AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene019414

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene019414.t1 MTR_8g033220 98.333 60 1 0 1 60 1 60 1.60e-37 124
MS.gene019414.t1 MTR_8g033220 98.333 60 1 0 1 60 1 60 1.81e-37 124
MS.gene019414.t1 MTR_7g075870 95.000 60 3 0 1 60 1 60 4.00e-37 122
MS.gene019414.t1 MTR_7g075870 95.000 60 3 0 1 60 1 60 4.20e-37 122
MS.gene019414.t1 MTR_4g102530 88.333 60 7 0 1 60 1 60 6.53e-33 112
MS.gene019414.t1 MTR_3g005530 78.333 60 13 0 1 60 1 60 4.85e-29 102
MS.gene019414.t1 MTR_3g452380 78.333 60 13 0 1 60 16 75 6.67e-29 102
MS.gene019414.t1 MTR_2g017865 81.034 58 11 0 3 60 18 75 1.14e-28 102
MS.gene019414.t1 MTR_8g087860 81.034 58 11 0 3 60 19 76 1.35e-28 101
MS.gene019414.t1 MTR_5g046870 74.576 59 15 0 1 59 1 59 3.32e-28 97.4
MS.gene019414.t1 MTR_8g033270 77.966 59 13 0 1 59 1 59 7.98e-28 100
MS.gene019414.t1 MTR_8g097090 76.667 60 14 0 1 60 1 60 9.56e-28 99.8
MS.gene019414.t1 MTR_6g015975 76.667 60 14 0 1 60 1 60 1.11e-27 99.8
MS.gene019414.t1 MTR_7g016600 75.000 60 15 0 1 60 1 60 1.27e-27 99.4
MS.gene019414.t1 MTR_3g084980 76.667 60 14 0 1 60 1 60 1.55e-27 99.0
MS.gene019414.t1 MTR_7g075850 76.667 60 14 0 1 60 1 60 1.84e-27 99.0
MS.gene019414.t1 MTR_4g109810 73.333 60 16 0 1 60 1 60 2.16e-27 98.6
MS.gene019414.t1 MTR_2g461710 71.667 60 17 0 1 60 1 60 3.12e-27 93.2
MS.gene019414.t1 MTR_5g066960 68.852 61 19 0 1 61 1 61 3.40e-27 93.2
MS.gene019414.t1 MTR_0003s0590 73.333 60 16 0 1 60 1 60 1.74e-25 94.0
MS.gene019414.t1 MTR_2g009890 71.667 60 17 0 1 60 1 60 2.84e-25 94.0
MS.gene019414.t1 MTR_1g053070 71.667 60 17 0 1 60 1 60 3.58e-25 93.2
MS.gene019414.t1 MTR_4g109830 70.000 60 18 0 1 60 1 60 6.39e-25 92.0
MS.gene019414.t1 MTR_1g101970 68.333 60 19 0 1 60 1 60 3.90e-24 89.0
MS.gene019414.t1 MTR_4g036050 67.797 59 19 0 1 59 1 59 4.20e-24 88.6
MS.gene019414.t1 MTR_6g464720 68.333 60 19 0 1 60 1 60 4.80e-24 90.1
MS.gene019414.t1 MTR_4g036050 67.797 59 19 0 1 59 1 59 4.89e-24 88.6
MS.gene019414.t1 MTR_4g093030 68.852 61 19 0 1 61 1 61 5.10e-24 87.8
MS.gene019414.t1 MTR_5g066180 66.667 60 20 0 1 60 1 60 6.33e-24 89.4
MS.gene019414.t1 MTR_5g032150 67.797 59 19 0 1 59 1 59 1.24e-23 88.6
MS.gene019414.t1 MTR_3g113030 67.797 59 19 0 1 59 1 59 1.27e-23 88.6
