTACTTATTTAAACTACAG+GGG | + | 23427:65472-65491 | MS.gene018893:intron | 25.0% |
| ! | TGGATATCATAGTAAAAAGA+TGG | - | 23427:65165-65184 | MS.gene018893:intergenic | 25.0% |
| !! | ATAACACTGGATTTTCTATT+AGG | + | 23427:64599-64618 | MS.gene018893:CDS | 25.0% |
| !! | TGTTTACTTTCATTTTGTTC+TGG | + | 23427:65352-65371 | MS.gene018893:intron | 25.0% |
| !!! | AAGACATAGCTAGTATTTTT+TGG | + | 23427:65199-65218 | MS.gene018893:CDS | 25.0% |
| !!! | AGACATAGCTAGTATTTTTT+GGG | + | 23427:65200-65219 | MS.gene018893:CDS | 25.0% |
| !!! | AGATAACAACTACTTTTGAT+TGG | + | 23427:66019-66038 | MS.gene018893:CDS | 25.0% |
| !!! | GAATGATTTGGTTTATGTAA+TGG | - | 23427:64895-64914 | MS.gene018893:intergenic | 25.0% |
| AAAAACCCCATGAAAACAAA+TGG | - | 23427:65537-65556 | MS.gene018892:intergenic | 30.0% | |
| AAAACACCTGGAAAACTATT+CGG | - | 23427:66132-66151 | MS.gene018892:intergenic | 30.0% | |
| AACAAACAAGGTTTCAAGAA+GGG | + | 23427:64694-64713 | MS.gene018893:CDS | 30.0% | |
| AAGAATATATATCGGCCATT+AGG | + | 23427:65294-65313 | MS.gene018893:CDS | 30.0% | |
| AGAACGTCTAATGAAGTTAT+GGG | + | 23427:64997-65016 | MS.gene018893:CDS | 30.0% | |
| CGTTATGTTTGTAACAAACA+AGG | + | 23427:64682-64701 | MS.gene018893:CDS | 30.0% | |
| GAGAATGCAAAGAAAAATCT+TGG | + | 23427:66180-66199 | MS.gene018893:CDS | 30.0% | |
| TAAATTTCAGCTGCCTTTAT+TGG | + | 23427:65943-65962 | MS.gene018893:intron | 30.0% | |
| TAACAAACAAGGTTTCAAGA+AGG | + | 23427:64693-64712 | MS.gene018893:CDS | 30.0% | |
| TAAGAACTATAGTCAAACCT+AGG | - | 23427:65456-65475 | MS.gene018893:intergenic | 30.0% | |
| TAAGATATATAGATGGGATG+TGG | + | 23427:64858-64877 | MS.gene018893:CDS | 30.0% | |
| TTACTTCTCGAAATGATCTA+AGG | - | 23427:64924-64943 | MS.gene018893:intergenic | 30.0% | |
| TTCACAAACTCAATAACCAA+TGG | - | 23427:64760-64779 | MS.gene018893:intergenic | 30.0% | |
| ! | TTAACCATGCTGTTTGTTTA+GGG | + | 23427:65496-65515 | MS.gene018893:intron | 30.0% |
| ! | TTTAACCATGCTGTTTGTTT+AGG | + | 23427:65495-65514 | MS.gene018893:intron | 30.0% |
| !! | GCTCTTATAAATTCTAAAGC+TGG | + | 23427:64964-64983 | MS.gene018893:CDS | 30.0% |
| !!! | CATCGTAAGAGTGTTTTATT+TGG | + | 23427:65976-65995 | MS.gene018893:CDS | 30.0% |
| AAATCCCTAAACAAACAGCA+TGG | - | 23427:65503-65522 | MS.gene018892:intergenic | 35.0% | |
| AATTCGTCAAAAAGAGATGG+TGG | + | 23427:65086-65105 | MS.gene018893:CDS | 35.0% | |
| ATTGAGTTTACGCATTGTTG+AGG | + | 23427:65733-65752 | MS.gene018893:intron | 35.0% | |
| CAGATATCAAACCTGAAAGA+TGG | + | 23427:65565-65584 | MS.gene018893:intron | 35.0% | |
| CGAGAAGTAAATGAAGTTCA+AGG | + | 23427:64934-64953 | MS.gene018893:CDS | 35.0% | |
