Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019117.t1 | XP_013459518.1 | 90.5 | 524 | 33 | 2 | 1 | 524 | 1 | 507 | 8.50E-265 | 922.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019117.t1 | F4HY56 | 29.3 | 239 | 117 | 6 | 8 | 244 | 27 | 215 | 2.8e-14 | 81.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019117.t1 | A0A072UUN9 | 90.5 | 524 | 33 | 2 | 1 | 524 | 1 | 507 | 6.1e-265 | 922.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene019117.t1 | TF | HB-other |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019117.t1 | MTR_3g045830 | 90.458 | 524 | 33 | 2 | 1 | 524 | 1 | 507 | 0.0 | 947 |
| MS.gene019117.t1 | MTR_5g089870 | 57.636 | 550 | 199 | 8 | 1 | 523 | 1 | 543 | 0.0 | 563 |
| MS.gene019117.t1 | MTR_4g088375 | 49.231 | 65 | 31 | 1 | 13 | 75 | 24 | 88 | 3.92e-12 | 69.7 |
| MS.gene019117.t1 | MTR_4g088375 | 49.231 | 65 | 31 | 1 | 13 | 75 | 24 | 88 | 3.95e-12 | 69.7 |
| MS.gene019117.t1 | MTR_4g088375 | 49.231 | 65 | 31 | 1 | 13 | 75 | 24 | 88 | 4.03e-12 | 69.7 |
| MS.gene019117.t1 | MTR_2g014490 | 50.909 | 55 | 27 | 0 | 21 | 75 | 43 | 97 | 1.35e-11 | 68.2 |
| MS.gene019117.t1 | MTR_2g014490 | 50.909 | 55 | 27 | 0 | 21 | 75 | 43 | 97 | 1.39e-11 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019117.t1 | AT4G03250 | 38.909 | 550 | 254 | 21 | 6 | 523 | 7 | 506 | 2.65e-74 | 244 |
| MS.gene019117.t1 | AT1G28420 | 54.545 | 55 | 25 | 0 | 21 | 75 | 42 | 96 | 4.35e-13 | 72.8 |
| MS.gene019117.t1 | AT5G44180 | 49.153 | 59 | 30 | 0 | 17 | 75 | 16 | 74 | 4.94e-12 | 69.3 |
| MS.gene019117.t1 | AT5G44180 | 49.153 | 59 | 30 | 0 | 17 | 75 | 16 | 74 | 5.37e-12 | 69.3 |
| MS.gene019117.t1 | AT5G44180 | 49.153 | 59 | 30 | 0 | 17 | 75 | 16 | 74 | 5.37e-12 | 69.3 |
Find 125 sgRNAs with CRISPR-Local
Find 320 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTATATCCTGTAGGATTTA+AGG | 0.153067 | 3.3:-35061454 | None:intergenic |
| CAAACTGCAAATCCAGTTAA+TGG | 0.227706 | 3.3:+35061621 | MS.gene019117:CDS |
| GCATAATTCTCGAATTTCTA+TGG | 0.231441 | 3.3:+35063349 | MS.gene019117:CDS |
| CACCTTCCATTTGTAAATCT+TGG | 0.234276 | 3.3:-35062953 | None:intergenic |
| CATGCATGATTCTGATTTCC+AGG | 0.310702 | 3.3:+35062989 | MS.gene019117:CDS |
| TTTAGACACGATTGCCTGTT+TGG | 0.320667 | 3.3:-35062399 | None:intergenic |
| ACCATGACTCTCAACCTCTT+TGG | 0.325414 | 3.3:-35061238 | None:intergenic |
| CAAGACCGTGTCAGTGGACT+AGG | 0.327708 | 3.3:+35061165 | MS.gene019117:CDS |
| GGCAAATGATTGGTATGAAT+TGG | 0.347033 | 3.3:-35063062 | None:intergenic |
| TTAGACACGATTGCCTGTTT+GGG | 0.351618 | 3.3:-35062398 | None:intergenic |
| TAAAACCCCTGCACAGCTTA+TGG | 0.357510 | 3.3:+35060715 | MS.gene019117:CDS |
| ATAGTAAACCTACCATTAAC+TGG | 0.358625 | 3.3:-35061633 | None:intergenic |
| TTTGGTGTTACGTGTCTATA+AGG | 0.369262 | 3.3:-35061417 | None:intergenic |
| TTATATCCTGTAGGATTTAA+GGG | 0.371721 | 3.3:-35061453 | None:intergenic |
| ACCTTCCATTTGTAAATCTT+GGG | 0.373107 | 3.3:-35062952 | None:intergenic |
| CTGTTTGGGGCAGAGTCATC+TGG | 0.373119 | 3.3:-35062384 | None:intergenic |
| CCCTGCACAGCTTATGGCCT+TGG | 0.376056 | 3.3:+35060721 | MS.gene019117:CDS |
| CCATGACTCTCAACCTCTTT+GGG | 0.381347 | 3.3:-35061237 | None:intergenic |
| CACTCAACCCATGGAGGAAC+TGG | 0.387048 | 3.3:-35064169 | None:intergenic |
| GAATTATGCATTGTATTTGA+AGG | 0.397343 | 3.3:-35063335 | None:intergenic |
| AGGACAGGATCCATATGATA+TGG | 0.397603 | 3.3:+35061392 | MS.gene019117:CDS |
| ATGCATTGTATTTGAAGGTT+CGG | 0.397770 | 3.3:-35063330 | None:intergenic |
| CTCGTGATAGCGATGATCAC+TGG | 0.417810 | 3.3:-35063216 | None:intergenic |
| GGGGAAGCACCTTCTTATAA+TGG | 0.419829 | 3.3:+35063125 | MS.gene019117:CDS |
| CTATAAGGCTCCATATCATA+TGG | 0.423768 | 3.3:-35061402 | None:intergenic |
| GATTTGAACGTAGACTCAAC+TGG | 0.424081 | 3.3:+35063104 | MS.gene019117:CDS |
| GCATGGTGAGTACAGGTGTT+TGG | 0.431803 | 3.3:+35061212 | MS.gene019117:CDS |
| TCCAAGGCCATAAGCTGTGC+AGG | 0.439233 | 3.3:-35060722 | None:intergenic |
| TTGTTCTTTGTTGAATAAGC+TGG | 0.441613 | 3.3:-35063025 | None:intergenic |
| TTGCAGGAAGAAAAGTTCAA+TGG | 0.441671 | 3.3:+35063510 | MS.gene019117:intron |
| TGCAGGAAGAAAAGTTCAAT+GGG | 0.443717 | 3.3:+35063511 | MS.gene019117:intron |
| AAAGGTGAAGTATGTGCTAA+TGG | 0.444429 | 3.3:+35061114 | MS.gene019117:CDS |
| CAGATGACTCTGCCCCAAAC+AGG | 0.449852 | 3.3:+35062385 | MS.gene019117:CDS |
| GTTCTTGCCAGGCAAATGAT+TGG | 0.454021 | 3.3:-35063072 | None:intergenic |
| TATCATATGGATCCTGTCCT+TGG | 0.459663 | 3.3:-35061389 | None:intergenic |
| TCAACTTTCATTTCCTCTGT+GGG | 0.466436 | 3.3:-35061009 | None:intergenic |
| AAAGAGAGGGGTTTGCATCA+TGG | 0.471242 | 3.3:-35062353 | None:intergenic |
| ACAAATGGAAGGTGGTGACT+TGG | 0.472755 | 3.3:+35062962 | MS.gene019117:CDS |
| TATAGACACGTAACACCAAA+TGG | 0.476346 | 3.3:+35061420 | MS.gene019117:CDS |
| TCAAAATCTACATTAAGTAG+TGG | 0.476441 | 3.3:-35061570 | None:intergenic |
| AAGGGTGGAAGAGCTCCATT+TGG | 0.483958 | 3.3:-35061435 | None:intergenic |
| ACTGCTGTTAAGAATCGGTT+AGG | 0.488521 | 3.3:+35061525 | MS.gene019117:CDS |
| CTTCCACCCTTAAATCCTAC+AGG | 0.493600 | 3.3:+35061447 | MS.gene019117:CDS |
| CTACTACATGGCTACAATAA+CGG | 0.493623 | 3.3:+35063269 | MS.gene019117:CDS |
| GGCACTAGAAATCATAGAAT+AGG | 0.497964 | 3.3:+35063146 | MS.gene019117:CDS |
| CTATAACTGCTGTTAAGAAT+CGG | 0.502559 | 3.3:+35061520 | MS.gene019117:CDS |
