Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene019217.t1 | XP_024639715.1 | 83.6 | 244 | 20 | 1 | 1 | 224 | 1 | 244 | 7.40E-101 | 376.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene019217.t1 | Q8LLR2 | 56.7 | 245 | 82 | 4 | 1 | 223 | 1 | 243 | 2.2e-61 | 236.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene019217.t1 | A0A1S3VVP5 | 73.8 | 244 | 44 | 1 | 1 | 224 | 1 | 244 | 3.6e-89 | 337.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene019217.t1 | TF | MADS-MIKC |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene019217.t1 | MTR_5g046830 | 87.681 | 138 | 17 | 0 | 87 | 224 | 35 | 172 | 2.83e-84 | 248 |
MS.gene019217.t1 | MTR_6g015975 | 54.217 | 249 | 88 | 4 | 1 | 223 | 1 | 249 | 1.05e-82 | 247 |
MS.gene019217.t1 | MTR_7g016600 | 53.012 | 249 | 90 | 6 | 1 | 223 | 1 | 248 | 3.03e-78 | 235 |
MS.gene019217.t1 | MTR_8g097090 | 51.220 | 246 | 92 | 4 | 1 | 223 | 1 | 241 | 5.11e-74 | 224 |
MS.gene019217.t1 | MTR_4g109810 | 52.227 | 247 | 88 | 5 | 1 | 223 | 1 | 241 | 5.40e-74 | 224 |
MS.gene019217.t1 | MTR_3g084980 | 50.607 | 247 | 94 | 4 | 1 | 223 | 1 | 243 | 5.99e-73 | 222 |
MS.gene019217.t1 | MTR_5g046870 | 95.556 | 90 | 4 | 0 | 1 | 90 | 1 | 90 | 4.05e-58 | 179 |
MS.gene019217.t1 | MTR_7g075850 | 44.000 | 250 | 112 | 6 | 1 | 223 | 1 | 249 | 1.46e-55 | 177 |
MS.gene019217.t1 | MTR_8g033270 | 44.841 | 252 | 108 | 7 | 1 | 223 | 1 | 250 | 2.36e-54 | 174 |
MS.gene019217.t1 | MTR_4g109830 | 52.381 | 168 | 60 | 2 | 1 | 148 | 1 | 168 | 1.61e-50 | 164 |
MS.gene019217.t1 | MTR_8g066260 | 46.746 | 169 | 68 | 2 | 1 | 148 | 1 | 168 | 4.99e-44 | 148 |
MS.gene019217.t1 | MTR_5g046790 | 46.591 | 176 | 70 | 3 | 1 | 154 | 1 | 174 | 1.40e-42 | 143 |
MS.gene019217.t1 | MTR_7g016630 | 40.000 | 220 | 91 | 4 | 1 | 202 | 1 | 197 | 4.49e-42 | 143 |
MS.gene019217.t1 | MTR_6g464720 | 43.478 | 207 | 90 | 3 | 1 | 186 | 1 | 201 | 1.04e-41 | 142 |
MS.gene019217.t1 | MTR_7g075870 | 49.686 | 159 | 57 | 3 | 1 | 136 | 1 | 159 | 3.74e-41 | 139 |
MS.gene019217.t1 | MTR_4g102530 | 49.405 | 168 | 64 | 3 | 1 | 148 | 1 | 167 | 1.63e-40 | 137 |
MS.gene019217.t1 | MTR_1g101970 | 43.503 | 177 | 67 | 4 | 1 | 156 | 1 | 165 | 5.51e-40 | 135 |
MS.gene019217.t1 | MTR_3g005530 | 44.444 | 189 | 82 | 7 | 1 | 168 | 1 | 187 | 9.75e-40 | 136 |
MS.gene019217.t1 | MTR_7g075870 | 49.057 | 159 | 57 | 4 | 1 | 136 | 1 | 158 | 7.01e-39 | 134 |
MS.gene019217.t1 | MTR_8g033220 | 45.349 | 172 | 72 | 3 | 1 | 151 | 1 | 171 | 5.83e-38 | 132 |
MS.gene019217.t1 | MTR_8g033220 | 45.349 | 172 | 72 | 3 | 1 | 151 | 1 | 171 | 6.57e-38 | 131 |
MS.gene019217.t1 | MTR_3g452380 | 43.678 | 174 | 77 | 2 | 1 | 154 | 16 | 188 | 7.21e-38 | 132 |
MS.gene019217.t1 | MTR_2g017865 | 39.462 | 223 | 101 | 9 | 1 | 191 | 16 | 236 | 7.34e-38 | 132 |
MS.gene019217.t1 | MTR_8g087860 | 40.845 | 213 | 91 | 8 | 1 | 184 | 17 | 223 | 1.39e-37 | 131 |
MS.gene019217.t1 | MTR_0003s0590 | 34.454 | 238 | 116 | 6 | 1 | 200 | 1 | 236 | 5.36e-35 | 125 |
MS.gene019217.t1 | MTR_1g053070 | 44.693 | 179 | 74 | 4 | 1 | 155 | 1 | 178 | 5.78e-35 | 125 |
MS.gene019217.t1 | MTR_2g009890 | 41.954 | 174 | 81 | 3 | 1 | 155 | 1 | 173 | 1.39e-33 | 122 |
MS.gene019217.t1 | MTR_1g038300 | 40.230 | 174 | 80 | 3 | 1 | 150 | 1 | 174 | 2.71e-32 | 117 |
MS.gene019217.t1 | MTR_5g031000 | 40.645 | 155 | 73 | 2 | 1 | 137 | 1 | 154 | 1.14e-31 | 115 |
MS.gene019217.t1 | MTR_5g031000 | 40.645 | 155 | 73 | 2 | 1 | 137 | 1 | 154 | 1.66e-31 | 115 |