| CTAAGGTAACACGAATGATT+TGG | - | 23427:64907-64926 | MS.gene018893:intergenic | 35.0% | |
| CTGGCATGTGTATTATAAGT+AGG | + | 23427:65414-65433 | MS.gene018893:intron | 35.0% | |
| GAAAGAAAAACCTGAGGAAA+GGG | + | 23427:64783-64802 | MS.gene018893:CDS | 35.0% | |
| GAAAGTGAAAGAAAAACCTG+AGG | + | 23427:64777-64796 | MS.gene018893:CDS | 35.0% | |
| GACAATTCGTCAAAAAGAGA+TGG | + | 23427:65083-65102 | MS.gene018893:CDS | 35.0% | |
| GAGAACGTCTAATGAAGTTA+TGG | + | 23427:64996-65015 | MS.gene018893:CDS | 35.0% | |
| GGTAACTATGCATATAACAC+TGG | + | 23427:64586-64605 | MS.gene018893:CDS | 35.0% | |
| TATCGTCTGTGGTTTCTTAT+TGG | - | 23427:66073-66092 | MS.gene018893:intergenic | 35.0% | |
| TCCATGATTCTTCATTGCTA+GGG | - | 23427:64522-64541 | MS.gene018893:intergenic | 35.0% | |
| TCTAATGAAGTTATGGGTCA+AGG | + | 23427:65003-65022 | MS.gene018893:CDS | 35.0% | |
| TGAAAGAAAAACCTGAGGAA+AGG | + | 23427:64782-64801 | MS.gene018893:CDS | 35.0% | |
| TTCCATGATTCTTCATTGCT+AGG | - | 23427:64523-64542 | MS.gene018893:intergenic | 35.0% | |
| TTGTCTAAGTACAAATGCCT+AGG | - | 23427:65639-65658 | MS.gene018893:intergenic | 35.0% | |
| TTTAAGCCTGAAAACCGAAA+AGG | - | 23427:65051-65070 | MS.gene018893:intergenic | 35.0% | |
| TTTGTCTCAAACCATCTTTC+AGG | - | 23427:65579-65598 | MS.gene018893:intergenic | 35.0% | |
| ! | AATCTTCCTTTTCGGTTTTC+AGG | + | 23427:65042-65061 | MS.gene018893:CDS | 35.0% |
| ! | AGTTTTCCAGGTGTTTTTCA+TGG | + | 23427:66135-66154 | MS.gene018893:CDS | 35.0% |
| ! | GTTTTCCAGGTGTTTTTCAT+GGG | + | 23427:66136-66155 | MS.gene018893:CDS | 35.0% |
| ! | TCAATTCCGAATAGTTTTCC+AGG | + | 23427:66123-66142 | MS.gene018893:CDS | 35.0% |
| ! | TGCATGTTGCATTTTTGTTC+TGG | + | 23427:65395-65414 | MS.gene018893:intron | 35.0% |
| !! | AGCTGGAATATCTTTGAAGT+TGG | + | 23427:64816-64835 | MS.gene018893:CDS | 35.0% |
| !! | CATCTTTCAGGTTTGATATC+TGG | - | 23427:65567-65586 | MS.gene018893:intergenic | 35.0% |
| !! | CTTCTGCCATTTGTTTTCAT+GGG | + | 23427:65528-65547 | MS.gene018893:intron | 35.0% |
| !! | TCTGATGTTGTCTTGTTGTT+AGG | - | 23427:64733-64752 | MS.gene018893:intergenic | 35.0% |
| !! | TTCTGCCATTTGTTTTCATG+GGG | + | 23427:65529-65548 | MS.gene018893:intron | 35.0% |
| !!! | GCTAGTATTTTTTGGGTAGA+TGG | + | 23427:65207-65226 | MS.gene018893:CDS | 35.0% |
| !!! | TTTTTCATGGGCTTTGTTCA+TGG | + | 23427:66148-66167 | MS.gene018893:CDS | 35.0% |
| ACAGACGATATATACAGACC+AGG | + | 23427:66083-66102 | MS.gene018893:CDS | 40.0% | |
| CCATGATTCTTCATTGCTAG+GGG | - | 23427:64521-64540 | MS.gene018893:intergenic | 40.0% | |