| ATTCATACCAATCATTTGCC+TGG | 0.506282 | 3.3:+35063065 | MS.gene019117:CDS |
| GGATCTGACTTCATAATCGC+CGG | 0.509626 | 3.3:-35063245 | None:intergenic |
| TACAGAAAATGATAGTGAAA+CGG | 0.510234 | 3.3:+35061317 | MS.gene019117:CDS |
| TTTCTAGTGCCATTATAAGA+AGG | 0.512283 | 3.3:-35063134 | None:intergenic |
| CAAATGGAAGGTGGTGACTT+GGG | 0.512635 | 3.3:+35062963 | MS.gene019117:CDS |
| TCCACAGGAAAGTTCTTGCC+AGG | 0.512885 | 3.3:-35063083 | None:intergenic |
| CCTACAGGATATAAACCATC+AGG | 0.515416 | 3.3:+35061462 | MS.gene019117:CDS |
| TTCAACTTTCATTTCCTCTG+TGG | 0.515681 | 3.3:-35061010 | None:intergenic |
| CTATGGATTCTGAAGAAAGA+GGG | 0.519430 | 3.3:+35063366 | MS.gene019117:CDS |
| GCTGGCGGGATTTCTTATCC+TGG | 0.525159 | 3.3:-35063007 | None:intergenic |
| TGATGAAACCAGTTCCTCCA+TGG | 0.527407 | 3.3:+35064161 | MS.gene019117:CDS |
| GCACTAAGCATGGTGAGTAC+AGG | 0.530782 | 3.3:+35061205 | MS.gene019117:CDS |
| TGCAAAGATGAGCTACTCTC+AGG | 0.534507 | 3.3:-35061351 | None:intergenic |
| TTGACAGAAAAGCAAATCTC+GGG | 0.535331 | 3.3:+35061051 | MS.gene019117:CDS |
| GTTGACAGAAAAGCAAATCT+CGG | 0.536727 | 3.3:+35061050 | MS.gene019117:CDS |
| GTTTGAAATTCAAATGCCCC+TGG | 0.538643 | 3.3:-35061603 | None:intergenic |
| AAAGAATATCATGAGTCAGA+TGG | 0.539635 | 3.3:+35063549 | MS.gene019117:CDS |
| TCTTCTAATTGCAACTCCAT+CGG | 0.542711 | 3.3:-35060653 | None:intergenic |
| TCCCAAGATTTACAAATGGA+AGG | 0.543378 | 3.3:+35062951 | MS.gene019117:CDS |
| TGTTAACACAATACCTTCCA+TGG | 0.550566 | 3.3:-35059461 | None:intergenic |
| CAAAATCTACATTAAGTAGT+GGG | 0.551836 | 3.3:-35061569 | None:intergenic |
| GAGTCTACGTTCAAATCCAC+AGG | 0.553549 | 3.3:-35063098 | None:intergenic |
| TCTGGAGAATTTGAAAGAGA+GGG | 0.555797 | 3.3:-35062366 | None:intergenic |
| AAGTTCCCAAGATTTACAAA+TGG | 0.561294 | 3.3:+35062947 | MS.gene019117:CDS |
| CCAAGGCCATAAGCTGTGCA+GGG | 0.562140 | 3.3:-35060721 | None:intergenic |
| TCTATGGATTCTGAAGAAAG+AGG | 0.562753 | 3.3:+35063365 | MS.gene019117:CDS |
| ACGGTATTATCTCCAAGGAC+AGG | 0.562785 | 3.3:+35061377 | MS.gene019117:CDS |
| TTCTTTGTTGAATAAGCTGG+CGG | 0.564732 | 3.3:-35063022 | None:intergenic |
| AAGAAAGAGGGCTTTCTGAA+AGG | 0.565873 | 3.3:+35063378 | MS.gene019117:CDS |
| GTAATGTGAAGAATGTACTA+AGG | 0.567502 | 3.3:+35063291 | MS.gene019117:CDS |
| AAGAGGGCTTTCTGAAAGGA+TGG | 0.567622 | 3.3:+35063382 | MS.gene019117:CDS |
| CTGGAGAATTTGAAAGAGAG+GGG | 0.568291 | 3.3:-35062365 | None:intergenic |
| CAACTTTCATTTCCTCTGTG+GGG | 0.569792 | 3.3:-35061008 | None:intergenic |
| ATCTGGAGAATTTGAAAGAG+AGG | 0.570870 | 3.3:-35062367 | None:intergenic |
| CTCACCACAGTTTCTCTCAA+AGG | 0.571956 | 3.3:-35063582 | None:intergenic |
| GCCTGGCAAGAACTTTCCTG+TGG | 0.575905 | 3.3:+35063082 | MS.gene019117:CDS |
| TCGTGATAGCGATGATCACT+GGG | 0.576108 | 3.3:-35063215 | None:intergenic |
| CCCAAAGAGGTTGAGAGTCA+TGG | 0.576918 | 3.3:+35061237 | MS.gene019117:CDS |
| AGTCATCAGCACTCAACCCA+TGG | 0.576920 | 3.3:-35064178 | None:intergenic |
| CAAGAACGGTATTATCTCCA+AGG | 0.580779 | 3.3:+35061372 | MS.gene019117:CDS |
| AGAAGACAATACAACCTCTA+CGG | 0.585953 | 3.3:+35060670 | MS.gene019117:CDS |
| CTGTTAAGAATCGGTTAGGA+AGG | 0.588262 | 3.3:+35061529 | MS.gene019117:CDS |
| GATGAAACCAGTTCCTCCAT+GGG | 0.588465 | 3.3:+35064162 | MS.gene019117:CDS |
| CAGGTGTTTGGATCCCAAAG+AGG | 0.589068 | 3.3:+35061224 | MS.gene019117:CDS |
| GTAGCTCATCTTTGCAAGAA+CGG | 0.592344 | 3.3:+35061358 | MS.gene019117:CDS |
| ATTTGAACGTAGACTCAACT+GGG | 0.593202 | 3.3:+35063105 | MS.gene019117:CDS |
| AAAGATAAGAGACTGATGAA+AGG | 0.596779 | 3.3:+35061096 | MS.gene019117:CDS |
| TAGACACGATTGCCTGTTTG+GGG | 0.604461 | 3.3:-35062397 | None:intergenic |
| CATAGAATAGGCACTAAGCA+TGG | 0.605322 | 3.3:+35063158 | MS.gene019117:CDS |
| AAGTCAGATCCACTACTACA+TGG | 0.608206 | 3.3:+35063257 | MS.gene019117:CDS |
| CCTGATGGTTTATATCCTGT+AGG | 0.609287 | 3.3:-35061462 | None:intergenic |
| GATCTGACTTCATAATCGCC+GGG | 0.612811 | 3.3:-35063244 | None:intergenic |
| CAGAAAAGCAAATCTCGGGA+TGG | 0.614233 | 3.3:+35061055 | MS.gene019117:CDS |
| CTGGAAATCAGAATCATGCA+TGG | 0.616257 | 3.3:-35062988 | None:intergenic |
| CAAGATTTACAAATGGAAGG+TGG | 0.616333 | 3.3:+35062954 | MS.gene019117:CDS |
| TTATTGTAGCCATGTAGTAG+TGG | 0.623018 | 3.3:-35063266 | None:intergenic |
| GCTTTCTGAAAGGATGGCAA+AGG | 0.632256 | 3.3:+35063388 | MS.gene019117:CDS |
| TCATGTGGAAGCACTAAGCA+TGG | 0.632594 | 3.3:+35061195 | MS.gene019117:CDS |
| CAAGGCCATAAGCTGTGCAG+GGG | 0.634076 | 3.3:-35060720 | None:intergenic |
| GAAGAAAGAGATAGAGCATG+CGG | 0.640968 | 3.3:+35061497 | MS.gene019117:CDS |
| TCATCCTCACTAAAGCTAGA+CGG | 0.642459 | 3.3:-35064132 | None:intergenic |
| AAGACCGTGTCAGTGGACTA+GGG | 0.645299 | 3.3:+35061166 | MS.gene019117:CDS |
| GTTGTTCAAGACCGTGTCAG+TGG | 0.646069 | 3.3:+35061159 | MS.gene019117:CDS |
| TCTTTGTTGAATAAGCTGGC+GGG | 0.646615 | 3.3:-35063021 | None:intergenic |
| GTGAAGAATGTACTAAGGTG+TGG | 0.652203 | 3.3:+35063296 | MS.gene019117:CDS |
| GGACGACAAGATCGATCAAG+TGG | 0.652409 | 3.3:+35061135 | MS.gene019117:CDS |
| TGAAATTCAAATGCCCCTGG+AGG | 0.656858 | 3.3:-35061600 | None:intergenic |
| CTTGCCCTAGTCCACTGACA+CGG | 0.661193 | 3.3:-35061170 | None:intergenic |
| GGACTAGGGCAAGATTCATG+TGG | 0.663027 | 3.3:+35061180 | MS.gene019117:CDS |
| TCGCTATCACGAGAATAACC+CGG | 0.675003 | 3.3:+35063226 | MS.gene019117:CDS |
| ATGATAATGTAGATCTGCTG+TGG | 0.688279 | 3.3:+35064104 | MS.gene019117:intron |