MS.gene019217.t1 | MTR_5g032150 | 36.816 | 201 | 103 | 4 | 1 | 179 | 1 | 199 | 5.01e-30 | 111 |
MS.gene019217.t1 | MTR_5g066180 | 35.135 | 185 | 101 | 2 | 1 | 167 | 1 | 184 | 2.88e-29 | 109 |
MS.gene019217.t1 | MTR_2g461710 | 77.966 | 59 | 13 | 0 | 1 | 59 | 1 | 59 | 8.69e-29 | 103 |
MS.gene019217.t1 | MTR_5g021270 | 40.361 | 166 | 78 | 5 | 1 | 146 | 1 | 165 | 2.83e-28 | 107 |
MS.gene019217.t1 | MTR_5g021270 | 40.361 | 166 | 78 | 5 | 1 | 146 | 1 | 165 | 3.21e-28 | 107 |
MS.gene019217.t1 | MTR_3g088615 | 41.844 | 141 | 66 | 4 | 1 | 125 | 1 | 141 | 6.59e-28 | 104 |
MS.gene019217.t1 | MTR_5g032520 | 38.235 | 170 | 82 | 3 | 1 | 149 | 1 | 168 | 2.92e-27 | 104 |
MS.gene019217.t1 | MTR_3g113030 | 37.870 | 169 | 89 | 3 | 1 | 153 | 1 | 169 | 1.54e-26 | 102 |
MS.gene019217.t1 | MTR_4g036050 | 38.994 | 159 | 76 | 2 | 1 | 138 | 1 | 159 | 2.46e-26 | 101 |
MS.gene019217.t1 | MTR_4g036050 | 59.459 | 74 | 30 | 0 | 1 | 74 | 1 | 74 | 9.10e-26 | 99.0 |
MS.gene019217.t1 | MTR_4g036050 | 38.608 | 158 | 76 | 2 | 1 | 137 | 1 | 158 | 1.07e-25 | 99.4 |
MS.gene019217.t1 | MTR_4g036050 | 59.459 | 74 | 30 | 0 | 1 | 74 | 1 | 74 | 1.10e-25 | 99.0 |
MS.gene019217.t1 | MTR_4g093970 | 32.653 | 196 | 108 | 4 | 1 | 173 | 27 | 221 | 5.76e-25 | 98.6 |
MS.gene019217.t1 | MTR_1g029670 | 35.795 | 176 | 86 | 5 | 1 | 160 | 1 | 165 | 1.33e-23 | 93.6 |
MS.gene019217.t1 | MTR_5g066960 | 64.407 | 59 | 21 | 0 | 1 | 59 | 1 | 59 | 2.32e-22 | 86.7 |
MS.gene019217.t1 | MTR_4g084740 | 55.714 | 70 | 31 | 0 | 1 | 70 | 1 | 70 | 3.83e-22 | 92.8 |
MS.gene019217.t1 | MTR_3g102570 | 58.571 | 70 | 29 | 0 | 1 | 70 | 1 | 70 | 4.95e-22 | 92.4 |
MS.gene019217.t1 | MTR_4g093030 | 44.444 | 108 | 38 | 3 | 1 | 90 | 1 | 104 | 4.99e-21 | 86.3 |
MS.gene019217.t1 | MTR_1g041615 | 75.000 | 44 | 11 | 0 | 16 | 59 | 20 | 63 | 1.84e-17 | 76.3 |
MS.gene019217.t1 | MTR_4g094632 | 39.450 | 109 | 65 | 1 | 1 | 109 | 1 | 108 | 6.78e-17 | 75.1 |
MS.gene019217.t1 | MTR_2g030740 | 50.725 | 69 | 33 | 1 | 2 | 70 | 9 | 76 | 1.14e-16 | 76.3 |
MS.gene019217.t1 | MTR_1g108510 | 47.826 | 69 | 35 | 1 | 2 | 70 | 9 | 76 | 2.96e-16 | 75.1 |
MS.gene019217.t1 | MTR_3g030770 | 47.826 | 69 | 35 | 1 | 2 | 70 | 9 | 76 | 3.12e-16 | 75.1 |
MS.gene019217.t1 | MTR_1g108580 | 47.826 | 69 | 35 | 1 | 2 | 70 | 9 | 76 | 7.36e-16 | 73.9 |
MS.gene019217.t1 | MTR_3g052920 | 50.725 | 69 | 33 | 1 | 2 | 70 | 9 | 76 | 7.75e-16 | 73.9 |
MS.gene019217.t1 | MTR_2g093190 | 46.377 | 69 | 36 | 1 | 2 | 70 | 9 | 76 | 1.08e-15 | 73.6 |
MS.gene019217.t1 | MTR_1g075600 | 33.333 | 141 | 79 | 3 | 2 | 142 | 9 | 134 | 1.20e-15 | 73.6 |
MS.gene019217.t1 | MTR_2g085250 | 26.087 | 230 | 138 | 7 | 2 | 223 | 9 | 214 | 2.00e-15 | 73.2 |
MS.gene019217.t1 | MTR_2g085280 | 26.087 | 230 | 138 | 7 | 2 | 223 | 9 | 214 | 2.28e-15 | 72.8 |
MS.gene019217.t1 | MTR_8g051580 | 50.877 | 57 | 28 | 0 | 1 | 57 | 1 | 57 | 2.40e-15 | 71.6 |
MS.gene019217.t1 | MTR_1g105910 | 31.618 | 136 | 67 | 2 | 2 | 137 | 9 | 118 | 2.61e-15 | 72.8 |
MS.gene019217.t1 | MTR_8g079502 | 52.632 | 57 | 27 | 0 | 1 | 57 | 1 | 57 | 3.38e-15 | 71.2 |
MS.gene019217.t1 | MTR_3g052870 | 47.826 | 69 | 35 | 1 | 2 | 70 | 9 | 76 | 3.38e-15 | 72.0 |
MS.gene019217.t1 | MTR_5g045560 | 50.000 | 70 | 34 | 1 | 1 | 70 | 8 | 76 | 5.35e-15 | 72.0 |
MS.gene019217.t1 | MTR_8g043650 | 47.826 | 69 | 35 | 1 | 2 | 70 | 9 | 76 | 5.98e-15 | 71.6 |
MS.gene019217.t1 | MTR_1g105920 | 47.826 | 69 | 35 | 1 | 2 | 70 | 9 | 76 | 6.49e-15 | 71.6 |