MS.gene019414.t1 MTR_5g032520 67.797 59 19 0 1 59 1 59 1.65e-23 88.2
MS.gene019414.t1 MTR_7g016630 68.333 60 19 0 1 60 1 60 1.74e-23 89.0
MS.gene019414.t1 MTR_8g066260 72.881 59 16 0 1 59 1 59 5.33e-23 87.4
MS.gene019414.t1 MTR_3g088615 61.017 59 23 0 1 59 1 59 8.22e-23 85.5
MS.gene019414.t1 MTR_5g031000 63.333 60 22 0 1 60 1 60 1.14e-22 86.3
MS.gene019414.t1 MTR_4g036050 67.797 59 19 0 1 59 1 59 1.29e-22 85.1
MS.gene019414.t1 MTR_5g031000 63.333 60 22 0 1 60 1 60 1.31e-22 86.3
MS.gene019414.t1 MTR_4g036050 67.797 59 19 0 1 59 1 59 2.96e-22 84.3
MS.gene019414.t1 MTR_4g084740 62.295 61 23 0 1 61 1 61 6.01e-22 85.9
MS.gene019414.t1 MTR_4g093970 65.000 60 21 0 1 60 27 86 7.90e-22 84.3
MS.gene019414.t1 MTR_1g029670 55.932 59 26 0 1 59 1 59 1.60e-21 82.0
MS.gene019414.t1 MTR_3g102570 67.213 61 20 0 1 61 1 61 2.06e-21 84.3
MS.gene019414.t1 MTR_5g046790 66.102 59 20 0 1 59 1 59 4.15e-20 79.0
MS.gene019414.t1 MTR_1g041615 73.469 49 13 0 13 61 17 65 4.63e-20 77.0
MS.gene019414.t1 MTR_5g021270 61.017 59 23 0 1 59 1 59 2.60e-19 77.4
MS.gene019414.t1 MTR_5g021270 61.017 59 23 0 1 59 1 59 2.88e-19 77.4
MS.gene019414.t1 MTR_1g038300 61.017 59 23 0 1 59 1 59 9.72e-19 75.9
MS.gene019414.t1 MTR_8g079502 56.897 58 25 0 1 58 1 58 2.61e-17 71.2
MS.gene019414.t1 MTR_1g047550 56.897 58 25 0 1 58 1 58 5.55e-17 70.5
MS.gene019414.t1 MTR_1g054265 55.172 58 26 0 1 58 1 58 6.94e-17 69.7
MS.gene019414.t1 MTR_2g030740 58.929 56 23 0 3 58 10 65 9.90e-17 70.9
MS.gene019414.t1 MTR_1g108580 57.143 56 24 0 3 58 10 65 1.00e-16 70.5
MS.gene019414.t1 MTR_1g108510 55.357 56 25 0 3 58 10 65 1.58e-16 70.1
MS.gene019414.t1 MTR_1g063160 53.448 58 27 0 1 58 1 58 1.84e-16 68.9
MS.gene019414.t1 MTR_8g086290 55.357 56 25 0 3 58 13 68 1.85e-16 68.9
MS.gene019414.t1 MTR_3g030770 55.357 56 25 0 3 58 10 65 2.05e-16 69.7
MS.gene019414.t1 MTR_7g028448 66.667 45 15 0 14 58 24 68 1.31e-15 66.6
MS.gene019414.t1 MTR_4g036915 66.667 45 15 0 14 58 24 68 1.31e-15 66.6
MS.gene019414.t1 MTR_2g105290 53.448 58 27 0 1 58 11 68 1.36e-15 66.6
MS.gene019414.t1 MTR_3g052870 55.357 56 25 0 3 58 10 65 1.48e-15 67.4
MS.gene019414.t1 MTR_8g051580 53.448 58 27 0 1 58 1 58 1.84e-15 66.6
MS.gene019414.t1 MTR_1g012570 55.357 56 25 0 3 58 10 65 2.08e-15 67.4