| TATCCTGTAGGATTTAAGGG+TGG | 0.688920 | 3.3:-35061450 | None:intergenic |
| CATCAGCACTCAACCCATGG+AGG | 0.702201 | 3.3:-35064175 | None:intergenic |
| ATTGCCTTTGAGAGAAACTG+TGG | 0.709138 | 3.3:+35063578 | MS.gene019117:CDS |
| GTTGCCGTCTAGCTTTAGTG+AGG | 0.710155 | 3.3:+35064128 | MS.gene019117:CDS |
| TTGAACCAAGGAAAACTCAG+AGG | 0.722923 | 3.3:+35063997 | MS.gene019117:CDS |
| ATGTTGCTGAGATTGAACCA+AGG | 0.745142 | 3.3:+35063985 | MS.gene019117:CDS |
| TTTGAACGTAGACTCAACTG+GGG | 0.792830 | 3.3:+35063106 | MS.gene019117:CDS |
| AGAGCACAAATACCCCACAG+AGG | 0.803915 | 3.3:+35060996 | MS.gene019117:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGCTTTTTTTTTTTTTTTTT+TGG | + | chr3.3:35059786-35059805 | MS.gene019117:intron | 10.0% |
| !! | AAACAAAACAATATTTCTTT+GGG | - | chr3.3:35062034-35062053 | None:intergenic | 15.0% |
| !! | AATAAGATGATGAAAAATAA+AGG | - | chr3.3:35062456-35062475 | None:intergenic | 15.0% |
| !! | AATTAACATTACCTAATAAA+AGG | - | chr3.3:35059763-35059782 | None:intergenic | 15.0% |
| !!! | ATTTATGTTTTGATTATTTG+AGG | + | chr3.3:35061805-35061824 | MS.gene019117:intron | 15.0% |
| !!! | TAACTTATGTAAAGTATTTT+TGG | + | chr3.3:35060201-35060220 | MS.gene019117:intron | 15.0% |
| !!! | TTGATAATTTGATTTTCTAT+CGG | + | chr3.3:35063639-35063658 | MS.gene019117:intron | 15.0% |
| !!! | TTTGAAATTTTCACTATTAA+TGG | + | chr3.3:35061861-35061880 | MS.gene019117:intron | 15.0% |
| !!! | TTTTATAGTATAGTAAAATG+CGG | + | chr3.3:35060813-35060832 | MS.gene019117:intron | 15.0% |
| !! | AACATGTTAAAAATTCATTC+AGG | - | chr3.3:35061832-35061851 | None:intergenic | 20.0% |
| !! | AATAGTGAAAATTTCAAACA+AGG | - | chr3.3:35061859-35061878 | None:intergenic | 20.0% |
| !! | AGAAAAAACAAGTTCAAATT+AGG | - | chr3.3:35059710-35059729 | None:intergenic | 20.0% |
| !! | ATAATCAAAACATAAATGCA+AGG | - | chr3.3:35061802-35061821 | None:intergenic | 20.0% |
| !! | ATGATACATTAATCATAAGT+AGG | + | chr3.3:35062485-35062504 | MS.gene019117:intron | 20.0% |
| !! | GAAAAAACAAGTTCAAATTA+GGG | - | chr3.3:35059709-35059728 | None:intergenic | 20.0% |
| !! | GAAACAAAACAATATTTCTT+TGG | - | chr3.3:35062035-35062054 | None:intergenic | 20.0% |
| !! | GTTAATGTTAAGAAAAGATA+AGG | - | chr3.3:35063904-35063923 | None:intergenic | 20.0% |
| !! | TCAACAACTTAAGATTATTA+GGG | + | chr3.3:35060390-35060409 | MS.gene019117:intron | 20.0% |
| !! | TTCTCAAAACAAATGAATTA+TGG | + | chr3.3:35062064-35062083 | MS.gene019117:intron | 20.0% |
| !!! | CATACACATTTTTTCTTTTT+TGG | - | chr3.3:35060178-35060197 | None:intergenic | 20.0% |
| !!! | CTTGTTTTTTCTTTTGTTAT+TGG | + | chr3.3:35059718-35059737 | MS.gene019117:intron | 20.0% |
| !!! | TTTTCTTAACATTAACACTT+AGG | + | chr3.3:35063908-35063927 | MS.gene019117:intron | 20.0% |
| ! | AAAAGAATTTCATTCTTAGC+TGG | - | chr3.3:35060335-35060354 | None:intergenic | 25.0% |
| ! | AATTGAAATTCATGCTGTTA+AGG | - | chr3.3:35064084-35064103 | None:intergenic | 25.0% |
| ! | ATGTATATGAGATAAATCCA+AGG | + | chr3.3:35059893-35059912 | MS.gene019117:intron | 25.0% |
| ! | ATTCGAATCAGTTTAATGTT+GGG | - | chr3.3:35060558-35060577 | None:intergenic | 25.0% |
| ! | CAAAATCTACATTAAGTAGT+GGG | - | chr3.3:35061572-35061591 | None:intergenic | 25.0% |
| ! | CAACAACTTAAGATTATTAG+GGG | + | chr3.3:35060391-35060410 | MS.gene019117:intron | 25.0% |
| ! | CTCAACAACTTAAGATTATT+AGG | + | chr3.3:35060389-35060408 | MS.gene019117:intron | 25.0% |
| ! | GAATTATGCATTGTATTTGA+AGG | - | chr3.3:35063338-35063357 | None:intergenic | 25.0% |
| ! | GTAGAATTATTGTCAAATAG+CGG | - | chr3.3:35063731-35063750 | None:intergenic | 25.0% |
| ! | TAAAATTACATATGTTCGAG+AGG | + | chr3.3:35061888-35061907 | MS.gene019117:intron | 25.0% |
| ! | TACTGAAAAGAAATTGTGAA+AGG | - | chr3.3:35060458-35060477 | None:intergenic | 25.0% |
| ! | TCAAAATCTACATTAAGTAG+TGG | - | chr3.3:35061573-35061592 | None:intergenic | 25.0% |
| ! | TGTATATGAGATAAATCCAA+GGG | + | chr3.3:35059894-35059913 | MS.gene019117:intron | 25.0% |
| ! | TTATATCCTGTAGGATTTAA+GGG | - | chr3.3:35061456-35061475 | None:intergenic | 25.0% |
| ! | TTGACAATAATTCTACCAAT+TGG | + | chr3.3:35063735-35063754 | MS.gene019117:intron | 25.0% |
| ! | TTTATATCCTGTAGGATTTA+AGG | - | chr3.3:35061457-35061476 | None:intergenic | 25.0% |
| !! | AATATGCTTCTTTTGTCATA+TGG | + | chr3.3:35060909-35060928 | MS.gene019117:intron | 25.0% |
| !! | ATTTTGTCATAACTTATGTG+AGG | + | chr3.3:35062201-35062220 | MS.gene019117:intron | 25.0% |
| !! | GCCTTGGAAAATTTTTATAA+CGG | + | chr3.3:35060737-35060756 | MS.gene019117:CDS | 25.0% |
| !! | TACAGAAAATGATAGTGAAA+CGG | + | chr3.3:35061317-35061336 | MS.gene019117:CDS | 25.0% |
| !! | TCAACAAAGAACAAATTTTC+AGG | + | chr3.3:35063034-35063053 | MS.gene019117:CDS | 25.0% |
| !! | TTCTTTCAAATCACATGTTT+TGG | + | chr3.3:35059837-35059856 | MS.gene019117:intron | 25.0% |
| !! | TTTTGTCATAACTTATGTGA+GGG | + | chr3.3:35062202-35062221 | MS.gene019117:intron | 25.0% |
| !!! | AATCACATGTTTTGGTTTTA+TGG | + | chr3.3:35059845-35059864 | MS.gene019117:intron | 25.0% |
| !!! | AATCACTTTTGAATCCAAAT+TGG | + | chr3.3:35062733-35062752 | MS.gene019117:intron | 25.0% |
| !!! | AGAAGCATATTTTTAAACTG+CGG | - | chr3.3:35060900-35060919 | None:intergenic | 25.0% |
| !!! | ATCACTTTTGAATCCAAATT+GGG | + | chr3.3:35062734-35062753 | MS.gene019117:intron | 25.0% |