MS.gene019217.t1 | MTR_1g063160 | 33.333 | 126 | 67 | 3 | 1 | 125 | 1 | 110 | 1.15e-14 | 69.7 |
MS.gene019217.t1 | MTR_8g086290 | 51.786 | 56 | 27 | 0 | 2 | 57 | 12 | 67 | 1.26e-14 | 69.7 |
MS.gene019217.t1 | MTR_1g077360 | 47.826 | 69 | 35 | 1 | 2 | 70 | 9 | 76 | 1.36e-14 | 70.9 |
MS.gene019217.t1 | MTR_1g047550 | 52.632 | 57 | 27 | 0 | 1 | 57 | 1 | 57 | 1.40e-14 | 69.7 |
MS.gene019217.t1 | MTR_2g105290 | 52.632 | 57 | 27 | 0 | 1 | 57 | 11 | 67 | 1.42e-14 | 69.3 |
MS.gene019217.t1 | MTR_1g012570 | 57.143 | 56 | 24 | 0 | 2 | 57 | 9 | 64 | 1.87e-14 | 70.5 |
MS.gene019217.t1 | MTR_1g054265 | 50.877 | 57 | 28 | 0 | 1 | 57 | 1 | 57 | 3.44e-14 | 68.2 |
MS.gene019217.t1 | MTR_5g041650 | 54.717 | 53 | 24 | 0 | 1 | 53 | 38 | 90 | 8.09e-14 | 70.1 |
MS.gene019217.t1 | MTR_4g131030 | 49.123 | 57 | 29 | 0 | 1 | 57 | 1 | 57 | 8.34e-14 | 68.2 |
MS.gene019217.t1 | MTR_0121s0100 | 50.000 | 56 | 28 | 0 | 2 | 57 | 9 | 64 | 1.00e-13 | 66.2 |
MS.gene019217.t1 | MTR_1g106070 | 44.928 | 69 | 37 | 1 | 2 | 70 | 9 | 76 | 1.28e-13 | 67.0 |
MS.gene019217.t1 | MTR_5g055100 | 47.826 | 69 | 35 | 1 | 2 | 70 | 9 | 76 | 1.61e-13 | 67.8 |
MS.gene019217.t1 | MTR_5g053390 | 55.357 | 56 | 25 | 0 | 2 | 57 | 9 | 64 | 2.83e-13 | 67.0 |
MS.gene019217.t1 | MTR_4g094638 | 47.458 | 59 | 31 | 0 | 1 | 59 | 1 | 59 | 6.29e-13 | 65.1 |
MS.gene019217.t1 | MTR_4g108720 | 50.943 | 53 | 26 | 0 | 1 | 53 | 1 | 53 | 1.21e-12 | 66.2 |
MS.gene019217.t1 | MTR_0121s0080 | 45.070 | 71 | 36 | 2 | 2 | 70 | 7 | 76 | 1.32e-12 | 65.1 |
MS.gene019217.t1 | MTR_3g080940 | 41.429 | 70 | 40 | 1 | 1 | 70 | 8 | 76 | 2.34e-12 | 63.9 |
MS.gene019217.t1 | MTR_3g030780 | 42.029 | 69 | 39 | 1 | 2 | 70 | 9 | 76 | 3.43e-12 | 62.0 |
MS.gene019217.t1 | MTR_8g046350 | 45.614 | 57 | 31 | 0 | 1 | 57 | 1 | 57 | 4.06e-12 | 62.4 |
MS.gene019217.t1 | MTR_2g461760 | 38.393 | 112 | 49 | 2 | 63 | 154 | 1 | 112 | 5.17e-12 | 62.4 |
MS.gene019217.t1 | MTR_2g461760 | 38.393 | 112 | 49 | 2 | 63 | 154 | 1 | 112 | 6.35e-12 | 62.4 |
MS.gene019217.t1 | MTR_7g028448 | 31.387 | 137 | 66 | 3 | 16 | 128 | 26 | 158 | 7.78e-12 | 62.0 |
MS.gene019217.t1 | MTR_4g036915 | 31.387 | 137 | 66 | 3 | 16 | 128 | 26 | 158 | 7.78e-12 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene019217.t1 | AT5G15800 | 52.400 | 250 | 92 | 3 | 1 | 223 | 1 | 250 | 8.21e-79 | 237 |
MS.gene019217.t1 | AT3G02310 | 50.201 | 249 | 98 | 4 | 1 | 223 | 1 | 249 | 1.37e-76 | 231 |
MS.gene019217.t1 | AT5G15800 | 50.192 | 261 | 92 | 4 | 1 | 223 | 1 | 261 | 3.84e-75 | 228 |
MS.gene019217.t1 | AT2G03710 | 49.421 | 259 | 93 | 7 | 1 | 223 | 1 | 257 | 4.30e-72 | 220 |
MS.gene019217.t1 | AT2G03710 | 49.225 | 258 | 94 | 7 | 1 | 223 | 1 | 256 | 4.59e-72 | 220 |
MS.gene019217.t1 | AT1G24260 | 51.004 | 249 | 90 | 7 | 1 | 223 | 1 | 243 | 3.59e-69 | 212 |
MS.gene019217.t1 | AT1G24260 | 50.000 | 250 | 92 | 6 | 1 | 223 | 1 | 244 | 4.18e-69 | 212 |
MS.gene019217.t1 | AT3G02310 | 57.542 | 179 | 56 | 1 | 1 | 159 | 1 | 179 | 6.62e-63 | 194 |
MS.gene019217.t1 | AT1G24260 | 47.410 | 251 | 83 | 7 | 1 | 223 | 1 | 230 | 5.54e-62 | 194 |
MS.gene019217.t1 | AT2G03710 | 58.721 | 172 | 51 | 3 | 1 | 152 | 1 | 172 | 1.99e-61 | 191 |
MS.gene019217.t1 | AT2G45650 | 43.529 | 255 | 108 | 8 | 1 | 223 | 1 | 251 | 8.02e-56 | 178 |
MS.gene019217.t1 | AT5G60910 | 38.272 | 243 | 121 | 5 | 1 | 223 | 1 | 234 | 5.97e-48 | 158 |
MS.gene019217.t1 | AT1G69120 | 47.222 | 180 | 75 | 3 | 1 | 160 | 1 | 180 | 1.70e-46 | 154 |