MS.gene019414.t1 MTR_5g053390 57.143 56 24 0 3 58 10 65 2.10e-15 67.4
MS.gene019414.t1 MTR_8g043650 55.357 56 25 0 3 58 10 65 2.24e-15 67.0
MS.gene019414.t1 MTR_1g105910 55.357 56 25 0 3 58 10 65 2.46e-15 67.0
MS.gene019414.t1 MTR_0121s0100 51.786 56 27 0 3 58 10 65 2.52e-15 65.1
MS.gene019414.t1 MTR_3g052920 57.143 56 24 0 3 58 10 65 2.89e-15 67.0
MS.gene019414.t1 MTR_1g075600 55.357 56 25 0 3 58 10 65 2.94e-15 67.0
MS.gene019414.t1 MTR_1g077360 55.357 56 25 0 3 58 10 65 3.10e-15 66.6
MS.gene019414.t1 MTR_1g105920 55.357 56 25 0 3 58 10 65 4.32e-15 66.2
MS.gene019414.t1 MTR_5g041650 52.830 53 25 0 1 53 38 90 4.60e-15 67.4
MS.gene019414.t1 MTR_4g131030 53.448 58 27 0 1 58 1 58 4.70e-15 65.9
MS.gene019414.t1 MTR_4g094638 49.153 59 30 0 1 59 1 59 5.07e-15 65.1
MS.gene019414.t1 MTR_2g093190 53.571 56 26 0 3 58 10 65 5.53e-15 65.9
MS.gene019414.t1 MTR_2g085250 53.571 56 26 0 3 58 10 65 7.20e-15 65.9
MS.gene019414.t1 MTR_2g085280 53.571 56 26 0 3 58 10 65 7.91e-15 65.9
MS.gene019414.t1 MTR_4g094632 47.458 59 31 0 1 59 1 59 8.62e-15 64.3
MS.gene019414.t1 MTR_5g045560 55.357 56 25 0 3 58 10 65 1.03e-14 65.5
MS.gene019414.t1 MTR_1g106070 51.786 56 27 0 3 58 10 65 1.62e-14 63.9
MS.gene019414.t1 MTR_5g055100 53.571 56 26 0 3 58 10 65 3.00e-14 64.3
MS.gene019414.t1 MTR_4g108720 50.943 53 26 0 1 53 1 53 6.03e-14 64.3
MS.gene019414.t1 MTR_8g046350 46.552 58 31 0 1 58 1 58 5.90e-13 59.7
MS.gene019414.t1 MTR_0121s0080 50.000 54 27 0 5 58 12 65 7.37e-13 60.5
MS.gene019414.t1 MTR_3g030780 48.214 56 29 0 3 58 10 65 9.84e-13 58.5
MS.gene019414.t1 MTR_3g067875 52.083 48 23 0 11 58 1 48 2.50e-12 55.8
MS.gene019414.t1 MTR_4g127140 59.091 44 18 0 15 58 25 68 2.89e-12 58.2
MS.gene019414.t1 MTR_3g080940 48.214 56 29 0 3 58 10 65 8.46e-12 57.4
MS.gene019414.t1 MTR_6g018920 48.000 50 26 0 1 50 1 50 9.44e-12 58.2
MS.gene019414.t1 MTR_1g105905 54.167 48 22 0 11 58 1 48 1.21e-11 57.0
MS.gene019414.t1 MTR_6g005440 48.000 50 26 0 1 50 1 50 2.64e-11 56.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene019414.t1 AT2G45660 93.333 60 4 0 1 60 1 60 3.97e-37 121
MS.gene019414.t1 AT4G11880 93.333 60 4 0 1 60 1 60 1.20e-36 120
MS.gene019414.t1 AT4G11880 93.333 60 4 0 1 60 1 60 1.20e-36 120