| !!! | CTTTTCATGGTTTTAAATAG+TGG | + | chr3.3:35060771-35060790 | MS.gene019117:intron | 25.0% |
| !!! | TAATGGTGGATTATTTTTCA+GGG | + | chr3.3:35059569-35059588 | MS.gene019117:intron | 25.0% |
| !!! | TGTAAAGTATTTTTGGTGAA+TGG | + | chr3.3:35060208-35060227 | MS.gene019117:intron | 25.0% |
| !!! | TTCACTTTTAAATATCCTGA+TGG | - | chr3.3:35061480-35061499 | None:intergenic | 25.0% |
| AAAGAATATCATGAGTCAGA+TGG | + | chr3.3:35063549-35063568 | MS.gene019117:CDS | 30.0% | |
| AAAGATAAGAGACTGATGAA+AGG | + | chr3.3:35061096-35061115 | MS.gene019117:CDS | 30.0% | |
| AAGACACATTGTCAAAAAGA+TGG | - | chr3.3:35062128-35062147 | None:intergenic | 30.0% | |
| AAGTTCCCAAGATTTACAAA+TGG | + | chr3.3:35062947-35062966 | MS.gene019117:CDS | 30.0% | |
| AATCAAGATATACACAAGCA+TGG | - | chr3.3:35063874-35063893 | None:intergenic | 30.0% | |
| ACCTAAAAACCGTTATATTG+CGG | + | chr3.3:35060867-35060886 | MS.gene019117:intron | 30.0% | |
| ACCTTCCATTTGTAAATCTT+GGG | - | chr3.3:35062955-35062974 | None:intergenic | 30.0% | |
| ACGTTTATAAGTTCAGAACT+TGG | - | chr3.3:35061942-35061961 | None:intergenic | 30.0% | |
| ACTACCAAAAAACAATCCTA+GGG | + | chr3.3:35059969-35059988 | MS.gene019117:intron | 30.0% | |
| AGACACATTGTCAAAAAGAT+GGG | - | chr3.3:35062127-35062146 | None:intergenic | 30.0% | |
| ATAGTAAACCTACCATTAAC+TGG | - | chr3.3:35061636-35061655 | None:intergenic | 30.0% | |
| ATATACACAAGCATGGAATA+TGG | - | chr3.3:35063867-35063886 | None:intergenic | 30.0% | |
| ATGAATTATGGCTGTGAAAA+TGG | + | chr3.3:35062076-35062095 | MS.gene019117:intron | 30.0% | |
| ATGCATTGTATTTGAAGGTT+CGG | - | chr3.3:35063333-35063352 | None:intergenic | 30.0% | |
| CAATGGTAACATTAAAGATC+AGG | - | chr3.3:35062518-35062537 | None:intergenic | 30.0% | |
| CAGAGACAATGCATAATATA+TGG | + | chr3.3:35059921-35059940 | MS.gene019117:intron | 30.0% | |
| CTATAACTGCTGTTAAGAAT+CGG | + | chr3.3:35061520-35061539 | MS.gene019117:CDS | 30.0% | |
| CTGATCTTATGAATATGCTT+TGG | + | chr3.3:35062320-35062339 | MS.gene019117:intron | 30.0% | |
| GACAATGCATAATATATGGA+AGG | + | chr3.3:35059925-35059944 | MS.gene019117:intron | 30.0% | |
| GATGACTTAACATGTATACT+TGG | + | chr3.3:35063478-35063497 | MS.gene019117:intron | 30.0% | |
| GATTCGAATCAGTTTAATGT+TGG | - | chr3.3:35060559-35060578 | None:intergenic | 30.0% | |
| GCATAATTCTCGAATTTCTA+TGG | + | chr3.3:35063349-35063368 | MS.gene019117:CDS | 30.0% | |
| GTAATGTGAAGAATGTACTA+AGG | + | chr3.3:35063291-35063310 | MS.gene019117:CDS | 30.0% | |
| GTATATGAGATAAATCCAAG+GGG | + | chr3.3:35059895-35059914 | MS.gene019117:intron | 30.0% | |
| TATACACAAGCATGGAATAT+GGG | - | chr3.3:35063866-35063885 | None:intergenic | 30.0% | |
| TATATGAGATAAATCCAAGG+GGG | + | chr3.3:35059896-35059915 | MS.gene019117:intron | 30.0% | |
| TCTTTATCAGATGATGCTAT+GGG | + | chr3.3:35061989-35062008 | MS.gene019117:intron | 30.0% | |
| TGCAATCAGATAATAGATCA+AGG | - | chr3.3:35062264-35062283 | None:intergenic | 30.0% | |
| TGCATAATATATGGAAGGTT+CGG | + | chr3.3:35059930-35059949 | MS.gene019117:intron | 30.0% | |
| TTGAACGGGACTTAAAAAAT+TGG | - | chr3.3:35061674-35061693 | None:intergenic | 30.0% | |
| TTGTTCTTTGTTGAATAAGC+TGG | - | chr3.3:35063028-35063047 | None:intergenic | 30.0% | |
| TTTGCTACCTTATAGTCATA+TGG | + | chr3.3:35063787-35063806 | MS.gene019117:intron | 30.0% | |
| ! | AATCTTAAGTTGTTGAGAAG+TGG | - | chr3.3:35060386-35060405 | None:intergenic | 30.0% |
| ! | AGAAAGCACAAGTATATTTG+TGG | - | chr3.3:35063415-35063434 | None:intergenic | 30.0% |
| ! | CACTATCATTTTCTGTACAA+TGG | - | chr3.3:35061314-35061333 | None:intergenic | 30.0% |
| ! | GCCGTTATAAAAATTTTCCA+AGG | - | chr3.3:35060741-35060760 | None:intergenic | 30.0% |
| ! | TCATGCATTGTTTGCATTTT+GGG | + | chr3.3:35059535-35059554 | MS.gene019117:intron | 30.0% |
| ! | TCTGTATGTTGCCTTTTATT+AGG | + | chr3.3:35059749-35059768 | MS.gene019117:intron | 30.0% |
| ! | TTCATGCATTGTTTGCATTT+TGG | + | chr3.3:35059534-35059553 | MS.gene019117:intron | 30.0% |
| ! | TTTCTAGTGCCATTATAAGA+AGG | - | chr3.3:35063137-35063156 | None:intergenic | 30.0% |
| ! | TTTGGGGAAGATTTTTGTAA+TGG | + | chr3.3:35059552-35059571 | MS.gene019117:intron | 30.0% |
| !! | ATTTTGATACAATTCCTCCA+GGG | + | chr3.3:35061586-35061605 | MS.gene019117:CDS | 30.0% |
| !! | TTTACTATTTTTCTCCGTAG+AGG | - | chr3.3:35060687-35060706 | None:intergenic | 30.0% |
| !!! | ATGGTTTTAAATAGTGGTTG+CGG | + | chr3.3:35060777-35060796 | MS.gene019117:intron | 30.0% |
| !!! | CTTAACTTGTGCTTTTCTTT+TGG | + | chr3.3:35060621-35060640 | MS.gene019117:intron | 30.0% |
| !!! | CTTTTTTGGAAACTCATATC+CGG | - | chr3.3:35060164-35060183 | None:intergenic | 30.0% |
| !!! | GTAATGGTGGATTATTTTTC+AGG | + | chr3.3:35059568-35059587 | MS.gene019117:intron | 30.0% |
| !!! | TGCTATGGGTTTTTTTTTGA+AGG | + | chr3.3:35062003-35062022 | MS.gene019117:intron | 30.0% |
| AAAGGTGAAGTATGTGCTAA+TGG | + | chr3.3:35061114-35061133 | MS.gene019117:CDS | 35.0% | |
| ACTTTGCTCTGACTTCAATT+GGG | + | chr3.3:35060086-35060105 | MS.gene019117:intron | 35.0% | |
| AGAAGACAATACAACCTCTA+CGG | + | chr3.3:35060670-35060689 | MS.gene019117:CDS | 35.0% | |
| AGTCTACATAGACTCATGAA+AGG | - | chr3.3:35061765-35061784 | None:intergenic | 35.0% | |
| ATAAACGTTGTAGCTTGACT+TGG | + | chr3.3:35061954-35061973 | MS.gene019117:intron | 35.0% | |
| ATACACAAGCATGGAATATG+GGG | - | chr3.3:35063865-35063884 | None:intergenic | 35.0% | |