MS.gene019217.t1 | AT1G69120 | 47.222 | 180 | 75 | 3 | 1 | 160 | 1 | 180 | 5.04e-46 | 153 |
MS.gene019217.t1 | AT3G61120 | 39.419 | 241 | 118 | 5 | 1 | 217 | 1 | 237 | 8.06e-46 | 152 |
MS.gene019217.t1 | AT1G26310 | 46.842 | 190 | 79 | 2 | 1 | 168 | 1 | 190 | 5.20e-45 | 150 |
MS.gene019217.t1 | AT3G30260 | 47.020 | 151 | 60 | 2 | 1 | 131 | 1 | 151 | 9.44e-42 | 142 |
MS.gene019217.t1 | AT4G09960 | 46.023 | 176 | 72 | 7 | 1 | 155 | 2 | 175 | 8.32e-41 | 139 |
MS.gene019217.t1 | AT4G09960 | 46.023 | 176 | 72 | 7 | 1 | 155 | 11 | 184 | 9.51e-41 | 139 |
MS.gene019217.t1 | AT4G09960 | 46.023 | 176 | 72 | 7 | 1 | 155 | 1 | 174 | 1.02e-40 | 139 |
MS.gene019217.t1 | AT4G11880 | 50.633 | 158 | 55 | 3 | 1 | 137 | 1 | 156 | 1.63e-40 | 137 |
MS.gene019217.t1 | AT4G11880 | 50.633 | 158 | 55 | 3 | 1 | 137 | 1 | 156 | 1.63e-40 | 137 |
MS.gene019217.t1 | AT4G09960 | 46.023 | 176 | 72 | 7 | 1 | 155 | 27 | 200 | 3.20e-40 | 138 |
MS.gene019217.t1 | AT4G11880 | 53.425 | 146 | 45 | 3 | 1 | 125 | 1 | 144 | 2.55e-39 | 135 |
MS.gene019217.t1 | AT4G11880 | 53.425 | 146 | 45 | 3 | 1 | 125 | 1 | 144 | 2.55e-39 | 135 |
MS.gene019217.t1 | AT4G18960 | 40.654 | 214 | 98 | 6 | 2 | 187 | 18 | 230 | 2.64e-39 | 136 |
MS.gene019217.t1 | AT3G58780 | 44.000 | 175 | 75 | 4 | 1 | 154 | 22 | 194 | 3.63e-39 | 135 |
MS.gene019217.t1 | AT3G58780 | 44.000 | 175 | 75 | 4 | 1 | 154 | 16 | 188 | 4.58e-39 | 135 |
MS.gene019217.t1 | AT2G42830 | 39.732 | 224 | 109 | 6 | 1 | 199 | 16 | 238 | 5.67e-39 | 135 |
MS.gene019217.t1 | AT2G42830 | 39.910 | 223 | 108 | 6 | 1 | 199 | 16 | 236 | 6.00e-39 | 135 |
MS.gene019217.t1 | AT4G09960 | 45.251 | 179 | 73 | 7 | 1 | 155 | 96 | 273 | 6.85e-39 | 137 |
MS.gene019217.t1 | AT4G22950 | 47.399 | 173 | 69 | 4 | 1 | 153 | 1 | 171 | 8.02e-39 | 132 |
MS.gene019217.t1 | AT4G22950 | 47.953 | 171 | 67 | 4 | 1 | 151 | 1 | 169 | 4.76e-38 | 132 |
MS.gene019217.t1 | AT4G22950 | 47.953 | 171 | 67 | 4 | 1 | 151 | 1 | 169 | 4.76e-38 | 132 |
MS.gene019217.t1 | AT5G62165 | 44.086 | 186 | 77 | 4 | 1 | 166 | 1 | 179 | 8.63e-38 | 131 |
MS.gene019217.t1 | AT5G62165 | 44.086 | 186 | 77 | 4 | 1 | 166 | 1 | 179 | 8.63e-38 | 131 |
MS.gene019217.t1 | AT5G62165 | 44.086 | 186 | 77 | 4 | 1 | 166 | 1 | 179 | 8.63e-38 | 131 |
MS.gene019217.t1 | AT2G45660 | 48.447 | 161 | 58 | 4 | 1 | 139 | 1 | 158 | 1.22e-37 | 130 |
MS.gene019217.t1 | AT2G45660 | 48.428 | 159 | 57 | 4 | 1 | 137 | 1 | 156 | 1.68e-37 | 128 |
MS.gene019217.t1 | AT2G14210 | 43.195 | 169 | 77 | 2 | 1 | 150 | 1 | 169 | 1.80e-37 | 130 |
MS.gene019217.t1 | AT2G14210 | 43.195 | 169 | 77 | 2 | 1 | 150 | 1 | 169 | 2.55e-37 | 130 |
MS.gene019217.t1 | AT4G09960 | 44.318 | 176 | 61 | 7 | 1 | 155 | 1 | 160 | 3.57e-37 | 129 |
MS.gene019217.t1 | AT5G62165 | 45.223 | 157 | 65 | 2 | 1 | 137 | 1 | 156 | 3.74e-36 | 125 |
MS.gene019217.t1 | AT5G62165 | 45.223 | 157 | 65 | 2 | 1 | 137 | 1 | 156 | 3.74e-36 | 125 |
MS.gene019217.t1 | AT5G62165 | 45.223 | 157 | 65 | 2 | 1 | 137 | 1 | 156 | 3.74e-36 | 125 |
MS.gene019217.t1 | AT3G58780 | 41.714 | 175 | 72 | 4 | 1 | 154 | 16 | 181 | 1.30e-35 | 126 |
MS.gene019217.t1 | AT3G58780 | 38.693 | 199 | 76 | 4 | 1 | 154 | 16 | 213 | 9.12e-35 | 125 |
MS.gene019217.t1 | AT5G65070 | 43.902 | 164 | 80 | 2 | 1 | 152 | 1 | 164 | 1.63e-34 | 122 |
MS.gene019217.t1 | AT5G62165 | 43.949 | 157 | 67 | 2 | 1 | 137 | 1 | 156 | 2.54e-34 | 121 |
MS.gene019217.t1 | AT5G62165 | 43.949 | 157 | 67 | 2 | 1 | 137 | 1 | 156 | 2.54e-34 | 121 |