MS.gene019414.t1 AT2G45660 93.333 60 4 0 1 60 1 60 2.13e-36 120
MS.gene019414.t1 AT4G11880 93.333 60 4 0 1 60 1 60 4.64e-36 120
MS.gene019414.t1 AT4G11880 93.333 60 4 0 1 60 1 60 4.64e-36 120
MS.gene019414.t1 AT4G22950 90.000 60 6 0 1 60 1 60 1.31e-35 117
MS.gene019414.t1 AT4G22950 90.000 60 6 0 1 60 1 60 9.59e-35 117
MS.gene019414.t1 AT4G22950 90.000 60 6 0 1 60 1 60 9.59e-35 117
MS.gene019414.t1 AT5G62165 83.333 60 10 0 1 60 1 60 3.67e-33 110
MS.gene019414.t1 AT5G62165 83.333 60 10 0 1 60 1 60 3.67e-33 110
MS.gene019414.t1 AT5G62165 83.333 60 10 0 1 60 1 60 3.67e-33 110
MS.gene019414.t1 AT5G62165 83.333 60 10 0 1 60 1 60 3.67e-33 110
MS.gene019414.t1 AT5G62165 83.333 60 10 0 1 60 1 60 3.67e-33 110
MS.gene019414.t1 AT5G62165 83.333 60 10 0 1 60 1 60 4.62e-33 110
MS.gene019414.t1 AT5G62165 83.333 60 10 0 1 60 1 60 4.62e-33 110
MS.gene019414.t1 AT5G62165 83.333 60 10 0 1 60 1 60 4.62e-33 110
MS.gene019414.t1 AT5G62165 83.333 60 10 0 1 60 1 60 5.62e-33 108
MS.gene019414.t1 AT5G62165 83.333 60 10 0 1 60 1 60 2.49e-32 110
MS.gene019414.t1 AT5G62165 83.333 60 10 0 1 60 1 60 2.49e-32 110
MS.gene019414.t1 AT5G62165 83.333 60 10 0 1 60 1 60 3.31e-32 110
MS.gene019414.t1 AT5G62165 83.333 60 10 0 1 60 1 60 3.31e-32 110
MS.gene019414.t1 AT5G62165 83.333 60 10 0 1 60 1 60 3.31e-32 110
MS.gene019414.t1 AT4G09960 80.000 60 12 0 1 60 1 60 4.24e-30 105
MS.gene019414.t1 AT4G09960 80.000 60 12 0 1 60 1 60 5.37e-30 105
MS.gene019414.t1 AT4G09960 80.000 60 12 0 1 60 2 61 5.43e-30 105
MS.gene019414.t1 AT4G09960 80.000 60 12 0 1 60 11 70 7.63e-30 105
MS.gene019414.t1 AT4G09960 80.000 60 12 0 1 60 27 86 1.70e-29 104
MS.gene019414.t1 AT4G09960 80.000 60 12 0 1 60 96 155 5.02e-29 104
MS.gene019414.t1 AT3G58780 77.966 59 13 0 3 61 18 76 5.76e-29 102
MS.gene019414.t1 AT2G03710 75.000 60 15 0 1 60 1 60 2.15e-28 99.8
MS.gene019414.t1 AT2G42830 77.586 58 13 0 3 60 18 75 2.37e-28 101
MS.gene019414.t1 AT2G42830 77.586 58 13 0 3 60 18 75 2.55e-28 101
MS.gene019414.t1 AT2G45650 79.661 59 12 0 1 59 1 59 2.80e-28 101
MS.gene019414.t1 AT3G58780 77.586 58 13 0 3 60 18 75 3.71e-28 100
MS.gene019414.t1 AT4G18960 79.310 58 12 0 3 60 19 76 4.07e-28 100
MS.gene019414.t1 AT3G58780 77.586 58 13 0 3 60 24 81 4.29e-28 100
MS.gene019414.t1 AT3G58780 77.586 58 13 0 3 60 18 75 5.93e-28 100