| ATCTGGAGAATTTGAAAGAG+AGG | - | chr3.3:35062370-35062389 | None:intergenic | 35.0% | |
| ATTCATACCAATCATTTGCC+TGG | + | chr3.3:35063065-35063084 | MS.gene019117:CDS | 35.0% | |
| ATTGTGAGGGTAGAAAGAAA+TGG | + | chr3.3:35060246-35060265 | MS.gene019117:intron | 35.0% | |
| ATTTGAACGTAGACTCAACT+GGG | + | chr3.3:35063105-35063124 | MS.gene019117:CDS | 35.0% | |
| CAAACTGCAAATCCAGTTAA+TGG | + | chr3.3:35061621-35061640 | MS.gene019117:CDS | 35.0% | |
| CAACTTAAGATTATTAGGGG+AGG | + | chr3.3:35060394-35060413 | MS.gene019117:intron | 35.0% | |
| CAAGATTTACAAATGGAAGG+TGG | + | chr3.3:35062954-35062973 | MS.gene019117:CDS | 35.0% | |
| CACCTTCCATTTGTAAATCT+TGG | - | chr3.3:35062956-35062975 | None:intergenic | 35.0% | |
| CACTACCAAAAAACAATCCT+AGG | + | chr3.3:35059968-35059987 | MS.gene019117:intron | 35.0% | |
| CACTGCTAAATAATAGATCG+CGG | + | chr3.3:35062597-35062616 | MS.gene019117:intron | 35.0% | |
| CATAATATATGGAAGGTTCG+GGG | + | chr3.3:35059932-35059951 | MS.gene019117:intron | 35.0% | |
| CATATCTCTGCAAATACGTA+TGG | - | chr3.3:35062908-35062927 | None:intergenic | 35.0% | |
| CTACCAAAAAACAATCCTAG+GGG | + | chr3.3:35059970-35059989 | MS.gene019117:intron | 35.0% | |
| CTACTACATGGCTACAATAA+CGG | + | chr3.3:35063269-35063288 | MS.gene019117:CDS | 35.0% | |
| CTATAAGGCTCCATATCATA+TGG | - | chr3.3:35061405-35061424 | None:intergenic | 35.0% | |
| CTCTTTATCAGATGATGCTA+TGG | + | chr3.3:35061988-35062007 | MS.gene019117:intron | 35.0% | |
| GCATAACTTACTTTCATCTG+TGG | + | chr3.3:35063613-35063632 | MS.gene019117:intron | 35.0% | |
| GCATAATATATGGAAGGTTC+GGG | + | chr3.3:35059931-35059950 | MS.gene019117:intron | 35.0% | |
| GCATATTCATAAGATCAGAG+AGG | - | chr3.3:35062318-35062337 | None:intergenic | 35.0% | |
| GGCAAATGATTGGTATGAAT+TGG | - | chr3.3:35063065-35063084 | None:intergenic | 35.0% | |
| GGCACTAGAAATCATAGAAT+AGG | + | chr3.3:35063146-35063165 | MS.gene019117:CDS | 35.0% | |
| GTCTTGCAAAGCTAATTGAA+CGG | - | chr3.3:35061689-35061708 | None:intergenic | 35.0% | |
| GTTAAGTACGCATGTTAGAA+TGG | - | chr3.3:35060607-35060626 | None:intergenic | 35.0% | |
| GTTGACAGAAAAGCAAATCT+CGG | + | chr3.3:35061050-35061069 | MS.gene019117:CDS | 35.0% | |
| TACCAAAAAACAATCCTAGG+GGG | + | chr3.3:35059971-35059990 | MS.gene019117:intron | 35.0% | |
| TATAGACACGTAACACCAAA+TGG | + | chr3.3:35061420-35061439 | MS.gene019117:CDS | 35.0% | |
| TCAACTTTCATTTCCTCTGT+GGG | - | chr3.3:35061012-35061031 | None:intergenic | 35.0% | |
| TCAAGAACTAAAGCTTAGCA+AGG | - | chr3.3:35060950-35060969 | None:intergenic | 35.0% | |
| TCCCAAGATTTACAAATGGA+AGG | + | chr3.3:35062951-35062970 | MS.gene019117:CDS | 35.0% | |
| TCTGGAGAATTTGAAAGAGA+GGG | - | chr3.3:35062369-35062388 | None:intergenic | 35.0% | |
| TCTTCTAATTGCAACTCCAT+CGG | - | chr3.3:35060656-35060675 | None:intergenic | 35.0% | |
| TCTTGCAAAGCTAATTGAAC+GGG | - | chr3.3:35061688-35061707 | None:intergenic | 35.0% | |
| TGATTCGTGATTGACAACAA+TGG | - | chr3.3:35062535-35062554 | None:intergenic | 35.0% | |
| TGCAGGAAGAAAAGTTCAAT+GGG | + | chr3.3:35063511-35063530 | MS.gene019117:intron | 35.0% | |
| TGTAGCACCATATGACTATA+AGG | - | chr3.3:35063797-35063816 | None:intergenic | 35.0% | |
| TGTTGTAGCACTGTTTATAG+TGG | - | chr3.3:35063708-35063727 | None:intergenic | 35.0% | |
| TTATTGTAGCCATGTAGTAG+TGG | - | chr3.3:35063269-35063288 | None:intergenic | 35.0% | |
| TTCAACTTTCATTTCCTCTG+TGG | - | chr3.3:35061013-35061032 | None:intergenic | 35.0% | |
| TTCTACCAATTGGTGTATCA+CGG | + | chr3.3:35063745-35063764 | MS.gene019117:intron | 35.0% | |
| TTCTGCTTCTAGATCAGAAA+AGG | + | chr3.3:35060498-35060517 | MS.gene019117:intron | 35.0% | |
| TTCTTTGTTGAATAAGCTGG+CGG | - | chr3.3:35063025-35063044 | None:intergenic | 35.0% | |
| TTGACAGAAAAGCAAATCTC+GGG | + | chr3.3:35061051-35061070 | MS.gene019117:CDS | 35.0% | |
| TTGCAGGAAGAAAAGTTCAA+TGG | + | chr3.3:35063510-35063529 | MS.gene019117:intron | 35.0% | |
| TTTGTGAAGAAGGATTGTGA+GGG | + | chr3.3:35060233-35060252 | MS.gene019117:intron | 35.0% | |
| ! | AGACTAGTTATATCTTCTGC+AGG | + | chr3.3:35061705-35061724 | MS.gene019117:intron | 35.0% |
| ! | ATGATAATGTAGATCTGCTG+TGG | + | chr3.3:35064104-35064123 | MS.gene019117:intron | 35.0% |
| ! | CATGCATTGTTTGCATTTTG+GGG | + | chr3.3:35059536-35059555 | MS.gene019117:intron | 35.0% |
| ! | CTATGGATTCTGAAGAAAGA+GGG | + | chr3.3:35063366-35063385 | MS.gene019117:CDS | 35.0% |
| ! | CTTTTGAATCCAAATTGGGT+TGG | + | chr3.3:35062738-35062757 | MS.gene019117:intron | 35.0% |
| ! | GCTTCTTTTGTCATATGGAT+AGG | + | chr3.3:35060914-35060933 | MS.gene019117:intron | 35.0% |
| ! | GTGAATGGTTTTTGTGAAGA+AGG | + | chr3.3:35060223-35060242 | MS.gene019117:intron | 35.0% |
| ! | TCTATGGATTCTGAAGAAAG+AGG | + | chr3.3:35063365-35063384 | MS.gene019117:CDS | 35.0% |
| ! | TGGACTAACACAAGTATTGT+TGG | - | chr3.3:35060055-35060074 | None:intergenic | 35.0% |
| ! | TTTTGATACAATTCCTCCAG+GGG | + | chr3.3:35061587-35061606 | MS.gene019117:CDS | 35.0% |
| ! | TTTTGTGAAGAAGGATTGTG+AGG | + | chr3.3:35060232-35060251 | MS.gene019117:intron | 35.0% |
| !! | GATTTTGATACAATTCCTCC+AGG | + | chr3.3:35061585-35061604 | MS.gene019117:CDS | 35.0% |
| !! | TTGCTAAGCTTTAGTTCTTG+AGG | + | chr3.3:35060949-35060968 | MS.gene019117:intron | 35.0% |
| !! | TTTGGTGTTACGTGTCTATA+AGG | - | chr3.3:35061420-35061439 | None:intergenic | 35.0% |