MS.gene019217.t1 | AT5G62165 | 45.946 | 148 | 58 | 3 | 1 | 128 | 1 | 146 | 2.97e-34 | 120 |
MS.gene019217.t1 | AT5G62165 | 45.946 | 148 | 58 | 3 | 1 | 128 | 1 | 146 | 2.97e-34 | 120 |
MS.gene019217.t1 | AT5G62165 | 45.946 | 148 | 58 | 3 | 1 | 128 | 1 | 146 | 2.97e-34 | 120 |
MS.gene019217.t1 | AT5G62165 | 45.946 | 148 | 58 | 3 | 1 | 128 | 1 | 146 | 2.97e-34 | 120 |
MS.gene019217.t1 | AT5G62165 | 45.946 | 148 | 58 | 3 | 1 | 128 | 1 | 146 | 2.97e-34 | 120 |
MS.gene019217.t1 | AT3G58780 | 45.270 | 148 | 60 | 2 | 1 | 128 | 16 | 162 | 3.45e-34 | 124 |
MS.gene019217.t1 | AT5G51870 | 38.725 | 204 | 90 | 6 | 1 | 180 | 1 | 193 | 3.91e-34 | 121 |
MS.gene019217.t1 | AT5G51870 | 37.198 | 207 | 101 | 6 | 1 | 180 | 11 | 215 | 6.40e-34 | 121 |
MS.gene019217.t1 | AT5G51870 | 37.198 | 207 | 101 | 6 | 1 | 180 | 1 | 205 | 8.12e-34 | 121 |
MS.gene019217.t1 | AT5G65060 | 43.312 | 157 | 72 | 4 | 1 | 148 | 1 | 149 | 1.20e-33 | 119 |
MS.gene019217.t1 | AT3G57390 | 39.891 | 183 | 76 | 3 | 1 | 153 | 1 | 179 | 6.39e-33 | 119 |
MS.gene019217.t1 | AT5G65060 | 38.012 | 171 | 94 | 3 | 1 | 159 | 1 | 171 | 6.82e-33 | 117 |
MS.gene019217.t1 | AT5G65060 | 40.625 | 160 | 83 | 3 | 1 | 148 | 1 | 160 | 8.04e-33 | 117 |
MS.gene019217.t1 | AT3G57390 | 39.891 | 183 | 76 | 3 | 1 | 153 | 1 | 179 | 8.22e-33 | 119 |
MS.gene019217.t1 | AT5G10140 | 42.384 | 151 | 75 | 3 | 1 | 139 | 1 | 151 | 9.86e-33 | 117 |
MS.gene019217.t1 | AT5G65050 | 43.312 | 157 | 72 | 4 | 1 | 148 | 1 | 149 | 1.54e-32 | 117 |
MS.gene019217.t1 | AT5G13790 | 42.045 | 176 | 87 | 4 | 1 | 163 | 1 | 174 | 3.03e-32 | 118 |
MS.gene019217.t1 | AT5G62165 | 61.798 | 89 | 33 | 1 | 1 | 89 | 1 | 88 | 3.04e-32 | 113 |
MS.gene019217.t1 | AT3G57230 | 38.660 | 194 | 94 | 4 | 1 | 174 | 1 | 189 | 3.91e-32 | 117 |
MS.gene019217.t1 | AT3G57230 | 38.660 | 194 | 94 | 4 | 1 | 174 | 1 | 189 | 3.91e-32 | 117 |
MS.gene019217.t1 | AT5G10140 | 41.818 | 165 | 84 | 3 | 1 | 153 | 1 | 165 | 4.42e-32 | 115 |
MS.gene019217.t1 | AT5G65050 | 40.994 | 161 | 81 | 4 | 1 | 148 | 1 | 160 | 8.17e-32 | 114 |
MS.gene019217.t1 | AT5G13790 | 42.222 | 180 | 84 | 5 | 1 | 163 | 1 | 177 | 1.17e-31 | 117 |
MS.gene019217.t1 | AT4G37940 | 38.857 | 175 | 87 | 3 | 1 | 156 | 1 | 174 | 1.26e-31 | 115 |
MS.gene019217.t1 | AT5G10140 | 43.571 | 140 | 67 | 3 | 1 | 128 | 1 | 140 | 1.54e-31 | 113 |
MS.gene019217.t1 | AT5G65050 | 41.250 | 160 | 82 | 3 | 1 | 148 | 1 | 160 | 2.73e-31 | 114 |
MS.gene019217.t1 | AT3G54340 | 39.053 | 169 | 87 | 3 | 1 | 153 | 1 | 169 | 3.48e-31 | 114 |
MS.gene019217.t1 | AT5G10140 | 41.463 | 164 | 84 | 3 | 1 | 152 | 1 | 164 | 3.79e-31 | 113 |
MS.gene019217.t1 | AT2G22540 | 41.176 | 170 | 77 | 3 | 1 | 149 | 1 | 168 | 3.99e-31 | 114 |
MS.gene019217.t1 | AT2G22540 | 41.176 | 170 | 77 | 3 | 1 | 149 | 1 | 168 | 3.99e-31 | 114 |
MS.gene019217.t1 | AT3G57230 | 45.139 | 144 | 57 | 3 | 1 | 124 | 1 | 142 | 6.15e-31 | 111 |
MS.gene019217.t1 | AT5G51870 | 40.816 | 147 | 63 | 3 | 1 | 125 | 1 | 145 | 1.09e-30 | 111 |
MS.gene019217.t1 | AT5G51870 | 40.816 | 147 | 63 | 3 | 1 | 125 | 24 | 168 | 3.09e-30 | 111 |
MS.gene019217.t1 | AT1G71692 | 36.816 | 201 | 99 | 5 | 1 | 173 | 1 | 201 | 3.74e-30 | 111 |
MS.gene019217.t1 | AT5G65050 | 41.892 | 148 | 74 | 3 | 1 | 136 | 1 | 148 | 4.05e-30 | 110 |
MS.gene019217.t1 | AT5G65070 | 44.286 | 140 | 66 | 2 | 1 | 128 | 1 | 140 | 4.83e-30 | 109 |
MS.gene019217.t1 | AT5G65070 | 38.462 | 195 | 77 | 3 | 1 | 152 | 1 | 195 | 6.75e-30 | 111 |