MS.gene019414.t1 AT5G51860 76.667 60 14 0 1 60 1 60 6.43e-28 99.0
MS.gene019414.t1 AT3G58780 77.586 58 13 0 3 60 18 75 7.40e-28 100
MS.gene019414.t1 AT5G51860 76.667 60 14 0 1 60 1 60 8.01e-28 99.0
MS.gene019414.t1 AT1G24260 76.667 60 14 0 1 60 1 60 1.05e-27 99.4
MS.gene019414.t1 AT2G03710 75.000 60 15 0 1 60 1 60 1.06e-27 99.8
MS.gene019414.t1 AT2G03710 75.000 60 15 0 1 60 1 60 1.09e-27 99.8
MS.gene019414.t1 AT1G24260 76.667 60 14 0 1 60 1 60 1.37e-27 99.4
MS.gene019414.t1 AT1G24260 76.667 60 14 0 1 60 1 60 1.47e-27 99.4
MS.gene019414.t1 AT3G02310 75.000 60 15 0 1 60 1 60 1.95e-27 97.8
MS.gene019414.t1 AT5G51870 73.770 61 16 0 1 61 1 61 2.89e-27 96.7
MS.gene019414.t1 AT5G51870 73.770 61 16 0 1 61 24 84 8.42e-27 95.9
MS.gene019414.t1 AT3G57230 73.333 60 16 0 1 60 1 60 8.97e-27 94.7
MS.gene019414.t1 AT5G51870 73.770 61 16 0 1 61 1 61 9.04e-27 96.3
MS.gene019414.t1 AT5G51870 73.770 61 16 0 1 61 1 61 2.04e-26 95.5
MS.gene019414.t1 AT5G51870 73.770 61 16 0 1 61 11 71 2.58e-26 95.5
MS.gene019414.t1 AT3G02310 75.000 60 15 0 1 60 1 60 3.28e-26 95.9
MS.gene019414.t1 AT5G15800 76.667 60 14 0 1 60 1 60 6.91e-26 95.1
MS.gene019414.t1 AT5G15800 76.667 60 14 0 1 60 1 60 8.04e-26 95.1
MS.gene019414.t1 AT5G13790 75.000 60 15 0 1 60 1 60 1.81e-25 94.4
MS.gene019414.t1 AT5G13790 75.000 60 15 0 1 60 1 60 1.96e-25 94.4
MS.gene019414.t1 AT3G61120 71.186 59 17 0 1 59 1 59 4.70e-25 92.8
MS.gene019414.t1 AT5G60910 70.000 60 18 0 1 60 1 60 4.77e-25 92.8
MS.gene019414.t1 AT3G57390 69.492 59 18 0 1 59 1 59 6.12e-25 92.0
MS.gene019414.t1 AT1G71692 67.797 59 19 0 1 59 1 59 1.11e-24 90.9
MS.gene019414.t1 AT3G57390 69.492 59 18 0 1 59 1 59 1.12e-24 92.0
MS.gene019414.t1 AT3G30260 69.492 59 18 0 1 59 1 59 2.22e-24 90.9
MS.gene019414.t1 AT2G14210 68.333 60 19 0 1 60 1 60 3.18e-24 90.5
MS.gene019414.t1 AT4G37940 68.333 60 19 0 1 60 1 60 3.88e-24 89.7
MS.gene019414.t1 AT4G37940 68.333 60 19 0 1 60 1 60 4.18e-24 88.6
MS.gene019414.t1 AT4G37940 68.333 60 19 0 1 60 1 60 4.89e-24 89.7
MS.gene019414.t1 AT2G22540 70.000 60 18 0 1 60 1 60 6.99e-24 89.7
MS.gene019414.t1 AT2G22540 70.000 60 18 0 1 60 1 60 6.99e-24 89.7
MS.gene019414.t1 AT3G57230 73.333 60 16 0 1 60 1 60 2.23e-23 88.2