| !!! | CTAGGATTGTTTTTTGGTAG+TGG | - | chr3.3:35059970-35059989 | None:intergenic | 35.0% |
| !!! | TACTTGGTTGCATTTTTTGC+AGG | + | chr3.3:35063494-35063513 | MS.gene019117:intron | 35.0% |
| AAAAAACAATCCTAGGGGGT+TGG | + | chr3.3:35059975-35059994 | MS.gene019117:intron | 40.0% | |
| AAGAAAGAGGGCTTTCTGAA+AGG | + | chr3.3:35063378-35063397 | MS.gene019117:CDS | 40.0% | |
| AAGTCAGATCCACTACTACA+TGG | + | chr3.3:35063257-35063276 | MS.gene019117:CDS | 40.0% | |
| ACTGCTGTTAAGAATCGGTT+AGG | + | chr3.3:35061525-35061544 | MS.gene019117:CDS | 40.0% | |
| AGGACAGGATCCATATGATA+TGG | + | chr3.3:35061392-35061411 | MS.gene019117:CDS | 40.0% | |
| AGGATCTATCTCATTGAAGC+AGG | + | chr3.3:35060414-35060433 | MS.gene019117:intron | 40.0% | |
| ATAAGAAGCGACTAATCCGA+GGG | - | chr3.3:35060140-35060159 | None:intergenic | 40.0% | |
| ATGTTGCTGAGATTGAACCA+AGG | + | chr3.3:35063985-35064004 | MS.gene019117:CDS | 40.0% | |
| ATTGTGGTCGCAGAAAATAG+CGG | + | chr3.3:35063670-35063689 | MS.gene019117:intron | 40.0% | |
| CAAAACTAGCTCACCGAAAT+CGG | - | chr3.3:35062833-35062852 | None:intergenic | 40.0% | |
| CAACTTTCATTTCCTCTGTG+GGG | - | chr3.3:35061011-35061030 | None:intergenic | 40.0% | |
| CAAGAACGGTATTATCTCCA+AGG | + | chr3.3:35061372-35061391 | MS.gene019117:CDS | 40.0% | |
| CATAGAATAGGCACTAAGCA+TGG | + | chr3.3:35063158-35063177 | MS.gene019117:CDS | 40.0% | |
| CATGCATGATTCTGATTTCC+AGG | + | chr3.3:35062989-35063008 | MS.gene019117:CDS | 40.0% | |
| CCTACAGGATATAAACCATC+AGG | + | chr3.3:35061462-35061481 | MS.gene019117:CDS | 40.0% | |
| CCTGATGGTTTATATCCTGT+AGG | - | chr3.3:35061465-35061484 | None:intergenic | 40.0% | |
| CTGCAAATCCAGTTAATGGT+AGG | + | chr3.3:35061625-35061644 | MS.gene019117:intron | 40.0% | |
| CTGGAAATCAGAATCATGCA+TGG | - | chr3.3:35062991-35063010 | None:intergenic | 40.0% | |
| CTGGAGAATTTGAAAGAGAG+GGG | - | chr3.3:35062368-35062387 | None:intergenic | 40.0% | |
| CTGTTAAGAATCGGTTAGGA+AGG | + | chr3.3:35061529-35061548 | MS.gene019117:CDS | 40.0% | |
| GAAGAAAGAGATAGAGCATG+CGG | + | chr3.3:35061497-35061516 | MS.gene019117:CDS | 40.0% | |
| GACTTTGCTCTGACTTCAAT+TGG | + | chr3.3:35060085-35060104 | MS.gene019117:intron | 40.0% | |
| GAGCAAAGTCATGTATGAAC+TGG | - | chr3.3:35060075-35060094 | None:intergenic | 40.0% | |
| GATCAGAAAAGGCAGATTTC+TGG | + | chr3.3:35060509-35060528 | MS.gene019117:intron | 40.0% | |
| GATTTGAACGTAGACTCAAC+TGG | + | chr3.3:35063104-35063123 | MS.gene019117:CDS | 40.0% | |
| GTAGCTCATCTTTGCAAGAA+CGG | + | chr3.3:35061358-35061377 | MS.gene019117:CDS | 40.0% | |
| GTGAAGAATGTACTAAGGTG+TGG | + | chr3.3:35063296-35063315 | MS.gene019117:CDS | 40.0% | |
| TATCATATGGATCCTGTCCT+TGG | - | chr3.3:35061392-35061411 | None:intergenic | 40.0% | |
| TATCCTGTAGGATTTAAGGG+TGG | - | chr3.3:35061453-35061472 | None:intergenic | 40.0% | |
| TCATCCTCACTAAAGCTAGA+CGG | - | chr3.3:35064135-35064154 | None:intergenic | 40.0% | |
| TCTTTGTTGAATAAGCTGGC+GGG | - | chr3.3:35063024-35063043 | None:intergenic | 40.0% | |
| TTAGACACGATTGCCTGTTT+GGG | - | chr3.3:35062401-35062420 | None:intergenic | 40.0% | |
| TTGAACCAAGGAAAACTCAG+AGG | + | chr3.3:35063997-35064016 | MS.gene019117:CDS | 40.0% | |
| TTGTTCCGTGATACACCAAT+TGG | - | chr3.3:35063753-35063772 | None:intergenic | 40.0% | |
| TTTAGACACGATTGCCTGTT+TGG | - | chr3.3:35062402-35062421 | None:intergenic | 40.0% | |
| TTTGAACCTCAGACCTATAG+AGG | - | chr3.3:35060021-35060040 | None:intergenic | 40.0% | |
| TTTGAACGTAGACTCAACTG+GGG | + | chr3.3:35063106-35063125 | MS.gene019117:CDS | 40.0% | |
| ! | AATCTCATTGTGGACTAACG+GGG | - | chr3.3:35060114-35060133 | None:intergenic | 40.0% |
| ! | ATTGCCTTTGAGAGAAACTG+TGG | + | chr3.3:35063578-35063597 | MS.gene019117:CDS | 40.0% |
| ! | CAATCTCATTGTGGACTAAC+GGG | - | chr3.3:35060115-35060134 | None:intergenic | 40.0% |
| ! | CAATGTGTCTTCGCTTGTTT+TGG | + | chr3.3:35062137-35062156 | MS.gene019117:intron | 40.0% |
| ! | CCAATCTCATTGTGGACTAA+CGG | - | chr3.3:35060116-35060135 | None:intergenic | 40.0% |
| ! | GCCGCAATATAACGGTTTTT+AGG | - | chr3.3:35060871-35060890 | None:intergenic | 40.0% |
| ! | GGGGAAGATTTTTGTAATGG+TGG | + | chr3.3:35059555-35059574 | MS.gene019117:intron | 40.0% |
| ! | GTTTGAAATTCAAATGCCCC+TGG | - | chr3.3:35061606-35061625 | None:intergenic | 40.0% |
| ! | TGAAAGGAGCATGCATAACT+AGG | - | chr3.3:35060442-35060461 | None:intergenic | 40.0% |
| !! | TCTATCGGTGTTGTCAATTG+TGG | + | chr3.3:35063654-35063673 | MS.gene019117:intron | 40.0% |
| !!! | AACCCCCTAGGATTGTTTTT+TGG | - | chr3.3:35059976-35059995 | None:intergenic | 40.0% |
| !!! | CGGTTTTTAGGTATTCGCAA+TGG | - | chr3.3:35060859-35060878 | None:intergenic | 40.0% |
| !!! | CTTTTGGTTTTCAGAACCGA+TGG | + | chr3.3:35060637-35060656 | MS.gene019117:intron | 40.0% |
| !!! | GCACTAAGCATGGTTTTGAA+AGG | + | chr3.3:35063168-35063187 | MS.gene019117:CDS | 40.0% |
| !!! | GGAAGGTATTTTCTGGAAGA+TGG | + | chr3.3:35061546-35061565 | MS.gene019117:CDS | 40.0% |
| !!! | GGCAAGAGTACTTCTTTTCA+TGG | + | chr3.3:35060758-35060777 | MS.gene019117:intron | 40.0% |
| !!! | TCGGTTAGGAAGGTATTTTC+TGG | + | chr3.3:35061539-35061558 | MS.gene019117:CDS | 40.0% |
| !!! | TTGTTTTTTGGTAGTGGTCG+AGG | - | chr3.3:35059964-35059983 | None:intergenic | 40.0% |
| AAAGAGAGGGGTTTGCATCA+TGG | - | chr3.3:35062356-35062375 | None:intergenic | 45.0% | |
| AAGCATGGAATATGGGGAAC+GGG | - | chr3.3:35063859-35063878 | None:intergenic | 45.0% | |