MS.gene019217.t1 | AT4G37940 | 42.958 | 142 | 61 | 3 | 1 | 123 | 1 | 141 | 8.81e-30 | 109 |
MS.gene019217.t1 | AT4G37940 | 41.026 | 156 | 72 | 3 | 1 | 137 | 1 | 155 | 1.33e-29 | 110 |
MS.gene019217.t1 | AT2G22630 | 40.000 | 175 | 85 | 4 | 1 | 156 | 1 | 174 | 3.33e-29 | 109 |
MS.gene019217.t1 | AT2G22630 | 40.000 | 175 | 85 | 4 | 1 | 156 | 1 | 174 | 3.33e-29 | 109 |
MS.gene019217.t1 | AT5G65080 | 45.098 | 153 | 64 | 3 | 1 | 137 | 8 | 156 | 3.94e-29 | 108 |
MS.gene019217.t1 | AT5G23260 | 39.634 | 164 | 81 | 3 | 1 | 146 | 1 | 164 | 1.12e-28 | 108 |
MS.gene019217.t1 | AT5G65070 | 38.308 | 201 | 70 | 5 | 1 | 152 | 1 | 196 | 1.35e-28 | 107 |
MS.gene019217.t1 | AT5G23260 | 39.634 | 164 | 81 | 3 | 1 | 146 | 17 | 180 | 1.59e-28 | 108 |
MS.gene019217.t1 | AT5G51860 | 39.623 | 159 | 74 | 3 | 1 | 138 | 1 | 158 | 2.15e-28 | 106 |
MS.gene019217.t1 | AT5G51860 | 39.623 | 159 | 74 | 3 | 1 | 138 | 1 | 158 | 2.36e-28 | 106 |
MS.gene019217.t1 | AT5G65070 | 67.606 | 71 | 23 | 0 | 1 | 71 | 1 | 71 | 7.42e-28 | 105 |
MS.gene019217.t1 | AT2G22540 | 38.824 | 170 | 76 | 3 | 1 | 149 | 1 | 163 | 1.03e-27 | 105 |
MS.gene019217.t1 | AT4G24540 | 38.764 | 178 | 82 | 4 | 1 | 155 | 1 | 174 | 5.53e-27 | 103 |
MS.gene019217.t1 | AT1G77080 | 38.554 | 166 | 90 | 2 | 1 | 154 | 1 | 166 | 2.53e-26 | 100 |
MS.gene019217.t1 | AT5G23260 | 39.024 | 164 | 77 | 4 | 1 | 146 | 17 | 175 | 2.57e-26 | 102 |
MS.gene019217.t1 | AT1G77080 | 38.750 | 160 | 86 | 2 | 1 | 148 | 1 | 160 | 9.11e-26 | 99.0 |
MS.gene019217.t1 | AT1G77080 | 37.805 | 164 | 90 | 2 | 1 | 152 | 1 | 164 | 1.46e-25 | 99.0 |
MS.gene019217.t1 | AT5G65080 | 37.949 | 195 | 100 | 6 | 1 | 182 | 8 | 194 | 5.20e-25 | 97.8 |
MS.gene019217.t1 | AT5G23260 | 39.716 | 141 | 67 | 3 | 1 | 123 | 1 | 141 | 1.56e-24 | 97.4 |
MS.gene019217.t1 | AT5G20240 | 38.571 | 140 | 80 | 4 | 1 | 135 | 1 | 139 | 3.31e-24 | 94.4 |
MS.gene019217.t1 | AT5G20240 | 34.028 | 144 | 79 | 2 | 1 | 128 | 1 | 144 | 3.85e-23 | 93.2 |
MS.gene019217.t1 | AT1G77980 | 57.143 | 70 | 30 | 0 | 1 | 70 | 1 | 70 | 4.95e-22 | 92.4 |
MS.gene019217.t1 | AT1G31140 | 40.260 | 154 | 58 | 4 | 1 | 127 | 1 | 147 | 5.52e-22 | 90.1 |
MS.gene019217.t1 | AT1G77080 | 37.500 | 160 | 92 | 3 | 1 | 152 | 1 | 160 | 5.59e-22 | 89.7 |
MS.gene019217.t1 | AT1G22130 | 57.143 | 70 | 30 | 0 | 1 | 70 | 1 | 70 | 7.71e-22 | 92.0 |
MS.gene019217.t1 | AT1G31140 | 39.744 | 156 | 58 | 4 | 1 | 127 | 1 | 149 | 1.06e-21 | 89.4 |
MS.gene019217.t1 | AT1G77080 | 32.984 | 191 | 89 | 3 | 1 | 152 | 1 | 191 | 2.26e-21 | 89.0 |
MS.gene019217.t1 | AT1G77080 | 38.621 | 145 | 81 | 3 | 1 | 137 | 1 | 145 | 9.06e-20 | 82.8 |
MS.gene019217.t1 | AT1G77950 | 52.857 | 70 | 33 | 0 | 1 | 70 | 1 | 70 | 1.54e-19 | 84.3 |
MS.gene019217.t1 | AT1G77950 | 52.857 | 70 | 33 | 0 | 1 | 70 | 1 | 70 | 1.54e-19 | 84.3 |
MS.gene019217.t1 | AT1G77950 | 52.857 | 70 | 33 | 0 | 1 | 70 | 1 | 70 | 1.54e-19 | 84.3 |
MS.gene019217.t1 | AT1G77950 | 52.857 | 70 | 33 | 0 | 1 | 70 | 1 | 70 | 1.54e-19 | 84.3 |
MS.gene019217.t1 | AT4G37435 | 43.617 | 94 | 44 | 2 | 1 | 90 | 1 | 89 | 4.92e-18 | 79.0 |
MS.gene019217.t1 | AT4G36590 | 33.125 | 160 | 82 | 5 | 2 | 137 | 7 | 165 | 4.65e-16 | 75.1 |
MS.gene019217.t1 | AT1G01530 | 54.386 | 57 | 26 | 0 | 1 | 57 | 6 | 62 | 3.58e-15 | 72.4 |
MS.gene019217.t1 | AT1G18750 | 52.632 | 57 | 27 | 0 | 1 | 57 | 1 | 57 | 1.19e-14 | 72.4 |
MS.gene019217.t1 | AT1G18750 | 52.632 | 57 | 27 | 0 | 1 | 57 | 1 | 57 | 1.36e-14 | 72.4 |