MS.gene019414.t1 AT3G57230 73.333 60 16 0 1 60 1 60 2.23e-23 88.2
MS.gene019414.t1 AT4G24540 67.213 61 20 0 1 61 1 61 2.52e-23 87.8
MS.gene019414.t1 AT5G10140 67.797 59 19 0 1 59 1 59 1.97e-22 84.0
MS.gene019414.t1 AT2G22630 65.000 60 21 0 1 60 1 60 2.91e-22 85.1
MS.gene019414.t1 AT2G22630 65.000 60 21 0 1 60 1 60 2.91e-22 85.1
MS.gene019414.t1 AT5G10140 67.797 59 19 0 1 59 1 59 2.92e-22 84.0
MS.gene019414.t1 AT5G10140 67.797 59 19 0 1 59 1 59 3.36e-22 84.0
MS.gene019414.t1 AT5G10140 67.797 59 19 0 1 59 1 59 3.87e-22 84.0
MS.gene019414.t1 AT5G20240 62.069 58 22 0 1 58 1 58 1.19e-21 81.6
MS.gene019414.t1 AT1G69120 69.492 59 18 0 1 59 1 59 1.23e-21 84.0
MS.gene019414.t1 AT2G22540 66.667 57 19 0 1 57 1 57 1.37e-21 83.6
MS.gene019414.t1 AT1G69120 69.492 59 18 0 1 59 1 59 2.44e-21 82.8
MS.gene019414.t1 AT2G14210 68.333 60 19 0 1 60 1 60 3.14e-21 82.4
MS.gene019414.t1 AT5G23260 63.934 61 22 0 1 61 1 61 4.36e-21 82.4
MS.gene019414.t1 AT5G65070 62.712 59 22 0 1 59 1 59 4.66e-21 80.1
MS.gene019414.t1 AT3G54340 66.102 59 20 0 1 59 1 59 4.86e-21 82.0
MS.gene019414.t1 AT1G26310 69.492 59 18 0 1 59 1 59 5.67e-21 82.4
MS.gene019414.t1 AT5G23260 63.934 61 22 0 1 61 1 61 1.05e-20 81.6
MS.gene019414.t1 AT1G22130 67.241 58 19 0 1 58 1 58 1.35e-20 82.4
MS.gene019414.t1 AT5G65070 62.712 59 22 0 1 59 1 59 1.42e-20 80.1
MS.gene019414.t1 AT1G77980 65.517 58 20 0 1 58 1 58 1.98e-20 82.0
MS.gene019414.t1 AT5G23260 63.934 61 22 0 1 61 17 77 2.70e-20 80.5
MS.gene019414.t1 AT5G23260 63.934 61 22 0 1 61 17 77 2.87e-20 80.5
MS.gene019414.t1 AT5G65070 62.712 59 22 0 1 59 1 59 2.97e-20 79.7
MS.gene019414.t1 AT5G65070 62.712 59 22 0 1 59 1 59 3.92e-20 79.7
MS.gene019414.t1 AT5G65070 62.712 59 22 0 1 59 1 59 5.30e-20 79.3
MS.gene019414.t1 AT5G65050 59.322 59 24 0 1 59 1 59 1.53e-19 77.0
MS.gene019414.t1 AT5G65050 59.322 59 24 0 1 59 1 59 3.24e-19 76.3
MS.gene019414.t1 AT5G65050 59.322 59 24 0 1 59 1 59 3.67e-19 76.3
MS.gene019414.t1 AT5G65050 59.322 59 24 0 1 59 1 59 3.96e-19 76.3
MS.gene019414.t1 AT5G20240 63.158 57 21 0 1 57 1 57 8.26e-19 75.9
MS.gene019414.t1 AT5G65060 55.932 59 26 0 1 59 1 59 8.47e-18 72.8
MS.gene019414.t1 AT5G65060 55.932 59 26 0 1 59 1 59 1.15e-17 72.4
MS.gene019414.t1 AT5G65060 55.932 59 26 0 1 59 1 59 1.24e-17 72.4