| AATAGATCGCGGAACAAGAG+TGG | + | chr3.3:35062608-35062627 | MS.gene019117:intron | 45.0% | |
| ACAAATGGAAGGTGGTGACT+TGG | + | chr3.3:35062962-35062981 | MS.gene019117:CDS | 45.0% | |
| ACCATGACTCTCAACCTCTT+TGG | - | chr3.3:35061241-35061260 | None:intergenic | 45.0% | |
| ACGGTATTATCTCCAAGGAC+AGG | + | chr3.3:35061377-35061396 | MS.gene019117:CDS | 45.0% | |
| AGAGAAACTGTGGTGAGTCT+TGG | + | chr3.3:35063588-35063607 | MS.gene019117:intron | 45.0% | |
| ATTGAACCTGAGACCTTGAG+AGG | - | chr3.3:35062799-35062818 | None:intergenic | 45.0% | |
| CAAATGGAAGGTGGTGACTT+GGG | + | chr3.3:35062963-35062982 | MS.gene019117:CDS | 45.0% | |
| CAAGCATGGAATATGGGGAA+CGG | - | chr3.3:35063860-35063879 | None:intergenic | 45.0% | |
| CAGAAAAGCAAATCTCGGGA+TGG | + | chr3.3:35061055-35061074 | MS.gene019117:CDS | 45.0% | |
| CATAAGAAGCGACTAATCCG+AGG | - | chr3.3:35060141-35060160 | None:intergenic | 45.0% | |
| CCATGACTCTCAACCTCTTT+GGG | - | chr3.3:35061240-35061259 | None:intergenic | 45.0% | |
| CCGTTAGTCCACAATGAGAT+TGG | + | chr3.3:35060113-35060132 | MS.gene019117:intron | 45.0% | |
| CTCACCACAGTTTCTCTCAA+AGG | - | chr3.3:35063585-35063604 | None:intergenic | 45.0% | |
| CTTCCACCCTTAAATCCTAC+AGG | + | chr3.3:35061447-35061466 | MS.gene019117:CDS | 45.0% | |
| CTTGAGAGGATTACACTCCA+AGG | - | chr3.3:35062785-35062804 | None:intergenic | 45.0% | |
| CTTGGAGTGTAATCCTCTCA+AGG | + | chr3.3:35062783-35062802 | MS.gene019117:intron | 45.0% | |
| GAGTCTACGTTCAAATCCAC+AGG | - | chr3.3:35063101-35063120 | None:intergenic | 45.0% | |
| GATCTGACTTCATAATCGCC+GGG | - | chr3.3:35063247-35063266 | None:intergenic | 45.0% | |
| GATGAAACCAGTTCCTCCAT+GGG | + | chr3.3:35064162-35064181 | MS.gene019117:CDS | 45.0% | |
| GGATCTGACTTCATAATCGC+CGG | - | chr3.3:35063248-35063267 | None:intergenic | 45.0% | |
| GTAGAAAGAAATGGCTGGCA+TGG | + | chr3.3:35060255-35060274 | MS.gene019117:intron | 45.0% | |
| GTCAAAAAGATGGGCATGTG+TGG | - | chr3.3:35062118-35062137 | None:intergenic | 45.0% | |
| GTTCTTGCCAGGCAAATGAT+TGG | - | chr3.3:35063075-35063094 | None:intergenic | 45.0% | |
| TAAAACCCCTGCACAGCTTA+TGG | + | chr3.3:35060715-35060734 | MS.gene019117:CDS | 45.0% | |
| TAGACACGATTGCCTGTTTG+GGG | - | chr3.3:35062400-35062419 | None:intergenic | 45.0% | |
| TAGACTCATGAAAGGTCCGT+TGG | - | chr3.3:35061757-35061776 | None:intergenic | 45.0% | |
| TCGCTATCACGAGAATAACC+CGG | + | chr3.3:35063226-35063245 | MS.gene019117:CDS | 45.0% | |
| TGAAATTCAAATGCCCCTGG+AGG | - | chr3.3:35061603-35061622 | None:intergenic | 45.0% | |
| TGAGGGTAGAAAGAAATGGC+TGG | + | chr3.3:35060250-35060269 | MS.gene019117:intron | 45.0% | |
| TGATGAAACCAGTTCCTCCA+TGG | + | chr3.3:35064161-35064180 | MS.gene019117:CDS | 45.0% | |
| TGCAAAGATGAGCTACTCTC+AGG | - | chr3.3:35061354-35061373 | None:intergenic | 45.0% | |
| TGGCATCACAACAGCAATAG+CGG | - | chr3.3:35060839-35060858 | None:intergenic | 45.0% | |
| TGTAATCCTCTCAAGGTCTC+AGG | + | chr3.3:35062790-35062809 | MS.gene019117:intron | 45.0% | |
| ! | AAGAGGGCTTTCTGAAAGGA+TGG | + | chr3.3:35063382-35063401 | MS.gene019117:CDS | 45.0% |
| ! | ACAAGTATTGTTGGCACCTG+GGG | - | chr3.3:35060046-35060065 | None:intergenic | 45.0% |
| ! | ACACAAGTATTGTTGGCACC+TGG | - | chr3.3:35060048-35060067 | None:intergenic | 45.0% |
| ! | CACAAGTATTGTTGGCACCT+GGG | - | chr3.3:35060047-35060066 | None:intergenic | 45.0% |
| ! | GCTTTCTGAAAGGATGGCAA+AGG | + | chr3.3:35063388-35063407 | MS.gene019117:CDS | 45.0% |
| ! | TCGTGATAGCGATGATCACT+GGG | - | chr3.3:35063218-35063237 | None:intergenic | 45.0% |
| ! | TGTCACCTCTGAGTTTTCCT+TGG | - | chr3.3:35064005-35064024 | None:intergenic | 45.0% |
| !! | GGATTAGTCGCTTCTTATGC+CGG | + | chr3.3:35060142-35060161 | MS.gene019117:intron | 45.0% |
| !! | GGGGAAGCACCTTCTTATAA+TGG | + | chr3.3:35063125-35063144 | MS.gene019117:CDS | 45.0% |
| !! | TCATGTGGAAGCACTAAGCA+TGG | + | chr3.3:35061195-35061214 | MS.gene019117:CDS | 45.0% |
| !!! | CTAAATATTTATTTTATATT+TGG | - | chr3.3:35059664-35059683 | None:intergenic | 5.0% |
| !!! | TATTTAAAATATAATTTCTT+AGG | + | chr3.3:35059615-35059634 | MS.gene019117:intron | 5.0% |
| AAGGGTGGAAGAGCTCCATT+TGG | - | chr3.3:35061438-35061457 | None:intergenic | 50.0% | |
| AGAGCACAAATACCCCACAG+AGG | + | chr3.3:35060996-35061015 | MS.gene019117:intron | 50.0% | |
| CAGGTGTTTGGATCCCAAAG+AGG | + | chr3.3:35061224-35061243 | MS.gene019117:CDS | 50.0% | |
| CCCAAAGAGGTTGAGAGTCA+TGG | + | chr3.3:35061237-35061256 | MS.gene019117:CDS | 50.0% | |
| CTTGCTCCTCTATAGGTCTG+AGG | + | chr3.3:35060012-35060031 | MS.gene019117:intron | 50.0% | |
| GATTACACTCCAAGGTCCCA+AGG | - | chr3.3:35062777-35062796 | None:intergenic | 50.0% | |
| GATTGTTCGAGCTGCAGACA+AGG | + | chr3.3:35061910-35061929 | MS.gene019117:intron | 50.0% | |
| GCACTAAGCATGGTGAGTAC+AGG | + | chr3.3:35061205-35061224 | MS.gene019117:CDS | 50.0% | |
| GCATGGTGAGTACAGGTGTT+TGG | + | chr3.3:35061212-35061231 | MS.gene019117:CDS | 50.0% | |
| GGACGACAAGATCGATCAAG+TGG | + | chr3.3:35061135-35061154 | MS.gene019117:CDS | 50.0% | |
| GGACTAGGGCAAGATTCATG+TGG | + | chr3.3:35061180-35061199 | MS.gene019117:CDS | 50.0% | |
| GGTCTGCAGCCGCAATATAA+CGG | - | chr3.3:35060879-35060898 | None:intergenic | 50.0% | |
| GTCTCAGGTTCAATTCTCCC+TGG | + | chr3.3:35062805-35062824 | MS.gene019117:intron | 50.0% | |