| TGGTCTGTATATATCGTCTG+TGG | - | 23427:66084-66103 | MS.gene018893:intergenic | 40.0% | |
| TTGCGATTACAGACCACTAA+GGG | + | 23427:65772-65791 | MS.gene018893:intron | 40.0% | |
| ! | AGCAAGCTAAAGTCTGAAGT+TGG | - | 23427:66324-66343 | MS.gene018893:intergenic | 40.0% |
| ! | CGATCACACAAGACATTTTC+AGG | - | 23427:65663-65682 | MS.gene018893:intergenic | 40.0% |
| ! | GAGTACATTTTGAACTGCCT+AGG | + | 23427:65436-65455 | MS.gene018893:intron | 40.0% |
| ! | GCACGAAGAATCTTCCTTTT+CGG | + | 23427:65034-65053 | MS.gene018893:CDS | 40.0% |
| !! | GCTTCTGCCATTTGTTTTCA+TGG | + | 23427:65527-65546 | MS.gene018893:intron | 40.0% |
| AACACAATAACGCACTAGCC+TGG | - | 23427:66104-66123 | MS.gene018893:intergenic | 45.0% | |
| AAGTCCAATCCAACCCTTAG+TGG | - | 23427:65788-65807 | MS.gene018893:intergenic | 45.0% | |
| CAAAGCCCATGAAAAACACC+TGG | - | 23427:66144-66163 | MS.gene018893:intergenic | 45.0% | |
| CCCCTAGCAATGAAGAATCA+TGG | + | 23427:64518-64537 | MS.gene018893:CDS | 45.0% | |
| CTTGCGATTACAGACCACTA+AGG | + | 23427:65771-65790 | MS.gene018893:intron | 45.0% | |
| GAAAAACCTGAGGAAAGGGT+TGG | + | 23427:64787-64806 | MS.gene018893:CDS | 45.0% | |
| GAAGTTATGGGTCAAGGAGT+TGG | + | 23427:65009-65028 | MS.gene018893:CDS | 45.0% | |
| GACAACATCAGACAGTCCAT+TGG | + | 23427:64741-64760 | MS.gene018893:CDS | 45.0% | |
| GATTACAGACCACTAAGGGT+TGG | + | 23427:65776-65795 | MS.gene018893:intron | 45.0% | |
| TGTCTTCTGCAGCATCAACT+TGG | - | 23427:65185-65204 | MS.gene018893:intergenic | 45.0% | |
| TTACAACCAACCCTTTCCTC+AGG | - | 23427:64796-64815 | MS.gene018893:intergenic | 45.0% | |
| ! | CGTCAAAAAGAGATGGTGGT+TGG | + | 23427:65090-65109 | MS.gene018893:CDS | 45.0% |
| !! | GAAAGGGTTGGTTGTAAAGC+TGG | + | 23427:64799-64818 | MS.gene018893:CDS | 45.0% |
| CAGACCACTAAGGGTTGGAT+TGG | + | 23427:65781-65800 | MS.gene018893:intron | 50.0% | |
| GTTATGGGTCAAGGAGTTGG+AGG | + | 23427:65012-65031 | MS.gene018893:CDS | 50.0% | |
| !! | TGGGCTTTGTTCATGGCACA+TGG | + | 23427:66155-66174 | MS.gene018893:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 23427 | gene | 64487 | 66350 | 64487 | ID=MS.gene018893 |
| 23427 | mRNA | 64487 | 66350 | 64487 | ID=MS.gene018893.t1;Parent=MS.gene018893 |
| 23427 | exon | 64487 | 65315 | 64487 | ID=MS.gene018893.t1.exon1;Parent=MS.gene018893.t1 |
| 23427 | CDS | 64487 | 65315 | 64487 | ID=cds.MS.gene018893.t1;Parent=MS.gene018893.t1 |
| 23427 | exon | 65953 | 66350 | 65953 | ID=MS.gene018893.t1.exon2;Parent=MS.gene018893.t1 |
| 23427 | CDS | 65953 | 66350 | 65953 | ID=cds.MS.gene018893.t1;Parent=MS.gene018893.t1 |
| Gene Sequence |
| Protein sequence |