MS.gene019414.t1 AT1G31140 55.000 60 27 0 1 60 1 60 1.35e-17 72.8
MS.gene019414.t1 AT4G37435 57.895 57 24 0 1 57 1 57 4.70e-17 70.9
MS.gene019414.t1 AT1G18750 54.386 57 26 0 1 57 1 57 8.85e-17 72.4
MS.gene019414.t1 AT1G18750 54.386 57 26 0 1 57 1 57 9.52e-17 72.4
MS.gene019414.t1 AT1G18750 54.386 57 26 0 1 57 1 57 1.05e-16 72.0
MS.gene019414.t1 AT5G65080 55.932 59 26 0 1 59 8 66 1.18e-16 69.7
MS.gene019414.t1 AT5G65080 55.932 59 26 0 1 59 8 66 1.61e-16 69.7
MS.gene019414.t1 AT1G77950 58.621 58 24 0 1 58 1 58 2.34e-16 70.1
MS.gene019414.t1 AT1G77950 58.621 58 24 0 1 58 1 58 2.34e-16 70.1
MS.gene019414.t1 AT1G77950 58.621 58 24 0 1 58 1 58 2.34e-16 70.1
MS.gene019414.t1 AT1G77950 58.621 58 24 0 1 58 1 58 2.34e-16 70.1
MS.gene019414.t1 AT3G66656 51.724 58 28 0 1 58 1 58 3.96e-16 68.2
MS.gene019414.t1 AT1G01530 55.357 56 25 0 3 58 8 63 4.39e-16 69.3
MS.gene019414.t1 AT1G31140 55.000 60 27 0 1 60 1 60 7.24e-16 68.2
MS.gene019414.t1 AT2G34440 50.000 58 29 0 1 58 1 58 1.19e-15 67.0
MS.gene019414.t1 AT2G03060 54.717 53 24 0 1 53 1 53 5.76e-15 67.0
MS.gene019414.t1 AT2G03060 54.717 53 24 0 1 53 1 53 5.76e-15 67.0
MS.gene019414.t1 AT2G03060 54.717 53 24 0 1 53 1 53 5.76e-15 67.0
MS.gene019414.t1 AT2G03060 54.717 53 24 0 1 53 1 53 9.23e-15 66.6
MS.gene019414.t1 AT1G77080 59.322 59 24 0 1 59 1 59 9.53e-15 64.3
MS.gene019414.t1 AT1G77080 59.322 59 24 0 1 59 1 59 9.84e-15 64.7
MS.gene019414.t1 AT5G60440 53.571 56 26 0 3 58 8 63 1.34e-14 65.9
MS.gene019414.t1 AT1G77080 59.322 59 24 0 1 59 1 59 1.48e-14 63.5
MS.gene019414.t1 AT4G36590 57.143 56 24 0 3 58 8 63 1.69e-14 65.1
MS.gene019414.t1 AT1G77080 59.322 59 24 0 1 59 1 59 2.20e-14 63.9
MS.gene019414.t1 AT1G77080 59.322 59 24 0 1 59 1 59 3.44e-14 63.5
MS.gene019414.t1 AT1G77080 59.322 59 24 0 1 59 1 59 4.64e-14 63.5
MS.gene019414.t1 AT1G72350 56.140 57 25 0 3 59 44 100 5.33e-14 63.5
MS.gene019414.t1 AT1G69540 50.943 53 26 0 1 53 1 53 5.51e-14 64.3
MS.gene019414.t1 AT1G69540 50.943 53 26 0 1 53 1 53 9.23e-14 63.5
MS.gene019414.t1 AT2G24840 53.571 56 26 0 3 58 64 119 1.81e-13 62.4
MS.gene019414.t1 AT1G65360 48.214 56 29 0 3 58 8 63 4.11e-13 61.2
MS.gene019414.t1 AT3G04100 48.148 54 28 0 5 58 17 70 1.62e-12 59.3
MS.gene019414.t1 AT1G47760 46.552 58 31 0 1 58 1 58 2.54e-12 58.5