| GTTGTTCAAGACCGTGTCAG+TGG | + | chr3.3:35061159-35061178 | MS.gene019117:CDS | 50.0% | |
| TCCACAGGAAAGTTCTTGCC+AGG | - | chr3.3:35063086-35063105 | None:intergenic | 50.0% | |
| ! | CAAGTATTGTTGGCACCTGG+GGG | - | chr3.3:35060045-35060064 | None:intergenic | 50.0% |
| ! | CCACAATGAGATTGGTCCCT+CGG | + | chr3.3:35060121-35060140 | MS.gene019117:intron | 50.0% |
| ! | CTCGTGATAGCGATGATCAC+TGG | - | chr3.3:35063219-35063238 | None:intergenic | 50.0% |
| ! | GAGTTCACGAGTTGAGCCAA+CGG | + | chr3.3:35061738-35061757 | MS.gene019117:intron | 50.0% |
| ! | GTGAAGGCTTGCTCCTCTAT+AGG | + | chr3.3:35060005-35060024 | MS.gene019117:intron | 50.0% |
| ! | TCTGTGGGGTATTTGTGCTC+TGG | - | chr3.3:35060997-35061016 | None:intergenic | 50.0% |
| !! | AAGACCGTGTCAGTGGACTA+GGG | + | chr3.3:35061166-35061185 | MS.gene019117:CDS | 50.0% |
| !! | ATTCTCCCTGGTGCCGATTT+CGG | + | chr3.3:35062817-35062836 | MS.gene019117:intron | 50.0% |
| !! | GTTGCCGTCTAGCTTTAGTG+AGG | + | chr3.3:35064128-35064147 | MS.gene019117:CDS | 50.0% |
| AAGAAATGGCTGGCATGGCG+TGG | + | chr3.3:35060260-35060279 | MS.gene019117:intron | 55.0% | |
| ACCACGAGGCCAACCCAATT+TGG | - | chr3.3:35062750-35062769 | None:intergenic | 55.0% | |
| AGGAGCAAGCCTTCACCACT+AGG | - | chr3.3:35060001-35060020 | None:intergenic | 55.0% | |
| CAAGGCCATAAGCTGTGCAG+GGG | - | chr3.3:35060723-35060742 | None:intergenic | 55.0% | |
| CAGATGACTCTGCCCCAAAC+AGG | + | chr3.3:35062385-35062404 | MS.gene019117:CDS | 55.0% | |
| CCAAGGCCATAAGCTGTGCA+GGG | - | chr3.3:35060724-35060743 | None:intergenic | 55.0% | |
| CCGAGGGACCAATCTCATTG+TGG | - | chr3.3:35060124-35060143 | None:intergenic | 55.0% | |
| CTTGCCCTAGTCCACTGACA+CGG | - | chr3.3:35061173-35061192 | None:intergenic | 55.0% | |
| GCCTGGCAAGAACTTTCCTG+TGG | + | chr3.3:35063082-35063101 | MS.gene019117:CDS | 55.0% | |
| GCTGGCGGGATTTCTTATCC+TGG | - | chr3.3:35063010-35063029 | None:intergenic | 55.0% | |
| GTTGTCAGACTGCTGCGATG+CGG | - | chr3.3:35062578-35062597 | None:intergenic | 55.0% | |
| TCCAAGGCCATAAGCTGTGC+AGG | - | chr3.3:35060725-35060744 | None:intergenic | 55.0% | |
| ! | CAAGACCGTGTCAGTGGACT+AGG | + | chr3.3:35061165-35061184 | MS.gene019117:CDS | 55.0% |
| ! | CTGTTTGGGGCAGAGTCATC+TGG | - | chr3.3:35062387-35062406 | None:intergenic | 55.0% |
| ! | GTCTGAGGTTCAAATCCCCC+AGG | + | chr3.3:35060027-35060046 | MS.gene019117:intron | 55.0% |
| !! | GTGGTGTTACCTTGGGACCT+TGG | + | chr3.3:35062765-35062784 | MS.gene019117:intron | 55.0% |
| !! | TCCAAATTGGGTTGGCCTCG+TGG | + | chr3.3:35062746-35062765 | MS.gene019117:intron | 55.0% |
| !! | TGGCCTCGTGGTGTTACCTT+GGG | + | chr3.3:35062758-35062777 | MS.gene019117:intron | 55.0% |
| !! | TTGGCCTCGTGGTGTTACCT+TGG | + | chr3.3:35062757-35062776 | MS.gene019117:intron | 55.0% |
| AGCTCACCGAAATCGGCACC+AGG | - | chr3.3:35062826-35062845 | None:intergenic | 60.0% | |
| CCCTGCACAGCTTATGGCCT+TGG | + | chr3.3:35060721-35060740 | MS.gene019117:CDS | 60.0% | |
| GCATTGTCTCTGAGCCCCCT+TGG | - | chr3.3:35059913-35059932 | None:intergenic | 60.0% | |
| GCTCACCGAAATCGGCACCA+GGG | - | chr3.3:35062825-35062844 | None:intergenic | 60.0% | |
| GGTCCCAAGGTAACACCACG+AGG | - | chr3.3:35062764-35062783 | None:intergenic | 60.0% | |
| !! | ATCCTAGGGGGTTGGCCTAG+TGG | + | chr3.3:35059983-35060002 | MS.gene019117:intron | 60.0% |
| CACCACTAGGCCAACCCCCT+AGG | - | chr3.3:35059988-35060007 | None:intergenic | 65.0% | |
| !! | GGGGGTTGGCCTAGTGGTGA+AGG | + | chr3.3:35059989-35060008 | MS.gene019117:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 35059463 | 35064188 | 35059463 | ID=MS.gene019117 |
| chr3.3 | mRNA | 35059463 | 35064188 | 35059463 | ID=MS.gene019117.t1;Parent=MS.gene019117 |
| chr3.3 | exon | 35059463 | 35059469 | 35059463 | ID=MS.gene019117.t1.exon1;Parent=MS.gene019117.t1 |
| chr3.3 | CDS | 35059463 | 35059469 | 35059463 | ID=cds.MS.gene019117.t1;Parent=MS.gene019117.t1 |
| chr3.3 | exon | 35060651 | 35060758 | 35060651 | ID=MS.gene019117.t1.exon2;Parent=MS.gene019117.t1 |
| chr3.3 | CDS | 35060651 | 35060758 | 35060651 | ID=cds.MS.gene019117.t1;Parent=MS.gene019117.t1 |
| chr3.3 | exon | 35060998 | 35061642 | 35060998 | ID=MS.gene019117.t1.exon3;Parent=MS.gene019117.t1 |
| chr3.3 | CDS | 35060998 | 35061642 | 35060998 | ID=cds.MS.gene019117.t1;Parent=MS.gene019117.t1 |
| chr3.3 | exon | 35062346 | 35062425 | 35062346 | ID=MS.gene019117.t1.exon4;Parent=MS.gene019117.t1 |
| chr3.3 | CDS | 35062346 | 35062425 | 35062346 | ID=cds.MS.gene019117.t1;Parent=MS.gene019117.t1 |
| chr3.3 | exon | 35062921 | 35063409 | 35062921 | ID=MS.gene019117.t1.exon5;Parent=MS.gene019117.t1 |
| chr3.3 | CDS | 35062921 | 35063409 | 35062921 | ID=cds.MS.gene019117.t1;Parent=MS.gene019117.t1 |
| chr3.3 | exon | 35063516 | 35063599 | 35063516 | ID=MS.gene019117.t1.exon6;Parent=MS.gene019117.t1 |
| chr3.3 | CDS | 35063516 | 35063599 | 35063516 | ID=cds.MS.gene019117.t1;Parent=MS.gene019117.t1 |
| chr3.3 | exon | 35063930 | 35064018 | 35063930 | ID=MS.gene019117.t1.exon7;Parent=MS.gene019117.t1 |
| chr3.3 | CDS | 35063930 | 35064018 | 35063930 | ID=cds.MS.gene019117.t1;Parent=MS.gene019117.t1 |
| chr3.3 | exon | 35064116 | 35064188 | 35064116 | ID=MS.gene019117.t1.exon8;Parent=MS.gene019117.t1 |
| chr3.3 | CDS | 35064116 | 35064188 | 35064116 | ID=cds.MS.gene019117.t1;Parent=MS.gene019117.t1 |
| Gene Sequence |
| Protein sequence |