MS.gene019217.t1 | AT1G18750 | 52.632 | 57 | 27 | 0 | 1 | 57 | 1 | 57 | 1.67e-14 | 72.0 |
MS.gene019217.t1 | AT2G03060 | 46.053 | 76 | 38 | 2 | 1 | 74 | 1 | 75 | 3.00e-14 | 71.2 |
MS.gene019217.t1 | AT2G03060 | 46.053 | 76 | 38 | 2 | 1 | 74 | 1 | 75 | 3.00e-14 | 71.2 |
MS.gene019217.t1 | AT2G03060 | 46.053 | 76 | 38 | 2 | 1 | 74 | 1 | 75 | 3.00e-14 | 71.2 |
MS.gene019217.t1 | AT2G03060 | 46.053 | 76 | 38 | 2 | 1 | 74 | 1 | 75 | 3.81e-14 | 70.9 |
MS.gene019217.t1 | AT1G72350 | 47.887 | 71 | 34 | 1 | 2 | 72 | 43 | 110 | 6.59e-14 | 68.6 |
MS.gene019217.t1 | AT3G04100 | 33.088 | 136 | 79 | 6 | 2 | 131 | 14 | 143 | 9.94e-14 | 67.8 |
MS.gene019217.t1 | AT2G34440 | 40.278 | 72 | 42 | 1 | 1 | 72 | 1 | 71 | 2.28e-13 | 66.2 |
MS.gene019217.t1 | AT5G60440 | 44.928 | 69 | 37 | 1 | 2 | 70 | 7 | 74 | 2.44e-13 | 68.2 |
MS.gene019217.t1 | AT1G65360 | 47.368 | 57 | 30 | 0 | 1 | 57 | 6 | 62 | 5.34e-13 | 66.2 |
MS.gene019217.t1 | AT3G66656 | 47.368 | 57 | 30 | 0 | 1 | 57 | 1 | 57 | 7.22e-13 | 65.1 |
MS.gene019217.t1 | AT1G69540 | 40.541 | 74 | 44 | 0 | 1 | 74 | 1 | 74 | 1.17e-12 | 66.6 |
MS.gene019217.t1 | AT1G47760 | 30.380 | 158 | 68 | 4 | 1 | 155 | 1 | 119 | 1.21e-12 | 64.3 |
MS.gene019217.t1 | AT2G24840 | 42.857 | 70 | 39 | 1 | 1 | 70 | 62 | 130 | 1.61e-12 | 65.5 |
MS.gene019217.t1 | AT1G69540 | 40.541 | 74 | 44 | 0 | 1 | 74 | 1 | 74 | 1.66e-12 | 66.2 |
MS.gene019217.t1 | AT1G29962 | 44.928 | 69 | 37 | 1 | 2 | 70 | 8 | 75 | 4.22e-11 | 60.5 |
MS.gene019217.t1 | AT1G28460 | 46.377 | 69 | 36 | 1 | 2 | 70 | 8 | 75 | 5.02e-11 | 60.1 |
Find 49 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AACACCTGTGTCTCAATTTC+AGG | 0.184243 | 3.2:+39432144 | None:intergenic |
TGCAATAGTACATTGCAAAT+TGG | 0.210363 | 3.2:-39410748 | MS.gene019217:CDS |
TCACCCTGTAGGAACTTTCT+TGG | 0.302878 | 3.2:-39415588 | MS.gene019217:intron |
GAACTTTCTTGGAGAAGAAT+TGG | 0.314870 | 3.2:-39415577 | MS.gene019217:CDS |
GTTTGACCTGATTGTCTTCA+AGG | 0.326548 | 3.2:+39415503 | None:intergenic |
GCAATAGTACATTGCAAATT+GGG | 0.337564 | 3.2:-39410747 | MS.gene019217:intron |
ACATTTGCAAAGAGAAGAAA+TGG | 0.365480 | 3.2:-39444317 | MS.gene019217:CDS |
TAATAATATTCTGAGGAATA+AGG | 0.369120 | 3.2:-39413990 | MS.gene019217:intron |
ACTCTTCCTTGAAGACAATC+AGG | 0.408503 | 3.2:-39415509 | MS.gene019217:CDS |
GTGTCTCAATTTCAGGTTGG+TGG | 0.408967 | 3.2:+39432151 | None:intergenic |
GCATATGCTTGATCAACTTA+AGG | 0.414052 | 3.2:-39414134 | MS.gene019217:CDS |
TTTCTACAGCTACAATTCTT+CGG | 0.421665 | 3.2:-39410662 | MS.gene019217:intron |
AAGCAATAAAATAATGGGTA+GGG | 0.438614 | 3.2:-39444387 | None:intergenic |
CCATCCATGCATGAAGTCAT+TGG | 0.440894 | 3.2:+39410594 | None:intergenic |
TGGAGAAGAATTGGAGCAGT+TGG | 0.442612 | 3.2:-39415568 | MS.gene019217:CDS |
CTGATACCGTTCAATTGTCT+TGG | 0.454596 | 3.2:+39432203 | None:intergenic |
TGCTCACTAGATTCCCATGT+TGG | 0.458674 | 3.2:+39410829 | None:intergenic |
GGGGAAAGGTAGAGCTAAAG+AGG | 0.465681 | 3.2:-39444367 | MS.gene019217:CDS |
TTGGTGAGGGTGGCCGCTAT+AGG | 0.471675 | 3.2:+39410798 | None:intergenic |
TCTCAAAGTATCCCTCTGAT+TGG | 0.474526 | 3.2:+39410779 | None:intergenic |
TAGATTCCCATGTTGGTTGA+AGG | 0.475311 | 3.2:+39410836 | None:intergenic |
AAAGCAATAAAATAATGGGT+AGG | 0.518687 | 3.2:-39444388 | None:intergenic |
TAAAATAATGGGTAGGGGAA+AGG | 0.519037 | 3.2:-39444381 | None:intergenic |
AATGAATCAAGTGGAGCTGC+AGG | 0.520878 | 3.2:-39410634 | MS.gene019217:CDS |
AGCAATAAAATAATGGGTAG+GGG | 0.548277 | 3.2:-39444386 | None:intergenic |
ATGTGATCCTTCAACCAACA+TGG | 0.550991 | 3.2:-39410843 | MS.gene019217:CDS |
CCAATGACTTCATGCATGGA+TGG | 0.554811 | 3.2:-39410594 | MS.gene019217:CDS |
ATGAGTTCAGCAGTGGCACT+AGG | 0.557170 | 3.2:-39444211 | MS.gene019217:intron |
GAGATGCAGCTATGAAGCAT+TGG | 0.562482 | 3.2:-39432181 | MS.gene019217:CDS |
GTCATTGGCATTATGAGATG+AGG | 0.583109 | 3.2:+39410609 | None:intergenic |
AAGAAATGGGATGCTCAAGA+AGG | 0.585500 | 3.2:-39444303 | MS.gene019217:CDS |
AAGTATCCCTCTGATTGGTG+AGG | 0.600593 | 3.2:+39410784 | None:intergenic |
ATCCCTCTGATTGGTGAGGG+TGG | 0.605668 | 3.2:+39410788 | None:intergenic |
CATTTGCAAAGAGAAGAAAT+GGG | 0.608010 | 3.2:-39444316 | MS.gene019217:CDS |
CGGCCACCCTCACCAATCAG+AGG | 0.609607 | 3.2:-39410791 | MS.gene019217:CDS |
AATGCCAATGACTTCATGCA+TGG | 0.610298 | 3.2:-39410598 | MS.gene019217:CDS |
AGTATCCCTCTGATTGGTGA+GGG | 0.616239 | 3.2:+39410785 | None:intergenic |
CCTGTGTCTCAATTTCAGGT+TGG | 0.617906 | 3.2:+39432148 | None:intergenic |
TCGGCGTTAAATGAATCAAG+TGG | 0.618267 | 3.2:-39410643 | MS.gene019217:CDS |
GAAGACAATCAGGTCAAACA+AGG | 0.622192 | 3.2:-39415499 | MS.gene019217:intron |
CCAACCTGAAATTGAGACAC+AGG | 0.623404 | 3.2:-39432148 | MS.gene019217:CDS |
TAGAAACTAATAATATTCTG+AGG | 0.626809 | 3.2:-39413997 | MS.gene019217:CDS |
TGTGATCCTTCAACCAACAT+GGG | 0.631019 | 3.2:-39410842 | MS.gene019217:CDS |
GGCCACCCTCACCAATCAGA+GGG | 0.631465 | 3.2:-39410790 | MS.gene019217:CDS |
GAGCAAAATGCAACCTATAG+CGG | 0.636401 | 3.2:-39410811 | MS.gene019217:CDS |
AAGCTCTATGAGTTCAGCAG+TGG | 0.662880 | 3.2:-39444218 | MS.gene019217:CDS |
GCATGGCCAAGACAATTGAA+CGG | 0.666241 | 3.2:-39432209 | MS.gene019217:CDS |
GAGCAACTTCAGCTTCACAA+AGG | 0.690983 | 3.2:+39444264 | None:intergenic |
TGAACTCATAGAGCTTTCCA+CGG | 0.694795 | 3.2:+39444225 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 39410585 | 39444396 | 39410585 | ID=MS.gene019217 |
chr3.2 | mRNA | 39410585 | 39444396 | 39410585 | ID=MS.gene019217.t1;Parent=MS.gene019217 |
chr3.2 | exon | 39444212 | 39444396 | 39444212 | ID=MS.gene019217.t1.exon1;Parent=MS.gene019217.t1 |
chr3.2 | CDS | 39444212 | 39444396 | 39444212 | ID=cds.MS.gene019217.t1;Parent=MS.gene019217.t1 |
chr3.2 | exon | 39432147 | 39432230 | 39432147 | ID=MS.gene019217.t1.exon2;Parent=MS.gene019217.t1 |
chr3.2 | CDS | 39432147 | 39432230 | 39432147 | ID=cds.MS.gene019217.t1;Parent=MS.gene019217.t1 |
chr3.2 | exon | 39415500 | 39415599 | 39415500 | ID=MS.gene019217.t1.exon3;Parent=MS.gene019217.t1 |
chr3.2 | CDS | 39415500 | 39415599 | 39415500 | ID=cds.MS.gene019217.t1;Parent=MS.gene019217.t1 |
chr3.2 | exon | 39414120 | 39414161 | 39414120 | ID=MS.gene019217.t1.exon4;Parent=MS.gene019217.t1 |
chr3.2 | CDS | 39414120 | 39414161 | 39414120 | ID=cds.MS.gene019217.t1;Parent=MS.gene019217.t1 |
chr3.2 | exon | 39413991 | 39414032 | 39413991 | ID=MS.gene019217.t1.exon5;Parent=MS.gene019217.t1 |
chr3.2 | CDS | 39413991 | 39414032 | 39413991 | ID=cds.MS.gene019217.t1;Parent=MS.gene019217.t1 |
chr3.2 | exon | 39410748 | 39410878 | 39410748 | ID=MS.gene019217.t1.exon6;Parent=MS.gene019217.t1 |
chr3.2 | CDS | 39410748 | 39410878 | 39410748 | ID=cds.MS.gene019217.t1;Parent=MS.gene019217.t1 |
chr3.2 | exon | 39410585 | 39410675 | 39410585 | ID=MS.gene019217.t1.exon7;Parent=MS.gene019217.t1 |
chr3.2 | CDS | 39410585 | 39410675 | 39410585 | ID=cds.MS.gene019217.t1;Parent=MS.gene019217.t1 |
Gene Sequence |
Protein sequence |