MS.gene019414.t1 AT2G26320 52.000 50 24 0 1 50 17 66 1.39e-11 55.1
MS.gene019414.t1 AT1G28460 49.123 57 29 0 3 59 9 65 1.55e-11 56.2
MS.gene019414.t1 AT1G29962 51.923 52 25 0 8 59 14 65 4.03e-11 55.1

Find 7 sgRNAs with CRISPR-Local

Find 10 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATTCTCAAAGAGGAGAAA+TGG 0.421788 8.2:-64050864 MS.gene019414:CDS
TTTATGAATTTGCTAGCTCT+AGG 0.521973 8.2:-64050761 MS.gene019414:CDS
AATTCATAAAGCCTCCCTCT+TGG 0.547865 8.2:+64050774 None:intergenic
ATCAGTGTTGTGTGATGCTG+AGG 0.567431 8.2:-64050817 MS.gene019414:CDS
GGCAAGTAACATTCTCAAAG+AGG 0.594159 8.2:-64050872 MS.gene019414:CDS
ACACAACACTGATAACTCAA+AGG 0.620897 8.2:+64050827 None:intergenic
GTATAGAGAACGCAACAAGT+AGG 0.642404 8.2:-64050893 MS.gene019414:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! TTATTGTTTTCTCACCAAGA+GGG - chr8.2:64050891-64050910 MS.gene019414:CDS 30.0%
!! TTTATGAATTTGCTAGCTCT+AGG - chr8.2:64050918-64050937 MS.gene019414:CDS 30.0%
ACACAACACTGATAACTCAA+AGG + chr8.2:64050855-64050874 None:intergenic 35.0%
ACATTCTCAAAGAGGAGAAA+TGG - chr8.2:64050815-64050834 MS.gene019414:CDS 35.0%
! CTTATTGTTTTCTCACCAAG+AGG - chr8.2:64050890-64050909 MS.gene019414:CDS 35.0%
AATTCATAAAGCCTCCCTCT+TGG + chr8.2:64050908-64050927 None:intergenic 40.0%
GGCAAGTAACATTCTCAAAG+AGG - chr8.2:64050807-64050826 MS.gene019414:CDS 40.0%
GTATAGAGAACGCAACAAGT+AGG - chr8.2:64050786-64050805 MS.gene019414:CDS 40.0%
ATCAGTGTTGTGTGATGCTG+AGG - chr8.2:64050862-64050881 MS.gene019414:CDS 45.0%
! TTGTTTTCTCACCAAGAGGG+AGG - chr8.2:64050894-64050913 MS.gene019414:CDS 45.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 64050758 64050943 64050758 ID=MS.gene019414
chr8.2 mRNA 64050758 64050943 64050758 ID=MS.gene019414.t1;Parent=MS.gene019414
chr8.2 exon 64050758 64050943 64050758 ID=MS.gene019414.t1.exon1;Parent=MS.gene019414.t1
chr8.2 CDS 64050758 64050943 64050758 ID=cds.MS.gene019414.t1;Parent=MS.gene019414.t1
Gene Sequence

>MS.gene019414

ATGGTGAGAGGAAAGACACAAATGAAGCGTATAGAGAACGCAACAAGTAGGCAAGTAACATTCTCAAAGAGGAGAAATGGTTTGTTGAAGAAAGCCTTTGAGTTATCAGTGTTGTGTGATGCTGAGGTTGCTCTTATTGTTTTCTCACCAAGAGGGAGGCTTTATGAATTTGCTAGCTCTAGGTAA
Protein sequence

>MS.gene019414.t1

MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASSR